CmaCh04G022210.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G022210.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	Cma_Chr04 : 15495048 .. 15498830 (+)
Sequence length	1399

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAAATTTCTTCTGCAAATTGGGGAAAATAAAGCCGGTTCTGTCGCCTCCACTCCAATACTCCATATCCCTCGAAGCGCTTCTTCCCAATTCATTTTTCGCCGCGGAAGGCTTCGATTGTTTCCCGTCGAAGATGCTGAGGGTTGCGGCTCGTAGGCTCTCTTCACTCTCTTCTTCCCATTTCAGGCCCTCTATTGCCCCTTCCTTGCCCGGTTCTCACAAGATCGTTGATGGCGGTGATTCTGCCCCATCCAATGATTTCAGATCCGTCAGCTCTTTCAACACCTTCGCTTTTGGATCCAACTTTGCTCCTAATTGTCGAGGTTACATTTTGCTCCCCTGTTCTCTGAAATACTTTTGTTCTCTCTGCGCCTAGTTGATTTATGGCGTTTTTTAGGGTTTGTTTTGGTGGAGATGTGATGTCTTTTGTTGAAATTTGTTTTTGGGAAGGGAAATCCTTATTTAGTATTCGACCTGTAGTTTTGTTGCGATAACCGTGTTTAGCTGTAGATGGGGATTGATAATGGTCTTTACCGATCTACTGTTTAGTTGCATTCATGATGATGAATCATGTTTTGTATACTCATTTTTTCATTGTGAAAATAATTTAAAATTTTGAGGCTTGTTTACAGGATATATGTTGGGGCATATCACTTAGTCGAATCAATCACTTCCTCTTGGTGTTCATGTTTGAATCTTCCACTGTTGCTTTTCAAAGTTTTGAACTTGTTTTTATCATCAGGTTTGCATATTTGTTTCTCATTCTGGAAATATTGTGAAAATGTGAAATGTTATCTAAAAACCGTATTTTCGCAGCAATTCGATGATATCTCTTTGTTGAATCATCCCCTTTTCGTTTATTTTATAATCTTTTCACCGTTGCTCTACAAATTCTACGAAACTTTCAACATATTTTTTTTTTGTAAATATTTTTTATTCTTTCTTTCATTTTTCTTTCATTGAAAAGTGTGATTTTAGCCCATTCGAGTGCATAAGTTTAAGTGTGAGTTTTCTTTTTTCCTTTTCCGTAATGGAGGTTAAAACAAATTAGTTTAAGGTTTTCTGTATTATCTGTGCCGATAAAGTTCAGAGCATTCGTCCATTTTAAGCACTCACCCAATCTTGATTAACGGATGATATGCAACATTGTAGAGGGAGTATAGTAATTATTTCAAAAGAACATTCAGTGCACTAATTCATTTTTAATAAACGGATGTTATACGGGCTGCAGTGATTGGGGTGTATTGTTATTGGAAGAATGGATTTGTTATTTACGAACTTTTAGCAGTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTGAGATGAGAAACAACTTTTTATTGATACCTAAGGAGTTACGATGGTACTAAAATATTAGTAATAAAAAAAAAAAAGGTTCATTTAGGAGCTTGTTCAAAGGAATCTAGCTACTTGAAATAACATTTACTAAAGGGCCAAGATTTTGAGAATTTAGGCACCTAAAAAAGAAGCATTTGTTATAAACACCTAAGATCGGGCATTTCCCTAGTCCACACCCTTATGGACCATACAATTAAAAAGACAGAAAGAAAATAAATGAAAGTCAAAACCAGCAAGAGCAGGTGACTCAAGGTATGCCATTGCCCTTCTCTCTTGACAGACATTTGAGACTTTGTTGGGGGAGGTCGAGTTACATAAACCAGGAGAAGAATTTATAGTTATTAAAAAGAAGGAATGAAATCAGTCATAGAAATAGGAGTTTGTATTACTTGGTTGAGGCTTGGGAAGAGTTCTAGATATGATTCTTTCTGACATGCATTGGCTTTGGGCGTCGAAATTCTATATTAGCTCATTAGTCATGATGTGATCATGGGCTTATTGTGGTCTTTTGGTTTGTGTTATAGAGGTCTATGAAGTTGTGTTCCCATGGTTGCTAGTGCCAATTCTAATAGGCTCTTATCAGGCCATAAGAACCTCGTAGGTGTCTTGTAGGTGCAAAATATTGCTAGGAAGAACCATCCTCAGCCTATCATCCTACACCTTGGCAATGGTTTCATACAAGCTAGTTCCAAGCTGATTAGTATATAATCCAAATCTCTTGTGATCAAATCTTAATTTTCAAGATCAAAAGCCAATGGAACCATCATGGCTGAGAACCTTGCTATTGATTGTTATCAAAGCTGAAATCATCGAGCCTTTAACCTTTTCTACCCTTCTCTAGAATAGGATACTGATTAAAACCTTCCTCAAACCTTTATGCGACTGTTTAGAGTTTTATTTCCTAATCTTGTATGTAAGTCATCAATAGAAATGTTGGCCAGAAATTTTTTAGCACTCTCTGGAAACAGTTTGAGGCCCACTTATAACTTCCCCTGGAGAACGTGTACTAGCATGTTATTATTTGGTATTGTGTTTGTTTGGTACTAATTAAATGAAAAAGGGCTTCAAAACTGAATGGTTTGGACTCTGACTTTAACAATTAGTAGGTTTAGATGTTGAACATTCTGCCCAATGCAATTGATTGGATGACTGCATTTCAATCGTATTTTGTGATTCAGGTTTTTTGTTATGAATGATTCTTTCTTTCTCCTGTAGTGAAGTTTTATGATTGAATAGAATAACTCTTTTCCAGGTTTCGCTTCTGATGCCTTGACTTCAATGGGCGAAAACAACTTAGTTCCAGATGTTCCTGCAACTGTTGCAGCCGTTAAGAATCCTACTTCAAAGATAGTGTATGATGAATACAATCATGAGCGATTTCCTCCGGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTCTTGTCAGGCGGTCGGTTTGTCTATGCTTCTTTGATTCGCCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTTCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTCTTTATCAGGCGACGAACTGAAGATGATATTAAGATAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTCAAGGATCCAGAATGGCTTATCGTTATTGGTGTTTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCCGGTGATTTTGGTGGGTGGTTTTGCCCGTGCCATGGTTCCCATTACGACATCTCCGGTAGGATCCGTAAAGGACCAGCGCCATACAATTTGGAGGTACCCACCTATACCTTTTTGGATGAAAACAAGCTTTTGATTGGTTAAGAAATCAAGCTCTTTTTCTGGGTTTGTAGTAGTGGTTTGGAACATTCATCTATGATAATGTCTTGAAGATTTGTTGCAGGCATTTTATTATTTTTCTACTCAATTCTGATTTGATGTTTATGTTGTGAGAAAACTGTAACTCCCGTCTATTGGTGGTGCATGAATGCATCTGAATAAGTTGCTTTGCTTGAATGGGGTGTTTCCCTATGAAGTAAGCTCTTCTGATTTTGGGAATAGACTTGATAGTGAAATGGAAACTAAAATTTCTTTGTATGATTTGCATCTACCATTATTGCTATACAAGTCTACAAAATTTTCTTCCGGGGTGTTTGGATTGATTAGTTGAGCAGATTTAATTTTAAATTTTACTTTCGAGTTCTGATAACATGTGGGGTGGATGGATTCGAACATTTGGTTGCATCTCATCTGGAT

mRNA sequence

GTCAAATTTCTTCTGCAAATTGGGGAAAATAAAGCCGGTTCTGTCGCCTCCACTCCAATACTCCATATCCCTCGAAGCGCTTCTTCCCAATTCATTTTTCGCCGCGGAAGGCTTCGATTGTTTCCCGTCGAAGATGCTGAGGGTTGCGGCTCGTAGGCTCTCTTCACTCTCTTCTTCCCATTTCAGGCCCTCTATTGCCCCTTCCTTGCCCGGTTCTCACAAGATCGTTGATGGCGGTGATTCTGCCCCATCCAATGATTTCAGATCCGTCAGCTCTTTCAACACCTTCGCTTTTGGATCCAACTTTGCTCCTAATTGTCGAGGTTTCGCTTCTGATGCCTTGACTTCAATGGGCGAAAACAACTTAGTTCCAGATGTTCCTGCAACTGTTGCAGCCGTTAAGAATCCTACTTCAAAGATAGTGTATGATGAATACAATCATGAGCGATTTCCTCCGGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTCTTGTCAGGCGGTCGGTTTGTCTATGCTTCTTTGATTCGCCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTTCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTCTTTATCAGGCGACGAACTGAAGATGATATTAAGATAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTCAAGGATCCAGAATGGCTTATCGTTATTGGTGTTTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCCGGTGATTTTGGTGGGTGGTTTTGCCCGTGCCATGGTTCCCATTACGACATCTCCGGTAGGATCCGTAAAGGACCAGCGCCATACAATTTGGAGGTACCCACCTATACCTTTTTGGATGAAAACAAGCTTTTGATTGGTTAAGAAATCAAGCTCTTTTTCTGGGTTTGTAGTAGTGGTTTGGAACATTCATCTATGATAATGTCTTGAAGATTTGTTGCAGGCATTTTATTATTTTTCTACTCAATTCTGATTTGATGTTTATGTTGTGAGAAAACTGTAACTCCCGTCTATTGGTGGTGCATGAATGCATCTGAATAAGTTGCTTTGCTTGAATGGGGTGTTTCCCTATGAAGTAAGCTCTTCTGATTTTGGGAATAGACTTGATAGTGAAATGGAAACTAAAATTTCTTTGTATGATTTGCATCTACCATTATTGCTATACAAGTCTACAAAATTTTCTTCCGGGGTGTTTGGATTGATTAGTTGAGCAGATTTAATTTTAAATTTTACTTTCGAGTTCTGATAACATGTGGGGTGGATGGATTCGAACATTTGGTTGCATCTCATCTGGAT

Coding sequence (CDS)

ATGCTGAGGGTTGCGGCTCGTAGGCTCTCTTCACTCTCTTCTTCCCATTTCAGGCCCTCTATTGCCCCTTCCTTGCCCGGTTCTCACAAGATCGTTGATGGCGGTGATTCTGCCCCATCCAATGATTTCAGATCCGTCAGCTCTTTCAACACCTTCGCTTTTGGATCCAACTTTGCTCCTAATTGTCGAGGTTTCGCTTCTGATGCCTTGACTTCAATGGGCGAAAACAACTTAGTTCCAGATGTTCCTGCAACTGTTGCAGCCGTTAAGAATCCTACTTCAAAGATAGTGTATGATGAATACAATCATGAGCGATTTCCTCCGGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTCTTGTCAGGCGGTCGGTTTGTCTATGCTTCTTTGATTCGCCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCCCTGGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTTCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTCTTTATCAGGCGACGAACTGAAGATGATATTAAGATAGCAAATAGCGTCGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTCAAGGATCCAGAATGGCTTATCGTTATTGGTGTTTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCCGGTGATTTTGGTGGGTGGTTTTGCCCGTGCCATGGTTCCCATTACGACATCTCCGGTAGGATCCGTAAAGGACCAGCGCCATACAATTTGGAGGTACCCACCTATACCTTTTTGGATGAAAACAAGCTTTTGATTGGTTAA

Protein sequence

MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAPNCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG

Homology

[Close]

BLAST of CmaCh04G022210.1 vs. Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 2.5e-115
Identity = 211/281 (75.09%), Postives = 238/281 (84.70%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPS----LPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGS 60
           MLR+A RR SSLS    R S+APS    +  +H   D   S+P    RS+S     +  S
Sbjct: 1   MLRIAGRRASSLSRWPVR-SVAPSSSAFISANHFSSDDDSSSP----RSISP----SLAS 60

Query: 61  NFAPNCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAF 120
            F  + RGF+S++++   +  LVPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAF
Sbjct: 61  VFLHHTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAF 120

Query: 121 AYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKP 180
           AYFVL+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKP
Sbjct: 121 AYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKP 180

Query: 181 VFIRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGG 240
           VFIRRRTEDDI +ANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGDFGG
Sbjct: 181 VFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGG 240

Query: 241 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           WFCPCHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CmaCh04G022210.1 vs. Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 7.4e-112
Identity = 198/259 (76.45%), Postives = 225/259 (86.87%), Query Frame = 1


Query: 19  PSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAPNCRGFASDALTSMGENNL 78
           PS +  +  +H   D   S+P    RS+S     +  S F  + RGF+S++++   +  L
Sbjct: 8   PSSSAFISANHFSSDDDSSSP----RSISP----SLASVFLHHTRGFSSNSVSPAHDMGL 67

Query: 79  VPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLK 138
           VPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LK
Sbjct: 68  VPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILK 127

Query: 139 FVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKIANSVDIGSL 198
           FVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDI +ANSVD+GSL
Sbjct: 128 FVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSL 187

Query: 199 RDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP 258
           RDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP
Sbjct: 188 RDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP 247

Query: 259 YNLEVPTYTFLDENKLLIG 278
           YNLEVPTY+FL+ENKLLIG
Sbjct: 248 YNLEVPTYSFLEENKLLIG 258

[Close]

BLAST of CmaCh04G022210.1 vs. Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-111
Identity = 206/277 (74.37%), Postives = 235/277 (84.84%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60
           MLRVA RRLSS ++   R S       S  + D  DS+P+   RS S   T    S+F  
Sbjct: 1   MLRVAGRRLSSSAA---RSSSTFFTRSSFTVTD--DSSPA---RSPSPSLT----SSFLD 60

Query: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
             RGF+S++++   +  LV D+PATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFV
Sbjct: 61  QIRGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRT+DDIK+ANSVD+G+LRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of CmaCh04G022210.1 vs. Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.1e-110
Identity = 186/214 (86.92%), Postives = 205/214 (95.79%), Query Frame = 1


Query: 64  GFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 123
           GF+S++++   +  LVPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL+G
Sbjct: 23  GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 82

Query: 124 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 183
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 83  GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 142

Query: 184 EDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 243
           EDDI +ANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 143 EDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 202

Query: 244 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           SHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 203 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236

[Close]

BLAST of CmaCh04G022210.1 vs. Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 7.0e-110
Identity = 199/277 (71.84%), Postives = 229/277 (82.67%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60
           MLR+A R+LSS +++  R S A          D   S          S +  +  S F  
Sbjct: 1   MLRIAGRKLSSSAAT--RSSSAFFTRNPFTFTDDSSSP-------ARSPSPASLASQFLD 60

Query: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
             RGF+S++++   +  LV D+PATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFV
Sbjct: 61  QFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DI +ANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CHGSHYDISGRIRKGPAPYNLEVPTY+F++ENKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CmaCh04G022210.1 vs. TrEMBL
Match: A0A0A0KNC0_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464790 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 3.9e-136
Identity = 243/277 (87.73%), Postives = 257/277 (92.78%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60
           MLRVAARRLSSLSSSHFRP+IA SLP SH I+D  DS   NDFRS   F+TF    +F  
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDS---NDFRSAGFFHTFPIRPHFDR 60

Query: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDALTS  ENNLVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIK+ANSVDIG+LRDPQQDGERVKDPEWL+V+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CmaCh04G022210.1 vs. TrEMBL
Match: A0A0A0KTT3_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464800 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 3.8e-131
Identity = 234/277 (84.48%), Postives = 251/277 (90.61%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60
           MLR+AARRLSSLSSSHFRP+IA S P SH I+D  DS   NDFRS   FNTF   S F  
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDS---NDFRSAGFFNTFPIRSQFDR 60

Query: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           + RGFASDAL S  ++ L+ D+PATVAAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIK+ANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CmaCh04G022210.1 vs. TrEMBL
Match: M5WT51_PRUPE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE_ppa009909mg PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.6e-121
Identity = 223/280 (79.64%), Postives = 246/280 (87.86%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGS---HKIVDGGDSAPSNDFRSVSSFNTFAFGSN 60
           MLRVAARRL SLS+S +RP+ A +   S     ++DG DS  S+D RS+       F ++
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDS--SDDLRSIY------FTTD 60

Query: 61  FAPNCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 120
           F    RGFASD+LT   +NNLVPDVP TVAAVKNPTSKIVYD+YNHER+PPGDPSKRAFA
Sbjct: 61  FYLPSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFA 120

Query: 121 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPV 180
           YFVL+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPV
Sbjct: 121 YFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPV 180

Query: 181 FIRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGW 240
           FIRRRT+DDIK+ANSVD+ SLRDPQQD ERVK+PEWLIV+GVCTHLGCIPLPNAGDFGGW
Sbjct: 181 FIRRRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 240

Query: 241 FCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFLDENKLLIG
Sbjct: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

[Close]

BLAST of CmaCh04G022210.1 vs. TrEMBL
Match: V4U2T2_9ROSI (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Citrus clementina GN=CICLE_v10016224mg PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.2e-119
Identity = 218/279 (78.14%), Postives = 245/279 (87.81%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSN--DFRSVSSFNTFAFGSNF 60
           MLRVAARRL S SSS    S+ P +  S  I++G DS+ S+  DFRS   + +   G  F
Sbjct: 1   MLRVAARRLLSPSSSS---SLRP-IASSRNIINGADSSSSSNDDFRSNGFYGSGYLGPQF 60

Query: 61  APNCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 120
              CRGF+S++LT   E +LVP VPATVAAVKNPTSKIVYDEYNHER+PPGDPSKRAFAY
Sbjct: 61  QLPCRGFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180
           FVL+GGRFVYASLIRLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVF
Sbjct: 121 FVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVF 180

Query: 181 IRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240
           IRRRTE+DIK+AN+VD+GSLRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGDFGGWF
Sbjct: 181 IRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWF 240

Query: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CPCHGSHYDISGRIRKGPAPYNLEVP+Y+FLDENK++IG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMIIG 275

[Close]

BLAST of CmaCh04G022210.1 vs. TrEMBL
Match: A0A067L0B8_JATCU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Jatropha curcas GN=JCGZ_26880 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 5.7e-119
Identity = 217/279 (77.78%), Postives = 241/279 (86.38%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSH--FRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNF 60
           MLRVA RRLSS+ S+   +RP+ A     S   ++ GDS+ S++ +S    + FAF  +F
Sbjct: 1   MLRVAVRRLSSICSTQPSWRPNQAALSIVSSNPINSGDSSSSDEIKSKVLKDYFAFRPHF 60

Query: 61  APNCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 120
            P  RGF+S +LT   E+ ++ DVPATVAAVKNPTSKI YDEYNHERFPPGDPSKRAFAY
Sbjct: 61  HPPQRGFSSGSLTPRNEDGIISDVPATVAAVKNPTSKITYDEYNHERFPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180
           FVL+GGRFVYAS+IRLL+LKFVLSMSASKDVLALASLEVDLS IEPGSTVTVKWRGKPVF
Sbjct: 121 FVLTGGRFVYASVIRLLILKFVLSMSASKDVLALASLEVDLSGIEPGSTVTVKWRGKPVF 180

Query: 181 IRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240
           IRRRTEDDIK+ANSVD+ SLRDPQ D +RVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF
Sbjct: 181 IRRRTEDDIKLANSVDLASLRDPQPDADRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240

Query: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKL+IG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLMIG 279

[Close]

BLAST of CmaCh04G022210.1 vs. TAIR10
Match: AT5G13440.1 (AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 404.8 bits (1039), Expect = 4.2e-113
Identity = 206/279 (73.84%), Postives = 232/279 (83.15%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPS--LPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNF 60
           MLRVA RRL S+S    R S A S  L   H + DGG+S+ ++  RSV S +  +F S  
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSRDHTLSDGGNSSSAS--RSVPSADLSSFNSYH 60

Query: 61  APNCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 120
               RGFAS  +T   E     +VPATV AVK P SKIVYD++NHER+PPGDPSKRAFAY
Sbjct: 61  RSVIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180
           FVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVF
Sbjct: 121 FVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVF 180

Query: 181 IRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240
           IRRRTEDDIK+ANSVD+GSLRDPQ+D  RVK+PEWLIV+GVCTHLGCIPLPNAGD+GGWF
Sbjct: 181 IRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWF 240

Query: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CPCHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of CmaCh04G022210.1 vs. TAIR10
Match: AT5G13430.1 (AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 392.1 bits (1006), Expect = 2.8e-109
Identity = 201/279 (72.04%), Postives = 228/279 (81.72%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGS--HKIVDGGDSAPSNDFRSVSSFNTFAFGSNF 60
           MLRVA RRL S+S    R S A S   S  H + DGG  + S   RS+ S +  ++  + 
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAP-RSLPSADLSSYHRSL 60

Query: 61  APNCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 120
               RGF+S  L    E     +VPATV AVK P SKIVYD++NHER+PPGDPSKRAFAY
Sbjct: 61  I---RGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180
           FVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVF
Sbjct: 121 FVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVF 180

Query: 181 IRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240
           IRRRTEDDIK+ANSVD+GSLRDPQ+D  RVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWF
Sbjct: 181 IRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWF 240

Query: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CPCHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CmaCh04G022210.1 vs. TAIR10
Match: AT4G03280.1 (AT4G03280.1 photosynthetic electron transfer C)

HSP 1 Score: 56.2 bits (134), Expect = 3.7e-08
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 1


Query: 219 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLL 276
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +      +  K+L
Sbjct: 156 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVL 211

[Close]

BLAST of CmaCh04G022210.1 vs. NCBI nr
Match: gi|659072410|ref|XP_008465508.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 500.0 bits (1286), Expect = 2.7e-138
Identity = 247/277 (89.17%), Postives = 259/277 (93.50%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60
           MLR+AARRLSSLSSSHFRP+IA SLPGSH I+D  DS   NDFRS   FNTF  G +F  
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDS---NDFRSGGFFNTFPIGPHFDR 60

Query: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDAL+SM E NLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIK+ANSVDIG+LRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CmaCh04G022210.1 vs. NCBI nr
Match: gi|449452028|ref|XP_004143762.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 492.3 bits (1266), Expect = 5.7e-136
Identity = 243/277 (87.73%), Postives = 257/277 (92.78%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60
           MLRVAARRLSSLSSSHFRP+IA SLP SH I+D  DS   NDFRS   F+TF    +F  
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDS---NDFRSAGFFHTFPIRPHFDR 60

Query: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDALTS  ENNLVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIK+ANSVDIG+LRDPQQDGERVKDPEWL+V+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CmaCh04G022210.1 vs. NCBI nr
Match: gi|659072408|ref|XP_008465498.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 481.9 bits (1239), Expect = 7.6e-133
Identity = 237/277 (85.56%), Postives = 254/277 (91.70%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60
           MLR+AARRLSSLSSSHFRP+IA SLPGSH I+D   SA SNDFRS   FNTF    +F  
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIID---SADSNDFRSAGFFNTFPIRPHFDR 60

Query: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDAL S  ++ L+ D+PATVAAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIK+ANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CmaCh04G022210.1 vs. NCBI nr
Match: gi|449452030|ref|XP_004143763.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 475.7 bits (1223), Expect = 5.5e-131
Identity = 234/277 (84.48%), Postives = 251/277 (90.61%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60
           MLR+AARRLSSLSSSHFRP+IA S P SH I+D  DS   NDFRS   FNTF   S F  
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDS---NDFRSAGFFNTFPIRSQFDR 60

Query: 61  NCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           + RGFASDAL S  ++ L+ D+PATVAAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEDDIK+ANSVDIGSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           CHGSHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CmaCh04G022210.1 vs. NCBI nr
Match: gi|595939955|ref|XP_007215798.1| (hypothetical protein PRUPE_ppa009909mg [Prunus persica])

HSP 1 Score: 442.6 bits (1137), Expect = 5.1e-121
Identity = 223/280 (79.64%), Postives = 246/280 (87.86%), Query Frame = 1


Query: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGS---HKIVDGGDSAPSNDFRSVSSFNTFAFGSN 60
           MLRVAARRL SLS+S +RP+ A +   S     ++DG DS  S+D RS+       F ++
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDS--SDDLRSIY------FTTD 60

Query: 61  FAPNCRGFASDALTSMGENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 120
           F    RGFASD+LT   +NNLVPDVP TVAAVKNPTSKIVYD+YNHER+PPGDPSKRAFA
Sbjct: 61  FYLPSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFA 120

Query: 121 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPV 180
           YFVL+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPV
Sbjct: 121 YFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPV 180

Query: 181 FIRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGW 240
           FIRRRT+DDIK+ANSVD+ SLRDPQQD ERVK+PEWLIV+GVCTHLGCIPLPNAGDFGGW
Sbjct: 181 FIRRRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 240

Query: 241 FCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 278
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFLDENKLLIG
Sbjct: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

The following BLAST results are available for this feature:

BLAST of CmaCh04G022210.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UCRI2_TOBAC	2.5e-115	75.09	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI1_TOBAC	7.4e-112	76.45	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
UCRI_SOLTU	2.2e-111	74.37	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FE...	[more]
UCRI4_TOBAC	3.1e-110	86.92	Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI3_TOBAC	7.0e-110	71.84	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=...	[more]

BLAST of CmaCh04G022210.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNC0_CUCSA	3.9e-136	87.73	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_...	[more]
A0A0A0KTT3_CUCSA	3.8e-131	84.48	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_...	[more]
M5WT51_PRUPE	3.6e-121	79.64	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE...	[more]
V4U2T2_9ROSI	1.2e-119	78.14	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Citrus clementina GN=CI...	[more]
A0A067L0B8_JATCU	5.7e-119	77.78	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Jatropha curcas GN=JCGZ...	[more]

BLAST of CmaCh04G022210.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13440.1	4.2e-113	73.84	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	2.8e-109	72.04	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	3.7e-08	42.11	photosynthetic electron transfer C	[more]

BLAST of CmaCh04G022210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072410\|ref\|XP_008465508.1\|	2.7e-138	89.17	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|449452028\|ref\|XP_004143762.1\|	5.7e-136	87.73	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|659072408\|ref\|XP_008465498.1\|	7.6e-133	85.56	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|449452030\|ref\|XP_004143763.1\|	5.5e-131	84.48	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|595939955\|ref\|XP_007215798.1\|	5.1e-121	79.64	hypothetical protein PRUPE_ppa009909mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004192	Rieske_TM
IPR005805	Rieske_Fe-S_prot_C
IPR006317	Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR014349	Rieske_Fe-S_prot
IPR017941	Rieske_2Fe-2S

Vocabulary: **Molecular Function**
Term	Definition
GO:0008121	ubiquinol-cytochrome-c reductase activity
GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006119	oxidative phosphorylation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0045275	respiratory chain complex III
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G022210	CmaCh04G022210	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G022210.1	CmaCh04G022210.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G022210.1.exon.2	CmaCh04G022210.1.exon.2	exon
CmaCh04G022210.1.exon.1	CmaCh04G022210.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G022210.1.five_prime_UTR.1	CmaCh04G022210.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G022210.1.CDS.1	CmaCh04G022210.1.CDS.1	CDS
CmaCh04G022210.1.CDS.2	CmaCh04G022210.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G022210.1.three_prime_UTR.1	CmaCh04G022210.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	GENE3D	G3DSA:1.20.5.270		coord: 101..137 score: 5.
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 100..148 score: 3.3
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 237..249 score: 3.0E-17coord: 249..261 score: 3.0E-17coord: 215..226 score: 3.0
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAMs	TIGR01416	TIGR01416	coord: 133..277 score: 5.1
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 2..20 score: 7.9E-137coord: 38..277 score: 7.9E
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	GENE3D	G3DSA:2.102.10.10		coord: 138..276 score: 8.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 160..263 score: 1.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROFILE	PS51296	RIESKE	coord: 207..275 score: 18
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	unknown	SSF50022	ISP domain	coord: 139..275 score: 4.06
None	No IPR available	PANTHER	PTHR10134:SF1	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 2..20 score: 7.9E-137coord: 38..277 score: 7.9E
None	No IPR available	unknown	SSF81502	ISP transmembrane anchor	coord: 88..150 score: 4.36