CmaCh04G015180.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G015180.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_673
Location	Cma_Chr04 : 7682761 .. 7683762 (+)
Sequence length	621

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATCAGAGCTCGAGGAAGCGGGATTGGGACGACTTGGCCGACTCGGCTGACTCGGAGGCCGGTTCGCCGGAGGTGAAGCGGCTCAGAGACGACCTCCTAGGTTTTCTCGACGACTCCAATCTAGAACCGGCAACTCCCGATCTCGACTCCTTGATGAGGAGTTTCGAGGAAGAAATTGCCACTGCGTCGTCTTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGTGAGTCTCAGCCGGAGTTAGGCTACCTCTTGGAAGCCTCCGACGACGAGCTTGGTCTACCGCCTTCAGTTACTTCGAATAGCCAACAGGAGTTTGACGAAGCGACCGAGTTTGCTCGAGTAACGACCGATTCGTCTGGGACCAGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTATGACGCTTTCGAACTGGAAGCCGGAGATATGTTCAGCGGCAGCGACGCGGCCGAGTATGTGGGTTTGGATGGGCTGTTGGAGTATTCGAATCTGTGTTCTGATGCGTTGGATAACTCGGATTTTCTCTGGCGGCAAGAATCTCTGCCGGCTCTATAGTTAGAAACGTCGCCGATTAATTAATGTTTTGCGTTAGGAGTAGATACAGATGCCGCAGTTGAATATAGAAATTGGTTCGTTTTTTGTTTCCTTTGTATTTTGGTTACACAGTGGAAATTCTTTTTTGTTCATGGTTATGCTTTCTGGACGCAAGGATAAAAATTAGTTGAAACCTTGAGAATGTTGTTGCCATCCCTTGTTCTCCGTTGTGCTGTGTTTTATCTAACTATTTTATTTGGAATATTGGCGAACCAGGAACGAACAGACTATAAACACGTACGCACCTAACATTTTTTTTTACTTTCCCAAACAGATAGAAAAGAACTTGTTCTTTTACGAGGAACGAACAGAATAAAGGTTAGCGCTACTTGAAGAAGCAGCGGAGCCATTGGGTTCGTCATCGTTGTCATTGTCGTCCGGACATGGTGA

mRNA sequence

ATGGAGAATCAGAGCTCGAGGAAGCGGGATTGGGACGACTTGGCCGACTCGGCTGACTCGGAGGCCGGTTCGCCGGAGGTGAAGCGGCTCAGAGACGACCTCCTAGGTTTTCTCGACGACTCCAATCTAGAACCGGCAACTCCCGATCTCGACTCCTTGATGAGGAGTTTCGAGGAAGAAATTGCCACTGCGTCGTCTTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGTGAGTCTCAGCCGGAGTTAGGCTACCTCTTGGAAGCCTCCGACGACGAGCTTGGTCTACCGCCTTCAGTTACTTCGAATAGCCAACAGGAGTTTGACGAAGCGACCGAGTTTGCTCGAGTAACGACCGATTCGTCTGGGACCAGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTATGACGCTTTCGAACTGGAAGCCGGAGATATGTTCAGCGGCAGCGACGCGGCCGAGTATGTGGGTTTGGATGGGCTGTTGGAGTATTCGAATCTGTGTTCTGATGCGTTGGATAACTCGGATTTTCTCTGGCGGCAAGAATCTCTGCCGGCTCTATACGGAGCCATTGGGTTCGTCATCGTTGTCATTGTCGTCCGGACATGGTGA

Coding sequence (CDS)

ATGGAGAATCAGAGCTCGAGGAAGCGGGATTGGGACGACTTGGCCGACTCGGCTGACTCGGAGGCCGGTTCGCCGGAGGTGAAGCGGCTCAGAGACGACCTCCTAGGTTTTCTCGACGACTCCAATCTAGAACCGGCAACTCCCGATCTCGACTCCTTGATGAGGAGTTTCGAGGAAGAAATTGCCACTGCGTCGTCTTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGTGAGTCTCAGCCGGAGTTAGGCTACCTCTTGGAAGCCTCCGACGACGAGCTTGGTCTACCGCCTTCAGTTACTTCGAATAGCCAACAGGAGTTTGACGAAGCGACCGAGTTTGCTCGAGTAACGACCGATTCGTCTGGGACCAGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTATGACGCTTTCGAACTGGAAGCCGGAGATATGTTCAGCGGCAGCGACGCGGCCGAGTATGTGGGTTTGGATGGGCTGTTGGAGTATTCGAATCTGTGTTCTGATGCGTTGGATAACTCGGATTTTCTCTGGCGGCAAGAATCTCTGCCGGCTCTATACGGAGCCATTGGGTTCGTCATCGTTGTCATTGTCGTCCGGACATGGTGA

Protein sequence

MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEEIATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEATEFARVTTDSSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYSNLCSDALDNSDFLWRQESLPALYGAIGFVIVVIVVRTW

Homology

[Close]

BLAST of CmaCh04G015180.1 vs. TrEMBL
Match: A0A0A0KR57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608610 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.3e-72
Identity = 150/189 (79.37%), Postives = 160/189 (84.66%), Query Frame = 1


Query: 1   MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEE 60
           MENQ+S+KRD D   DSA+SE GSPEVKRLRDDLLGF DDS+ EP T DLDSLMRSFEEE
Sbjct: 1   MENQNSKKRDRD---DSAESETGSPEVKRLRDDLLGFFDDSDPEPPTQDLDSLMRSFEEE 60

Query: 61  IATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEATEFARVT 120
           IATASSSPVPVVDLTADS +SQPELGYLLEASDDELGLPP   SNSQQ      +FAR++
Sbjct: 61  IATASSSPVPVVDLTADSADSQPELGYLLEASDDELGLPP---SNSQQ------DFARIS 120

Query: 121 TDSSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYSNLCSDALDNSDF 180
           TDSS   EMWRF DQIPNYDAFELE GD++SGSD AEYV  DGLLEYSNLC DA DNSDF
Sbjct: 121 TDSSDIGEMWRFVDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLEYSNLCFDASDNSDF 177

Query: 181 LWRQESLPA 190
           LWRQESLPA
Sbjct: 181 LWRQESLPA 177

[Close]

BLAST of CmaCh04G015180.1 vs. TrEMBL
Match: A5C7N0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03420 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.7e-43
Identity = 103/195 (52.82%), Postives = 140/195 (71.79%), Query Frame = 1


Query: 1   MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSN----LEPATPDLDSLMRS 60
           ME+  SRKR  DD   S + E  SPEVKRLRDDLL  LDDS+     +PAT DL S+M+ 
Sbjct: 1   MEDYVSRKRVRDD---SDEFELDSPEVKRLRDDLLCILDDSDPLADKDPATHDLASVMKI 60

Query: 61  FEEEIATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEATEF 120
           FEE+I+ +   PVPVVDLT+DSGESQP++ +LLEASDDELGLPPS +S+S++   E  +F
Sbjct: 61  FEEQISASPPRPVPVVDLTSDSGESQPDISFLLEASDDELGLPPSWSSSSEELKSEDAKF 120

Query: 121 ARVTTDSSGTSEMWRFEDQIPNYDAFELEAGDMFS-GSDAAEYVGLDGLLEYSNLCSDAL 180
            +++T+SSG SE W F D+IP+YD+FE   G+  +  ++  EYV L+GL ++S++   + 
Sbjct: 121 VQISTESSGLSEFWGFGDEIPSYDSFEFGFGETHTVANNYGEYVALEGLFDHSDISFGST 180

Query: 181 DNSDFLWRQESLPAL 191
           D S+F WR E+LPAL
Sbjct: 181 DFSEFSWRHETLPAL 192

[Close]

BLAST of CmaCh04G015180.1 vs. TrEMBL
Match: A0A061EIE8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011817 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.8e-43
Identity = 111/197 (56.35%), Postives = 140/197 (71.07%), Query Frame = 1


Query: 1   MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEE 60
           ME  +S+KR  DD   SA+SE  SPEVKRLRDDLL FLDDS+  P   DL S+M+SFEEE
Sbjct: 1   MEELNSKKRVRDD---SAESELDSPEVKRLRDDLLDFLDDSDSVPVNQDLASVMKSFEEE 60

Query: 61  IATASSS---PVPVVDLTADSGESQPELGYLLEASDDELGLPP--SVTSNSQQEFDEATE 120
           I+ A+S+   PVP+VDLT+DSGESQP+LGYLLEASDDELGLPP  + T+ S++   E TE
Sbjct: 61  ISAAASTATVPVPLVDLTSDSGESQPDLGYLLEASDDELGLPPPAATTTGSEELSSEVTE 120

Query: 121 FARVTTD-SSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYS--NLCS 180
            A V +D SSG  E+WRFEDQIPNY++FE   GD  +G    ++V   GL EYS  ++  
Sbjct: 121 LALVDSDSSSGIGELWRFEDQIPNYESFEFGIGDHLNG----DHVTYCGLYEYSDVDVYY 180

Query: 181 DALDNSDFLWRQESLPA 190
           D+ + +  LWR E+L A
Sbjct: 181 DSSEYAGSLWRPETLSA 190

[Close]

BLAST of CmaCh04G015180.1 vs. TrEMBL
Match: M5XHY5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010994mg PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.5e-43
Identity = 107/198 (54.04%), Postives = 132/198 (66.67%), Query Frame = 1


Query: 5   SSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEEIATA 64
           +S+KR  D+   S DSE  S EVKRLR+DLLGFLDDS L+ AT DLDS+M+SFEEEIA+ 
Sbjct: 36  NSKKRIRDN---SDDSEHDSAEVKRLREDLLGFLDDSELDAATQDLDSVMKSFEEEIAST 95

Query: 65  SS-------------SPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFD 124
           +S             +PVPVVDLT+DSGES P+LGYLL ASDDELGLPPS   +      
Sbjct: 96  TSCPTSPRPSPPTPSAPVPVVDLTSDSGESNPDLGYLLGASDDELGLPPSENFSEVLAEG 155

Query: 125 EATEFARVTTDSSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYSNLC 184
             TE  RV++DSSG  E WRF+D  P+YD+FEL    +     + EYV  DGL E S++ 
Sbjct: 156 RETELVRVSSDSSGIDEFWRFDDHPPSYDSFEL---GVHVHDSSTEYVAFDGLFENSDVY 215

Query: 185 SDALDNSDFLWRQESLPA 190
            D+ D +DF WR E+LPA
Sbjct: 216 FDSSDYTDFSWRFETLPA 227

[Close]

BLAST of CmaCh04G015180.1 vs. TrEMBL
Match: B9HJ20_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s11850g PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.9e-41
Identity = 106/192 (55.21%), Postives = 128/192 (66.67%), Query Frame = 1


Query: 3   NQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEEIA 62
           N   R RD  D     +S+   PEVK++RDDL G LDDS+ +    DLDS+M+SFE+EI+
Sbjct: 6   NHKKRVRDGSD-----ESDLDFPEVKKIRDDLFGLLDDSDPDSLGQDLDSVMKSFEQEIS 65

Query: 63  TASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEA--TEFARV- 122
            +SSSPVPVVDLT++SGESQP+LG+LLEASDDELGLPPS  + S  E      TE ARV 
Sbjct: 66  ASSSSPVPVVDLTSESGESQPDLGFLLEASDDELGLPPSSINLSSGEVKGGVETELARVD 125

Query: 123 TTDSSGT-SEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGL-DGLLEYSNLCSDALDN 182
           +  SSG   E+W FEDQIP YD+F L  GD    SD   YVG  D L EYSN+C D+ D 
Sbjct: 126 SAQSSGVGGELWGFEDQIPTYDSFGLGVGDSNYSSD---YVGFDDSLFEYSNVCFDSSDF 185

Query: 183 SDFLWRQESLPA 190
           SD  WR   +PA
Sbjct: 186 SDLSWRLGGMPA 189

[Close]

BLAST of CmaCh04G015180.1 vs. TAIR10
Match: AT1G13360.1 (AT1G13360.1 unknown protein)

HSP 1 Score: 141.7 bits (356), Expect = 4.9e-34
Identity = 84/193 (43.52%), Postives = 121/193 (62.69%), Query Frame = 1


Query: 3   NQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEEIA 62
           + + +KR  D+  D A  +  SPEVKRLRDDL   LDDS+ EP + DLDS+M+SFE+E++
Sbjct: 12  DSAEKKRVRDESFDEAVLD--SPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELS 71

Query: 63  TASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVT------SNSQQEFDEATEF 122
           T +++       ++ +GE+QP+LGYLLEASDDELGLPP  +      +  +   +  T+ 
Sbjct: 72  TVTTT---TAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDL 131

Query: 123 ARVTTDSSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYSNLCSDALD 182
            R ++DSSG  E+W FED + NY   +  +G      D  +YV ++GL E+S+ C D+ D
Sbjct: 132 VRASSDSSGIDEIWGFEDHVSNYGGLDFGSG----VGDGGDYVAVEGLFEFSDDCFDSGD 191

Query: 183 NSDFLWRQESLPA 190
              F WR ESLPA
Sbjct: 192 L--FSWRSESLPA 193

[Close]

BLAST of CmaCh04G015180.1 vs. TAIR10
Match: AT3G25870.1 (AT3G25870.1 unknown protein)

HSP 1 Score: 110.9 bits (276), Expect = 9.3e-25
Identity = 74/171 (43.27%), Postives = 96/171 (56.14%), Query Frame = 1


Query: 24  SPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEEIATASSSPVPVVDLTADSGESQP 83
           SP+VKRLRDDL    DDS L+P + DLDS+M+SFE E++T +++          SGE+QP
Sbjct: 28  SPDVKRLRDDLF---DDSGLDPVSQDLDSVMKSFENELSTTTAA--------LSSGETQP 87

Query: 84  ELGYLLEASDDELGLPPSVTSNS----QQEFDEATEFARVTTDSSGTSEMWRFEDQIPNY 143
           +LGYL EASDDELGLPP +T           +  TE  R ++DSS   E+  FED +  +
Sbjct: 88  DLGYLFEASDDELGLPPPLTPPQTLLPPSCEETVTELVRASSDSSEVGELCGFEDHVTEF 147

Query: 144 DAFELEAGDMFSGSDAAEYVGLDGLLEYSNLCSDALDNSD-FLWRQESLPA 190
              +L               G DGL EY + C   LD+ D F WR E LPA
Sbjct: 148 GPCDL---------------GDDGLFEYFDGC---LDSGDLFSWRPEFLPA 169

[Close]

BLAST of CmaCh04G015180.1 vs. NCBI nr
Match: gi|659091520|ref|XP_008446589.1| (PREDICTED: uncharacterized protein LOC103489276 [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 7.8e-74
Identity = 152/189 (80.42%), Postives = 163/189 (86.24%), Query Frame = 1


Query: 1   MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEE 60
           MENQ+S+KRD D   DSA+SE GSPEVKRLRDDLLGF D+S+ EPAT DLDSLMRSFEEE
Sbjct: 1   MENQNSKKRDRD---DSAESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60

Query: 61  IATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEATEFARVT 120
           IATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPP   SNSQ+      EFAR++
Sbjct: 61  IATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPP---SNSQE------EFARIS 120

Query: 121 TDSSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYSNLCSDALDNSDF 180
           TDSS   EMWRFEDQIPNYDAFELE GD++SGSD AEYV  DGLLEYSNLC D+ DNSDF
Sbjct: 121 TDSSDIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLEYSNLCFDSSDNSDF 177

Query: 181 LWRQESLPA 190
           LWRQESLPA
Sbjct: 181 LWRQESLPA 177

[Close]

BLAST of CmaCh04G015180.1 vs. NCBI nr
Match: gi|449434638|ref|XP_004135103.1| (PREDICTED: uncharacterized protein LOC101221594 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 3.3e-72
Identity = 150/189 (79.37%), Postives = 160/189 (84.66%), Query Frame = 1


Query: 1   MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEE 60
           MENQ+S+KRD D   DSA+SE GSPEVKRLRDDLLGF DDS+ EP T DLDSLMRSFEEE
Sbjct: 1   MENQNSKKRDRD---DSAESETGSPEVKRLRDDLLGFFDDSDPEPPTQDLDSLMRSFEEE 60

Query: 61  IATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEATEFARVT 120
           IATASSSPVPVVDLTADS +SQPELGYLLEASDDELGLPP   SNSQQ      +FAR++
Sbjct: 61  IATASSSPVPVVDLTADSADSQPELGYLLEASDDELGLPP---SNSQQ------DFARIS 120

Query: 121 TDSSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYSNLCSDALDNSDF 180
           TDSS   EMWRF DQIPNYDAFELE GD++SGSD AEYV  DGLLEYSNLC DA DNSDF
Sbjct: 121 TDSSDIGEMWRFVDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLEYSNLCFDASDNSDF 177

Query: 181 LWRQESLPA 190
           LWRQESLPA
Sbjct: 181 LWRQESLPA 177

[Close]

BLAST of CmaCh04G015180.1 vs. NCBI nr
Match: gi|1009155212|ref|XP_015895591.1| (PREDICTED: uncharacterized protein LOC107429425 [Ziziphus jujuba])

HSP 1 Score: 196.4 bits (498), Expect = 4.8e-47
Identity = 110/197 (55.84%), Postives = 141/197 (71.57%), Query Frame = 1


Query: 1   MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEE 60
           MENQ  +KR  D    S DSE  SPEVKRLRDDLLGFLDDS+ +  T DLDS+M+S EEE
Sbjct: 1   MENQFVKKRVRDA---SEDSEHDSPEVKRLRDDLLGFLDDSDADQTTQDLDSVMKSLEEE 60

Query: 61  I-------ATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEA 120
           I       A+ +S+PVPVVDLT+D+GESQPELGYLLEASDDELGLPPS+ S+ ++   + 
Sbjct: 61  ISATTSCSASPASAPVPVVDLTSDTGESQPELGYLLEASDDELGLPPSINSSDEECKKDE 120

Query: 121 TEFARVTTDSSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYSNLCSD 180
           TE   V+TDSS   E+W F+D IP+YD+F L  GD ++ ++  +YV  DGL  YS++  D
Sbjct: 121 TELVGVSTDSSVIGELWGFDDHIPSYDSFGLGVGDNYNSNN--DYVAFDGLFGYSDVYFD 180

Query: 181 ALDNSDFLWRQESLPAL 191
           + D ++  WR E+LPAL
Sbjct: 181 SSDFAEISWRSETLPAL 192

[Close]

BLAST of CmaCh04G015180.1 vs. NCBI nr
Match: gi|225423955|ref|XP_002282387.1| (PREDICTED: uncharacterized protein LOC100268142 [Vitis vinifera])

HSP 1 Score: 184.1 bits (466), Expect = 2.4e-43
Identity = 103/195 (52.82%), Postives = 140/195 (71.79%), Query Frame = 1


Query: 1   MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSN----LEPATPDLDSLMRS 60
           ME+  SRKR  DD   S + E  SPEVKRLRDDLL  LDDS+     +PAT DL S+M+ 
Sbjct: 1   MEDYVSRKRVRDD---SDEFELDSPEVKRLRDDLLCILDDSDPLADKDPATHDLASVMKI 60

Query: 61  FEEEIATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEATEF 120
           FEE+I+ +   PVPVVDLT+DSGESQP++ +LLEASDDELGLPPS +S+S++   E  +F
Sbjct: 61  FEEQISASPPRPVPVVDLTSDSGESQPDISFLLEASDDELGLPPSWSSSSEELKSEDAKF 120

Query: 121 ARVTTDSSGTSEMWRFEDQIPNYDAFELEAGDMFS-GSDAAEYVGLDGLLEYSNLCSDAL 180
            +++T+SSG SE W F D+IP+YD+FE   G+  +  ++  EYV L+GL ++S++   + 
Sbjct: 121 VQISTESSGLSEFWGFGDEIPSYDSFEFGFGETHTVANNYGEYVALEGLFDHSDISFGST 180

Query: 181 DNSDFLWRQESLPAL 191
           D S+F WR E+LPAL
Sbjct: 181 DFSEFSWRHETLPAL 192

[Close]

BLAST of CmaCh04G015180.1 vs. NCBI nr
Match: gi|590700777|ref|XP_007046247.1| (Uncharacterized protein TCM_011817 [Theobroma cacao])

HSP 1 Score: 183.0 bits (463), Expect = 5.5e-43
Identity = 111/197 (56.35%), Postives = 140/197 (71.07%), Query Frame = 1


Query: 1   MENQSSRKRDWDDLADSADSEAGSPEVKRLRDDLLGFLDDSNLEPATPDLDSLMRSFEEE 60
           ME  +S+KR  DD   SA+SE  SPEVKRLRDDLL FLDDS+  P   DL S+M+SFEEE
Sbjct: 1   MEELNSKKRVRDD---SAESELDSPEVKRLRDDLLDFLDDSDSVPVNQDLASVMKSFEEE 60

Query: 61  IATASSS---PVPVVDLTADSGESQPELGYLLEASDDELGLPP--SVTSNSQQEFDEATE 120
           I+ A+S+   PVP+VDLT+DSGESQP+LGYLLEASDDELGLPP  + T+ S++   E TE
Sbjct: 61  ISAAASTATVPVPLVDLTSDSGESQPDLGYLLEASDDELGLPPPAATTTGSEELSSEVTE 120

Query: 121 FARVTTD-SSGTSEMWRFEDQIPNYDAFELEAGDMFSGSDAAEYVGLDGLLEYS--NLCS 180
            A V +D SSG  E+WRFEDQIPNY++FE   GD  +G    ++V   GL EYS  ++  
Sbjct: 121 LALVDSDSSSGIGELWRFEDQIPNYESFEFGIGDHLNG----DHVTYCGLYEYSDVDVYY 180

Query: 181 DALDNSDFLWRQESLPA 190
           D+ + +  LWR E+L A
Sbjct: 181 DSSEYAGSLWRPETLSA 190

The following BLAST results are available for this feature:

BLAST of CmaCh04G015180.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G015180.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR57_CUCSA	2.3e-72	79.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608610 PE=4 SV=1	[more]
A5C7N0_VITVI	1.7e-43	52.82	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03420 PE=4 SV=...	[more]
A0A061EIE8_THECC	3.8e-43	56.35	Uncharacterized protein OS=Theobroma cacao GN=TCM_011817 PE=4 SV=1	[more]
M5XHY5_PRUPE	8.5e-43	54.04	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010994mg PE=4 SV=1	[more]
B9HJ20_POPTR	7.9e-41	55.21	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s11850g PE=4 SV=1	[more]

BLAST of CmaCh04G015180.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13360.1	4.9e-34	43.52	unknown protein	[more]
AT3G25870.1	9.3e-25	43.27	unknown protein	[more]

BLAST of CmaCh04G015180.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091520\|ref\|XP_008446589.1\|	7.8e-74	80.42	PREDICTED: uncharacterized protein LOC103489276 [Cucumis melo]	[more]
gi\|449434638\|ref\|XP_004135103.1\|	3.3e-72	79.37	PREDICTED: uncharacterized protein LOC101221594 [Cucumis sativus]	[more]
gi\|1009155212\|ref\|XP_015895591.1\|	4.8e-47	55.84	PREDICTED: uncharacterized protein LOC107429425 [Ziziphus jujuba]	[more]
gi\|225423955\|ref\|XP_002282387.1\|	2.4e-43	52.82	PREDICTED: uncharacterized protein LOC100268142 [Vitis vinifera]	[more]
gi\|590700777\|ref\|XP_007046247.1\|	5.5e-43	56.35	Uncharacterized protein TCM_011817 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G015180	CmaCh04G015180	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G015180.1	CmaCh04G015180.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G015180.1.exon.1	CmaCh04G015180.1.exon.1	exon
CmaCh04G015180.1.exon.2	CmaCh04G015180.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G015180.1.CDS.1	CmaCh04G015180.1.CDS.1	CDS
CmaCh04G015180.1.CDS.2	CmaCh04G015180.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34539	FAMILY NOT NAMED	coord: 3..190 score: 5.8