CmaCh04G014790.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G014790.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pentatricopeptide repeat-containing protein, putative
Location	Cma_Chr04 : 7520724 .. 7522913 (+)
Sequence length	2190

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCTCTGCTTCTGCGTTAGAGCTTCAAAGACCATAGCCGCCACAGCTGCTAAGTACCCTTTCTCTTTCAAGGTACGCCTTCTCCTCCCCTTCTCTTCATTGCTCCCTTCCTGCACTCTAAACAACTCCATAGCAACCCTATCGGAATCCCATTATAGAGACCTCATCTTCGACACTATTGAAGAAAAGCCCTGGGCCTTTTGCAACAATAACTGGGTCTCCGATCAATTTAGTGCCGTGATCATTGACCCTGACTTGTTTATTCGAGTCCTCAATTCCATTCGAATCAGGCCTAGAGTTGCCTTGCGTTTCTTCCGATGGGTCGAGGCGCAGCCCGATTTTAAGGGATCGGAATTTGTGTTCTGTGCTATTCTTGATATTCTTGCTCAGAATAATTTGATGGGTTCTGCGTATTGGGTGATGGAGAGGGTGGTTAGCATTGAAATGCACGGAGTTGTTGATGTTTTAATTGCTGGGCATTTGTGTTTAGAGGCTTCAATTAAGCTTCTTGATATTCTATTGTTGATATGCACGAAGAAATCAATGGTTGATGAATGCTTGTTGGTTTTTGATAAAATGATTCGGAATGGTTTACTGCCTGATGTCAAGAACTGTAATAGGATTCTCAGGGTTCTAAGAGATGAGAATCTCGTGAGTAAAGCTAAAACTGTTTATAGGATGATGGAACAGTTTGGGATTAAGCCAACTATTGTCACGTTTAATACCATGTTGGATTCCTTTTGCAAGGAGGGGCAAGTACATCAAGCTTTAGAGCTTCTGTCAGAGATGCAAAAGAGAGGGTGTTTCCCAAATGATGTAACCTACAACGTGTTGGTCAATGGGTTGTCGAAGAAAGGAAAGCTTGAACAAGCAAAGGAACTTATTGAAGAGATGTTGAATTCTGGACTCAACGTTTCGGCATACACATATAATCCTTTGATCAATGGTTTTTGCAAGAAAGGACTGTTTGTTGAAGCGTTTGATCTTGTGGAAGAAATGATGAATCGAAGAGCTTTCCCTACCTTATCGACTTATAATACTCTCATGTACGGCCTTTGTAAGTGGGGGCAAGTGACAGATGCTAGACTCCAGTTTTCTGATATGTTTAAAAGCAACTTTATGCCAGACATCGTTTCGTTCAACATCTTACTGTATGGTTACTGTAGGTCTGGGAGTATAAGTGAGGCCTTTCTCTTGTTTGATGAATTGAAATGCAGAGATCTCGTTCCGACCGTGGTAACATATAATACTCTTATATATGGGCTTTGCAGGTTGGGTTACTTGGATGTTGCTTTAAGGTTGAAAAAGGAAATGATTGATCAAGGGTTATTCCCTGACATCTTTACATATACTATACTGGTTAATGGGTCTTGCAAGTTGGGGAATTTATCAATGGCCAGAGAGTTCTTTGATGAGATGTTGTGCAAGGGGTTGAAGCCTGATCGTTTTGCTTACATTACTCGAATAGTAGGAGAAATGAAGCTCGGTGATACATCTGTAGCATATAGCATGCGAGAAGAAATGTTGGCCGAGGGTATCCCTCCAGATGTCGTCACATACAACGTTTTCGTGCATGGACTTTGTGAACAGGGAAACCTTCAAGAGGCGTGTGATCTGTTAGAGAATATGGTTCACAACGGTCTTGTTCCAGACCATGTGACGTATACTAGTATCATTAACGCTTTCATGAAAAACGGGCACTTGAGGAAGGCAAGAGAGATTTTCAATGAAATGCTCAGCAAGGGTTTAGCCCCTTCTGTAGTAACATATACGGTTCTCATTCATGCACATGCAGCTAAGGGAATGCTGGATCTAGCATTTATGTACTTCTCGAAAATGCTCGAGAAGGGCGTTCCAGCAAACGTAATCACATACAATGCAATAATTAATGGGTTTTGCAAGGTGAGGAGATTGGACGAGGCTTATAAATATTTCGATGAGATGGAAGAAAAAGGAATTCTTCCAAATAAGTTTAGTTATACCATATTAATAAATGAGAACTGCAATATGGATTATTGGGAAGAGGCTCTAAGATTGTACAGAGAAATGCTAGATCGAGAAATTCAACCCGATTCTTTTACGCATGGCGTGCTTCTGAAAAATCTACATACAGATTTTAAAGTCCATGCAATACAGCGTGTAGAGAGTTTGATTCAAAATGTTGAAGATAATGTAAATGGCAGGTGA

mRNA sequence

ATGACCCTCTGCTTCTGCGTTAGAGCTTCAAAGACCATAGCCGCCACAGCTGCTAAGTACCCTTTCTCTTTCAAGGTACGCCTTCTCCTCCCCTTCTCTTCATTGCTCCCTTCCTGCACTCTAAACAACTCCATAGCAACCCTATCGGAATCCCATTATAGAGACCTCATCTTCGACACTATTGAAGAAAAGCCCTGGGCCTTTTGCAACAATAACTGGGTCTCCGATCAATTTAGTGCCGTGATCATTGACCCTGACTTGTTTATTCGAGTCCTCAATTCCATTCGAATCAGGCCTAGAGTTGCCTTGCGTTTCTTCCGATGGGTCGAGGCGCAGCCCGATTTTAAGGGATCGGAATTTGTGTTCTGTGCTATTCTTGATATTCTTGCTCAGAATAATTTGATGGGTTCTGCGTATTGGGTGATGGAGAGGGTGGTTAGCATTGAAATGCACGGAGTTGTTGATGTTTTAATTGCTGGGCATTTGTGTTTAGAGGCTTCAATTAAGCTTCTTGATATTCTATTGTTGATATGCACGAAGAAATCAATGGTTGATGAATGCTTGTTGGTTTTTGATAAAATGATTCGGAATGGTTTACTGCCTGATGTCAAGAACTGTAATAGGATTCTCAGGGTTCTAAGAGATGAGAATCTCGTGAGTAAAGCTAAAACTGTTTATAGGATGATGGAACAGTTTGGGATTAAGCCAACTATTGTCACGTTTAATACCATGTTGGATTCCTTTTGCAAGGAGGGGCAAGTACATCAAGCTTTAGAGCTTCTGTCAGAGATGCAAAAGAGAGGGTGTTTCCCAAATGATGTAACCTACAACGTGTTGGTCAATGGGTTGTCGAAGAAAGGAAAGCTTGAACAAGCAAAGGAACTTATTGAAGAGATGTTGAATTCTGGACTCAACGTTTCGGCATACACATATAATCCTTTGATCAATGGTTTTTGCAAGAAAGGACTGTTTGTTGAAGCGTTTGATCTTGTGGAAGAAATGATGAATCGAAGAGCTTTCCCTACCTTATCGACTTATAATACTCTCATGTACGGCCTTTGTAAGTGGGGGCAAGTGACAGATGCTAGACTCCAGTTTTCTGATATGTTTAAAAGCAACTTTATGCCAGACATCGTTTCGTTCAACATCTTACTGTATGGTTACTGTAGGTCTGGGAGTATAAGTGAGGCCTTTCTCTTGTTTGATGAATTGAAATGCAGAGATCTCGTTCCGACCGTGGTAACATATAATACTCTTATATATGGGCTTTGCAGGTTGGGTTACTTGGATGTTGCTTTAAGGTTGAAAAAGGAAATGATTGATCAAGGGTTATTCCCTGACATCTTTACATATACTATACTGGTTAATGGGTCTTGCAAGTTGGGGAATTTATCAATGGCCAGAGAGTTCTTTGATGAGATGTTGTGCAAGGGGTTGAAGCCTGATCGTTTTGCTTACATTACTCGAATAGTAGGAGAAATGAAGCTCGGTGATACATCTGTAGCATATAGCATGCGAGAAGAAATGTTGGCCGAGGGTATCCCTCCAGATGTCGTCACATACAACGTTTTCGTGCATGGACTTTGTGAACAGGGAAACCTTCAAGAGGCGTGTGATCTGTTAGAGAATATGGTTCACAACGGTCTTGTTCCAGACCATGTGACGTATACTAGTATCATTAACGCTTTCATGAAAAACGGGCACTTGAGGAAGGCAAGAGAGATTTTCAATGAAATGCTCAGCAAGGGTTTAGCCCCTTCTGTAGTAACATATACGGTTCTCATTCATGCACATGCAGCTAAGGGAATGCTGGATCTAGCATTTATGTACTTCTCGAAAATGCTCGAGAAGGGCGTTCCAGCAAACGTAATCACATACAATGCAATAATTAATGGGTTTTGCAAGGTGAGGAGATTGGACGAGGCTTATAAATATTTCGATGAGATGGAAGAAAAAGGAATTCTTCCAAATAAGTTTAGTTATACCATATTAATAAATGAGAACTGCAATATGGATTATTGGGAAGAGGCTCTAAGATTGTACAGAGAAATGCTAGATCGAGAAATTCAACCCGATTCTTTTACGCATGGCGTGCTTCTGAAAAATCTACATACAGATTTTAAAGTCCATGCAATACAGCGTGTAGAGAGTTTGATTCAAAATGTTGAAGATAATGTAAATGGCAGGTGA

Coding sequence (CDS)

ATGACCCTCTGCTTCTGCGTTAGAGCTTCAAAGACCATAGCCGCCACAGCTGCTAAGTACCCTTTCTCTTTCAAGGTACGCCTTCTCCTCCCCTTCTCTTCATTGCTCCCTTCCTGCACTCTAAACAACTCCATAGCAACCCTATCGGAATCCCATTATAGAGACCTCATCTTCGACACTATTGAAGAAAAGCCCTGGGCCTTTTGCAACAATAACTGGGTCTCCGATCAATTTAGTGCCGTGATCATTGACCCTGACTTGTTTATTCGAGTCCTCAATTCCATTCGAATCAGGCCTAGAGTTGCCTTGCGTTTCTTCCGATGGGTCGAGGCGCAGCCCGATTTTAAGGGATCGGAATTTGTGTTCTGTGCTATTCTTGATATTCTTGCTCAGAATAATTTGATGGGTTCTGCGTATTGGGTGATGGAGAGGGTGGTTAGCATTGAAATGCACGGAGTTGTTGATGTTTTAATTGCTGGGCATTTGTGTTTAGAGGCTTCAATTAAGCTTCTTGATATTCTATTGTTGATATGCACGAAGAAATCAATGGTTGATGAATGCTTGTTGGTTTTTGATAAAATGATTCGGAATGGTTTACTGCCTGATGTCAAGAACTGTAATAGGATTCTCAGGGTTCTAAGAGATGAGAATCTCGTGAGTAAAGCTAAAACTGTTTATAGGATGATGGAACAGTTTGGGATTAAGCCAACTATTGTCACGTTTAATACCATGTTGGATTCCTTTTGCAAGGAGGGGCAAGTACATCAAGCTTTAGAGCTTCTGTCAGAGATGCAAAAGAGAGGGTGTTTCCCAAATGATGTAACCTACAACGTGTTGGTCAATGGGTTGTCGAAGAAAGGAAAGCTTGAACAAGCAAAGGAACTTATTGAAGAGATGTTGAATTCTGGACTCAACGTTTCGGCATACACATATAATCCTTTGATCAATGGTTTTTGCAAGAAAGGACTGTTTGTTGAAGCGTTTGATCTTGTGGAAGAAATGATGAATCGAAGAGCTTTCCCTACCTTATCGACTTATAATACTCTCATGTACGGCCTTTGTAAGTGGGGGCAAGTGACAGATGCTAGACTCCAGTTTTCTGATATGTTTAAAAGCAACTTTATGCCAGACATCGTTTCGTTCAACATCTTACTGTATGGTTACTGTAGGTCTGGGAGTATAAGTGAGGCCTTTCTCTTGTTTGATGAATTGAAATGCAGAGATCTCGTTCCGACCGTGGTAACATATAATACTCTTATATATGGGCTTTGCAGGTTGGGTTACTTGGATGTTGCTTTAAGGTTGAAAAAGGAAATGATTGATCAAGGGTTATTCCCTGACATCTTTACATATACTATACTGGTTAATGGGTCTTGCAAGTTGGGGAATTTATCAATGGCCAGAGAGTTCTTTGATGAGATGTTGTGCAAGGGGTTGAAGCCTGATCGTTTTGCTTACATTACTCGAATAGTAGGAGAAATGAAGCTCGGTGATACATCTGTAGCATATAGCATGCGAGAAGAAATGTTGGCCGAGGGTATCCCTCCAGATGTCGTCACATACAACGTTTTCGTGCATGGACTTTGTGAACAGGGAAACCTTCAAGAGGCGTGTGATCTGTTAGAGAATATGGTTCACAACGGTCTTGTTCCAGACCATGTGACGTATACTAGTATCATTAACGCTTTCATGAAAAACGGGCACTTGAGGAAGGCAAGAGAGATTTTCAATGAAATGCTCAGCAAGGGTTTAGCCCCTTCTGTAGTAACATATACGGTTCTCATTCATGCACATGCAGCTAAGGGAATGCTGGATCTAGCATTTATGTACTTCTCGAAAATGCTCGAGAAGGGCGTTCCAGCAAACGTAATCACATACAATGCAATAATTAATGGGTTTTGCAAGGTGAGGAGATTGGACGAGGCTTATAAATATTTCGATGAGATGGAAGAAAAAGGAATTCTTCCAAATAAGTTTAGTTATACCATATTAATAAATGAGAACTGCAATATGGATTATTGGGAAGAGGCTCTAAGATTGTACAGAGAAATGCTAGATCGAGAAATTCAACCCGATTCTTTTACGCATGGCGTGCTTCTGAAAAATCTACATACAGATTTTAAAGTCCATGCAATACAGCGTGTAGAGAGTTTGATTCAAAATGTTGAAGATAATGTAAATGGCAGGTGA

Protein sequence

MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLPSCTLNNSIATLSESHYRDLIFDTIEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILLLICTKKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRVESLIQNVEDNVNGR

Homology

[Close]

BLAST of CmaCh04G014790.1 vs. Swiss-Prot
Match: PPR56_ARATH (Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 4.5e-193
Identity = 341/725 (47.03%), Postives = 492/725 (67.86%), Query Frame = 1


Query: 1   MTLCF--CVRASKTIAATAAKYPFSFKVRLLLPFSSLLPSCTLNNSIATLS-ESHYRDLI 60
           M LC   C+RAS++  + +     +   R L  FS+L P C  ++S ++ + ES+Y +LI
Sbjct: 1   MILCLRLCLRASRSFFSISTTNNNNNLSRFLFRFSTL-PHCAASSSSSSSNLESYYANLI 60

Query: 61  FDTIEE--KPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDF 120
             +  +  KP    N  W S QF  ++ DP+L IRVLN IR++P +A RFF W++ Q D 
Sbjct: 61  LSSHGDSNKP----NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDV 120

Query: 121 KGSEFVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILL 180
           K S   F A+L+ILA+N+LM  AY V ER + + MH + D+LI G      ++KLLD+LL
Sbjct: 121 KQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLL 180

Query: 181 LICTKKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIK 240
            + TKKSM ++ LL F+KMIR G LP V+NCN +L+VLRD  +++KA  VY  M + GI 
Sbjct: 181 WVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIM 240

Query: 241 PTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKEL 300
           PT++TFNTMLDS  K G + +  ++  EM++R    ++VTYN+L+NG SK GK+E+A+  
Sbjct: 241 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 300

Query: 301 IEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCK 360
             +M  SG  V+ Y++NPLI G+CK+GLF +A+ + +EM+N   +PT STYN  +  LC 
Sbjct: 301 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 360

Query: 361 WGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVT 420
           +G++ DAR    ++  S   PD+VS+N L++GY + G   EA LLFD+L+  D+ P++VT
Sbjct: 361 FGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 420

Query: 421 YNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEML 480
           YNTLI GLC  G L+ A RLK+EM  Q +FPD+ TYT LV G  K GNLSMA E +DEML
Sbjct: 421 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 480

Query: 481 CKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLA-EGIPPDVVTYNVFVHGLCEQGNL 540
            KG+KPD +AY TR VGE++LGD+  A+ + EEM+A +   PD+  YNV + GLC+ GNL
Sbjct: 481 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 540

Query: 541 QEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVL 600
            +A +    +   GLVPDHVTYT++I  +++NG  + AR +++EML K L PSV+TY VL
Sbjct: 541 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 600

Query: 601 IHAHAAKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGI 660
           I+ HA  G L+ AF Y ++M ++GV  NV+T+NA++ G CK   +DEAY+Y  +MEE+GI
Sbjct: 601 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 660

Query: 661 LPNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQR 720
            PNK+SYT+LI++NC+ + WEE ++LY+EMLD+EI+PD +TH  L K+L  D +   ++ 
Sbjct: 661 PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEF 716

[Close]

BLAST of CmaCh04G014790.1 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.7e-92
Identity = 203/637 (31.87%), Postives = 330/637 (51.81%), Query Frame = 1


Query: 103 LRFFRWVEAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLI---- 162
           L+F  W      F  +    C  L IL +  L  +A  + E V +  +      L+    
Sbjct: 66  LKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSL 125

Query: 163 --AGHLCLEASIKLLDILLLICTKKSMVDECLLVFDKMIRNGLLPDVKNCNRIL-RVLRD 222
                LC   S  + D+++   ++ S++D+ L +      +G +P V + N +L   +R 
Sbjct: 126 QETYDLCYSTS-SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRS 185

Query: 223 ENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVT 282
           +  +S A+ V++ M +  + P + T+N ++  FC  G +  AL L  +M+ +GC PN VT
Sbjct: 186 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 245

Query: 283 YNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMM 342
           YN L++G  K  K++   +L+  M   GL  +  +YN +ING C++G   E   ++ EM 
Sbjct: 246 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM- 305

Query: 343 NRRAFPTLS-TYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSI 402
           NRR +     TYNTL+ G CK G    A +  ++M +    P ++++  L++  C++G++
Sbjct: 306 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 365

Query: 403 SEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTIL 462
           + A    D+++ R L P   TY TL+ G  + GY++ A R+ +EM D G  P + TY  L
Sbjct: 366 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 425

Query: 463 VNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGI 522
           +NG C  G +  A    ++M  KGL PD  +Y T + G  +  D   A  ++ EM+ +GI
Sbjct: 426 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 485

Query: 523 PPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKARE 582
            PD +TY+  + G CEQ   +EACDL E M+  GL PD  TYT++INA+   G L KA +
Sbjct: 486 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 545

Query: 583 IFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFMYFSKML-EKGVPANVITYN------ 642
           + NEM+ KG+ P VVTY+VLI+    +     A     K+  E+ VP++V TY+      
Sbjct: 546 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV-TYHTLIENC 605

Query: 643 ---------AIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEAL 702
                    ++I GFC    + EA + F+ M  K   P+  +Y I+I+ +C      +A 
Sbjct: 606 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 665

Query: 703 RLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRV 716
            LY+EM+       + T   L+K LH + KV+ +  V
Sbjct: 666 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697

[Close]

BLAST of CmaCh04G014790.1 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 172/505 (34.06%), Postives = 288/505 (57.03%), Query Frame = 1


Query: 190 VFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFC 249
           V+ ++ R+G+  +V   N ++  L  +  + K  T    +++ G+ P IVT+NT++ ++ 
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 250 KEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAY 309
            +G + +A EL++ M  +G  P   TYN ++NGL K GK E+AKE+  EML SGL+  + 
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 310 TYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDM 369
           TY  L+   CKKG  VE   +  +M +R   P L  ++++M    + G +  A + F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 370 FKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYL 429
            ++  +PD V + IL+ GYCR G IS A  L +E+  +     VVTYNT+++GLC+   L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 430 DVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITR 489
             A +L  EM ++ LFPD +T TIL++G CKLGNL  A E F +M  K ++ D   Y T 
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 490 IVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGL 549
           + G  K+GD   A  +  +M+++ I P  ++Y++ V+ LC +G+L EA  + + M+   +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 550 VPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFM 609
            P  +   S+I  + ++G+         +M+S+G  P  ++Y  LI+    +  +  AF 
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 610 YFSKMLEK--GVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINE 669
              KM E+  G+  +V TYN+I++GFC+  ++ EA     +M E+G+ P++ +YT +IN 
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701

Query: 670 NCNMDYWEEALRLYREMLDREIQPD 693
             + D   EA R++ EML R   PD
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPD 726

[Close]

BLAST of CmaCh04G014790.1 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-84
Identity = 179/501 (35.73%), Postives = 272/501 (54.29%), Query Frame = 1


Query: 201 PDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALEL 260
           P  K+ N +L +L   N    A  V+  M    I PT+ TF  ++ +FC   ++  AL L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 261 LSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCK 320
           L +M K GC PN V Y  L++ LSK  ++ +A +L+EEM   G    A T+N +I G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 321 KGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVS 380
                EA  +V  M+ R   P   TY  LM GLCK G+V  A+    D+F     P+IV 
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPEIVI 359

Query: 381 FNILLYGYCRSGSISEA-FLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEM 440
           FN L++G+   G + +A  +L D +    +VP V TYN+LIYG  + G + +AL +  +M
Sbjct: 360 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 419

Query: 441 IDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDT 500
            ++G  P++++YTILV+G CKLG +  A    +EM   GLKP+   +   I    K    
Sbjct: 420 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 479

Query: 501 SVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSI 560
             A  +  EM  +G  PDV T+N  + GLCE   ++ A  LL +M+  G+V + VTY ++
Sbjct: 480 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 539

Query: 561 INAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFMYFSKMLEKGV 620
           INAF++ G +++AR++ NEM+ +G     +TY  LI      G +D A   F KML  G 
Sbjct: 540 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 599

Query: 621 PANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEALR 680
             + I+ N +ING C+   ++EA ++  EM  +G  P+  ++  LIN  C     E+ L 
Sbjct: 600 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 659

Query: 681 LYREMLDREIQPDSFTHGVLL 701
           ++R++    I PD+ T   L+
Sbjct: 660 MFRKLQAEGIPPDTVTFNTLM 676

[Close]

BLAST of CmaCh04G014790.1 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-82
Identity = 182/620 (29.35%), Postives = 311/620 (50.16%), Query Frame = 1


Query: 89  IRVLNSIRIRP--RVALRFFRWVEAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVV 148
           +++L+S+R +P    ALR F     +P+F     ++  IL  L ++        ++E + 
Sbjct: 51  VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 110

Query: 149 SIEMHGVVDVLIAGHLCLEASIKLLDILLLICTKKSMVDECLLVFDKMIRN-GLLPDVKN 208
           S                 E       IL+    +  + DE L V D MI   GL PD   
Sbjct: 111 SSRC--------------EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHF 170

Query: 209 CNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQ 268
            NR+L +L D N +   +  +  M  +GIKP + TFN ++ + C+  Q+  A+ +L +M 
Sbjct: 171 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 230

Query: 269 KRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFV 328
             G  P++ T+  ++ G  ++G L+ A  + E+M+  G + S  + N +++GFCK+G   
Sbjct: 231 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 290

Query: 329 EAFDLVEEMMNRRAF-PTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNIL 388
           +A + ++EM N+  F P   T+NTL+ GLCK G V  A      M +  + PD+ ++N +
Sbjct: 291 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 350

Query: 389 LYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGL 448
           + G C+ G + EA  + D++  RD  P  VTYNTLI  LC+   ++ A  L + +  +G+
Sbjct: 351 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 410

Query: 449 FPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYS 508
            PD+ T+  L+ G C   N  +A E F+EM  KG +PD F Y   I      G    A +
Sbjct: 411 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 470

Query: 509 MREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFM 568
           M ++M   G    V+TYN  + G C+    +EA ++ + M  +G+  + VTY ++I+   
Sbjct: 471 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 530

Query: 569 KNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFMYFSKMLEKGVPANVI 628
           K+  +  A ++ ++M+ +G  P   TY  L+      G +  A      M   G   +++
Sbjct: 531 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 590

Query: 629 TYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEALRLYREM 688
           TY  +I+G CK  R++ A K    ++ KGI     +Y  +I          EA+ L+REM
Sbjct: 591 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 650

Query: 689 LDR-EIQPDSFTHGVLLKNL 704
           L++ E  PD+ ++ ++ + L
Sbjct: 651 LEQNEAPPDAVSYRIVFRGL 656

[Close]

BLAST of CmaCh04G014790.1 vs. TrEMBL
Match: A0A0A0KR97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611050 PE=4 SV=1)

HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 622/729 (85.32%), Postives = 666/729 (91.36%), Query Frame = 1


Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLPSCTLNNSIATLSESHYRDLIFDT 60
           MTLCFCVRASK I   AA YPF FKVR L PFSS L SCTLNN+IATLSE+HYRDLIFDT
Sbjct: 1   MTLCFCVRASKAIVTNAAIYPFCFKVRRLFPFSSFLHSCTLNNAIATLSETHYRDLIFDT 60

Query: 61  IEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEF 120
           I+EKPWAFC NNWVSDQF AVI DP LFIRVL+S+RIRPRVALRFFRWV AQPDFK SEF
Sbjct: 61  IKEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEF 120

Query: 121 VFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILLLICTK 180
           VFCAILDIL  N+LM +AYWVMERVVS EMHGVVDVLIAGH+C + SIKLLDILLLI TK
Sbjct: 121 VFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVCSKDSIKLLDILLLIYTK 180

Query: 181 KSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVT 240
           KSMV+ECLLVFDKMIRNGLLPDVKNCNRILRVLRDENL+SKAK VY MMEQFGIKPT+VT
Sbjct: 181 KSMVEECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVT 240

Query: 241 FNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEML 300
           +NTMLDS+CKEG+V QALELLSEMQ+RGC+PNDVTYNVLVNGLSKKG+LEQAK LIEEML
Sbjct: 241 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 300

Query: 301 NSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVT 360
           NSGLNVSAYTYNPLINGFC+KGLFVEAFDLVEEM+NRRAFPTLSTYNTLMYGLCKW QVT
Sbjct: 301 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 360

Query: 361 DARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLI 420
             RL+FSDM KS F PDIVSFN LLYGYCR+G ISEAFLLFDELKCRDLVPTV+TYNTLI
Sbjct: 361 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 420

Query: 421 YGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLK 480
           +GLC  GYLD ALRLKKEM DQGLFPDIFTYTILVNG  KLG +SMAR FF+EML KGLK
Sbjct: 421 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 480

Query: 481 PDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDL 540
           PDRFAY TRIVGEMK+ DTSVA+SM+EEMLA G PPDV+TYNVFVH LC+QGN +EACDL
Sbjct: 481 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 540

Query: 541 LENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAA 600
           LENMV +GL+PDHVTYTSIIN F+KNGHLRKARE+FNEMLSKG+APSVVTYTVLIHAHAA
Sbjct: 541 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 600

Query: 601 KGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFS 660
           K MLDLAFMYFSKMLEK VPANVITYNAIING C  RR+DEAYKYFDEMEEKGILPNKFS
Sbjct: 601 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 660

Query: 661 YTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRVESLIQ 720
           YTILINE+CNM YWEEALRLYREMLDR+IQPDSFTH V LKNLH D++VHA+Q VESLIQ
Sbjct: 661 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 720

Query: 721 NVEDNVNGR 730
           NVEDN+N R
Sbjct: 721 NVEDNINVR 729

[Close]

BLAST of CmaCh04G014790.1 vs. TrEMBL
Match: A0A0D2NFM2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G194300 PE=4 SV=1)

HSP 1 Score: 968.0 bits (2501), Expect = 6.4e-279
Identity = 473/734 (64.44%), Postives = 591/734 (80.52%), Query Frame = 1


Query: 1   MTLCFCVRASKTIAATAAK---------YPFSFKVRLLLPFSSLLPSCTLNNSIATLSES 60
           MTLC   RASK++A  A           +P SF +   LP  S  P    ++S ++ SE+
Sbjct: 1   MTLCI-KRASKSLATIAPLSLTCKVRFLFPSSFSLLHSLPSPSSPPEPDSSSSSSSSSET 60

Query: 61  HYRDLIFDTIEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEA 120
           HY+ LIF+TI+EKPWAFCNN WVS++F A+I+DP LFI+VLN +R RPR+ALRFFRWVE 
Sbjct: 61  HYKQLIFNTIDEKPWAFCNNKWVSNKFHAIIVDPHLFIKVLNLMRERPRIALRFFRWVEM 120

Query: 121 QPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLL 180
           QP  K SE VF  +LDIL +NNL+ SAYWVMERV+   MHG+VDVLI G+L  EAS+KLL
Sbjct: 121 QPGVKRSELVFSVMLDILVENNLLRSAYWVMERVIKFHMHGIVDVLICGYLKFEASVKLL 180

Query: 181 DILLLICTKKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQ 240
           D+LLL+C+KK MVD CL +FDKM+R GLLPDVKNCNRIL +LRD++LV+KA  VYRMM++
Sbjct: 181 DLLLLVCSKKLMVDHCLWIFDKMVRTGLLPDVKNCNRILTMLRDKSLVAKASQVYRMMKE 240

Query: 241 FGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQ 300
           FGIKPTI+T+NTMLDSFCKEG+V QA+ELLSEM+   CFPNDVTYNVL+NGL+K  KLEQ
Sbjct: 241 FGIKPTIITYNTMLDSFCKEGEVQQAIELLSEMR---CFPNDVTYNVLINGLTKNCKLEQ 300

Query: 301 AKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMY 360
           A+ LI EML  G+ VSAYTYNPLI G+ KKGL VEA +L E+M++     T++TYNT MY
Sbjct: 301 AEGLIREMLKLGIKVSAYTYNPLICGYFKKGLLVEALNLGEQMVSNGVVHTVATYNTFMY 360

Query: 361 GLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVP 420
           GLC+WG++ DAR QF+DM K N +PDIVS+N L+Y YCR G+ISEAFLLF+EL+CR LVP
Sbjct: 361 GLCRWGRLDDARQQFNDMLKRNMIPDIVSYNTLIYWYCRIGNISEAFLLFNELRCRRLVP 420

Query: 421 TVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFF 480
           TVVTYNTLI GLCR+G LD+A  LK  MI QG+FPD++TYTILVNGS KLGNLS AR+ F
Sbjct: 421 TVVTYNTLIDGLCRVGDLDLARYLKDTMITQGIFPDVYTYTILVNGSYKLGNLSAARDLF 480

Query: 481 DEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQ 540
           DEML  GL+PD FAY T++VGE+K GD + A+SM E+M+A+ +PPD++ YNVFVH   + 
Sbjct: 481 DEMLHNGLEPDGFAYATQVVGELKHGDPARAFSMEEQMIAKELPPDLIIYNVFVHWHSKL 540

Query: 541 GNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTY 600
            + +EAC+LL  M+  GL+PDHVTYT+II+A+++NGHLRKARE+F+EMLSKGL+PSVVTY
Sbjct: 541 RDFKEACNLLHKMISIGLIPDHVTYTTIIHAYLENGHLRKAREMFHEMLSKGLSPSVVTY 600

Query: 601 TVLIHAHAAKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEE 660
           T+L+H HAAKG L LAFMYFS+M EKGV  NVITYNA+ING CKVRR+ +AYK+F EME 
Sbjct: 601 TILVHGHAAKGFLSLAFMYFSEMQEKGVQPNVITYNAMINGLCKVRRIGQAYKFFAEMEA 660

Query: 661 KGILPNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHA 720
           KGILPNK+SYTILINENC++  WEE+LRLY+EMLDREI PDS TH  LLK L+ D  ++A
Sbjct: 661 KGILPNKYSYTILINENCDVGNWEESLRLYQEMLDREILPDSCTHNALLKQLNNDCNLNA 720

Query: 721 IQRVESLIQNVEDN 726
           ++++E+LI   +++
Sbjct: 721 VRQLETLILECKES 730

[Close]

BLAST of CmaCh04G014790.1 vs. TrEMBL
Match: A0A0B0NNM2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_09096 PE=4 SV=1)

HSP 1 Score: 963.4 bits (2489), Expect = 1.6e-277
Identity = 477/730 (65.34%), Postives = 591/730 (80.96%), Query Frame = 1


Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFS-SLLPSC----------TLNNSIATLS 60
           MTLC   RASK++A T A    + KVR L PFS SLL S           + ++S ++ S
Sbjct: 1   MTLCI-KRASKSLA-TIAPLSLTCKVRFLFPFSFSLLHSLPSPSSPPEPDSSSSSSSSSS 60

Query: 61  ESHYRDLIFDTIEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWV 120
           E+HY+ LIF+TI+EKPWAFCN  WVS++F A+I+DP LFI+VLN +R RPR+ALRFFRWV
Sbjct: 61  ETHYKQLIFNTIDEKPWAFCNTKWVSNKFHAIIVDPHLFIKVLNLMRERPRIALRFFRWV 120

Query: 121 EAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIK 180
           E QP  K SE VF  +LDIL +NNL+ SAYWVMERV++  MHG+VDVLI G+L  E S+K
Sbjct: 121 EMQPGVKRSELVFSVMLDILVENNLLRSAYWVMERVITFHMHGIVDVLICGYLKFEVSVK 180

Query: 181 LLDILLLICTKKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMM 240
           LLD+LLL+C+KK MVD CL +FDKMIR GLLPDVKNCNRIL +LRD++LV+KA  VYRMM
Sbjct: 181 LLDLLLLVCSKKLMVDHCLWIFDKMIRTGLLPDVKNCNRILTMLRDKSLVAKASQVYRMM 240

Query: 241 EQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKL 300
           ++FGIKPTIVT+NTMLDSFCKEG+V QA+ELLSEM+   CFPNDVTYNVL+NGL+K  KL
Sbjct: 241 KEFGIKPTIVTYNTMLDSFCKEGEVQQAIELLSEMR---CFPNDVTYNVLINGLTKNCKL 300

Query: 301 EQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTL 360
           +QA+ LI EML  G+ VSAYTYNPLI G+ KKGL VEA +L E+M+N     T++TYNT 
Sbjct: 301 DQAEGLIREMLKLGIKVSAYTYNPLICGYFKKGLLVEALNLGEQMVNNGVVHTVATYNTF 360

Query: 361 MYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDL 420
           MYGLC+WG++ DAR QF+DM K N +PD+VS+N L+Y YCR G+I EAFLLFDEL+CR L
Sbjct: 361 MYGLCRWGRLDDARQQFNDMLKRNMIPDVVSYNTLIYWYCRIGNIWEAFLLFDELRCRRL 420

Query: 421 VPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMARE 480
           VPTVVTYNTLI GLCR+G LD+A  LK  MI QG+FPD++TYTILVNGS KLGNLS AR+
Sbjct: 421 VPTVVTYNTLIDGLCRVGDLDLARYLKDTMITQGIFPDVYTYTILVNGSYKLGNLSAARD 480

Query: 481 FFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLC 540
            F+EML  GL+PDRFAY T++VGE+K GD + A+SM E+M+A+ +PPD++ YNVFVH   
Sbjct: 481 LFNEMLHNGLEPDRFAYTTQVVGELKHGDPARAFSMEEQMVAKELPPDLIIYNVFVHWHS 540

Query: 541 EQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVV 600
           +  + +EAC+LL  M+  GL+PDHVTYT+II+A+++NGHLRKARE+F+EMLSKGL+PSVV
Sbjct: 541 KLRDFKEACNLLHKMISIGLIPDHVTYTTIIHAYLENGHLRKAREMFHEMLSKGLSPSVV 600

Query: 601 TYTVLIHAHAAKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEM 660
           TYT+LIH HAAKG L LAFMYFS+M EKGV  NVITYNA+ING CKVRR+ +AYK+F EM
Sbjct: 601 TYTILIHGHAAKGFLSLAFMYFSEMQEKGVQPNVITYNAMINGLCKVRRICQAYKFFAEM 660

Query: 661 EEKGILPNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKV 720
           E KGILPNK+SYTILINEN ++  WEE+LRLY+EMLDREI PDS TH  LLK L+ D  +
Sbjct: 661 EAKGILPNKYSYTILINENSDVGNWEESLRLYQEMLDREILPDSCTHNALLKQLNKDCNL 720

[Close]

BLAST of CmaCh04G014790.1 vs. TrEMBL
Match: A0A067FBL4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004814mg PE=4 SV=1)

HSP 1 Score: 959.9 bits (2480), Expect = 1.8e-276
Identity = 464/729 (63.65%), Postives = 587/729 (80.52%), Query Frame = 1


Query: 3   LCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLL---PSCTLNNSIATL----SESHYRD 62
           +  C+RASK ++A +  Y +  KVR   PF   +   PS + +N+  ++    SES+Y++
Sbjct: 1   MTLCIRASKALSAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKE 60

Query: 63  LIFDTIEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDF 122
           LI  T+EEKPWAFCNN WVSD F AV+ DP+L +RVLN IR +PR+ALRFFRWVE QP  
Sbjct: 61  LIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGV 120

Query: 123 KGSEFVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILL 182
           K  EFVFC IL+IL ++ L+ SAYWV+E VV + MHG++DVLI G L    SIK+LD+LL
Sbjct: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180

Query: 183 LICTKKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIK 242
           LI TKKSMV++CLLVF+KM+RNGLLPDVKNCNRI++VLRD     KA+ VYRMM +FGIK
Sbjct: 181 LIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK 240

Query: 243 PTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKEL 302
           P+IVT+NTMLDSFCKEG++ +ALELL EMQ RGC PN VTYNVL+ G S+ G+LEQA+ L
Sbjct: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300

Query: 303 IEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCK 362
           I +ML  GL VSA++YNP+I G+ +KGL VEA +L EEM+ R   PTL+TYN L+YGLCK
Sbjct: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360

Query: 363 WGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVT 422
           WG+V+DAR +F +M + N +PDI+S+N LLYGYCRSG+I EAFLLFDEL+ R+LVPTVVT
Sbjct: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420

Query: 423 YNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEML 482
           YNTLI GLCR G L+VA +LK+ MI+QG+ PD+ TYTI+VNGSCK+GNLSMAREFF+EML
Sbjct: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480

Query: 483 CKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQ 542
            KGL+PDRFAY T+I GE+KLGDTS AY ++EEMLA+G PPD++TYNV VHGLC+ G+L+
Sbjct: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540

Query: 543 EACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLI 602
           EA +LL  MV +G +PDH+TYTSII+A ++ G LR+ R++FN ML KGL+P++VTYTVLI
Sbjct: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600

Query: 603 HAHAAKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGIL 662
           HAHAA+G L+LAFMYFS+M  KG+  NVITYNA+ING C++RR+D+AY  F +MEE+GIL
Sbjct: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660

Query: 663 PNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTH-GVLLKNLHTDFKVHAIQR 722
           PNK++YTILINENCN   W+EALRLY+EMLDREI+PD  TH  +LLK L  D+KVHA++ 
Sbjct: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720

Query: 723 VESLIQNVE 724
           +ESL    E
Sbjct: 721 LESLTLGAE 729

[Close]

BLAST of CmaCh04G014790.1 vs. TrEMBL
Match: F6HFL4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04390 PE=4 SV=1)

HSP 1 Score: 932.6 bits (2409), Expect = 3.0e-268
Identity = 456/719 (63.42%), Postives = 573/719 (79.69%), Query Frame = 1


Query: 3   LCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLPSCTLNNSIATLSESHYRDLIFDTIE 62
           +  C+RASK  A+       S KVRLL P S      T N+S    SE+H++D+I  +I 
Sbjct: 1   MTLCLRASK--ASATINPTRSIKVRLLFPCSFSFHDSTSNHSAPPFSETHFQDVISKSIR 60

Query: 63  EKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEFVF 122
           EKP  F N  W+S QF  VI+DPDLF+RVL+S R  PR+ALR FRW E+QP F+ SEFVF
Sbjct: 61  EKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVF 120

Query: 123 CAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILLLICTKKS 182
           CAIL+ILAQNNLM SAYWVMERV++  MH +VDVLI G +  E S+K+LD+L+ + +KKS
Sbjct: 121 CAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKS 180

Query: 183 MVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFN 242
           MV++CL VFDKMI++ L PDVKNCNRILR+LRD++L+SKA  VYR M +FGIKPTIVT+N
Sbjct: 181 MVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYN 240

Query: 243 TMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNS 302
           T+LDS+CK G+V Q L+LLSEMQ+RGC PNDVTYNVL+NGLSKKG+ EQAK LI EML +
Sbjct: 241 TLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT 300

Query: 303 GLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVTDA 362
           GL VSAYTYNPLI G+  KG+  EA  L EEM+ + A PT++TYN+ +YGLCK G+++DA
Sbjct: 301 GLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDA 360

Query: 363 RLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYG 422
             Q SDM  +N +PD+VS+N L+YGYCR G++ +AFLLFDEL+   L PT+VTYNTL+ G
Sbjct: 361 MQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDG 420

Query: 423 LCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPD 482
           LCR G L+VA +LK EMI++G+ PDI TYTILVNGSCK+G+LSMA+EFFDEML +GL+ D
Sbjct: 421 LCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELD 480

Query: 483 RFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLE 542
            +AY TRIVGE+KLGDTS A+S++EEMLA+G PPD++ YNV V GLC+ GNL+EA +LL+
Sbjct: 481 SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 540

Query: 543 NMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKG 602
            MV +G++PD+VTYTSII+A ++NG LRK REIF EMLSKGL PSVVTYTVLIH HA KG
Sbjct: 541 KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKG 600

Query: 603 MLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYT 662
            L+ AF+YFS+M EKG+  NVITYN++ING CKVRR+D+AY +F EM EKGI PNK+SYT
Sbjct: 601 RLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYT 660

Query: 663 ILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRVESLIQN 722
           ILINENCNM  W+EAL LY++MLDR +QPDS TH  LLK L  D K+ A++++ESL+ +
Sbjct: 661 ILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717

[Close]

BLAST of CmaCh04G014790.1 vs. TAIR10
Match: AT1G22960.1 (AT1G22960.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 676.0 bits (1743), Expect = 2.6e-194
Identity = 341/725 (47.03%), Postives = 492/725 (67.86%), Query Frame = 1


Query: 1   MTLCF--CVRASKTIAATAAKYPFSFKVRLLLPFSSLLPSCTLNNSIATLS-ESHYRDLI 60
           M LC   C+RAS++  + +     +   R L  FS+L P C  ++S ++ + ES+Y +LI
Sbjct: 1   MILCLRLCLRASRSFFSISTTNNNNNLSRFLFRFSTL-PHCAASSSSSSSNLESYYANLI 60

Query: 61  FDTIEE--KPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDF 120
             +  +  KP    N  W S QF  ++ DP+L IRVLN IR++P +A RFF W++ Q D 
Sbjct: 61  LSSHGDSNKP----NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDV 120

Query: 121 KGSEFVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILL 180
           K S   F A+L+ILA+N+LM  AY V ER + + MH + D+LI G      ++KLLD+LL
Sbjct: 121 KQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLL 180

Query: 181 LICTKKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIK 240
            + TKKSM ++ LL F+KMIR G LP V+NCN +L+VLRD  +++KA  VY  M + GI 
Sbjct: 181 WVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIM 240

Query: 241 PTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKEL 300
           PT++TFNTMLDS  K G + +  ++  EM++R    ++VTYN+L+NG SK GK+E+A+  
Sbjct: 241 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 300

Query: 301 IEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCK 360
             +M  SG  V+ Y++NPLI G+CK+GLF +A+ + +EM+N   +PT STYN  +  LC 
Sbjct: 301 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 360

Query: 361 WGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVT 420
           +G++ DAR    ++  S   PD+VS+N L++GY + G   EA LLFD+L+  D+ P++VT
Sbjct: 361 FGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 420

Query: 421 YNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEML 480
           YNTLI GLC  G L+ A RLK+EM  Q +FPD+ TYT LV G  K GNLSMA E +DEML
Sbjct: 421 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 480

Query: 481 CKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLA-EGIPPDVVTYNVFVHGLCEQGNL 540
            KG+KPD +AY TR VGE++LGD+  A+ + EEM+A +   PD+  YNV + GLC+ GNL
Sbjct: 481 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 540

Query: 541 QEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVL 600
            +A +    +   GLVPDHVTYT++I  +++NG  + AR +++EML K L PSV+TY VL
Sbjct: 541 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 600

Query: 601 IHAHAAKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGI 660
           I+ HA  G L+ AF Y ++M ++GV  NV+T+NA++ G CK   +DEAY+Y  +MEE+GI
Sbjct: 601 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 660

Query: 661 LPNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQR 720
            PNK+SYT+LI++NC+ + WEE ++LY+EMLD+EI+PD +TH  L K+L  D +   ++ 
Sbjct: 661 PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEF 716

[Close]

BLAST of CmaCh04G014790.1 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-93
Identity = 203/637 (31.87%), Postives = 330/637 (51.81%), Query Frame = 1


Query: 103 LRFFRWVEAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLI---- 162
           L+F  W      F  +    C  L IL +  L  +A  + E V +  +      L+    
Sbjct: 66  LKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSL 125

Query: 163 --AGHLCLEASIKLLDILLLICTKKSMVDECLLVFDKMIRNGLLPDVKNCNRIL-RVLRD 222
                LC   S  + D+++   ++ S++D+ L +      +G +P V + N +L   +R 
Sbjct: 126 QETYDLCYSTS-SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRS 185

Query: 223 ENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVT 282
           +  +S A+ V++ M +  + P + T+N ++  FC  G +  AL L  +M+ +GC PN VT
Sbjct: 186 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 245

Query: 283 YNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMM 342
           YN L++G  K  K++   +L+  M   GL  +  +YN +ING C++G   E   ++ EM 
Sbjct: 246 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM- 305

Query: 343 NRRAFPTLS-TYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSI 402
           NRR +     TYNTL+ G CK G    A +  ++M +    P ++++  L++  C++G++
Sbjct: 306 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 365

Query: 403 SEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTIL 462
           + A    D+++ R L P   TY TL+ G  + GY++ A R+ +EM D G  P + TY  L
Sbjct: 366 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 425

Query: 463 VNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGI 522
           +NG C  G +  A    ++M  KGL PD  +Y T + G  +  D   A  ++ EM+ +GI
Sbjct: 426 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 485

Query: 523 PPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKARE 582
            PD +TY+  + G CEQ   +EACDL E M+  GL PD  TYT++INA+   G L KA +
Sbjct: 486 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 545

Query: 583 IFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFMYFSKML-EKGVPANVITYN------ 642
           + NEM+ KG+ P VVTY+VLI+    +     A     K+  E+ VP++V TY+      
Sbjct: 546 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV-TYHTLIENC 605

Query: 643 ---------AIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEAL 702
                    ++I GFC    + EA + F+ M  K   P+  +Y I+I+ +C      +A 
Sbjct: 606 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 665

Query: 703 RLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRV 716
            LY+EM+       + T   L+K LH + KV+ +  V
Sbjct: 666 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697

[Close]

BLAST of CmaCh04G014790.1 vs. TAIR10
Match: AT5G01110.1 (AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 328.6 bits (841), Expect = 1.0e-89
Identity = 172/505 (34.06%), Postives = 288/505 (57.03%), Query Frame = 1


Query: 190 VFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFC 249
           V+ ++ R+G+  +V   N ++  L  +  + K  T    +++ G+ P IVT+NT++ ++ 
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 250 KEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAY 309
            +G + +A EL++ M  +G  P   TYN ++NGL K GK E+AKE+  EML SGL+  + 
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 310 TYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDM 369
           TY  L+   CKKG  VE   +  +M +R   P L  ++++M    + G +  A + F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 370 FKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYL 429
            ++  +PD V + IL+ GYCR G IS A  L +E+  +     VVTYNT+++GLC+   L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 430 DVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITR 489
             A +L  EM ++ LFPD +T TIL++G CKLGNL  A E F +M  K ++ D   Y T 
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 490 IVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGL 549
           + G  K+GD   A  +  +M+++ I P  ++Y++ V+ LC +G+L EA  + + M+   +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 550 VPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFM 609
            P  +   S+I  + ++G+         +M+S+G  P  ++Y  LI+    +  +  AF 
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 610 YFSKMLEK--GVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINE 669
              KM E+  G+  +V TYN+I++GFC+  ++ EA     +M E+G+ P++ +YT +IN 
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701

Query: 670 NCNMDYWEEALRLYREMLDREIQPD 693
             + D   EA R++ EML R   PD
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPD 726

[Close]

BLAST of CmaCh04G014790.1 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 315.8 bits (808), Expect = 6.7e-86
Identity = 179/501 (35.73%), Postives = 272/501 (54.29%), Query Frame = 1


Query: 201 PDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALEL 260
           P  K+ N +L +L   N    A  V+  M    I PT+ TF  ++ +FC   ++  AL L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 261 LSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCK 320
           L +M K GC PN V Y  L++ LSK  ++ +A +L+EEM   G    A T+N +I G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 321 KGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVS 380
                EA  +V  M+ R   P   TY  LM GLCK G+V  A+    D+F     P+IV 
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPEIVI 359

Query: 381 FNILLYGYCRSGSISEA-FLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEM 440
           FN L++G+   G + +A  +L D +    +VP V TYN+LIYG  + G + +AL +  +M
Sbjct: 360 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 419

Query: 441 IDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDT 500
            ++G  P++++YTILV+G CKLG +  A    +EM   GLKP+   +   I    K    
Sbjct: 420 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 479

Query: 501 SVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSI 560
             A  +  EM  +G  PDV T+N  + GLCE   ++ A  LL +M+  G+V + VTY ++
Sbjct: 480 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 539

Query: 561 INAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFMYFSKMLEKGV 620
           INAF++ G +++AR++ NEM+ +G     +TY  LI      G +D A   F KML  G 
Sbjct: 540 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 599

Query: 621 PANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEALR 680
             + I+ N +ING C+   ++EA ++  EM  +G  P+  ++  LIN  C     E+ L 
Sbjct: 600 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 659

Query: 681 LYREMLDREIQPDSFTHGVLL 701
           ++R++    I PD+ T   L+
Sbjct: 660 MFRKLQAEGIPPDTVTFNTLM 676

[Close]

BLAST of CmaCh04G014790.1 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 308.9 bits (790), Expect = 8.2e-84
Identity = 182/620 (29.35%), Postives = 311/620 (50.16%), Query Frame = 1


Query: 89  IRVLNSIRIRP--RVALRFFRWVEAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVV 148
           +++L+S+R +P    ALR F     +P+F     ++  IL  L ++        ++E + 
Sbjct: 51  VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 110

Query: 149 SIEMHGVVDVLIAGHLCLEASIKLLDILLLICTKKSMVDECLLVFDKMIRN-GLLPDVKN 208
           S                 E       IL+    +  + DE L V D MI   GL PD   
Sbjct: 111 SSRC--------------EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHF 170

Query: 209 CNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQ 268
            NR+L +L D N +   +  +  M  +GIKP + TFN ++ + C+  Q+  A+ +L +M 
Sbjct: 171 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 230

Query: 269 KRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFV 328
             G  P++ T+  ++ G  ++G L+ A  + E+M+  G + S  + N +++GFCK+G   
Sbjct: 231 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 290

Query: 329 EAFDLVEEMMNRRAF-PTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNIL 388
           +A + ++EM N+  F P   T+NTL+ GLCK G V  A      M +  + PD+ ++N +
Sbjct: 291 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 350

Query: 389 LYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGL 448
           + G C+ G + EA  + D++  RD  P  VTYNTLI  LC+   ++ A  L + +  +G+
Sbjct: 351 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 410

Query: 449 FPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYS 508
            PD+ T+  L+ G C   N  +A E F+EM  KG +PD F Y   I      G    A +
Sbjct: 411 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 470

Query: 509 MREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFM 568
           M ++M   G    V+TYN  + G C+    +EA ++ + M  +G+  + VTY ++I+   
Sbjct: 471 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 530

Query: 569 KNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMLDLAFMYFSKMLEKGVPANVI 628
           K+  +  A ++ ++M+ +G  P   TY  L+      G +  A      M   G   +++
Sbjct: 531 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 590

Query: 629 TYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEALRLYREM 688
           TY  +I+G CK  R++ A K    ++ KGI     +Y  +I          EA+ L+REM
Sbjct: 591 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 650

Query: 689 LDR-EIQPDSFTHGVLLKNL 704
           L++ E  PD+ ++ ++ + L
Sbjct: 651 LEQNEAPPDAVSYRIVFRGL 656

[Close]

BLAST of CmaCh04G014790.1 vs. NCBI nr
Match: gi|659091657|ref|XP_008446661.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial [Cucumis melo])

HSP 1 Score: 1303.1 bits (3371), Expect = 0.0e+00
Identity = 640/729 (87.79%), Postives = 678/729 (93.00%), Query Frame = 1


Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLPSCTLNNSIATLSESHYRDLIFDT 60
           MTLCFCVRASK IA T A YPF FKVR L PFSS L SCTLNN+IATLSE+HYRDLIFDT
Sbjct: 1   MTLCFCVRASKAIATTTAIYPFCFKVRRLFPFSSFLHSCTLNNAIATLSETHYRDLIFDT 60

Query: 61  IEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEF 120
           I+EKPWAFCNNNWVSDQF AVI DP L IRVL+SIRIRPRVALRFFRWV AQPDFKGSEF
Sbjct: 61  IKEKPWAFCNNNWVSDQFGAVITDPHLLIRVLHSIRIRPRVALRFFRWVMAQPDFKGSEF 120

Query: 121 VFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILLLICTK 180
           VFCAILDIL QNNLM SAYWVMERVVSIEMHGVVD+LIAGH+CL+ASIKLLDILL I TK
Sbjct: 121 VFCAILDILVQNNLMRSAYWVMERVVSIEMHGVVDLLIAGHICLKASIKLLDILLWIYTK 180

Query: 181 KSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVT 240
           KSMV+ECLLVFDKMIRNGLLPDVKNCNRILRVLRD+NL+SKAK VY MMEQFGIKPT+VT
Sbjct: 181 KSMVEECLLVFDKMIRNGLLPDVKNCNRILRVLRDDNLLSKAKNVYGMMEQFGIKPTVVT 240

Query: 241 FNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEML 300
           +NTMLDS+CKEG+V QALELLSEMQ+RGC+PNDVTYNVLVNGLSKKG+LEQAK LIEEML
Sbjct: 241 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 300

Query: 301 NSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVT 360
           NSGLNVSAYTYNPLINGFCKKGLFVEAF LVEEMMNRRAFPTLSTYNTLM+GLCKWGQVT
Sbjct: 301 NSGLNVSAYTYNPLINGFCKKGLFVEAFGLVEEMMNRRAFPTLSTYNTLMHGLCKWGQVT 360

Query: 361 DARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLI 420
           DARL+FSDM  S   PDIVSFNILL+GYCR+G ISEAFLLFDELKCRDLVPTVVTYNTLI
Sbjct: 361 DARLRFSDMLNSKCTPDIVSFNILLHGYCRTGCISEAFLLFDELKCRDLVPTVVTYNTLI 420

Query: 421 YGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLK 480
           YGLC  GYLDVAL+LKKEM DQGLFPDIFTYTILVNG  KLG+ SMAR+FF+EMLC+GLK
Sbjct: 421 YGLCMWGYLDVALQLKKEMTDQGLFPDIFTYTILVNGCFKLGHSSMARDFFNEMLCQGLK 480

Query: 481 PDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDL 540
           PDRFAYITRIVGEMK+GDTSVA+SMREEMLA G PPDVVTYNVFVH LC+QGN +EACDL
Sbjct: 481 PDRFAYITRIVGEMKIGDTSVAFSMREEMLAAGFPPDVVTYNVFVHALCQQGNFEEACDL 540

Query: 541 LENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAA 600
           LENMV +GLVPDHVTYTSIIN F+KNGHLRKARE+FNEMLSKG+APSVVTYTVLIHAHAA
Sbjct: 541 LENMVRDGLVPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 600

Query: 601 KGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFS 660
           K MLDLAFMYFSKMLEK VPANVITYNAIING C  RR+DEAYKYFDEMEEKGILPNKFS
Sbjct: 601 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMARRMDEAYKYFDEMEEKGILPNKFS 660

Query: 661 YTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRVESLIQ 720
           YTILINE+CNMDYWEEALRLYREMLDR IQPDSFTH VLLKNLH D+KVHA+Q VESLIQ
Sbjct: 661 YTILINESCNMDYWEEALRLYREMLDRNIQPDSFTHSVLLKNLHRDYKVHAVQCVESLIQ 720

Query: 721 NVEDNVNGR 730
           NVEDNVN R
Sbjct: 721 NVEDNVNAR 729

[Close]

BLAST of CmaCh04G014790.1 vs. NCBI nr
Match: gi|778706117|ref|XP_011655805.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial [Cucumis sativus])

HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 622/729 (85.32%), Postives = 666/729 (91.36%), Query Frame = 1


Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLPSCTLNNSIATLSESHYRDLIFDT 60
           MTLCFCVRASK I   AA YPF FKVR L PFSS L SCTLNN+IATLSE+HYRDLIFDT
Sbjct: 1   MTLCFCVRASKAIVTNAAIYPFCFKVRRLFPFSSFLHSCTLNNAIATLSETHYRDLIFDT 60

Query: 61  IEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEF 120
           I+EKPWAFC NNWVSDQF AVI DP LFIRVL+S+RIRPRVALRFFRWV AQPDFK SEF
Sbjct: 61  IKEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEF 120

Query: 121 VFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILLLICTK 180
           VFCAILDIL  N+LM +AYWVMERVVS EMHGVVDVLIAGH+C + SIKLLDILLLI TK
Sbjct: 121 VFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVCSKDSIKLLDILLLIYTK 180

Query: 181 KSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVT 240
           KSMV+ECLLVFDKMIRNGLLPDVKNCNRILRVLRDENL+SKAK VY MMEQFGIKPT+VT
Sbjct: 181 KSMVEECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVT 240

Query: 241 FNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEML 300
           +NTMLDS+CKEG+V QALELLSEMQ+RGC+PNDVTYNVLVNGLSKKG+LEQAK LIEEML
Sbjct: 241 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 300

Query: 301 NSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQVT 360
           NSGLNVSAYTYNPLINGFC+KGLFVEAFDLVEEM+NRRAFPTLSTYNTLMYGLCKW QVT
Sbjct: 301 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 360

Query: 361 DARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLI 420
             RL+FSDM KS F PDIVSFN LLYGYCR+G ISEAFLLFDELKCRDLVPTV+TYNTLI
Sbjct: 361 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 420

Query: 421 YGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLK 480
           +GLC  GYLD ALRLKKEM DQGLFPDIFTYTILVNG  KLG +SMAR FF+EML KGLK
Sbjct: 421 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 480

Query: 481 PDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDL 540
           PDRFAY TRIVGEMK+ DTSVA+SM+EEMLA G PPDV+TYNVFVH LC+QGN +EACDL
Sbjct: 481 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 540

Query: 541 LENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAA 600
           LENMV +GL+PDHVTYTSIIN F+KNGHLRKARE+FNEMLSKG+APSVVTYTVLIHAHAA
Sbjct: 541 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 600

Query: 601 KGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFS 660
           K MLDLAFMYFSKMLEK VPANVITYNAIING C  RR+DEAYKYFDEMEEKGILPNKFS
Sbjct: 601 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 660

Query: 661 YTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRVESLIQ 720
           YTILINE+CNM YWEEALRLYREMLDR+IQPDSFTH V LKNLH D++VHA+Q VESLIQ
Sbjct: 661 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 720

Query: 721 NVEDNVNGR 730
           NVEDN+N R
Sbjct: 721 NVEDNINVR 729

[Close]

BLAST of CmaCh04G014790.1 vs. NCBI nr
Match: gi|694331013|ref|XP_009356190.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 1004.6 bits (2596), Expect = 8.9e-290
Identity = 482/722 (66.76%), Postives = 595/722 (82.41%), Query Frame = 1


Query: 3   LCFCVRASKTIAATA-AKYPFSFKVRLLLPFSSLLPSCTLNNSIAT--LSESHYRDLIFD 62
           +  C RASK +AATA A +    KVR   P S    +C+   S+ T   SE+ YRDLIFD
Sbjct: 1   MTLCARASKALAATASAVHHRPLKVRRFSPLSGSFRNCSSTTSLPTAAFSETQYRDLIFD 60

Query: 63  TIEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSE 122
           TI+EKPWAFCN+ WVSD F AVI+DPDLF+RVL  IR RPR+ALRFFRWVE QP FK SE
Sbjct: 61  TIDEKPWAFCNSKWVSDPFQAVIVDPDLFVRVLVEIRSRPRIALRFFRWVEGQPGFKRSE 120

Query: 123 FVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILLLICT 182
           F FC IL+ILA NNLM  AYWVMERV+S+ MHG+VDVLI  ++  + S+KLLD+L  + T
Sbjct: 121 FAFCVILEILAHNNLMRPAYWVMERVISVNMHGIVDVLINEYMFSKVSLKLLDLLFWVYT 180

Query: 183 KKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIV 242
           KK M+++CL +FDKMIRN LLPDVKNCNR+LR+LR+++LV++AK VYRMM + GIKPTIV
Sbjct: 181 KKLMLEQCLSIFDKMIRNRLLPDVKNCNRVLRILRNKHLVTRAKEVYRMMGEAGIKPTIV 240

Query: 243 TFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEM 302
           T+NTMLDSFCKEG+V QALELLSEMQKRGCFPNDVTYNVL+NGLSKKG+LEQAKELI+EM
Sbjct: 241 TYNTMLDSFCKEGEVQQALELLSEMQKRGCFPNDVTYNVLINGLSKKGELEQAKELIKEM 300

Query: 303 LNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQV 362
           + +GL ++A+TYNPLI G+C KGL  EA  L +EM+ + A PT++TYN+LMYGLCKWG++
Sbjct: 301 MKAGLRITAFTYNPLICGYCNKGLLEEALSLEKEMVVKGANPTVATYNSLMYGLCKWGRI 360

Query: 363 TDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTL 422
           TDAR QFS+M   N MPDIVS+N L++GYCRSG++  AF+LFDEL+ R   PTVVTYNTL
Sbjct: 361 TDARDQFSNMLNRNIMPDIVSYNTLIHGYCRSGNLGAAFILFDELRHRTFTPTVVTYNTL 420

Query: 423 IYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGL 482
           + GLCR G L VA +LKKEM +QG+FPD+FTYTILVNGSC  GNLSMA+E FDEML KG+
Sbjct: 421 MDGLCRFGDLAVAGQLKKEMTNQGIFPDVFTYTILVNGSCNAGNLSMAKELFDEMLHKGV 480

Query: 483 KPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACD 542
           +PDRFAY TRIVGE++LGD S A+SM+EE+ A G PPD+ TYN+FV+G+C+ GNL EA  
Sbjct: 481 EPDRFAYNTRIVGELRLGDPSKAFSMQEEIQARGFPPDLFTYNIFVNGICKLGNLDEAYT 540

Query: 543 LLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHA 602
           LL+ MV +G+VPDH+TYTS+I+A +++G L KARE+F EML+KGL+PSV+TYTVLIHAHA
Sbjct: 541 LLQKMVRDGIVPDHITYTSMIHAHLESGQLMKAREVFYEMLNKGLSPSVITYTVLIHAHA 600

Query: 603 AKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKF 662
           AKG L+LA+MYFS+M EK +  NVITYNA+ING CKV R+D+AY+YF EMEEKGI PNK+
Sbjct: 601 AKGRLELAYMYFSEMQEKRIWPNVITYNALINGLCKVMRMDQAYEYFTEMEEKGIAPNKY 660

Query: 663 SYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRVESLI 722
           +YTILINENCNM  W+EA RLY++MLDREI+PDS TH  L K+L  DF++HA++ +ESLI
Sbjct: 661 TYTILINENCNMGNWKEAFRLYKQMLDREIKPDSCTHSALFKHLDKDFQLHAVRYLESLI 720

[Close]

BLAST of CmaCh04G014790.1 vs. NCBI nr
Match: gi|658062219|ref|XP_008367001.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Malus domestica])

HSP 1 Score: 991.9 bits (2563), Expect = 6.0e-286
Identity = 475/722 (65.79%), Postives = 592/722 (81.99%), Query Frame = 1


Query: 3   LCFCVRASKTIAATA-AKYPFSFKVRLLLPFSSLLPSCTLNNSIAT--LSESHYRDLIFD 62
           +  C RASK +AATA A +    KVR   P S    +C+   S+ T   SE+ YRDLIFD
Sbjct: 1   MTLCXRASKALAATASAVHHRPLKVRRFSPLSGSFRNCSSTTSLPTAAFSETQYRDLIFD 60

Query: 63  TIEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSE 122
           TI+EKPWAFCN+ WVSD+F AVI+DPDLFIRVL  IR RPR+ALRFFRWVE QP  K SE
Sbjct: 61  TIDEKPWAFCNSKWVSDRFQAVIVDPDLFIRVLVEIRTRPRIALRFFRWVEGQPGLKRSE 120

Query: 123 FVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILLLICT 182
           F FC IL+ILA NNLM  AYWVMERV+S+ MHG+VD+LI  ++  + S+KLLD+L  + T
Sbjct: 121 FAFCVILEILAHNNLMRPAYWVMERVISVNMHGIVDILINEYMFSKVSLKLLDLLFWVYT 180

Query: 183 KKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIV 242
           KK M+++CL +FDKMIRN LLPDVKNCNR+LR+LR+++LV++AK VYRMM + GIKPTIV
Sbjct: 181 KKLMLEQCLSIFDKMIRNRLLPDVKNCNRVLRILRNKHLVTRAKEVYRMMGEAGIKPTIV 240

Query: 243 TFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEM 302
           T+NTMLDSFCKEG+V QALELLSEMQKRGCFPNDVTYNVL+NGLSKKG+LEQAK LI+EM
Sbjct: 241 TYNTMLDSFCKEGEVQQALELLSEMQKRGCFPNDVTYNVLINGLSKKGELEQAKGLIKEM 300

Query: 303 LNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQV 362
           +  GL ++A+TYNPLI G+C KGL  EA  L +EM+ + A PT++TYN+LMYGLCKWG++
Sbjct: 301 MKXGLRITAFTYNPLICGYCNKGLLEEALSLEKEMVIKGANPTVATYNSLMYGLCKWGRM 360

Query: 363 TDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTL 422
           TDAR QFS+M   N +PDIVS+N L+YGYCR G++ +AF+LFDEL+ R   PT+VTYNTL
Sbjct: 361 TDARDQFSNMLNRNIVPDIVSYNTLIYGYCRLGNLGDAFILFDELRHRTFTPTIVTYNTL 420

Query: 423 IYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGL 482
           + GLCR G L VA +LKKEM +QG+ PD+FTYTILVNGSC  GNLSMA+E FDEML KG+
Sbjct: 421 MDGLCRSGDLAVAGQLKKEMTNQGICPDVFTYTILVNGSCNAGNLSMAKELFDEMLRKGV 480

Query: 483 KPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACD 542
           +PDRFAY TRIVGE++LGD S A+SM+EE+ A G PPD+ TYN+FV+G+C+ GNL EA  
Sbjct: 481 EPDRFAYNTRIVGELRLGDPSKAFSMQEEIQARGFPPDLFTYNIFVNGICKLGNLDEAYT 540

Query: 543 LLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHA 602
           LL+ MV +G+VPDH+TYTS+I+A +++G L KARE+F EML+KGL+PSV+TYTVLIHAHA
Sbjct: 541 LLQKMVRDGIVPDHITYTSMIHAHLESGQLMKAREVFYEMLNKGLSPSVITYTVLIHAHA 600

Query: 603 AKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKF 662
           AKG L+LA+MYFS+M EK +  NV+TYNA+ING CKV R+D+AY+YF EMEEKGI PNK+
Sbjct: 601 AKGRLELAYMYFSEMQEKRIWPNVVTYNALINGLCKVMRMDQAYEYFXEMEEKGIAPNKY 660

Query: 663 SYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRVESLI 722
           +YTILINENCNM  W+EALRLY++MLDR I+PDS TH  L K+L  DF++HA++ ++SLI
Sbjct: 661 TYTILINENCNMGNWKEALRLYKQMLDRXIEPDSCTHSALFKHLDKDFQLHAVRYLDSLI 720

[Close]

BLAST of CmaCh04G014790.1 vs. NCBI nr
Match: gi|657993896|ref|XP_008389244.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Malus domestica])

HSP 1 Score: 989.9 bits (2558), Expect = 2.3e-285
Identity = 475/722 (65.79%), Postives = 591/722 (81.86%), Query Frame = 1


Query: 3   LCFCVRASKTIAATA-AKYPFSFKVRLLLPFSSLLPSCTLNNSIAT--LSESHYRDLIFD 62
           +  C RASK +AATA A +    KVR   P S    +C+   S+ T   SE+ YRDLIFD
Sbjct: 1   MTLCXRASKALAATASAVHHRPLKVRRFSPLSGSFRNCSSTTSLPTAAFSETQYRDLIFD 60

Query: 63  TIEEKPWAFCNNNWVSDQFSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSE 122
           TI+EKPWAFCN+ WVSD+F AVI+DPDLFIRVL  IR RPR+ALRFFRWVE QP  K SE
Sbjct: 61  TIDEKPWAFCNSKWVSDRFQAVIVDPDLFIRVLVEIRTRPRIALRFFRWVEGQPGLKRSE 120

Query: 123 FVFCAILDILAQNNLMGSAYWVMERVVSIEMHGVVDVLIAGHLCLEASIKLLDILLLICT 182
           F FC IL+ILA NNLM  AYWVMERV+S+ MHG+VD+LI  ++  + S+KLLD+L  + T
Sbjct: 121 FAFCVILEILAHNNLMRPAYWVMERVISVNMHGIVDILINEYMFSKVSLKLLDLLFWVYT 180

Query: 183 KKSMVDECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIV 242
           KK M+++CL +FDKMIRN LLPDVKNCNR+LR+LR+++LV++AK VYRMM + GIKPTIV
Sbjct: 181 KKLMLEQCLSIFDKMIRNRLLPDVKNCNRVLRILRNKHLVTRAKEVYRMMGEAGIKPTIV 240

Query: 243 TFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEM 302
           T+NTMLDSFCKEG+V QALELLSEMQKRGCFPNDVTYNVL+NGLSKKG+LEQAK LI+EM
Sbjct: 241 TYNTMLDSFCKEGEVQQALELLSEMQKRGCFPNDVTYNVLINGLSKKGELEQAKGLIKEM 300

Query: 303 LNSGLNVSAYTYNPLINGFCKKGLFVEAFDLVEEMMNRRAFPTLSTYNTLMYGLCKWGQV 362
           +  GL ++A+TYNPLI G+C KGL  EA  L +EM+ + A PT++TYN+LMYGLCKWG++
Sbjct: 301 MKXGLRITAFTYNPLICGYCNKGLLEEALSLEKEMVIKGANPTVATYNSLMYGLCKWGRM 360

Query: 363 TDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTL 422
           TDAR QFS+M   N +PDIVS+N L+YGYCR G++ +AF+LFDEL+ R   PT+VTYNTL
Sbjct: 361 TDARDQFSNMLNRNIVPDIVSYNTLIYGYCRLGNLGDAFILFDELRHRTFTPTIVTYNTL 420

Query: 423 IYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGL 482
           + GLCR G L VA +LKKEM +QG+ PD+FTYTILVNGSC  GNLSMA+E FDEML KG+
Sbjct: 421 MDGLCRSGDLAVAGQLKKEMTNQGICPDVFTYTILVNGSCNAGNLSMAKELFDEMLRKGV 480

Query: 483 KPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACD 542
           +PDRFAY TRIVGE++LGD S A+SM+EE+ A G PPD+ TYN+FV+G+C+ GNL EA  
Sbjct: 481 EPDRFAYNTRIVGELRLGDPSKAFSMQEEIQARGFPPDLFTYNIFVNGICKLGNLDEAYT 540

Query: 543 LLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHA 602
           LL+ MV +G+VPDH+TYTS+I+A +++G L KARE+F EML+KGL+PSV+TYTVLIHAHA
Sbjct: 541 LLQKMVRDGIVPDHITYTSMIHAHLESGQLMKAREVFYEMLNKGLSPSVITYTVLIHAHA 600

Query: 603 AKGMLDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKF 662
           AKG L+LA+MYFS+M EK +  NV+TYNA+ING CKV R+D+AY+YF EMEEKGI PNK+
Sbjct: 601 AKGRLELAYMYFSEMQEKRIWPNVVTYNALINGLCKVMRMDQAYEYFIEMEEKGIAPNKY 660

Query: 663 SYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQRVESLI 722
           +YTILINENCNM  W+EALRLY++MLDR I+PDS TH  L K+L  DF++HA++ + SLI
Sbjct: 661 TYTILINENCNMGNWKEALRLYKQMLDRXIEPDSCTHSALFKHLDKDFQLHAVRYLXSLI 720

The following BLAST results are available for this feature:

BLAST of CmaCh04G014790.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR56_ARATH	4.5e-193	47.03	Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidop...	[more]
PP407_ARATH	2.7e-92	31.87	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN...	[more]
PP360_ARATH	1.8e-88	34.06	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN...	[more]
PP444_ARATH	1.2e-84	35.73	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
PP281_ARATH	1.5e-82	29.35	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]

BLAST of CmaCh04G014790.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR97_CUCSA	0.0e+00	85.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611050 PE=4 SV=1	[more]
A0A0D2NFM2_GOSRA	6.4e-279	64.44	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G194300 PE=4 SV=1	[more]
A0A0B0NNM2_GOSAR	1.6e-277	65.34	Uncharacterized protein OS=Gossypium arboreum GN=F383_09096 PE=4 SV=1	[more]
A0A067FBL4_CITSI	1.8e-276	63.65	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004814mg PE=4 SV=1	[more]
F6HFL4_VITVI	3.0e-268	63.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04390 PE=4 SV=...	[more]

BLAST of CmaCh04G014790.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22960.1	2.6e-194	47.03	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	1.5e-93	31.87	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G01110.1	1.0e-89	34.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G64320.1	6.7e-86	35.73	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53700.1	8.2e-84	29.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CmaCh04G014790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091657\|ref\|XP_008446661.1\|	0.0e+00	87.79	PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial ...	[more]
gi\|778706117\|ref\|XP_011655805.1\|	0.0e+00	85.32	PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial ...	[more]
gi\|694331013\|ref\|XP_009356190.1\|	8.9e-290	66.76	PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-...	[more]
gi\|658062219\|ref\|XP_008367001.1\|	6.0e-286	65.79	PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-...	[more]
gi\|657993896\|ref\|XP_008389244.1\|	2.3e-285	65.79	PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G014790	CmaCh04G014790	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G014790.1	CmaCh04G014790.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G014790.1.exon.1	CmaCh04G014790.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G014790.1.CDS.1	CmaCh04G014790.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 174..199 score: 0
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 513..545 score: 2.5E-11coord: 443..474 score: 1.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 622..670 score: 8.2E-19coord: 551..598 score: 5.3E-17coord: 309..355 score: 3.7E-14coord: 236..285 score: 3.9E-20coord: 376..425 score: 5.4
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 519..552 score: 4.0E-9coord: 449..482 score: 1.7E-8coord: 239..272 score: 8.5E-12coord: 379..413 score: 3.5E-8coord: 274..306 score: 2.2E-7coord: 177..203 score: 6.9E-4coord: 624..657 score: 4.7E-12coord: 589..622 score: 1.8E-6coord: 309..341 score: 2.7E-8coord: 345..377 score: 3.4E-6coord: 659..693 score: 1.9E-5coord: 414..448 score: 1.9E-9coord: 554..587 score: 7.1
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 657..691 score: 11.213coord: 552..586 score: 13.45coord: 167..201 score: 8.572coord: 237..271 score: 13.811coord: 118..152 score: 5.272coord: 307..341 score: 12.014coord: 202..236 score: 8.868coord: 517..551 score: 13.088coord: 482..516 score: 8.21coord: 622..656 score: 14.776coord: 412..446 score: 12.496coord: 587..621 score: 10.775coord: 447..481 score: 12.88coord: 377..411 score: 12.145coord: 272..306 score: 12.474coord: 342..376 score: 10
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 515..567 score: 2.2E-5coord: 251..303 score: 2.2E-5coord: 568..652 score: 9.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 276..404 score: 3.64E-8coord: 511..686 score: 3.6
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 172..698 score: 0.0coord: 25..122 score:
None	No IPR available	PANTHER	PTHR24015:SF724	SUBFAMILY NOT NAMED	coord: 25..122 score: 0.0coord: 172..698 score: