CmaCh04G014770.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G014770.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cyclin-D1-binding protein 1 like
Location	Cma_Chr04 : 7515381 .. 7516883 (+)
Sequence length	876

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCAGGGTTTCCTCCTGGTTTCCCATGGGAGTAAAGTGGGTGCTGGCCCTACTTTATCTTCTGTTATCCATGCATCTGTGAAACAAGTAATTGATTCAAGTTCCAAGTTATGGAAGGAATCCATCTCTTTATATGGTAAATGAATATTCATCTTCTTTCTATCGCAAATTTCCAGCCAAATTTTCTTCATGATGTATACGTTCACAACTATTCTCTACAGTCATAAACACGAGTAGCTTGGACTAATATTAGGTTATCCCACAGGAAAAGTTTTGAAGAATAAGTTCATTGTTTGCTGTTCCTTTTTCTGCGTCAGGACCTCTTTGATGTATGATCTAGATCTTGTTGTACATTGATTTTTTTGTTTGATTCATCATTTTCTAGTATCTACTTGTCTTTTTTTATGTTTAAACGGCTCTGGATGTCGTTTCGATTGAACCGAACAAGTAGTGACCGAGAATTTTGACATCATATATTTTGTATAATGTTGCAACTATAATGCATTGATTCAAGAAATCTGACGCTGAATTATGGAAGATGATGGTTTAGTTGAACTCCCATGATATCAGTTGGAGACTTGGGAGTACCCTTGAGTTCATGTTAAACTAGACTATCTATTACAATATCATGGAGTTAAGTTTCCATCGTAGAGTACTGATGATATGGTTAAATTCATTTATTCGTTGTTGTGAATTCATGTTTGCAATTCTGTTCTACTCTTTTGATAGAACTAGTGTTAACCTTGGTGAATGAACTTTTCAGGACCTCGGGATAGTAAGGATCAAAACCAAGTAGTTCCGCAGTTGGTTGGTGCAGTTTGGGAAGCTTGCTCTTCTCTTAAGAAAGCTCCTTCCACAAATGTAACTGCAATTGGCCGAGCAATAATGCAGGTTGCTGTATCAGTGAAGGACGTCCTCCGAGAAATGAAGGAGCTTAAACAAGGTCCCTCTGACTTGGACGACGCTCCCGAACAATCATCTAGCAAGGTTGAAAGCAGTTTGCACTTGCAGGATGAGGGTAATACAAGCGGTGATGCCGATATAGGTAACGATTTGTCAGCCGAAGAGATGAGAGTTGCTCAATCTGCTATTAGCATCATATCTTCAATACTTCAAGTTATTAAGGAACTCATTCGCTCTATCACTAGTTTGCTTAAGCTGGAAAATGAAACCAACGAAAGTAACTTAGCAACCTTGGAGAATCTATTGAGGCTATGCCAAGGAATTGGAGTACAGGTCGACGAGCTTGGAGCTCGTCTTTATCCCCCACAAGAGGTCCCAGCCATTAAAGAAGCTTCTGAGAAAATTTCTAGCTTTCTTGACAATATGCAGGCAGAGTTGGGAGGTCTTAATGGTAATTCGGAAGGCTTTCTTCAGGCATGCAACAATCTCCGAAATTCATTGAAGCAGCTCGAGATCGAACTAGGTGGCTTCACAGATTCTGATCTAGAAAGTAGAATTCTAGAAAGTAGAAGGCAGAATGTAACGTTAAACGTCTAA

mRNA sequence

ATGCTGCAGGGTTTCCTCCTGGTTTCCCATGGGAGTAAAGTGGGTGCTGGCCCTACTTTATCTTCTGTTATCCATGCATCTGTGAAACAAGTAATTGATTCAAGTTCCAAGTTATGGAAGGAATCCATCTCTTTATATGGACCTCGGGATAGTAAGGATCAAAACCAAGTAGTTCCGCAGTTGGTTGGTGCAGTTTGGGAAGCTTGCTCTTCTCTTAAGAAAGCTCCTTCCACAAATGTAACTGCAATTGGCCGAGCAATAATGCAGGTTGCTGTATCAGTGAAGGACGTCCTCCGAGAAATGAAGGAGCTTAAACAAGGTCCCTCTGACTTGGACGACGCTCCCGAACAATCATCTAGCAAGGTTGAAAGCAGTTTGCACTTGCAGGATGAGGGTAATACAAGCGGTGATGCCGATATAGGTAACGATTTGTCAGCCGAAGAGATGAGAGTTGCTCAATCTGCTATTAGCATCATATCTTCAATACTTCAAGTTATTAAGGAACTCATTCGCTCTATCACTAGTTTGCTTAAGCTGGAAAATGAAACCAACGAAAGTAACTTAGCAACCTTGGAGAATCTATTGAGGCTATGCCAAGGAATTGGAGTACAGGTCGACGAGCTTGGAGCTCGTCTTTATCCCCCACAAGAGGTCCCAGCCATTAAAGAAGCTTCTGAGAAAATTTCTAGCTTTCTTGACAATATGCAGGCAGAGTTGGGAGGTCTTAATGGTAATTCGGAAGGCTTTCTTCAGGCATGCAACAATCTCCGAAATTCATTGAAGCAGCTCGAGATCGAACTAGGTGGCTTCACAGATTCTGATCTAGAAAGTAGAATTCTAGAAAGTAGAAGGCAGAATGTAACGTTAAACGTCTAA

Coding sequence (CDS)

ATGCTGCAGGGTTTCCTCCTGGTTTCCCATGGGAGTAAAGTGGGTGCTGGCCCTACTTTATCTTCTGTTATCCATGCATCTGTGAAACAAGTAATTGATTCAAGTTCCAAGTTATGGAAGGAATCCATCTCTTTATATGGACCTCGGGATAGTAAGGATCAAAACCAAGTAGTTCCGCAGTTGGTTGGTGCAGTTTGGGAAGCTTGCTCTTCTCTTAAGAAAGCTCCTTCCACAAATGTAACTGCAATTGGCCGAGCAATAATGCAGGTTGCTGTATCAGTGAAGGACGTCCTCCGAGAAATGAAGGAGCTTAAACAAGGTCCCTCTGACTTGGACGACGCTCCCGAACAATCATCTAGCAAGGTTGAAAGCAGTTTGCACTTGCAGGATGAGGGTAATACAAGCGGTGATGCCGATATAGGTAACGATTTGTCAGCCGAAGAGATGAGAGTTGCTCAATCTGCTATTAGCATCATATCTTCAATACTTCAAGTTATTAAGGAACTCATTCGCTCTATCACTAGTTTGCTTAAGCTGGAAAATGAAACCAACGAAAGTAACTTAGCAACCTTGGAGAATCTATTGAGGCTATGCCAAGGAATTGGAGTACAGGTCGACGAGCTTGGAGCTCGTCTTTATCCCCCACAAGAGGTCCCAGCCATTAAAGAAGCTTCTGAGAAAATTTCTAGCTTTCTTGACAATATGCAGGCAGAGTTGGGAGGTCTTAATGGTAATTCGGAAGGCTTTCTTCAGGCATGCAACAATCTCCGAAATTCATTGAAGCAGCTCGAGATCGAACTAGGTGGCTTCACAGATTCTGATCTAGAAAGTAGAATTCTAGAAAGTAGAAGGCAGAATGTAACGTTAAACGTCTAA

Protein sequence

MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQLVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSSKVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLENETNESNLATLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAELGGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLNV

Homology

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BLAST of CmaCh04G014770.1 vs. Swiss-Prot
Match: CCDB1_XENLA (Cyclin-D1-binding protein 1 homolog OS=Xenopus laevis GN=ccndbp1 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-06
Identity = 56/224 (25.00%), Postives = 102/224 (45.54%), Query Frame = 1


Query: 17  GPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQLV--GAVWEACSSLKK 76
           G TL   +  ++  VI+ + +L +  +S      S+ Q+    QLV  G+VWEAC   +K
Sbjct: 93  GITLRKTVREAIADVIEGTIQLVEVILS------SRIQSLSQAQLVSTGSVWEACDQWEK 152

Query: 77  APSTNVTAIGRAIMQVAVSVKDVLREMKELK-QGPSDLDDAPEQSSSKVESSLHLQDEGN 136
            P  N+ A+   +      VKD + E+++ +  G     D PE             DE  
Sbjct: 153 LPKDNLAAVQVIVSGYLDVVKDAIEEVEQAQTDGEDPFSDIPED------------DEIG 212

Query: 137 TSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLENETNESNLATLEN 196
             G+ D     S  + R+    + ++ +    +K++I +I +  K +      ++A L++
Sbjct: 213 ARGNQD--TYWSEADRRLMAPCLGLMKASKACLKKVIGAIKAHGKADTA---EHVAQLDD 272

Query: 197 LLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQA 238
           L+ + Q +   VDEL   +YPP     ++  + K+SS L  + A
Sbjct: 273 LVDVTQEVSPSVDELALSMYPPMNHATVRLNAAKLSSVLKKVLA 293

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BLAST of CmaCh04G014770.1 vs. TrEMBL
Match: A0A0A0KR79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611070 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 3.6e-116
Identity = 231/290 (79.66%), Postives = 256/290 (88.28%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           MLQGFLLVSHGS+VGAGPTLSSVIHAS+KQ+IDSS + WKES+SLYGP+ ++D+NQV+ Q
Sbjct: 117 MLQGFLLVSHGSQVGAGPTLSSVIHASLKQIIDSSFRFWKESVSLYGPQKNQDKNQVILQ 176

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSS 120
           LVGAVW+ACS+LKKAPSTN+TAIGRAI QVAVSVKDVLREMKELKQG SDLD APE+  +
Sbjct: 177 LVGAVWDACSALKKAPSTNITAIGRAITQVAVSVKDVLREMKELKQGSSDLDKAPEEICN 236

Query: 121 KVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLE 180
            VE     QDEGNTS DADIGNDLSAEEMRVAQSAI ++SSIL VIKELIRSITSLLKLE
Sbjct: 237 AVEGDS--QDEGNTSDDADIGNDLSAEEMRVAQSAIHVVSSILLVIKELIRSITSLLKLE 296

Query: 181 NETNESNLATLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAELG 240
           N   ESNLA+LENLL+LCQGIG+QVDELGA LYPPQE PAIK ASEKISSFLDNMQ ELG
Sbjct: 297 NANKESNLASLENLLKLCQGIGLQVDELGACLYPPQEGPAIKVASEKISSFLDNMQTELG 356

Query: 241 GLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
            LNGNSEGFLQACNNLR+SLKQLE ELGGF+  DLE+R+     QNVTL+
Sbjct: 357 SLNGNSEGFLQACNNLRDSLKQLETELGGFSSPDLETRM-----QNVTLS 399

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BLAST of CmaCh04G014770.1 vs. TrEMBL
Match: A0A067FBT6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017703mg PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 172/291 (59.11%), Postives = 215/291 (73.88%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           MLQGF+L+SHGS VGAGPTLS  IHASVKQV+DSS KL  ESI+LY   D+KD+  ++PQ
Sbjct: 83  MLQGFILLSHGSTVGAGPTLSLSIHASVKQVVDSSFKLMMESITLYAGSDNKDKEHLMPQ 142

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSS 120
            VGAVWEACS+LKK P+TN+TAIGRA+ QVAVS+KDVLREMKELK   SD ++      S
Sbjct: 143 YVGAVWEACSALKKTPATNITAIGRAMTQVAVSMKDVLREMKELKPSSSDQNNEASHDDS 202

Query: 121 KVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLE 180
               S H +D+ N+S D ++GNDLS+EEM+VAQ AI I+S +L VIKELIR+IT LLK E
Sbjct: 203 AKADSEHQEDD-NSSLD-ELGNDLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHE 262

Query: 181 NETNESNLA-TLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAEL 240
           N  +      TLE LL+LCQGIGVQ+DELGA LYPPQE+  IK  S KI S  D +Q E+
Sbjct: 263 NPDDGGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEV 322

Query: 241 GGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
              N +SE F+QACN LR+SLKQ++ E+  F  +DLE+++     QNV ++
Sbjct: 323 ESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAKL-----QNVAIS 366

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BLAST of CmaCh04G014770.1 vs. TrEMBL
Match: D7T8X3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04420 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.6e-79
Identity = 169/277 (61.01%), Postives = 212/277 (76.53%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           MLQGFL +SHGS VGAGPTLSS IHASVKQV+DSS +L KES+S YG R+ +DQ   +PQ
Sbjct: 81  MLQGFLFLSHGSTVGAGPTLSSSIHASVKQVVDSSFRLLKESVSSYGSRN-RDQKLSIPQ 140

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSD-LDDAPEQSS 120
           LVGAVWEACS+LKK P+TN+TAIGR + QVAVS+KDVLREMKELK   SD  D+  +++S
Sbjct: 141 LVGAVWEACSALKKTPATNITAIGRTMTQVAVSMKDVLREMKELKPASSDPTDETSDEAS 200

Query: 121 SKVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKL 180
           +K ES   + +  + S + D+GNDLS EEM++A S IS+++ IL VIKELIR IT L+K 
Sbjct: 201 NKAES---IPENDDNSSEGDLGNDLSPEEMKIAVSVISVVTEILAVIKELIRCITGLVKQ 260

Query: 181 ENETNESNLA-TLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAE 240
           E+    SN   +LE LL+LCQGIGVQVDELGA LYPPQE+PA+K A+EKIS  +D +QAE
Sbjct: 261 EDANKSSNFVDSLEKLLKLCQGIGVQVDELGACLYPPQEIPAMKAAAEKISGSVDEIQAE 320

Query: 241 LGGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDL 276
           +  L G +E F+QACN LR+SL QL   +G  + +DL
Sbjct: 321 IENLGGTTETFIQACNVLRSSLGQLNSLVGDSSTADL 353

[Close]

BLAST of CmaCh04G014770.1 vs. TrEMBL
Match: A5B8A1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043108 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.1e-79
Identity = 169/277 (61.01%), Postives = 211/277 (76.17%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           MLQGFL +SHGS VGAGPTLSS IHASVKQV+DSS +L KES+S YG R+ +DQ   +PQ
Sbjct: 72  MLQGFLFLSHGSTVGAGPTLSSSIHASVKQVVDSSFRLLKESVSSYGSRN-RDQKLSIPQ 131

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSD-LDDAPEQSS 120
           LVGAVWEACS LKK P+TN+TAIGR + QVAVS+KDVLREMKELK   SD  D+  +++S
Sbjct: 132 LVGAVWEACSXLKKTPATNITAIGRTMTQVAVSMKDVLREMKELKPASSDPTDETSDEAS 191

Query: 121 SKVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKL 180
           +K ES   + +  + S + D+GNDLS EEM++A S IS+++ IL VIKELIR IT L+K 
Sbjct: 192 NKAES---IPENDDNSSEGDLGNDLSPEEMKIAVSVISVVTEILAVIKELIRCITGLVKQ 251

Query: 181 ENETNESNLA-TLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAE 240
           E+    SN   +LE LL+LCQGIGVQVDELGA LYPPQE+PA+K A+EKIS  +D +QAE
Sbjct: 252 EDANKSSNFVDSLEKLLKLCQGIGVQVDELGACLYPPQEIPAMKAAAEKISGSVDEIQAE 311

Query: 241 LGGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDL 276
           +  L G +E F+QACN LR+SL QL   +G  + +DL
Sbjct: 312 IENLGGTTETFIQACNVLRSSLGQLNSLVGDSSTADL 344

[Close]

BLAST of CmaCh04G014770.1 vs. TrEMBL
Match: A0A067FBL1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017703mg PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.9e-79
Identity = 173/291 (59.45%), Postives = 216/291 (74.23%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           MLQGF+L+SHGS VGAGPTLS  IHASVKQV+DSS KL  ESI+LYG  D+KD+  ++PQ
Sbjct: 83  MLQGFILLSHGSTVGAGPTLSLSIHASVKQVVDSSFKLMMESITLYGS-DNKDKEHLMPQ 142

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSS 120
            VGAVWEACS+LKK P+TN+TAIGRA+ QVAVS+KDVLREMKELK   SD ++      S
Sbjct: 143 YVGAVWEACSALKKTPATNITAIGRAMTQVAVSMKDVLREMKELKPSSSDQNNEASHDDS 202

Query: 121 KVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLE 180
               S H +D+ N+S D ++GNDLS+EEM+VAQ AI I+S +L VIKELIR+IT LLK E
Sbjct: 203 AKADSEHQEDD-NSSLD-ELGNDLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHE 262

Query: 181 NETNESNLA-TLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAEL 240
           N  +      TLE LL+LCQGIGVQ+DELGA LYPPQE+  IK  S KI S  D +Q E+
Sbjct: 263 NPDDGGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEV 322

Query: 241 GGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
              N +SE F+QACN LR+SLKQ++ E+  F  +DLE+++     QNV ++
Sbjct: 323 ESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAKL-----QNVAIS 365

[Close]

BLAST of CmaCh04G014770.1 vs. TAIR10
Match: AT1G22970.1 (AT1G22970.1 unknown protein)

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-66
Identity = 149/290 (51.38%), Postives = 193/290 (66.55%), Query Frame = 1


Query: 2   LQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQL 61
           LQGFLL  HGS +GAGPTLSS+IH SVKQ++DSS +L + S+SLY     KD+   +PQL
Sbjct: 82  LQGFLLCCHGSTLGAGPTLSSIIHVSVKQIVDSSFRLLQGSVSLYEGSYEKDKKPSIPQL 141

Query: 62  VGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSSK 121
            G VWEACSS KK P+TN+TAIGRAI QVAVS+KDVLREMKE+K  P+      E S   
Sbjct: 142 SGVVWEACSSFKKVPATNITAIGRAITQVAVSMKDVLREMKEVK--PACPLSECEASGDN 201

Query: 122 VESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLEN 181
           + S        +   D D+G+DLS EEM VA     I+S  + VIKELIR IT ++K+EN
Sbjct: 202 MSS--------DDDDDDDLGDDLSPEEMEVATMVTEIVSETIMVIKELIRVITGMIKMEN 261

Query: 182 -ETNESNLATLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAELG 241
            + N   + +LE LL+LCQG GVQ+DELGA +YPPQE+  +K+  + I   LD  + E+ 
Sbjct: 262 PKDNSGFVESLEKLLKLCQGTGVQIDELGACVYPPQEMNKMKQTVKVIQGNLDEFETEVE 321

Query: 242 GLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
            L  +S+GF  AC  LRNSLK +E EL    +++L   ++E   QNVTL+
Sbjct: 322 RLKSSSDGFSGACGKLRNSLKHMETELDKRCEAEL---VVE--MQNVTLD 356

[Close]

BLAST of CmaCh04G014770.1 vs. TAIR10
Match: AT1G71150.1 (AT1G71150.1 unknown protein)

HSP 1 Score: 223.4 bits (568), Expect = 1.8e-58
Identity = 135/290 (46.55%), Postives = 182/290 (62.76%), Query Frame = 1


Query: 2   LQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQL 61
           LQGFLL  HGS VGAG TLSS IHASVKQ++DSS +L + S+SLY     K +   +PQL
Sbjct: 83  LQGFLLHCHGSMVGAGTTLSSTIHASVKQIVDSSFRLLQGSVSLYEGSYEKGRKPTIPQL 142

Query: 62  VGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSSK 121
            GAVWEACS+LK  P TN+ AIGRA+  VAVS+KDVLREMKELK   S  D         
Sbjct: 143 AGAVWEACSNLKNVPETNIKAIGRAMAHVAVSMKDVLREMKELKPASSSPD--------- 202

Query: 122 VESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLEN 181
                   +    S D D+G++LS EE  VA+    I+S  L VIKELIR+IT ++KLEN
Sbjct: 203 -------HNVSTNSDDDDLGDELSPEEFEVAKMVADIVSETLVVIKELIRAITCMIKLEN 262

Query: 182 ETNESNLA-TLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAEL- 241
             + S    + E LL+LCQGIGVQ+DELGA +YPPQE   +K+  E +   +  +++++ 
Sbjct: 263 PKDNSEFVDSFEKLLKLCQGIGVQIDELGACVYPPQEFGLMKQTVENMRESIGEIESDVK 322

Query: 242 GGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTL 290
              N +SE    +C  L++ ++ +  EL    D+ +E+ ++  + QNVTL
Sbjct: 323 SSKNSSSEALSGSCRRLQSLIEHMVTEL----DTRIEAEVV-YKMQNVTL 351

[Close]

BLAST of CmaCh04G014770.1 vs. TAIR10
Match: AT1G22980.1 (AT1G22980.1 unknown protein)

HSP 1 Score: 167.9 bits (424), Expect = 9.0e-42
Identity = 119/291 (40.89%), Postives = 169/291 (58.08%), Query Frame = 1


Query: 2   LQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQL 61
           L GFLL  HGS +GAGPTLSS++H SVKQ++DSS +L++ S+SLY     K +   + QL
Sbjct: 82  LLGFLLCCHGSTLGAGPTLSSIVHGSVKQIVDSSFRLFQGSVSLYDGSYEKGEKPSISQL 141

Query: 62  VGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSSK 121
            GAV EACSS KK P+TN+ AIG AI QV+V +KDVL EMK++K         P   SS 
Sbjct: 142 SGAVLEACSSFKKVPTTNLIAIGSAISQVSVIMKDVLNEMKKVK---------PACPSS- 201

Query: 122 VESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLEN 181
                    EG  SGD     D S E++ VA+    I+   + VI  +IR IT +++ EN
Sbjct: 202 ---------EGEASGD-----DFSPEQIEVAKMVADIVYEAMTVI-IVIRVITRMMEKEN 261

Query: 182 ET-NESNLATLENLLRLCQGIGVQVDELGARLY-PPQEVPAIKEASEKISSFLDNMQAEL 241
              N   + +LE LL+LCQ  GV ++ELG  +Y PP ++  I +  + +   LD ++A++
Sbjct: 262 SNENSVFVESLEKLLKLCQRSGVVIEELGTCVYHPPLKIDKITQTVKILEGNLDEVEAQV 321

Query: 242 GGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
             +  +S  F   C  LR+++K +E+ L    D    ++IL S RQN   N
Sbjct: 322 EYMKRSSNAFPGVCRKLRDAIKLMEVGLEKRKDL---NQILIS-RQNTLYN 343

[Close]

BLAST of CmaCh04G014770.1 vs. NCBI nr
Match: gi|449434576|ref|XP_004135072.1| (PREDICTED: uncharacterized protein LOC101213885 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 5.2e-116
Identity = 231/290 (79.66%), Postives = 256/290 (88.28%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           MLQGFLLVSHGS+VGAGPTLSSVIHAS+KQ+IDSS + WKES+SLYGP+ ++D+NQV+ Q
Sbjct: 81  MLQGFLLVSHGSQVGAGPTLSSVIHASLKQIIDSSFRFWKESVSLYGPQKNQDKNQVILQ 140

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSS 120
           LVGAVW+ACS+LKKAPSTN+TAIGRAI QVAVSVKDVLREMKELKQG SDLD APE+  +
Sbjct: 141 LVGAVWDACSALKKAPSTNITAIGRAITQVAVSVKDVLREMKELKQGSSDLDKAPEEICN 200

Query: 121 KVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLE 180
            VE     QDEGNTS DADIGNDLSAEEMRVAQSAI ++SSIL VIKELIRSITSLLKLE
Sbjct: 201 AVEGDS--QDEGNTSDDADIGNDLSAEEMRVAQSAIHVVSSILLVIKELIRSITSLLKLE 260

Query: 181 NETNESNLATLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAELG 240
           N   ESNLA+LENLL+LCQGIG+QVDELGA LYPPQE PAIK ASEKISSFLDNMQ ELG
Sbjct: 261 NANKESNLASLENLLKLCQGIGLQVDELGACLYPPQEGPAIKVASEKISSFLDNMQTELG 320

Query: 241 GLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
            LNGNSEGFLQACNNLR+SLKQLE ELGGF+  DLE+R+     QNVTL+
Sbjct: 321 SLNGNSEGFLQACNNLRDSLKQLETELGGFSSPDLETRM-----QNVTLS 363

[Close]

BLAST of CmaCh04G014770.1 vs. NCBI nr
Match: gi|700196948|gb|KGN52125.1| (hypothetical protein Csa_5G611070 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 5.2e-116
Identity = 231/290 (79.66%), Postives = 256/290 (88.28%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           MLQGFLLVSHGS+VGAGPTLSSVIHAS+KQ+IDSS + WKES+SLYGP+ ++D+NQV+ Q
Sbjct: 117 MLQGFLLVSHGSQVGAGPTLSSVIHASLKQIIDSSFRFWKESVSLYGPQKNQDKNQVILQ 176

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSS 120
           LVGAVW+ACS+LKKAPSTN+TAIGRAI QVAVSVKDVLREMKELKQG SDLD APE+  +
Sbjct: 177 LVGAVWDACSALKKAPSTNITAIGRAITQVAVSVKDVLREMKELKQGSSDLDKAPEEICN 236

Query: 121 KVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLE 180
            VE     QDEGNTS DADIGNDLSAEEMRVAQSAI ++SSIL VIKELIRSITSLLKLE
Sbjct: 237 AVEGDS--QDEGNTSDDADIGNDLSAEEMRVAQSAIHVVSSILLVIKELIRSITSLLKLE 296

Query: 181 NETNESNLATLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAELG 240
           N   ESNLA+LENLL+LCQGIG+QVDELGA LYPPQE PAIK ASEKISSFLDNMQ ELG
Sbjct: 297 NANKESNLASLENLLKLCQGIGLQVDELGACLYPPQEGPAIKVASEKISSFLDNMQTELG 356

Query: 241 GLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
            LNGNSEGFLQACNNLR+SLKQLE ELGGF+  DLE+R+     QNVTL+
Sbjct: 357 SLNGNSEGFLQACNNLRDSLKQLETELGGFSSPDLETRM-----QNVTLS 399

[Close]

BLAST of CmaCh04G014770.1 vs. NCBI nr
Match: gi|659091653|ref|XP_008446659.1| (PREDICTED: uncharacterized protein LOC103489322 [Cucumis melo])

HSP 1 Score: 425.6 bits (1093), Expect = 6.8e-116
Identity = 233/290 (80.34%), Postives = 256/290 (88.28%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSS +LWKES+SLYGP++++D NQVVPQ
Sbjct: 131 MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSFRLWKESVSLYGPQNNQDPNQVVPQ 190

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSS 120
           LVGAVW+ACS+LKKAPSTN+TAIGRAI QVAVSVKDVLREMKELKQG SDLD APE+ S+
Sbjct: 191 LVGAVWDACSALKKAPSTNITAIGRAITQVAVSVKDVLREMKELKQGSSDLDKAPEELSN 250

Query: 121 KVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLE 180
            VE  L  QDE NTS DADIGNDLSAEEMRVAQSA +++SSIL VIKELIRSITSLLKLE
Sbjct: 251 AVEGDL--QDEDNTSDDADIGNDLSAEEMRVAQSATNVVSSILLVIKELIRSITSLLKLE 310

Query: 181 NETNESNLATLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAELG 240
           N   ESNLA+LENLL+ CQGIG+QVDELGA LYPPQE PAIK ASEKI SFLDNMQAEL 
Sbjct: 311 NANKESNLASLENLLKQCQGIGLQVDELGACLYPPQEGPAIKVASEKIFSFLDNMQAELE 370

Query: 241 GLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
            LNGNSEGFLQ C+NLR+SLKQLE ELGGF+  DLE+R+     QNVTL+
Sbjct: 371 SLNGNSEGFLQVCDNLRDSLKQLETELGGFSSPDLETRM-----QNVTLS 413

[Close]

BLAST of CmaCh04G014770.1 vs. NCBI nr
Match: gi|645276494|ref|XP_008243312.1| (PREDICTED: cyclin-D1-binding protein 1 homolog [Prunus mume])

HSP 1 Score: 323.6 bits (828), Expect = 3.7e-85
Identity = 186/291 (63.92%), Postives = 222/291 (76.29%), Query Frame = 1


Query: 1   MLQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQ 60
           +LQGFLL+SHGS VGAGPTL S +HASVK V+DSS KL KES+SLYG R+ KD    +PQ
Sbjct: 81  ILQGFLLLSHGSIVGAGPTLYSCVHASVKHVVDSSFKLLKESVSLYGARN-KDGKLSMPQ 140

Query: 61  LVGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSS 120
           L GAVWEACS+LKK P+TNVTAIGRA+ QVAVS+KDVLREMKELK G SDL D     SS
Sbjct: 141 LAGAVWEACSALKKTPATNVTAIGRAMTQVAVSMKDVLREMKELKPGSSDLTDEASNESS 200

Query: 121 KVESSLHLQDEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLKLE 180
            +E+ +  QD+   S D D+GNDLS EEMRVAQ AI+++S  L VIKELIR+ITSLLK E
Sbjct: 201 -IEAEIEPQDD-EISSDGDLGNDLSPEEMRVAQLAIAVVSETLVVIKELIRAITSLLKRE 260

Query: 181 NETNESNLA-TLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQAEL 240
           N  + SNL  +LE LLR+CQGIG+Q+DELGA LYPPQEVP +K A  KISSF+D+MQAEL
Sbjct: 261 NPNDSSNLVDSLEKLLRMCQGIGIQIDELGASLYPPQEVPTMKAALGKISSFVDDMQAEL 320

Query: 241 GGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
             L GN E F QACN L++SL+QLE  +G  +  DLE+R+     Q + LN
Sbjct: 321 QNLKGNLEAFCQACNCLKSSLRQLESAVGCPSTVDLETRV-----QKIDLN 363

[Close]

BLAST of CmaCh04G014770.1 vs. NCBI nr
Match: gi|658008820|ref|XP_008339603.1| (PREDICTED: cyclin-D1-binding protein 1 homolog [Malus domestica])

HSP 1 Score: 317.8 bits (813), Expect = 2.0e-83
Identity = 181/293 (61.77%), Postives = 219/293 (74.74%), Query Frame = 1


Query: 2   LQGFLLVSHGSKVGAGPTLSSVIHASVKQVIDSSSKLWKESISLYGPRDSKDQNQVVPQL 61
           LQGFLL+SHGS VGAGPTL+S +H SVKQV+D+S KLWKESISLYG R+ KD    +PQ 
Sbjct: 83  LQGFLLLSHGSTVGAGPTLASCVHTSVKQVVDTSFKLWKESISLYGARN-KDGKLSIPQW 142

Query: 62  VGAVWEACSSLKKAPSTNVTAIGRAIMQVAVSVKDVLREMKELKQGPSDLDDAPEQSSSK 121
           VGAVWEACS+LK  P+TN+TAIGRA+ +VAVSVKDVLREMKELK   SD  D      S 
Sbjct: 143 VGAVWEACSALKMTPATNITAIGRAMTKVAVSVKDVLREMKELKPASSDPTDG-----SS 202

Query: 122 VESSLHLQ---DEGNTSGDADIGNDLSAEEMRVAQSAISIISSILQVIKELIRSITSLLK 181
           +E S   +   D+   S D D+GNDLS EEMRV+Q AI+++S  L VIKELIR+I+ LLK
Sbjct: 203 IEPSTEAEIEPDDDEISSDGDLGNDLSPEEMRVSQLAIAVVSEALVVIKELIRTISGLLK 262

Query: 182 LENETNESNLA-TLENLLRLCQGIGVQVDELGARLYPPQEVPAIKEASEKISSFLDNMQA 241
           LEN    SNL  +LE LL++C+ IG+Q+DELGA LYPPQEVPAIK ASEKISSF+D+MQ+
Sbjct: 263 LENPNGGSNLVDSLEKLLKMCKEIGIQIDELGACLYPPQEVPAIKAASEKISSFVDDMQS 322

Query: 242 ELGGLNGNSEGFLQACNNLRNSLKQLEIELGGFTDSDLESRILESRRQNVTLN 291
           EL  LNGN E F QACN L++SL+QLE E+      DLE+ +     QN+ LN
Sbjct: 323 ELQNLNGNLEAFSQACNCLKSSLRQLESEVASPNTVDLETSV-----QNIDLN 364

The following BLAST results are available for this feature:

BLAST of CmaCh04G014770.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCDB1_XENLA	2.6e-06	25.00	Cyclin-D1-binding protein 1 homolog OS=Xenopus laevis GN=ccndbp1 PE=2 SV=2	[more]

BLAST of CmaCh04G014770.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR79_CUCSA	3.6e-116	79.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611070 PE=4 SV=1	[more]
A0A067FBT6_CITSI	2.1e-79	59.11	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017703mg PE=4 SV=1	[more]
D7T8X3_VITVI	3.6e-79	61.01	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04420 PE=4 SV=...	[more]
A5B8A1_VITVI	6.1e-79	61.01	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043108 PE=4 SV=1	[more]
A0A067FBL1_CITSI	7.9e-79	59.45	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017703mg PE=4 SV=1	[more]

BLAST of CmaCh04G014770.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22970.1	2.4e-66	51.38	unknown protein	[more]
AT1G71150.1	1.8e-58	46.55	unknown protein	[more]
AT1G22980.1	9.0e-42	40.89	unknown protein	[more]

BLAST of CmaCh04G014770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434576\|ref\|XP_004135072.1\|	5.2e-116	79.66	PREDICTED: uncharacterized protein LOC101213885 [Cucumis sativus]	[more]
gi\|700196948\|gb\|KGN52125.1\|	5.2e-116	79.66	hypothetical protein Csa_5G611070 [Cucumis sativus]	[more]
gi\|659091653\|ref\|XP_008446659.1\|	6.8e-116	80.34	PREDICTED: uncharacterized protein LOC103489322 [Cucumis melo]	[more]
gi\|645276494\|ref\|XP_008243312.1\|	3.7e-85	63.92	PREDICTED: cyclin-D1-binding protein 1 homolog [Prunus mume]	[more]
gi\|658008820\|ref\|XP_008339603.1\|	2.0e-83	61.77	PREDICTED: cyclin-D1-binding protein 1 homolog [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR026907	CCNDBP1

Vocabulary: **Biological Process**
Term	Definition
GO:0051726	regulation of cell cycle

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051726	regulation of cell cycle
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh04G014770	CmaCh04G014770	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh04G014770.1	CmaCh04G014770.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G014770.1.exon.1	CmaCh04G014770.1.exon.1	exon
CmaCh04G014770.1.exon.2	CmaCh04G014770.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh04G014770.1.CDS.1	CmaCh04G014770.1.CDS.1	CDS
CmaCh04G014770.1.CDS.2	CmaCh04G014770.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026907	Cyclin-D1-binding protein 1	PANTHER	PTHR15492	FAMILY NOT NAMED	coord: 1..277 score: 3.0
None	No IPR available	unknown	Coil	Coil	coord: 246..266 scor
None	No IPR available	PFAM	PF13324	GCIP	coord: 1..236 score: 4.9