CmaCh04G003970.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh04G003970.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionconserved peptide upstream open reading frame 41
LocationCma_Chr04 : 2025623 .. 2026470 (+)
Sequence length390
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTGGTTGAGCACATCCATTGATGTATTTCGCAAAGTTGTGCATTTGAACCTCTATTGTAGGGTTATTTTGTAAAGCACTTTTTATATCGGCAACACTGAATTATTCCTCCCTGAGCTCGTTCTTTCAATCAACCATGGGCTCCAATCACTTTTTTATCATTTCCTGTGATATCTATATTAGCTGAAAAGCTTCCTGTCTCTAAGCACCATTTTGCGTTCATTCTTCTGTTTTAAATTCCCTTTTTTCTGCTTCTTTGTCAAGGAATCTAAAGTTTCCTCGTTCATTTTTATCAACTAGTGAGTTTAGTTCTTTCTGCAGCGAATATTCTCCTTTTACCTTCCTCTTTCTTTGTTGTTTGTACCCTCTTGTGGCTTCTGGTATAGAGGAATTGTTATCCGTTAAGGTTCAGAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGACATTGAAACACGAGAACGGAATTGCTGGAAAACCAACGATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAATTGTCAGGTTTGTCAACTCAGTTTCTGCCCCCTGGTTTTGCGTGTTGATTAATAATTAAGTATTGGAATATTTTTACGTTTATTTTATTTGAAAATGCATCAGTAGGCTCATTGAATACCATGATCAAGCTTTTGATATTTTCCTGTTCCAGGCCGAGTATTTTCGACACTTACTTAAGCCGGTCACGTAGATTGACTAGCGTTTGTTTCTCTTTAGCTGGATTTTGTGAACCTTTTTTTCTCCTCTTCTTTGTTCCTGCAAGCATTCAGCAGTTAACTCCGATTGTAGACCAGAGCACAACATTTTGA

mRNA sequence

ATGCTTTGGTTGAGCACATCCATTGATGTATTTCGCAAAGTTGTGCATTTGAACCTCTATTGTAGGGTTATTTTGAATCTAAAGTTTCCTCGTTCATTTTTATCAACTAGTGAGTTTAGTTCTTTCTGCAGCGAATATTCTCCTTTTACCTTCCTCTTTCTTTGTTGTTTGTACCCTCTTGTGGCTTCTGGTATAGAGGAATTGTTATCCGTTAAGGTTCAGAAAATTGTCAGGCCGAGTATTTTCGACACTTACTTAAGCCGGTCACGTAGATTGACTAGCGTTTGTTTCTCTTTAGCTGGATTTTGTGAACCTTTTTTTCTCCTCTTCTTTGTTCCTGCAAGCATTCAGCAGTTAACTCCGATTGTAGACCAGAGCACAACATTTTGA

Coding sequence (CDS)

ATGCTTTGGTTGAGCACATCCATTGATGTATTTCGCAAAGTTGTGCATTTGAACCTCTATTGTAGGGTTATTTTGAATCTAAAGTTTCCTCGTTCATTTTTATCAACTAGTGAGTTTAGTTCTTTCTGCAGCGAATATTCTCCTTTTACCTTCCTCTTTCTTTGTTGTTTGTACCCTCTTGTGGCTTCTGGTATAGAGGAATTGTTATCCGTTAAGGTTCAGAAAATTGTCAGGCCGAGTATTTTCGACACTTACTTAAGCCGGTCACGTAGATTGACTAGCGTTTGTTTCTCTTTAGCTGGATTTTGTGAACCTTTTTTTCTCCTCTTCTTTGTTCCTGCAAGCATTCAGCAGTTAACTCCGATTGTAGACCAGAGCACAACATTTTGA

Protein sequence

MLWLSTSIDVFRKVVHLNLYCRVILNLKFPRSFLSTSEFSSFCSEYSPFTFLFLCCLYPLVASGIEELLSVKVQKIVRPSIFDTYLSRSRRLTSVCFSLAGFCEPFFLLFFVPASIQQLTPIVDQSTTF
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh04G003970CmaCh04G003970gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh04G003970.1CmaCh04G003970.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh04G003970.1.exon.1CmaCh04G003970.1.exon.1exon
CmaCh04G003970.1.exon.2CmaCh04G003970.1.exon.2exon
CmaCh04G003970.1.exon.3CmaCh04G003970.1.exon.3exon
CmaCh04G003970.1.exon.4CmaCh04G003970.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh04G003970.1.CDS.1CmaCh04G003970.1.CDS.1CDS
CmaCh04G003970.1.CDS.2CmaCh04G003970.1.CDS.2CDS
CmaCh04G003970.1.CDS.3CmaCh04G003970.1.CDS.3CDS
CmaCh04G003970.1.CDS.4CmaCh04G003970.1.CDS.4CDS