CmaCh03G012540.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G012540.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Mitochondrial import inner membrane translocase subunit TIM14
Location	Cma_Chr03 : 8253401 .. 8254942 (+)
Sequence length	788

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTAATATATAAAATTTGTAGGTTTTATAAAATATAGTATTACTTTTCATATTTCGGGACTTTTCTCGGCCCTGATCAAATTCGTGTTCCAGAAAACCCTAGAATCCAATTTTGGAGGAAAGCCAAGACCCATAGCCATTGAATGACATTTTTCCTTCCGTCGAGCTTGAGCGTTCTTCATTGATGGTGAGTCTTCGATCATTCTTCGTTTTCTTTTATGTTGTGTCCATGCGGCTCTGGGACTTTCCTCATCTTTTTATCTTTTCTTTTTTGCTTTCTTGTTGGTTGCTTGTATGTTTTTGTTCGAGAACTTGAAACTGCTGATTCTTTTCGAATTTAAGGCTGCGGTATTGCATTATGTATCTGTTAGTTTGCGGGGTGTGTTTGTTTTATGAGAAAATTGGAAACATTTCGGTCTAAAAACTGTATTTTGATACTCAAATCCATTTATTTCCCCAGCTAGCAAATTTTGAGTTCAATATTGTTCATTCTGATTGAATGGGATTTTGCCACTTACTTACTAGGGCTTCTGCTGCCTAAATCTTGTGGAGTAGATTCCATCGTTTCCTATTCTTGTTTAATCGTTCGGAGGATTTTTGAACTTCCTATGTTACAGAACACTGATTTTCGCCGCTTCTGTTCTATTGGCAACTACTCTAATATTTTGTGTGTGTGTGTGTGTGTGAATCATTGTAGGCTACACCATTGATTACAGGAATTGCTGTTGCTGCAGCAGCTTACGCTGGTAGATATGGTCTTCAGGCTTGGCAGGCATTCAAGGCGAGGCCGCCAACAGCACGACTGCGCAAGTTCTATGAAGGTGGCTTTCAGCCTACAATGACAAGGAGGGAGGCAGCTTTAATTCTTGGAGTTAGGTATTTACTGAGTCTTATATGAGACAATCAAACTCCTGCCCCTCATAGCTCCATTAGTTTTCCTCCTATTTTTGTTTTCATCTTCTTGGCTGTGTTTAAATGTTAAACCCCTTTTGAAGATAGAATATCTGTGCGCGCGCGTGCTTTAGAGTTATCATTCATCATAATGATCTGCGTACTCTCCCTATTGCGTCTACCCTGTGCCTGCCCGTGTCTAAGATTTTATTTTCATTTATATTGTCAGGGAGAGCACTCCAACAGAAAAGGTGAAAGAAGCGCACAGGAAGGTGATGGTTGCAAATCATCCAGATGCCGGTGGCAGCCATTATCTTGCTTCCAAGATCAATGAGGCCAAAGACATCCTGCTTGGGAAAACCAGAGGAAGCAATTCTGCATTCTGATGGTCGTTGCTGCCAGTTATTTGTTCACTTAGCAAGCATATCTCAACAAAACGCCGAGGACCGCCAATTTTCTTGCTTACCTGGTGTGCCAAAATTTTTACATTAATTAAATTTACTTATGTCTGATCGATTCCTAGAGATCTCATATGTATACTTCCTACTCTGGATTTATTGAAAACAATGAGAAATCCTGTTAGTTTGACTGTGATTACTTGCTCTTTAGCAATAATGTATTATGGATAAGCTTCTTCCTATAAATTCTGGG

mRNA sequence

CGTTAATATATAAAATTTGTAGGTTTTATAAAATATAGTATTACTTTTCATATTTCGGGACTTTTCTCGGCCCTGATCAAATTCGTGTTCCAGAAAACCCTAGAATCCAATTTTGGAGGAAAGCCAAGACCCATAGCCATTGAATGACATTTTTCCTTCCGTCGAGCTTGAGCGTTCTTCATTGATGGCTACACCATTGATTACAGGAATTGCTGTTGCTGCAGCAGCTTACGCTGGTAGATATGGTCTTCAGGCTTGGCAGGCATTCAAGGCGAGGCCGCCAACAGCACGACTGCGCAAGTTCTATGAAGGTGGCTTTCAGCCTACAATGACAAGGAGGGAGGCAGCTTTAATTCTTGGAGTTAGGGAGAGCACTCCAACAGAAAAGGTGAAAGAAGCGCACAGGAAGGTGATGGTTGCAAATCATCCAGATGCCGGTGGCAGCCATTATCTTGCTTCCAAGATCAATGAGGCCAAAGACATCCTGCTTGGGAAAACCAGAGGAAGCAATTCTGCATTCTGATGGTCGTTGCTGCCAGTTATTTGTTCACTTAGCAAGCATATCTCAACAAAACGCCGAGGACCGCCAATTTTCTTGCTTACCTGGTGTGCCAAAATTTTTACATTAATTAAATTTACTTATGTCTGATCGATTCCTAGAGATCTCATATGTATACTTCCTACTCTGGATTTATTGAAAACAATGAGAAATCCTGTTAGTTTGACTGTGATTACTTGCTCTTTAGCAATAATGTATTATGGATAAGCTTCTTCCTATAAATTCTGGG

Coding sequence (CDS)

ATGGCTACACCATTGATTACAGGAATTGCTGTTGCTGCAGCAGCTTACGCTGGTAGATATGGTCTTCAGGCTTGGCAGGCATTCAAGGCGAGGCCGCCAACAGCACGACTGCGCAAGTTCTATGAAGGTGGCTTTCAGCCTACAATGACAAGGAGGGAGGCAGCTTTAATTCTTGGAGTTAGGGAGAGCACTCCAACAGAAAAGGTGAAAGAAGCGCACAGGAAGGTGATGGTTGCAAATCATCCAGATGCCGGTGGCAGCCATTATCTTGCTTCCAAGATCAATGAGGCCAAAGACATCCTGCTTGGGAAAACCAGAGGAAGCAATTCTGCATTCTGA

Protein sequence

MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGVRESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF

Homology

[Close]

BLAST of CmaCh03G012540.1 vs. Swiss-Prot
Match: TI141_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-1 OS=Arabidopsis thaliana GN=TIM14-1 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.4e-47
Identity = 91/112 (81.25%), Postives = 101/112 (90.18%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           MATP I G+AVAA A AGRYG+QAWQAFKARPP  +++KFYEGGFQPTMT+REAALILGV
Sbjct: 1   MATPFIAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RES   EKVKEAHRKVMVANHPDAGGSH+LASKINEAKD++LGKT+ S SAF
Sbjct: 61  RESVAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVMLGKTKNSGSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. Swiss-Prot
Match: TI143_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-3 OS=Arabidopsis thaliana GN=TIM14-3 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-43
Identity = 88/112 (78.57%), Postives = 98/112 (87.50%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           MATP+I G AVAAAA AGRYG+ AWQAFKARP   R+R+FYEGGFQ +MTRREAALILGV
Sbjct: 1   MATPMIAGAAVAAAAVAGRYGILAWQAFKARPRVPRMRRFYEGGFQSSMTRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RES   +KVKEAHR+VMVANHPDAGGSHYLASKINEAKD++LGK+  S SAF
Sbjct: 61  RESVVADKVKEAHRRVMVANHPDAGGSHYLASKINEAKDMMLGKSNNSGSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. Swiss-Prot
Match: TI142_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-2 OS=Arabidopsis thaliana GN=TIM14-2 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-43
Identity = 87/112 (77.68%), Postives = 96/112 (85.71%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           M   +I G AVAAAAYAG+YG++AWQAFK RP   R+RKFYEGGFQ TM RREAALILGV
Sbjct: 1   MVAAIIAGAAVAAAAYAGKYGIEAWQAFKLRPVRPRMRKFYEGGFQATMNRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RES   EKVKEAHR+VMVANHPDAGGSHYLASKINEAKD++LGKT+ S SAF
Sbjct: 61  RESVAAEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDMMLGKTKNSGSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. Swiss-Prot
Match: TIM14_BOVIN (Mitochondrial import inner membrane translocase subunit TIM14 OS=Bos taurus GN=DNAJC19 PE=3 SV=3)

HSP 1 Score: 110.9 bits (276), Expect = 9.0e-24
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 1


Query: 2   ATPLITGIAVAAAAYAGRYGLQAW--------QAFKARPPTARLRKFYEGGFQPTMTRRE 61
           +T +  G+ +AAA +AGRY LQA         Q F++ P TA    +Y GGF+P MT+RE
Sbjct: 3   STVVAVGLTIAAAGFAGRYALQAMKHMEPQVKQVFQSLPKTAFSGGYYRGGFEPKMTKRE 62

Query: 62  AALILGVRESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTR 107
           AALILGV  +    K+++AHR++M+ NHPD GGS Y+A+KINEAKD+L G+ +
Sbjct: 63  AALILGVSPTANKAKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115

[Close]

BLAST of CmaCh03G012540.1 vs. Swiss-Prot
Match: TIM14_PONAB (Mitochondrial import inner membrane translocase subunit TIM14 OS=Pongo abelii GN=DNAJC19 PE=3 SV=3)

HSP 1 Score: 107.8 bits (268), Expect = 7.6e-23
Identity = 55/113 (48.67%), Postives = 78/113 (69.03%), Query Frame = 1


Query: 2   ATPLITGIAVAAAAYAGRYGLQAW--------QAFKARPPTARLRKFYEGGFQPTMTRRE 61
           +T +  G+ +AAA +AGRY LQA         Q F++ P +A    +Y GGF+P MT+RE
Sbjct: 3   STVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKRE 62

Query: 62  AALILGVRESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTR 107
           AALILGV  +    K+++AHR++M+ NHPD GGS Y+A+KINEAKD+L G+ +
Sbjct: 63  AALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115

[Close]

BLAST of CmaCh03G012540.1 vs. TrEMBL
Match: A0A0A0KZD3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G292450 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 7.6e-54
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           MATPLITGIAVAAAAYAGRYG+QAWQAFK RPPTARLRKFYEGGFQPTMTRREAALILGV
Sbjct: 1   MATPLITGIAVAAAAYAGRYGIQAWQAFKMRPPTARLRKFYEGGFQPTMTRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RESTPT+KVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF
Sbjct: 61  RESTPTDKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. TrEMBL
Match: V4URD8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013153mg PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 5.6e-49
Identity = 98/112 (87.50%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           M  PLI G+AVAAAAYAG+YG++AWQAFKARPPTAR+RKFYEGGFQP MTRREAALILGV
Sbjct: 1   MVAPLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RESTPTEKVKEAHR+VMVANHPDAGGSHYLASKINEAKDI+L +T+GSNSAF
Sbjct: 61  RESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. TrEMBL
Match: V4ST07_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013153mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-48
Identity = 97/109 (88.99%), Postives = 106/109 (97.25%), Query Frame = 1


Query: 4   PLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGVRES 63
           PLI G+AVAAAAYAG+YG++AWQAFKARPPTAR+RKFYEGGFQP MTRREAALILGVRES
Sbjct: 7   PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRES 66

Query: 64  TPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           TPTEKVKEAHR+VMVANHPDAGGSHYLASKINEAKDI+L +T+GSNSAF
Sbjct: 67  TPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNSAF 115

[Close]

BLAST of CmaCh03G012540.1 vs. TrEMBL
Match: A0A067EJN6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0336282mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-48
Identity = 97/109 (88.99%), Postives = 106/109 (97.25%), Query Frame = 1


Query: 4   PLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGVRES 63
           PLI G+AVAAAAYAG+YG++AWQAFKARPPTAR+RKFYEGGFQP MTRREAALILGVRES
Sbjct: 3   PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRES 62

Query: 64  TPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           TPTEKVKEAHR+VMVANHPDAGGSHYLASKINEAKDI+L +T+GSNSAF
Sbjct: 63  TPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNSAF 111

[Close]

BLAST of CmaCh03G012540.1 vs. TrEMBL
Match: A0A067EVQ7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0336282mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-48
Identity = 97/109 (88.99%), Postives = 106/109 (97.25%), Query Frame = 1


Query: 4   PLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGVRES 63
           PLI G+AVAAAAYAG+YG++AWQAFKARPPTAR+RKFYEGGFQP MTRREAALILGVRES
Sbjct: 6   PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRES 65

Query: 64  TPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           TPTEKVKEAHR+VMVANHPDAGGSHYLASKINEAKDI+L +T+GSNSAF
Sbjct: 66  TPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNSAF 114

[Close]

BLAST of CmaCh03G012540.1 vs. TAIR10
Match: AT2G35795.1 (AT2G35795.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 188.3 bits (477), Expect = 2.5e-48
Identity = 91/112 (81.25%), Postives = 101/112 (90.18%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           MATP I G+AVAA A AGRYG+QAWQAFKARPP  +++KFYEGGFQPTMT+REAALILGV
Sbjct: 1   MATPFIAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RES   EKVKEAHRKVMVANHPDAGGSH+LASKINEAKD++LGKT+ S SAF
Sbjct: 61  RESVAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVMLGKTKNSGSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. TAIR10
Match: AT5G03030.1 (AT5G03030.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 176.8 bits (447), Expect = 7.5e-45
Identity = 88/112 (78.57%), Postives = 98/112 (87.50%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           MATP+I G AVAAAA AGRYG+ AWQAFKARP   R+R+FYEGGFQ +MTRREAALILGV
Sbjct: 1   MATPMIAGAAVAAAAVAGRYGILAWQAFKARPRVPRMRRFYEGGFQSSMTRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RES   +KVKEAHR+VMVANHPDAGGSHYLASKINEAKD++LGK+  S SAF
Sbjct: 61  RESVVADKVKEAHRRVMVANHPDAGGSHYLASKINEAKDMMLGKSNNSGSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. TAIR10
Match: AT3G09700.1 (AT3G09700.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 1.3e-44
Identity = 87/112 (77.68%), Postives = 96/112 (85.71%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           M   +I G AVAAAAYAG+YG++AWQAFK RP   R+RKFYEGGFQ TM RREAALILGV
Sbjct: 1   MVAAIIAGAAVAAAAYAGKYGIEAWQAFKLRPVRPRMRKFYEGGFQATMNRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RES   EKVKEAHR+VMVANHPDAGGSHYLASKINEAKD++LGKT+ S SAF
Sbjct: 61  RESVAAEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDMMLGKTKNSGSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. NCBI nr
Match: gi|778693215|ref|XP_011653595.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1-like [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           MATPLITGIAVAAAAYAGRYG+QAWQAFK RPPTARLRKFYEGGFQPTMTRREAALILGV
Sbjct: 1   MATPLITGIAVAAAAYAGRYGIQAWQAFKMRPPTARLRKFYEGGFQPTMTRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RESTPT+KVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF
Sbjct: 61  RESTPTDKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. NCBI nr
Match: gi|659096769|ref|XP_008449278.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 4.1e-53
Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           MATPLITGIAVAAAAYAGRYG+QAWQAFK RPPT RLRKFYEGGFQPTMTRREAALILG+
Sbjct: 1   MATPLITGIAVAAAAYAGRYGIQAWQAFKMRPPTVRLRKFYEGGFQPTMTRREAALILGI 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RESTPT+KVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF
Sbjct: 61  RESTPTDKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. NCBI nr
Match: gi|802737802|ref|XP_012086854.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1-like [Jatropha curcas])

HSP 1 Score: 204.9 bits (520), Expect = 7.3e-50
Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           MATPLI G+AVAAAAYAGRYG+QAWQAFKARPPTARLR+FYEGGFQP MT+REAALILGV
Sbjct: 1   MATPLIAGMAVAAAAYAGRYGIQAWQAFKARPPTARLRRFYEGGFQPVMTKREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RESTPT+KVKEAHR+VMVANHPDAGGSHYLASKINEAKDILLGK +GS SAF
Sbjct: 61  RESTPTDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDILLGKGKGSGSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. NCBI nr
Match: gi|645220219|ref|XP_008239236.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1-like [Prunus mume])

HSP 1 Score: 201.8 bits (512), Expect = 6.2e-49
Identity = 100/112 (89.29%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           M TPLI GIAVAAAAYAGRY +QAWQAFKARPPTARLRKFYEGGFQ TMTRREAALILGV
Sbjct: 1   MVTPLIGGIAVAAAAYAGRYSIQAWQAFKARPPTARLRKFYEGGFQSTMTRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RESTPT+KV+EAHR+VMVANHPDAGGSHYLASKINEAKDILLG+T+G+ SAF
Sbjct: 61  RESTPTDKVREAHRRVMVANHPDAGGSHYLASKINEAKDILLGRTKGTGSAF 112

[Close]

BLAST of CmaCh03G012540.1 vs. NCBI nr
Match: gi|567872539|ref|XP_006428859.1| (hypothetical protein CICLE_v10013153mg [Citrus clementina])

HSP 1 Score: 201.4 bits (511), Expect = 8.1e-49
Identity = 98/112 (87.50%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MATPLITGIAVAAAAYAGRYGLQAWQAFKARPPTARLRKFYEGGFQPTMTRREAALILGV 60
           M  PLI G+AVAAAAYAG+YG++AWQAFKARPPTAR+RKFYEGGFQP MTRREAALILGV
Sbjct: 1   MVAPLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGV 60

Query: 61  RESTPTEKVKEAHRKVMVANHPDAGGSHYLASKINEAKDILLGKTRGSNSAF 113
           RESTPTEKVKEAHR+VMVANHPDAGGSHYLASKINEAKDI+L +T+GSNSAF
Sbjct: 61  RESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNSAF 112

The following BLAST results are available for this feature:

BLAST of CmaCh03G012540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TI141_ARATH	4.4e-47	81.25	Mitochondrial import inner membrane translocase subunit TIM14-1 OS=Arabidopsis t...	[more]
TI143_ARATH	1.3e-43	78.57	Mitochondrial import inner membrane translocase subunit TIM14-3 OS=Arabidopsis t...	[more]
TI142_ARATH	2.3e-43	77.68	Mitochondrial import inner membrane translocase subunit TIM14-2 OS=Arabidopsis t...	[more]
TIM14_BOVIN	9.0e-24	49.56	Mitochondrial import inner membrane translocase subunit TIM14 OS=Bos taurus GN=D...	[more]
TIM14_PONAB	7.6e-23	48.67	Mitochondrial import inner membrane translocase subunit TIM14 OS=Pongo abelii GN...	[more]

BLAST of CmaCh03G012540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZD3_CUCSA	7.6e-54	97.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G292450 PE=4 SV=1	[more]
V4URD8_9ROSI	5.6e-49	87.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013153mg PE=4 SV=1	[more]
V4ST07_9ROSI	1.6e-48	88.99	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013153mg PE=4 SV=1	[more]
A0A067EJN6_CITSI	1.6e-48	88.99	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0336282mg PE=4 ...	[more]
A0A067EVQ7_CITSI	1.6e-48	88.99	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0336282mg PE=4 ...	[more]

BLAST of CmaCh03G012540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35795.1	2.5e-48	81.25	Chaperone DnaJ-domain superfamily protein	[more]
AT5G03030.1	7.5e-45	78.57	Chaperone DnaJ-domain superfamily protein	[more]
AT3G09700.1	1.3e-44	77.68	Chaperone DnaJ-domain superfamily protein	[more]

BLAST of CmaCh03G012540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778693215\|ref\|XP_011653595.1\|	1.1e-53	97.32	PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1-like ...	[more]
gi\|659096769\|ref\|XP_008449278.1\|	4.1e-53	95.54	PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Cucu...	[more]
gi\|802737802\|ref\|XP_012086854.1\|	7.3e-50	90.18	PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1-like ...	[more]
gi\|645220219\|ref\|XP_008239236.1\|	6.2e-49	89.29	PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1-like ...	[more]
gi\|567872539\|ref\|XP_006428859.1\|	8.1e-49	87.50	hypothetical protein CICLE_v10013153mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001623	DnaJ_domain

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G012540	CmaCh03G012540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G012540.1	CmaCh03G012540.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G012540.1.exon.3	CmaCh03G012540.1.exon.3	exon
CmaCh03G012540.1.exon.2	CmaCh03G012540.1.exon.2	exon
CmaCh03G012540.1.exon.1	CmaCh03G012540.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G012540.1.five_prime_UTR.1	CmaCh03G012540.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G012540.1.CDS.1	CmaCh03G012540.1.CDS.1	CDS
CmaCh03G012540.1.CDS.2	CmaCh03G012540.1.CDS.2	CDS
CmaCh03G012540.1.CDS.3	CmaCh03G012540.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G012540.1.three_prime_UTR.1	CmaCh03G012540.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	GENE3D	G3DSA:1.10.287.110		coord: 43..106 score: 1.5
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 52..106 score: 4.
IPR001623	DnaJ domain	PROFILE	PS50076	DNAJ_2	coord: 53..112 score: 8
IPR001623	DnaJ domain	unknown	SSF46565	Chaperone J-domain	coord: 43..104 score: 6.8
None	No IPR available	PANTHER	PTHR12763	UNCHARACTERIZED	coord: 1..112 score: 3.2
None	No IPR available	PANTHER	PTHR12763:SF30	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM14-1	coord: 1..112 score: 3.2