CmaCh03G008870.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G008870.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pentatricopeptide repeat-containing protein, putative
Location	Cma_Chr03 : 6524406 .. 6526352 (-)
Sequence length	1947

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAGATTTTACCGGAGAACCATTTCTCTCTTCAACAATCCACCATCTGCATTACTACTCACGAAATCGAACAGCCCATTAACCTTCTTTCTCAGAAAACCGCACTTGTCTCTCTCTCTGTCGCTAATAAGTTCTCACACGAATCCCAATTGCACAACAGAGACTGGAGGTTTTGGGCCTATTCACCTGAAAACTACTCCGCATGACTCCACCAATGATAGAGACGCCGACGAATTTTCCGCTGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTCGTTTTACGCTCTGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCCGGAAACTTGGGTTACCGGTTTTTCGTCTGGGCTTCGAAGCAACCGGGTTACAGGCATAGTTATGAAGTGTATAGAGCTATGATTAAAACCTTGGGGAAGATGAGACAGTTCGGAGCCGTTTGGGCGCTGATTGAGGAAATGAGAAAAGAGAATCCATACATGTTAACGCCTGAAGTGTTCATTGTTTTGATGAGGAGGTTCGCTTCCGCCAGAATGGTAAAGAAAGCAGTTGAGGTGCTTGATGAAATGCCCAAGTATGGGTGCGAACCTGATGAGTACGTATTTGGGTGTCTTCTTGATGCTTTGTGTAAAAATGGCAGTGTTAAAGAAGCAGCTTCGCTATTTGAAGATATGAGAATTCGGTTTAATCCCACTCTGAGACATTTCACATCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAAGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCGGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGGAAAATGCGGGATGCTTTTGATCTGTTGGAGCAAATGAAGAAAGTGAACTGCGGGCCAAATGCAGCTTCTTATACAATTCTGATTCAGGCGTTCTGTAAGATGGAAAAGATGGACGAGGCAATGCGTATTTTGGTCGAAATGCAAGGGAGGGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGTGGGAACACAGACAGAGCATATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAACAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATTGGTTGCTTACCAGACCTTAACATATATAATACAGTCATAAGGTTAGTATGCAAGTTGGGGGAGCTCAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCTGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAATTGAAGCTTGTGATTACTTCAAAGATATGGTTGAAAGAGGTCTATTATCTGCTCCACAGTATGGTACTTTGAAGGAACTAACAAATGCTCTTTTGAGAGATCAAAAGCTTGAATTGGCAAAAAACATGTGGAGTTGTATTACTACTAAAGGAGGTGAACTTAATGTCAGTGCTTGGACAATTTGGATTCACGCACTTTTTTCGAACGGGCATGTGAAGGAGGCTTGTTCTTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCGGATACTTTTGCTAAGCTTATGCGTGGACTGAAGAAACTTTACAATAGACAACTAGCTGTAGAGATCACAGATAAGGTGAGGAAGATGGCTGCAGATAGGAACATCACTTTCAAGATGTATAAGAGGCGAGGGGAGAGAGATTTAAAAGAGAAAATCAAGGCCAAAGTAGATGGAAGGAAAAGAAGAGCACGTAAACGCCGCTGGGGTGGAGTGCACAAAAAGACTAAATCCCTGTAA

mRNA sequence

ATGCACAGATTTTACCGGAGAACCATTTCTCTCTTCAACAATCCACCATCTGCATTACTACTCACGAAATCGAACAGCCCATTAACCTTCTTTCTCAGAAAACCGCACTTGTCTCTCTCTCTGTCGCTAATAAGTTCTCACACGAATCCCAATTGCACAACAGAGACTGGAGGTTTTGGGCCTATTCACCTGAAAACTACTCCGCATGACTCCACCAATGATAGAGACGCCGACGAATTTTCCGCTGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTCGTTTTACGCTCTGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCCGGAAACTTGGGTTACCGGTTTTTCGTCTGGGCTTCGAAGCAACCGGGTTACAGGCATAGTTATGAAGTGTATAGAGCTATGATTAAAACCTTGGGGAAGATGAGACAGTTCGGAGCCGTTTGGGCGCTGATTGAGGAAATGAGAAAAGAGAATCCATACATGTTAACGCCTGAAGTGTTCATTGTTTTGATGAGGAGGTTCGCTTCCGCCAGAATGGTAAAGAAAGCAGTTGAGGTGCTTGATGAAATGCCCAAGTATGGGTGCGAACCTGATGAGTACGTATTTGGGTGTCTTCTTGATGCTTTGTGTAAAAATGGCAGTGTTAAAGAAGCAGCTTCGCTATTTGAAGATATGAGAATTCGGTTTAATCCCACTCTGAGACATTTCACATCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAAGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCGGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGGAAAATGCGGGATGCTTTTGATCTGTTGGAGCAAATGAAGAAAGTGAACTGCGGGCCAAATGCAGCTTCTTATACAATTCTGATTCAGGCGTTCTGTAAGATGGAAAAGATGGACGAGGCAATGCGTATTTTGGTCGAAATGCAAGGGAGGGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGTGGGAACACAGACAGAGCATATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAACAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATTGGTTGCTTACCAGACCTTAACATATATAATACAGTCATAAGGTTAGTATGCAAGTTGGGGGAGCTCAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCTGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAATTGAAGCTTGTGATTACTTCAAAGATATGGTTGAAAGAGGTCTATTATCTGCTCCACAGTATGGTACTTTGAAGGAACTAACAAATGCTCTTTTGAGAGATCAAAAGCTTGAATTGGCAAAAAACATGTGGAGTTGTATTACTACTAAAGGAGGTGAACTTAATGTCAGTGCTTGGACAATTTGGATTCACGCACTTTTTTCGAACGGGCATGTGAAGGAGGCTTGTTCTTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCGGATACTTTTGCTAAGCTTATGCGTGGACTGAAGAAACTTTACAATAGACAACTAGCTGTAGAGATCACAGATAAGGTGAGGAAGATGGCTGCAGATAGGAACATCACTTTCAAGATGTATAAGAGGCGAGGGGAGAGAGATTTAAAAGAGAAAATCAAGGCCAAAGTAGATGGAAGGAAAAGAAGAGCACGTAAACGCCGCTGGGGTGGAGTGCACAAAAAGACTAAATCCCTGTAA

Coding sequence (CDS)

ATGCACAGATTTTACCGGAGAACCATTTCTCTCTTCAACAATCCACCATCTGCATTACTACTCACGAAATCGAACAGCCCATTAACCTTCTTTCTCAGAAAACCGCACTTGTCTCTCTCTCTGTCGCTAATAAGTTCTCACACGAATCCCAATTGCACAACAGAGACTGGAGGTTTTGGGCCTATTCACCTGAAAACTACTCCGCATGACTCCACCAATGATAGAGACGCCGACGAATTTTCCGCTGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTCGTTTTACGCTCTGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCCGGAAACTTGGGTTACCGGTTTTTCGTCTGGGCTTCGAAGCAACCGGGTTACAGGCATAGTTATGAAGTGTATAGAGCTATGATTAAAACCTTGGGGAAGATGAGACAGTTCGGAGCCGTTTGGGCGCTGATTGAGGAAATGAGAAAAGAGAATCCATACATGTTAACGCCTGAAGTGTTCATTGTTTTGATGAGGAGGTTCGCTTCCGCCAGAATGGTAAAGAAAGCAGTTGAGGTGCTTGATGAAATGCCCAAGTATGGGTGCGAACCTGATGAGTACGTATTTGGGTGTCTTCTTGATGCTTTGTGTAAAAATGGCAGTGTTAAAGAAGCAGCTTCGCTATTTGAAGATATGAGAATTCGGTTTAATCCCACTCTGAGACATTTCACATCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAAGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCGGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGGAAAATGCGGGATGCTTTTGATCTGTTGGAGCAAATGAAGAAAGTGAACTGCGGGCCAAATGCAGCTTCTTATACAATTCTGATTCAGGCGTTCTGTAAGATGGAAAAGATGGACGAGGCAATGCGTATTTTGGTCGAAATGCAAGGGAGGGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGTGGGAACACAGACAGAGCATATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAACAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATTGGTTGCTTACCAGACCTTAACATATATAATACAGTCATAAGGTTAGTATGCAAGTTGGGGGAGCTCAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCTGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAATTGAAGCTTGTGATTACTTCAAAGATATGGTTGAAAGAGGTCTATTATCTGCTCCACAGTATGGTACTTTGAAGGAACTAACAAATGCTCTTTTGAGAGATCAAAAGCTTGAATTGGCAAAAAACATGTGGAGTTGTATTACTACTAAAGGAGGTGAACTTAATGTCAGTGCTTGGACAATTTGGATTCACGCACTTTTTTCGAACGGGCATGTGAAGGAGGCTTGTTCTTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCGGATACTTTTGCTAAGCTTATGCGTGGACTGAAGAAACTTTACAATAGACAACTAGCTGTAGAGATCACAGATAAGGTGAGGAAGATGGCTGCAGATAGGAACATCACTTTCAAGATGTATAAGAGGCGAGGGGAGAGAGATTTAAAAGAGAAAATCAAGGCCAAAGTAGATGGAAGGAAAAGAAGAGCACGTAAACGCCGCTGGGGTGGAGTGCACAAAAAGACTAAATCCCTGTAA

Protein sequence

MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFGPIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGVHKKTKSL

Homology

[Close]

BLAST of CmaCh03G008870.1 vs. Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 1.9e-235
Identity = 409/652 (62.73%), Postives = 506/652 (77.61%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           M RF      L +  PS+    ++NS +    ++ H+S  L+    +     T    G G
Sbjct: 1   MRRFSTIVDLLISKKPSS----QANSRIDLICKRFHISRVLN----NDFVESTERKNGVG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
            +           ++  DEF+ +VEK+YRILR  H+RVPKLELAL ESG+ LR GL  RV
Sbjct: 61  LV---------CPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           LSRCGDAGNLGYRFF+WA+KQPGY HSYEV ++M+  L KMRQFGAVW LIEEMRK NP 
Sbjct: 121 LSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPE 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           ++ PE+F+VLMRRFASA MVKKAVEVLDEMPKYG EPDEYVFGCLLDALCKNGSVKEA+ 
Sbjct: 181 LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           +FEDMR +F P LR+FTSLLYGWCREGK++EAK VLVQ+KEAG EPDIVV+ NLL GYA 
Sbjct: 241 VFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 300

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEK-MDEAMRILVEMQGRGCEADVV 360
           AGKM DA+DL+  M+K    PN   YT+LIQA C+ EK MDEAMR+ VEM+  GCEAD+V
Sbjct: 301 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 360

Query: 361 TYTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEM 420
           TYT LISGFCK G  D+ Y +LD+M +KG  PSQ++Y+ IM+AHEKKEQ EEC+EL+E+M
Sbjct: 361 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 420

Query: 421 RKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCL 480
           ++ GC PDL IYN VIRL CKLGE+KEAVRLW EMEA GL+PG+DT+++M++GF SQG L
Sbjct: 421 KRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFL 480

Query: 481 IEACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGG--ELNVSA 540
           IEAC++FK+MV RG+ SAPQYGTLK L N L+RD KLE+AK++WSCI+ K    ELNVSA
Sbjct: 481 IEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSA 540

Query: 541 WTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVR 600
           WTIWIHAL++ GHVKEACSYCLDMM+ DLMPQP+T+AKLM+GL KLYNR +A EIT+KV 
Sbjct: 541 WTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVV 600

Query: 601 KMAADRNITFKMYKRRGERDLKEKIKAK--VDGRKRRARKRRWGGVHKKTKS 648
           KMA++R ++FKMYK++GE DL EK K K   +G+K+    +R+ G  +++++
Sbjct: 601 KMASEREMSFKMYKKKGEEDLIEKAKPKGNKEGKKKGTDHQRYKGRGERSRA 635

[Close]

BLAST of CmaCh03G008870.1 vs. Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 1.9e-235
Identity = 405/638 (63.48%), Postives = 500/638 (78.37%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           MHRF      L +     L  ++  S      R  H+S +L      +N        G G
Sbjct: 8   MHRFSPIVEFLLSKRQIFLHYSQFKSRFDLIHRSFHVSRALEDNFRRSN--------GIG 67

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
            + L+ + +D T +   DEF++DVEK YRILRKFH+RVPKLELAL ESGV LR GL ERV
Sbjct: 68  LVCLEKSHNDRTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERV 127

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           L+RCGDAGNLGYRFFVWA+KQP Y HS EVY++M+K L KMRQFGAVW LIEEMRKENP 
Sbjct: 128 LNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQ 187

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           ++ PE+F+VL++RFASA MVKKA+EVLDEMPK+G EPDEYVFGCLLDALCK+GSVK+AA 
Sbjct: 188 LIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK 247

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RF   LR+FTSLLYGWCR GK++EAK+VLVQ+ EAGFEPDIV Y NLL GYA 
Sbjct: 248 LFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYAN 307

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKM DA+DLL  M++    PNA  YT+LIQA CK+++M+EAM++ VEM+   CEADVVT
Sbjct: 308 AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVT 367

Query: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YT L+SGFCK G  D+ Y +LD+MI+KG  PS+L+Y+ IM+AHEKKE  EEC+ELME+MR
Sbjct: 368 YTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMR 427

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           +I   PD+ IYN VIRL CKLGE+KEAVRLW EME  GL+PG+DT+++M++G  SQGCL+
Sbjct: 428 QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 487

Query: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGG-ELNVSAWT 540
           EA D+FK+MV RGL S  QYGTLK L N +L+D+KLE+AK++WSCIT+KG  ELNV +WT
Sbjct: 488 EASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWT 547

Query: 541 IWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKM 600
           IWIHALFS G+ KEACSYC++M++ D MPQPDTFAKLM+GLKKLYNR+ A EIT+KVR M
Sbjct: 548 IWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNM 607

Query: 601 AADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRR 638
           AA+R ++FKMYKRRG +DL EK K+K D   ++ ++ R
Sbjct: 608 AAEREMSFKMYKRRGVQDLTEKAKSKQDREGKKKQRSR 637

[Close]

BLAST of CmaCh03G008870.1 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 3.1e-68
Identity = 143/441 (32.43%), Postives = 247/441 (56.01%), Query Frame = 1


Query: 83  DVEKVYRILRKFHTRVPKLEL--ALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASK 142
           DV  V + + K     P+L L  AL +SG+ +   + E VL+R  +AG L YRFF W+ K
Sbjct: 67  DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 126

Query: 143 QPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMV 202
           Q  Y HS   Y  MI++  K+RQ+  +W LI  MRK+   ML  E F ++MR++A A+ V
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKV 186

Query: 203 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLL 262
            +A+   + M KY   P+   F  LL ALCK+ +V++A  +FE+MR RF P  + ++ LL
Sbjct: 187 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILL 246

Query: 263 YGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMKKVNCG 322
            GW +E  + +A+ V  ++ +AG  PDIV Y+ ++    +AG++ +A  ++  M    C 
Sbjct: 247 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 306

Query: 323 PNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGNTDRAYEI 382
           P    Y++L+  +    +++EA+   +EM+  G +ADV  + +LI  FCK       Y +
Sbjct: 307 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 366

Query: 383 LDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCK 442
           L  M  KG  P+  S   I+    ++ + +E  ++  +M K+ C PD + Y  VI++ C+
Sbjct: 367 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCE 426

Query: 443 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLL-SAPQ 502
             E++ A ++W  M   G+ P + T+ V+++G   +    +AC   ++M+E G+  S   
Sbjct: 427 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 486

Query: 503 YGTLKELTNALLRDQKLELAK 521
           +G L++L   L+++++ ++ K
Sbjct: 487 FGRLRQL---LIKEEREDVLK 501

[Close]

BLAST of CmaCh03G008870.1 vs. Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.7e-64
Identity = 128/419 (30.55%), Postives = 231/419 (55.13%), Query Frame = 1


Query: 77  ADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFV 136
           A++ S D E++ +IL KF     K+E  L E+ V L   L E VL +  +AG L    F 
Sbjct: 59  ANDASQDAERICKILTKFTDS--KVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFK 118

Query: 137 WASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFAS 196
           WA  Q G++H+   Y A+I++LGK++QF  +W+L+++M+ +   +L+ E F ++ RR+A 
Sbjct: 119 WAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK--LLSKETFALISRRYAR 178

Query: 197 ARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RIRFNPTLRH 256
           AR VK+A+    +M ++G + +   F  +LD L K+ +V +A  +F+ M + RF P ++ 
Sbjct: 179 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 238

Query: 257 FTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMK 316
           +T LL GW +E  +L    V  ++K+ GFEPD+V Y  ++  + +A K  +A     +M+
Sbjct: 239 YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 298

Query: 317 KVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGNTD 376
           + NC P+   +  LI      +K+++A+      +  G   +  TY  L+  +C     +
Sbjct: 299 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 358

Query: 377 RAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVI 436
            AY+ +D M  KG  P+  +Y  I+    + ++ +E  E+ + M    C P ++ Y  ++
Sbjct: 359 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMV 418

Query: 437 RLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGL 495
           R+ C    L  A+++W EM+  G+ PG+  +  ++     +  L EAC+YF +M++ G+
Sbjct: 419 RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470

[Close]

BLAST of CmaCh03G008870.1 vs. Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.8e-61
Identity = 135/414 (32.61%), Postives = 219/414 (52.90%), Query Frame = 1


Query: 83  DVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQP 142
           +VE+V +++ +       +E  L E  + L   L   VL R   A    +RFF WA+++ 
Sbjct: 130 EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQ 189

Query: 143 GYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKK 202
           G+ H+   Y +M+  L K RQF  + +++EEM  +   +LT E F + M+ FA+A+  KK
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG--LLTMETFTIAMKAFAAAKERKK 249

Query: 203 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYG 262
           AV + + M KY  +       CLLD+L +    KEA  LF+ ++ RF P +  +T LL G
Sbjct: 250 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 309

Query: 263 WCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMKKVNCGPN 322
           WCR   ++EA  +   + + G +PDIV +N +L G  ++ K  DA  L   MK     PN
Sbjct: 310 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 369

Query: 323 AASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGNTDRAYEILD 382
             SYTI+I+ FCK   M+ A+    +M   G + D   YT LI+GF      D  YE+L 
Sbjct: 370 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 429

Query: 383 NMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIR--LVCK 442
            M +KGH P   +Y  ++     ++  E    +  +M +    P ++ +N +++   V +
Sbjct: 430 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 489

Query: 443 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGL 495
             E+  AV  W EM   G+ P  ++Y V++ G +S+G   EAC Y ++M+++G+
Sbjct: 490 NYEMGRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539

[Close]

BLAST of CmaCh03G008870.1 vs. TrEMBL
Match: A0A0A0KPG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G011710 PE=4 SV=1)

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 579/648 (89.35%), Postives = 615/648 (94.91%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           MHRFY RTI +F+   S     KSNSPL F  +KPHLSLSL  ISS T+PN TT+ GGFG
Sbjct: 1   MHRFYHRTIHVFSKQSS-----KSNSPLIFLPKKPHLSLSL--ISSQTSPNGTTQRGGFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPH+S +DRDADEFS DVEKVYRILRKFHTRVPKLELALQESGV++RSGLPERV
Sbjct: 61  PIHLKTTPHESAHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           LSRCGDAGNLGYRFFVWASKQPGYRHSYEVY+AMIKTLGKMRQFGAVWALIEEMRKENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFAS RMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RFNP LRHFTSLLYGWCREGKI+EAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAFDLL +MKKVNCGPNAAS+TILIQ+FCK EKMDEAMRI  EMQG GCEADVVT
Sbjct: 301 AGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVT 360

Query: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCK GNTD+AYEILD+MIQKGHDPSQLSYLCIMMAHEKKE+LEECMEL+EEMR
Sbjct: 361 YTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGC+PDLNIYNT+IRLVCKLG+LKEAVRLWGEM+AGGLNPGLDTYI+MVHGFLSQGCL+
Sbjct: 421 KIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLV 480

Query: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFK+MVERGLLSAPQYGTLKELTNALLR +KLE+AKNMWSC+TTKG ELNVSAWTI
Sbjct: 481 EACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL++RQLAVEIT+KVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGVHKKTKSL 649
           ADR ITFKMYKRRGERDLKEKIKAK+DGRKRRAR+R W G+HKKTK+L
Sbjct: 601 ADRQITFKMYKRRGERDLKEKIKAKIDGRKRRARRRGWSGMHKKTKTL 641

[Close]

BLAST of CmaCh03G008870.1 vs. TrEMBL
Match: W9SJT5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012982 PE=4 SV=1)

HSP 1 Score: 983.4 bits (2541), Expect = 1.3e-283
Identity = 480/648 (74.07%), Postives = 549/648 (84.72%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           M R + R  SLF N   +L    S+ P T    KP+L    +  SS  NP+      GF 
Sbjct: 1   MQRAFYRARSLFTNRHFSL----SSQPNT----KPYLLSPQTQFSSTQNPH--NRATGFS 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           P+HL+  P  S +D   DEFS DVEK+YRILRKFH+RV KLELALQESGVVLRSGL ERV
Sbjct: 61  PVHLEQNPVVSDDDETHDEFSGDVEKIYRILRKFHSRVSKLELALQESGVVLRSGLTERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           L RCGDAG+LGYRFFVWASKQPGYR SYEVY+AMI+ LGKMRQFGAVWAL+EEMRKENP 
Sbjct: 121 LGRCGDAGSLGYRFFVWASKQPGYRPSYEVYKAMIRALGKMRQFGAVWALLEEMRKENPQ 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           ++TPE+F+VLMRRFASARMVKKAVEV DEMPKYGCEPDE+VFGCLLDALCKNGSVKEAAS
Sbjct: 181 LITPEIFVVLMRRFASARMVKKAVEVFDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFE+MR++F P+L+HFTSLLYGWCREGK++EAK VLVQ+KEAGFEPD+VVYNNLLGGYAQ
Sbjct: 241 LFEEMRVKFTPSLKHFTSLLYGWCREGKLMEAKFVLVQMKEAGFEPDVVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKM DA+DL+++M+   C PNAASYT+LIQA CK EKM+EAMR+ VEMQ  GC+ADV+T
Sbjct: 301 AGKMADAYDLMKEMRGKGCSPNAASYTVLIQALCKREKMEEAMRVFVEMQRSGCDADVMT 360

Query: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCK G  +R YEILD+MIQ+G  P++ +YL IM+AHEKKE+ EEC+EL+ EMR
Sbjct: 361 YTTLISGFCKWGKIERGYEILDSMIQRGFSPNETTYLHIMLAHEKKEEFEECVELIGEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGC+PDL IYNTVIRL CKL E+KE VRLW E+EA GL+PGLDT++VM+HGFL QGCLI
Sbjct: 421 KIGCVPDLKIYNTVIRLACKLREVKEGVRLWNEIEASGLSPGLDTFVVMIHGFLGQGCLI 480

Query: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EAC YFK+MVERGLLS PQYGTLKEL NALLR  KLE+AK++W+CI  KG E+NV AWTI
Sbjct: 481 EACQYFKEMVERGLLSGPQYGTLKELLNALLRADKLEMAKDVWTCIVNKGCEINVYAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALF NGHVKEACSYCLDMMDAD+MPQPDTFAKLMRGLKKLYNRQ+A EIT+KVRKMA
Sbjct: 541 WIHALFKNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGVHKKTKSL 649
            DR +TFKMYKRRGERDLKEK K K +GRKRRAR+RRWGG H   K+L
Sbjct: 601 EDRQMTFKMYKRRGERDLKEKAKEKQNGRKRRARRRRWGGRHGSAKAL 638

[Close]

BLAST of CmaCh03G008870.1 vs. TrEMBL
Match: F6I7J1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0525g00040 PE=4 SV=1)

HSP 1 Score: 968.4 bits (2502), Expect = 4.4e-279
Identity = 465/607 (76.61%), Postives = 533/607 (87.81%), Query Frame = 1


Query: 44  ISSHTNPNCTTET--GGFGPIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKL 103
           +S+  + NCT     GGFG + L++   + T D++ DEFSADVEKVYRILRKFH+RVPKL
Sbjct: 16  LSNFGDKNCTISERRGGFGLVRLESNRENCTYDQNYDEFSADVEKVYRILRKFHSRVPKL 75

Query: 104 ELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKM 163
           ELALQESGV +RSGL ERVL+RCGDAGNLGYRFFVWASKQPGYRHSYEVY+AMIK LGKM
Sbjct: 76  ELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKM 135

Query: 164 RQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYV 223
           RQFGAVWALIEEMR+ENP  ++P VF+VLMRRFASARMVKKA+EVLDEMPKYGCEPDE+V
Sbjct: 136 RQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHV 195

Query: 224 FGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKE 283
           FGCLLDALCKNGSVKEAASLFEDMRIRF PTL+HFTSLLYGWCREGK++EAK+VLVQI+E
Sbjct: 196 FGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIRE 255

Query: 284 AGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDE 343
           AGFEPDIVVYNNLL GYA AGKM DA+DLL++M++  C PN  S+T LIQA C  +KM+E
Sbjct: 256 AGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEE 315

Query: 344 AMRILVEMQGRGCEADVVTYTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMM 403
           AMR+  EMQ  GC AD VTYTTLISGFCK G   + YE+LDNMIQ+GH P+ ++YL IM 
Sbjct: 316 AMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMA 375

Query: 404 AHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNP 463
           AHEKKE+LEEC+ELMEEMRKIGC PDLNIYN VIRL CKLGE+KE VR+W EMEA GL+P
Sbjct: 376 AHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSP 435

Query: 464 GLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKN 523
           GLDT+++M+HGFLSQ CL+EAC++FK+MV RGLLSAPQYGTLKEL N+LLR +KLE++K+
Sbjct: 436 GLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKD 495

Query: 524 MWSCITTKGGELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLK 583
           +WSCI TKG +LNV AWTIWIHALFSNGHVKEACSYCLDMMDA +MPQPDTFAKLMRGL+
Sbjct: 496 VWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLR 555

Query: 584 KLYNRQLAVEITDKVRKMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGV 643
           KLYNRQ+A EIT+KVRKMAA+R +TFKMYKRRGER+LKEKIK   DGRKRRAR+RRWGG 
Sbjct: 556 KLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGERNLKEKIKEAKDGRKRRARRRRWGGG 615

Query: 644 HKKTKSL 649
           H +   L
Sbjct: 616 HGRANIL 622

[Close]

BLAST of CmaCh03G008870.1 vs. TrEMBL
Match: A5ANV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021787 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 1.8e-269
Identity = 448/575 (77.91%), Postives = 509/575 (88.52%), Query Frame = 1


Query: 74  DRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYR 133
           D D   + A  + VYRILRKFH+RVPKLELALQESGV +RSGL ERVL+RCGDAGNLGYR
Sbjct: 81  DLDLYAWKAIEKTVYRILRKFHSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYR 140

Query: 134 FFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 193
           FFVWASKQPGYRHSYEVY+AMIK LGKMRQFGAVWALIEEMR+ENP  ++P VF+VLMRR
Sbjct: 141 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRR 200

Query: 194 FASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTL 253
           FASARMVKKA+EVLDEMPKYGCEPDE+VFGCLLDALCKNGSVKEAASLFEDMRIRF PTL
Sbjct: 201 FASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTL 260

Query: 254 RHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQ 313
           +HFTSLLYGWCREGK++EAK+VLVQI+EAGFEPDIVVYNNLL GYA AGKM DA+DLL++
Sbjct: 261 KHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKE 320

Query: 314 MKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGN 373
           M++  C PN  S+T LIQA C  +KM+EAMR+  EMQ  GC AD VTYTTLISGFCK G 
Sbjct: 321 MRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK 380

Query: 374 TDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNT 433
             + YE+LDNMIQ+GH P+ ++YL IM AHEKKE+LEEC+ELMEEMRKIGC PDLNIYN 
Sbjct: 381 ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 440

Query: 434 VIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERG 493
           VIRL CKLGE+KE VR+W EMEA GL+PGLDT+++M+HGFLSQ CL+EAC++FK+MV RG
Sbjct: 441 VIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRG 500

Query: 494 LLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTIWIHALFSNGHVKE 553
           LLSAPQYGTLKEL N+LLR +KLE++K++WSCI TKG +LNV AWTIWIHALFSNGHVKE
Sbjct: 501 LLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKE 560

Query: 554 ACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMAADRNITFKMYKRR 613
           ACSYCLDMMDA +MPQPDTFAKLMRGL+KLYNRQ+A EIT+KVRKMAA+R +TFKMYKRR
Sbjct: 561 ACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMTFKMYKRR 620

Query: 614 GERDLKEKIKAKVDGRKRRARKRRWGGVHKKTKSL 649
           GER+LKEKIK   DGRKRRAR+RRWGG H +   L
Sbjct: 621 GERNLKEKIKEAKDGRKRRARRRRWGGGHGRANIL 655

[Close]

BLAST of CmaCh03G008870.1 vs. TrEMBL
Match: A0A072TSC5_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_8g071300 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 1.8e-269
Identity = 451/608 (74.18%), Postives = 533/608 (87.66%), Query Frame = 1


Query: 45  SSHTNP--NCT----TETGGFGPIHLKT-TPHDSTNDRDADEFSADVEKVYRILRKFHTR 104
           SSH++P  N T    ++   FG IHL++ T H   ND++ DEF++DVEK+YRILRK+H+R
Sbjct: 40  SSHSSPPPNPTKPSKSQNDQFGLIHLRSNTIH--FNDQNNDEFASDVEKIYRILRKYHSR 99

Query: 105 VPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKT 164
           VPKLELAL+ESGVV+RSGL ERVL+RCGDAGNL YRFF WASKQ  YRHS EVY+AMIK 
Sbjct: 100 VPKLELALKESGVVVRSGLTERVLNRCGDAGNLAYRFFSWASKQTSYRHSQEVYKAMIKV 159

Query: 165 LGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEP 224
           L KMRQFGAVW LI+EMR EN  +++P+VF++LMRRFASARMV KA+EVLDEMPKYGCE 
Sbjct: 160 LSKMRQFGAVWGLIDEMRVENSELISPQVFVILMRRFASARMVSKAIEVLDEMPKYGCEV 219

Query: 225 DEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLV 284
           DEYVFGCLLDALCKNGSVKEAASLFEDMR +F PT++HFTSLLYGWC+EGK++EAKHVLV
Sbjct: 220 DEYVFGCLLDALCKNGSVKEAASLFEDMRYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLV 279

Query: 285 QIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKME 344
           Q+K+AG EPDIVV+NNLLGGYAQAGKM DA+DLL++M++  C PNAASYT+LIQ+ CK E
Sbjct: 280 QMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHE 339

Query: 345 KMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYL 404
           K++EAMR+ VEMQ  GC+ DV+TYTTLISGFCK G   R YE+LD M Q+GH P+QL+Y+
Sbjct: 340 KLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYM 399

Query: 405 CIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAG 464
            IM+AHEKKE+LEECMEL+ EM+KIGC+PDLNIYN VIRL CKLGE+K+ VRLW EMEA 
Sbjct: 400 HIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNIVIRLACKLGEVKQGVRLWNEMEAS 459

Query: 465 GLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLE 524
           GLNPG+DT+++M++GFL Q CL+EAC++FK+MV RGL +APQYGTLKEL N+LLR +KLE
Sbjct: 460 GLNPGIDTFVIMINGFLEQECLVEACEFFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLE 519

Query: 525 LAKNMWSCIT-TKGGELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKL 584
           +AK+ WSCIT +KG E+NV AWTIWIHALFS GHVKEACS+C+DMMD DLMPQPDTFAKL
Sbjct: 520 MAKDTWSCITSSKGCEMNVGAWTIWIHALFSKGHVKEACSFCIDMMDNDLMPQPDTFAKL 579

Query: 585 MRGLKKLYNRQLAVEITDKVRKMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKR 644
           MRGLKKLYNR+ AVEITDKVRKMAADRNITFKMYKRRGERDLKEK+K K DGRKRRAR+R
Sbjct: 580 MRGLKKLYNREFAVEITDKVRKMAADRNITFKMYKRRGERDLKEKVKEKKDGRKRRARQR 639

[Close]

BLAST of CmaCh03G008870.1 vs. TAIR10
Match: AT3G49730.1 (AT3G49730.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 816.6 bits (2108), Expect = 1.1e-236
Identity = 409/652 (62.73%), Postives = 506/652 (77.61%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           M RF      L +  PS+    ++NS +    ++ H+S  L+    +     T    G G
Sbjct: 1   MRRFSTIVDLLISKKPSS----QANSRIDLICKRFHISRVLN----NDFVESTERKNGVG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
            +           ++  DEF+ +VEK+YRILR  H+RVPKLELAL ESG+ LR GL  RV
Sbjct: 61  LV---------CPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           LSRCGDAGNLGYRFF+WA+KQPGY HSYEV ++M+  L KMRQFGAVW LIEEMRK NP 
Sbjct: 121 LSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPE 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           ++ PE+F+VLMRRFASA MVKKAVEVLDEMPKYG EPDEYVFGCLLDALCKNGSVKEA+ 
Sbjct: 181 LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           +FEDMR +F P LR+FTSLLYGWCREGK++EAK VLVQ+KEAG EPDIVV+ NLL GYA 
Sbjct: 241 VFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 300

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEK-MDEAMRILVEMQGRGCEADVV 360
           AGKM DA+DL+  M+K    PN   YT+LIQA C+ EK MDEAMR+ VEM+  GCEAD+V
Sbjct: 301 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 360

Query: 361 TYTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEM 420
           TYT LISGFCK G  D+ Y +LD+M +KG  PSQ++Y+ IM+AHEKKEQ EEC+EL+E+M
Sbjct: 361 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 420

Query: 421 RKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCL 480
           ++ GC PDL IYN VIRL CKLGE+KEAVRLW EMEA GL+PG+DT+++M++GF SQG L
Sbjct: 421 KRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFL 480

Query: 481 IEACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGG--ELNVSA 540
           IEAC++FK+MV RG+ SAPQYGTLK L N L+RD KLE+AK++WSCI+ K    ELNVSA
Sbjct: 481 IEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSA 540

Query: 541 WTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVR 600
           WTIWIHAL++ GHVKEACSYCLDMM+ DLMPQP+T+AKLM+GL KLYNR +A EIT+KV 
Sbjct: 541 WTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVV 600

Query: 601 KMAADRNITFKMYKRRGERDLKEKIKAK--VDGRKRRARKRRWGGVHKKTKS 648
           KMA++R ++FKMYK++GE DL EK K K   +G+K+    +R+ G  +++++
Sbjct: 601 KMASEREMSFKMYKKKGEEDLIEKAKPKGNKEGKKKGTDHQRYKGRGERSRA 635

[Close]

BLAST of CmaCh03G008870.1 vs. TAIR10
Match: AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 816.6 bits (2108), Expect = 1.1e-236
Identity = 405/638 (63.48%), Postives = 500/638 (78.37%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           MHRF      L +     L  ++  S      R  H+S +L      +N        G G
Sbjct: 8   MHRFSPIVEFLLSKRQIFLHYSQFKSRFDLIHRSFHVSRALEDNFRRSN--------GIG 67

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
            + L+ + +D T +   DEF++DVEK YRILRKFH+RVPKLELAL ESGV LR GL ERV
Sbjct: 68  LVCLEKSHNDRTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERV 127

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           L+RCGDAGNLGYRFFVWA+KQP Y HS EVY++M+K L KMRQFGAVW LIEEMRKENP 
Sbjct: 128 LNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQ 187

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           ++ PE+F+VL++RFASA MVKKA+EVLDEMPK+G EPDEYVFGCLLDALCK+GSVK+AA 
Sbjct: 188 LIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK 247

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RF   LR+FTSLLYGWCR GK++EAK+VLVQ+ EAGFEPDIV Y NLL GYA 
Sbjct: 248 LFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYAN 307

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKM DA+DLL  M++    PNA  YT+LIQA CK+++M+EAM++ VEM+   CEADVVT
Sbjct: 308 AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVT 367

Query: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YT L+SGFCK G  D+ Y +LD+MI+KG  PS+L+Y+ IM+AHEKKE  EEC+ELME+MR
Sbjct: 368 YTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMR 427

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           +I   PD+ IYN VIRL CKLGE+KEAVRLW EME  GL+PG+DT+++M++G  SQGCL+
Sbjct: 428 QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 487

Query: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGG-ELNVSAWT 540
           EA D+FK+MV RGL S  QYGTLK L N +L+D+KLE+AK++WSCIT+KG  ELNV +WT
Sbjct: 488 EASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWT 547

Query: 541 IWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKM 600
           IWIHALFS G+ KEACSYC++M++ D MPQPDTFAKLM+GLKKLYNR+ A EIT+KVR M
Sbjct: 548 IWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNM 607

Query: 601 AADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRR 638
           AA+R ++FKMYKRRG +DL EK K+K D   ++ ++ R
Sbjct: 608 AAEREMSFKMYKRRGVQDLTEKAKSKQDREGKKKQRSR 637

[Close]

BLAST of CmaCh03G008870.1 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 261.2 bits (666), Expect = 1.7e-69
Identity = 143/441 (32.43%), Postives = 247/441 (56.01%), Query Frame = 1


Query: 83  DVEKVYRILRKFHTRVPKLEL--ALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASK 142
           DV  V + + K     P+L L  AL +SG+ +   + E VL+R  +AG L YRFF W+ K
Sbjct: 67  DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 126

Query: 143 QPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMV 202
           Q  Y HS   Y  MI++  K+RQ+  +W LI  MRK+   ML  E F ++MR++A A+ V
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKV 186

Query: 203 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLL 262
            +A+   + M KY   P+   F  LL ALCK+ +V++A  +FE+MR RF P  + ++ LL
Sbjct: 187 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILL 246

Query: 263 YGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMKKVNCG 322
            GW +E  + +A+ V  ++ +AG  PDIV Y+ ++    +AG++ +A  ++  M    C 
Sbjct: 247 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 306

Query: 323 PNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGNTDRAYEI 382
           P    Y++L+  +    +++EA+   +EM+  G +ADV  + +LI  FCK       Y +
Sbjct: 307 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 366

Query: 383 LDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCK 442
           L  M  KG  P+  S   I+    ++ + +E  ++  +M K+ C PD + Y  VI++ C+
Sbjct: 367 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCE 426

Query: 443 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLL-SAPQ 502
             E++ A ++W  M   G+ P + T+ V+++G   +    +AC   ++M+E G+  S   
Sbjct: 427 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 486

Query: 503 YGTLKELTNALLRDQKLELAK 521
           +G L++L   L+++++ ++ K
Sbjct: 487 FGRLRQL---LIKEEREDVLK 501

[Close]

BLAST of CmaCh03G008870.1 vs. TAIR10
Match: AT1G71060.1 (AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 248.1 bits (632), Expect = 1.5e-65
Identity = 128/419 (30.55%), Postives = 231/419 (55.13%), Query Frame = 1


Query: 77  ADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFV 136
           A++ S D E++ +IL KF     K+E  L E+ V L   L E VL +  +AG L    F 
Sbjct: 59  ANDASQDAERICKILTKFTDS--KVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFK 118

Query: 137 WASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFAS 196
           WA  Q G++H+   Y A+I++LGK++QF  +W+L+++M+ +   +L+ E F ++ RR+A 
Sbjct: 119 WAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK--LLSKETFALISRRYAR 178

Query: 197 ARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RIRFNPTLRH 256
           AR VK+A+    +M ++G + +   F  +LD L K+ +V +A  +F+ M + RF P ++ 
Sbjct: 179 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 238

Query: 257 FTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMK 316
           +T LL GW +E  +L    V  ++K+ GFEPD+V Y  ++  + +A K  +A     +M+
Sbjct: 239 YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 298

Query: 317 KVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGNTD 376
           + NC P+   +  LI      +K+++A+      +  G   +  TY  L+  +C     +
Sbjct: 299 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 358

Query: 377 RAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVI 436
            AY+ +D M  KG  P+  +Y  I+    + ++ +E  E+ + M    C P ++ Y  ++
Sbjct: 359 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMV 418

Query: 437 RLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGL 495
           R+ C    L  A+++W EM+  G+ PG+  +  ++     +  L EAC+YF +M++ G+
Sbjct: 419 RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470

[Close]

BLAST of CmaCh03G008870.1 vs. TAIR10
Match: AT3G62540.1 (AT3G62540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-62
Identity = 135/414 (32.61%), Postives = 219/414 (52.90%), Query Frame = 1


Query: 83  DVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQP 142
           +VE+V +++ +       +E  L E  + L   L   VL R   A    +RFF WA+++ 
Sbjct: 130 EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQ 189

Query: 143 GYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKK 202
           G+ H+   Y +M+  L K RQF  + +++EEM  +   +LT E F + M+ FA+A+  KK
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG--LLTMETFTIAMKAFAAAKERKK 249

Query: 203 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYG 262
           AV + + M KY  +       CLLD+L +    KEA  LF+ ++ RF P +  +T LL G
Sbjct: 250 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 309

Query: 263 WCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMKKVNCGPN 322
           WCR   ++EA  +   + + G +PDIV +N +L G  ++ K  DA  L   MK     PN
Sbjct: 310 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 369

Query: 323 AASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKCGNTDRAYEILD 382
             SYTI+I+ FCK   M+ A+    +M   G + D   YT LI+GF      D  YE+L 
Sbjct: 370 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 429

Query: 383 NMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIR--LVCK 442
            M +KGH P   +Y  ++     ++  E    +  +M +    P ++ +N +++   V +
Sbjct: 430 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 489

Query: 443 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGL 495
             E+  AV  W EM   G+ P  ++Y V++ G +S+G   EAC Y ++M+++G+
Sbjct: 490 NYEMGRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539

[Close]

BLAST of CmaCh03G008870.1 vs. NCBI nr
Match: gi|449463822|ref|XP_004149630.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like [Cucumis sativus])

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 579/648 (89.35%), Postives = 615/648 (94.91%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           MHRFY RTI +F+   S     KSNSPL F  +KPHLSLSL  ISS T+PN TT+ GGFG
Sbjct: 1   MHRFYHRTIHVFSKQSS-----KSNSPLIFLPKKPHLSLSL--ISSQTSPNGTTQRGGFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPH+S +DRDADEFS DVEKVYRILRKFHTRVPKLELALQESGV++RSGLPERV
Sbjct: 61  PIHLKTTPHESAHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           LSRCGDAGNLGYRFFVWASKQPGYRHSYEVY+AMIKTLGKMRQFGAVWALIEEMRKENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFAS RMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RFNP LRHFTSLLYGWCREGKI+EAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAFDLL +MKKVNCGPNAAS+TILIQ+FCK EKMDEAMRI  EMQG GCEADVVT
Sbjct: 301 AGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVT 360

Query: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCK GNTD+AYEILD+MIQKGHDPSQLSYLCIMMAHEKKE+LEECMEL+EEMR
Sbjct: 361 YTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGC+PDLNIYNT+IRLVCKLG+LKEAVRLWGEM+AGGLNPGLDTYI+MVHGFLSQGCL+
Sbjct: 421 KIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLV 480

Query: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFK+MVERGLLSAPQYGTLKELTNALLR +KLE+AKNMWSC+TTKG ELNVSAWTI
Sbjct: 481 EACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL++RQLAVEIT+KVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGVHKKTKSL 649
           ADR ITFKMYKRRGERDLKEKIKAK+DGRKRRAR+R W G+HKKTK+L
Sbjct: 601 ADRQITFKMYKRRGERDLKEKIKAKIDGRKRRARRRGWSGMHKKTKTL 641

[Close]

BLAST of CmaCh03G008870.1 vs. NCBI nr
Match: gi|659130244|ref|XP_008465066.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like [Cucumis melo])

HSP 1 Score: 1186.8 bits (3069), Expect = 0.0e+00
Identity = 582/648 (89.81%), Postives = 614/648 (94.75%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           MHRFY RTI +F+   S     KSNSPL F  +KPHLSLSL  ISS T+PN T + G FG
Sbjct: 1   MHRFYHRTIHVFSKQSS-----KSNSPLIFLPKKPHLSLSL--ISSQTSPNGTPQRGWFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPH+ST+D DADEFS DVEKVYRILRKFHTRVPKLELALQESGV+LRSGLPERV
Sbjct: 61  PIHLKTTPHESTHDIDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVILRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           LSRCGDAGNLGYRFFVWASKQPGY+HSYEVY+AMIKTLGKMRQFGAVWALIEEMRKENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYKHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RFNP+LRHFTSLLYGWCREGKI+EAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRVRFNPSLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAFDLL +MKKVNCGPNAAS+TILIQAFCKMEKMDEAMRI  EMQG GCEADVVT
Sbjct: 301 AGKMRDAFDLLAEMKKVNCGPNAASFTILIQAFCKMEKMDEAMRIFTEMQGSGCEADVVT 360

Query: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCK GNTDRAYEILD+MIQKGHDPSQ SYLCIMMAHEKKE+LEECMEL+EEMR
Sbjct: 361 YTTLISGFCKWGNTDRAYEILDDMIQKGHDPSQSSYLCIMMAHEKKEELEECMELIEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGCLPDLNIYNT+IRLVCKLG+LKEAVRLWGEMEAGGLNPGLDTYI+MVHGFLSQGCL+
Sbjct: 421 KIGCLPDLNIYNTMIRLVCKLGDLKEAVRLWGEMEAGGLNPGLDTYILMVHGFLSQGCLV 480

Query: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFK+MVERGLLSAPQYGTLKELTNALLR +KLE+AKNMWSCITTKG ELNV+AWTI
Sbjct: 481 EACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCITTKGCELNVNAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL++RQLAVEIT+KVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGVHKKTKSL 649
           ADR ITFKMYKRRGERDLKEK KAK+DGRKRRAR+R W GVHKKTK+L
Sbjct: 601 ADRQITFKMYKRRGERDLKEKTKAKIDGRKRRARRRHWSGVHKKTKTL 641

[Close]

BLAST of CmaCh03G008870.1 vs. NCBI nr
Match: gi|1009181918|ref|XP_015872431.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Ziziphus jujuba])

HSP 1 Score: 985.7 bits (2547), Expect = 3.8e-284
Identity = 469/591 (79.36%), Postives = 534/591 (90.36%), Query Frame = 1


Query: 58  GFGPIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLP 117
           GFG + L+T+P    +D+  DEFS+DVEK+Y IL++FH+RVPKLELALQESGVVLRSGL 
Sbjct: 63  GFGLLRLETSPVIRMDDQSCDEFSSDVEKIYGILKRFHSRVPKLELALQESGVVLRSGLT 122

Query: 118 ERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKE 177
           ERVL+RCGDAG+LGYRFFVWASKQPGYR SYEVY+AMI+ LGKMRQFGAVWAL+EEMRKE
Sbjct: 123 ERVLNRCGDAGSLGYRFFVWASKQPGYRPSYEVYKAMIRVLGKMRQFGAVWALLEEMRKE 182

Query: 178 NPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKE 237
           NP ++TP+VF+VLMRRFASARMVKK++EVLDEMPKYGCEPDEY FGCLLDALCKNGSVK+
Sbjct: 183 NPQLITPDVFVVLMRRFASARMVKKSIEVLDEMPKYGCEPDEYAFGCLLDALCKNGSVKD 242

Query: 238 AASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGG 297
           AASLFEDMRIRF P+L+HFTSLLYGWCREGK++EAK VLVQ+KEAGFEPDIVVYNNLLGG
Sbjct: 243 AASLFEDMRIRFRPSLKHFTSLLYGWCREGKLMEAKFVLVQMKEAGFEPDIVVYNNLLGG 302

Query: 298 YAQAGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEAD 357
           YAQAGKM DA+ LL++MK+  C PNA SYTILIQA C  EKM+EAMR+ VEMQ  G EAD
Sbjct: 303 YAQAGKMADAYGLLKEMKEKGCIPNATSYTILIQALCGREKMEEAMRVFVEMQRSGSEAD 362

Query: 358 VVTYTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELME 417
           +VTYTTLISGFCK G  ++ YEILD+MIQ+GH+P+Q+ YL IMMAHEKKE+LEEC+ELME
Sbjct: 363 IVTYTTLISGFCKWGKIEKGYEILDSMIQRGHNPNQMVYLHIMMAHEKKEELEECLELME 422

Query: 418 EMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQG 477
           EMRKIGC+P+LNIYNTVIRL CKLGE+KE VR+W EMEA GL+PGLDT+++M+HGFL QG
Sbjct: 423 EMRKIGCIPELNIYNTVIRLACKLGEVKEGVRVWNEMEATGLSPGLDTFVIMIHGFLEQG 482

Query: 478 CLIEACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSA 537
           CL++ACDYFK+MV RGLLSAPQYGTLKEL N LLR +KLE+AK++WSCI TKG ELNVSA
Sbjct: 483 CLVDACDYFKEMVGRGLLSAPQYGTLKELMNTLLRAEKLEMAKDVWSCIVTKGCELNVSA 542

Query: 538 WTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVR 597
           WTIWIHALFS GHVKEACSYCLDMMD DLMPQPDTFAKLMRGLKKLYNRQ+A EIT+KVR
Sbjct: 543 WTIWIHALFSKGHVKEACSYCLDMMDLDLMPQPDTFAKLMRGLKKLYNRQIAAEITEKVR 602

Query: 598 KMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGVHKKTKSL 649
           KMAADR ITFKMYKRRGERDLKE++K K DGRKRRAR+RRWGG   + K L
Sbjct: 603 KMAADRQITFKMYKRRGERDLKEQVKEKKDGRKRRARRRRWGGKTDRAKLL 653

[Close]

BLAST of CmaCh03G008870.1 vs. NCBI nr
Match: gi|703139063|ref|XP_010106889.1| (hypothetical protein L484_012982 [Morus notabilis])

HSP 1 Score: 983.4 bits (2541), Expect = 1.9e-283
Identity = 480/648 (74.07%), Postives = 549/648 (84.72%), Query Frame = 1


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60
           M R + R  SLF N   +L    S+ P T    KP+L    +  SS  NP+      GF 
Sbjct: 1   MQRAFYRARSLFTNRHFSL----SSQPNT----KPYLLSPQTQFSSTQNPH--NRATGFS 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           P+HL+  P  S +D   DEFS DVEK+YRILRKFH+RV KLELALQESGVVLRSGL ERV
Sbjct: 61  PVHLEQNPVVSDDDETHDEFSGDVEKIYRILRKFHSRVSKLELALQESGVVLRSGLTERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180
           L RCGDAG+LGYRFFVWASKQPGYR SYEVY+AMI+ LGKMRQFGAVWAL+EEMRKENP 
Sbjct: 121 LGRCGDAGSLGYRFFVWASKQPGYRPSYEVYKAMIRALGKMRQFGAVWALLEEMRKENPQ 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           ++TPE+F+VLMRRFASARMVKKAVEV DEMPKYGCEPDE+VFGCLLDALCKNGSVKEAAS
Sbjct: 181 LITPEIFVVLMRRFASARMVKKAVEVFDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFE+MR++F P+L+HFTSLLYGWCREGK++EAK VLVQ+KEAGFEPD+VVYNNLLGGYAQ
Sbjct: 241 LFEEMRVKFTPSLKHFTSLLYGWCREGKLMEAKFVLVQMKEAGFEPDVVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKM DA+DL+++M+   C PNAASYT+LIQA CK EKM+EAMR+ VEMQ  GC+ADV+T
Sbjct: 301 AGKMADAYDLMKEMRGKGCSPNAASYTVLIQALCKREKMEEAMRVFVEMQRSGCDADVMT 360

Query: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCK G  +R YEILD+MIQ+G  P++ +YL IM+AHEKKE+ EEC+EL+ EMR
Sbjct: 361 YTTLISGFCKWGKIERGYEILDSMIQRGFSPNETTYLHIMLAHEKKEEFEECVELIGEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGC+PDL IYNTVIRL CKL E+KE VRLW E+EA GL+PGLDT++VM+HGFL QGCLI
Sbjct: 421 KIGCVPDLKIYNTVIRLACKLREVKEGVRLWNEIEASGLSPGLDTFVVMIHGFLGQGCLI 480

Query: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EAC YFK+MVERGLLS PQYGTLKEL NALLR  KLE+AK++W+CI  KG E+NV AWTI
Sbjct: 481 EACQYFKEMVERGLLSGPQYGTLKELLNALLRADKLEMAKDVWTCIVNKGCEINVYAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALF NGHVKEACSYCLDMMDAD+MPQPDTFAKLMRGLKKLYNRQ+A EIT+KVRKMA
Sbjct: 541 WIHALFKNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGVHKKTKSL 649
            DR +TFKMYKRRGERDLKEK K K +GRKRRAR+RRWGG H   K+L
Sbjct: 601 EDRQMTFKMYKRRGERDLKEKAKEKQNGRKRRARRRRWGGRHGSAKAL 638

[Close]

BLAST of CmaCh03G008870.1 vs. NCBI nr
Match: gi|731441047|ref|XP_003635394.2| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Vitis vinifera])

HSP 1 Score: 968.4 bits (2502), Expect = 6.3e-279
Identity = 465/607 (76.61%), Postives = 533/607 (87.81%), Query Frame = 1


Query: 44  ISSHTNPNCTTET--GGFGPIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKL 103
           +S+  + NCT     GGFG + L++   + T D++ DEFSADVEKVYRILRKFH+RVPKL
Sbjct: 69  LSNFGDKNCTISERRGGFGLVRLESNRENCTYDQNYDEFSADVEKVYRILRKFHSRVPKL 128

Query: 104 ELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKM 163
           ELALQESGV +RSGL ERVL+RCGDAGNLGYRFFVWASKQPGYRHSYEVY+AMIK LGKM
Sbjct: 129 ELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKM 188

Query: 164 RQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYV 223
           RQFGAVWALIEEMR+ENP  ++P VF+VLMRRFASARMVKKA+EVLDEMPKYGCEPDE+V
Sbjct: 189 RQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHV 248

Query: 224 FGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKE 283
           FGCLLDALCKNGSVKEAASLFEDMRIRF PTL+HFTSLLYGWCREGK++EAK+VLVQI+E
Sbjct: 249 FGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIRE 308

Query: 284 AGFEPDIVVYNNLLGGYAQAGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDE 343
           AGFEPDIVVYNNLL GYA AGKM DA+DLL++M++  C PN  S+T LIQA C  +KM+E
Sbjct: 309 AGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEE 368

Query: 344 AMRILVEMQGRGCEADVVTYTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMM 403
           AMR+  EMQ  GC AD VTYTTLISGFCK G   + YE+LDNMIQ+GH P+ ++YL IM 
Sbjct: 369 AMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMA 428

Query: 404 AHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNP 463
           AHEKKE+LEEC+ELMEEMRKIGC PDLNIYN VIRL CKLGE+KE VR+W EMEA GL+P
Sbjct: 429 AHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSP 488

Query: 464 GLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKN 523
           GLDT+++M+HGFLSQ CL+EAC++FK+MV RGLLSAPQYGTLKEL N+LLR +KLE++K+
Sbjct: 489 GLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKD 548

Query: 524 MWSCITTKGGELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLK 583
           +WSCI TKG +LNV AWTIWIHALFSNGHVKEACSYCLDMMDA +MPQPDTFAKLMRGL+
Sbjct: 549 VWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLR 608

Query: 584 KLYNRQLAVEITDKVRKMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRARKRRWGGV 643
           KLYNRQ+A EIT+KVRKMAA+R +TFKMYKRRGER+LKEKIK   DGRKRRAR+RRWGG 
Sbjct: 609 KLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGERNLKEKIKEAKDGRKRRARRRRWGGG 668

Query: 644 HKKTKSL 649
           H +   L
Sbjct: 669 HGRANIL 675

The following BLAST results are available for this feature:

BLAST of CmaCh03G008870.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP275_ARATH	1.9e-235	62.73	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN...	[more]
PP447_ARATH	1.9e-235	63.48	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
PP129_ARATH	3.1e-68	32.43	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]
PP112_ARATH	2.7e-64	30.55	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
PP294_ARATH	2.8e-61	32.61	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]

BLAST of CmaCh03G008870.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPG0_CUCSA	0.0e+00	89.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G011710 PE=4 SV=1	[more]
W9SJT5_9ROSA	1.3e-283	74.07	Uncharacterized protein OS=Morus notabilis GN=L484_012982 PE=4 SV=1	[more]
F6I7J1_VITVI	4.4e-279	76.61	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0525g00040 PE=4 SV=...	[more]
A5ANV6_VITVI	1.8e-269	77.91	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021787 PE=4 SV=1	[more]
A0A072TSC5_MEDTR	1.8e-269	74.18	PPR containing plant-like protein OS=Medicago truncatula GN=MTR_8g071300 PE=4 SV...	[more]

BLAST of CmaCh03G008870.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49730.1	1.1e-236	62.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65820.1	1.1e-236	63.48	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G77360.1	1.7e-69	32.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G71060.1	1.5e-65	30.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G62540.1	1.6e-62	32.61	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CmaCh03G008870.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463822\|ref\|XP_004149630.1\|	0.0e+00	89.35	PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like [Cucumis s...	[more]
gi\|659130244\|ref\|XP_008465066.1\|	0.0e+00	89.81	PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like [Cucumis m...	[more]
gi\|1009181918\|ref\|XP_015872431.1\|	3.8e-284	79.36	PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Zizip...	[more]
gi\|703139063\|ref\|XP_010106889.1\|	1.9e-283	74.07	hypothetical protein L484_012982 [Morus notabilis]	[more]
gi\|731441047\|ref\|XP_003635394.2\|	6.3e-279	76.61	PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Vitis...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G008870	CmaCh03G008870	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G008870.1	CmaCh03G008870.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G008870.1.CDS.1	CmaCh03G008870.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G008870.1.exon.1	CmaCh03G008870.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 150..178 score: 0.79coord: 537..563 score: 0.035coord: 255..284 score: 0.028coord: 395..424 score: 0
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 214..246 score: 6.1E-10coord: 352..384 score: 1.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 426..473 score: 6.1E-10coord: 286..335 score: 1.3
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 187..219 score: 8.9E-7coord: 465..494 score: 8.7E-5coord: 537..568 score: 6.5E-4coord: 289..323 score: 7.1E-8coord: 325..358 score: 3.0E-8coord: 430..461 score: 2.9E-6coord: 359..392 score: 3.8E-9coord: 150..177 score: 0.0028coord: 256..288 score: 3.7E-5coord: 220..246 score: 9.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 427..461 score: 11.915coord: 252..286 score: 10.03coord: 462..496 score: 8.824coord: 534..568 score: 8.429coord: 147..181 score: 7.541coord: 392..426 score: 9.273coord: 357..391 score: 13.932coord: 183..217 score: 10.15coord: 322..356 score: 12.047coord: 287..321 score: 12.386coord: 218..248 score: 9
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 290..601 score: 3.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 227..451 score: 7.9
None	No IPR available	unknown	Coil	Coil	coord: 402..422 scor
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 91..610 score:
None	No IPR available	PANTHER	PTHR24015:SF710	SUBFAMILY NOT NAMED	coord: 91..610 score: