CmaCh03G001600.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh03G001600.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr03 : 2177965 .. 2180525 (-)
Sequence length456
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCGTGTGAGTGACGACGTGTGAGAAGGTGTGTGTGTAAGTGTGTAAATATGATCTGATTAAGGAACTTGATGTTGATGCAGTTTTCAGGTCAAAGTCCACAGAGGTGGCAGGCCTTGAGAAACATGCATGTTTTCCCACTGTTTTGTGTATTATCATCTTATCATCTCATTTTCTCCATAAAAGGCAAGTACATGGAGAAAAAAAAAGAAAAAAGAGCAATATATTGGCCATGATTTAATCTCGATCTTAAAATCTCCACCATATACGAAGGACTGGTCGGTTAGTGGCCATGTTTAATCCCGATCGCTTCAAATCTCCCCAATATACATTATTTATTCCTGATTCCTTTAAATCTCTACAGAGGTGTACATGGTCTGGGTTGGGTCGGGTTGAAGGATTTTTTTTGACCGGGTTGGTTGGATTGGTAACTCAACCCGAAACTTTTCACGACCCAAAATCTCTAATGGATTGTCAAATTTTTTTTATAGTTTTATTTATCCATGATTTATAATAAAATATATTAAAAGTTCACCATAAAACTATAATCAATTTATAATAAAATAATAAAGTAAAAAAAACGAGCGAAAATTGTAATTCAATATTATCATAAAATTAAAGATAATTAAATATCGACATTTTTTTAGAATTGGTTAGTTAATTAAAATATATTTATTTATACATTACCTTAAATTATTAGAAATATAGAAAAAGAAAAAAATATATATATATAAATTGTGATATAATAATATTGTAACAAATAGATAATAAATATATTATAATTTAAATTATGTTTTAAAATTATATATATATATAAAAAATTTATGAACATGAATTCAAATAACTTAAAACATAAATATATTTTTATATATGTATATATATATGAAAAAAACTAAAAAAAAAAATTAAAAATAACAAAATAAAAAAATAATACAAACAAAACAATAAAATTAAAAATAATAAAATAAACAACGTGGATCCAAATAATTTTCATATATGTATAAATTATAATTAATATATATACATATATGAAAGAAACTAAAAATAACAAAATAAAAAACAACCCATTATTACAAAAATATTCTTAATATATTTTATATCTCGAAAGTTTTACCCACGAATTCGAAACTGAACCAATTTAGTTCAGGTTCAAAAAAATGAACTCAACCCTACCCGAAATGTTAATCCAACCCATCACAACCCTTATAGTTCGGGTTGTCGGGTTGAATGTACACTCCTAATCTCTACAATATACCAACTATTATTTAAATTTATTCCCGATCCCTTAAAGTTCAAAAATAATTAATTTAGGTTGATAGTAAGCTTGTTCCCAAATCAGGTTAACTATAGAATCTCCATGATATCTGATTAGATAAATGTTCGGTTTTTAAATGCAAAGTCCTAACTTTTAGGTACTTTTATTTAAGATGGGAAAGCAAGTTTCACGTGAAAGTGAGCACACAAAGTTTGGAGCCAATTTTAGGGTTTGACTTCGTCATGAAAATTGTGGGAACAGGTGGATTTCAATTAATGATATTTATATACTTCCCATTTTCTTTTTAATTTATTTTAATTTTAAATTTTAATTTTGGAGTCCGACCATAATTAACCATTATATAAATTTAATCTTATAATAAATAAATTTATTTTGCACCTTTTGGTTTTTATGTAGTTTAAAAAGATTTATTTTATTTTATTTTTTATTGATTCGGTTGGATGATGAAAGTCGGATTTAGGGAATGATCATGGATTTAAGTGAGGAATACTAACTCCATTGGTATGAGGTCTTTTGTAAAGCCCAAAGCAAAGCCATGAAAGCTTATACTCAAAGCGGACAATATCATAACATTATGGAGAGTCGTGTTCGTCTAACGTGGTATCAGAGCCATGCCATAAACTTAGCCGTGACGTGCTTTGTTCGAGGAGAGGTGAAAGTCCCACATCGGCTAAATTATTGTTTTTTTTGTAACTAATATTAATGATTGGTTACGAGGTCTGAATTTTTTATATTTGGCTCACTAGACACACCAATAAAGAGTTGTGTTTGGGTTTGAATTCTATTTGAATCGATCTAATCCAGAGTTGATAGTTGGATTCAAAAGATTTTTTTGATAAATTAAGAAGGATTTAGGAATGATTGCAATTGATTTTAAATGTATAGAGGTATTTTTAATAACTTATTACAAATTTGATCATGTGGTTTTAGATATTGATTTAGTTCTCGTCCCACATGGGTTGGAAGATTTTCCGGGAAAATTTCGAGGGAAAGTTTTGGCAGAGCGTCCAAATGGATTTGTGTAACAAGAACAGAAAGATTTCAATTCCTATCAGTTTTCACTTTTCATCTAAAGGCCAAACAACAACTGGTTCGAATCTCTCTCTCTCTACTACAGGACATTCACCAGAAAAAATATCAAGCAATCCCATCAATCCTTCTCTCTTACTTTCTATCTTCACCAACGTGGTGATTACCGATTTCCACTCCGCTCATATATTCTACACCAGAAAGCCAGATTCCCACCGAACGGAGCTGCCTCTTGGATTTCCTTCTTCCTGA

mRNA sequence

ATGAACGCGTTTTTCAGGTCAAAGTCCACAGAGGTGGCAGGCCTTGAGAAACATGCATGTTTTCCCACTGTTTTGTGTATTATCATCTTATCATCTCATTTTCTCCATAAAAGGCAATTCTCGTCCCACATGGGTTGGAAGATTTTCCGGGAAAATTTCGAGGGAAAGTTTTGGCAGAGCGTCCAAATGGATTTGTGTAACAAGAACAGAAAGATTTCAATTCCTATCAGTTTTCACTTTTCATCTAAAGGCCAAACAACAACTGGTTCGAATCTCTCTCTCTCTACTACAGGACATTCACCAGAAAAAATATCAAGCAATCCCATCAATCCTTCTCTCTTACTTTCTATCTTCACCAACGTGGTGATTACCGATTTCCACTCCGCTCATATATTCTACACCAGAAAGCCAGATTCCCACCGAACGGAGCTGCCTCTTGGATTTCCTTCTTCCTGA

Coding sequence (CDS)

ATGAACGCGTTTTTCAGGTCAAAGTCCACAGAGGTGGCAGGCCTTGAGAAACATGCATGTTTTCCCACTGTTTTGTGTATTATCATCTTATCATCTCATTTTCTCCATAAAAGGCAATTCTCGTCCCACATGGGTTGGAAGATTTTCCGGGAAAATTTCGAGGGAAAGTTTTGGCAGAGCGTCCAAATGGATTTGTGTAACAAGAACAGAAAGATTTCAATTCCTATCAGTTTTCACTTTTCATCTAAAGGCCAAACAACAACTGGTTCGAATCTCTCTCTCTCTACTACAGGACATTCACCAGAAAAAATATCAAGCAATCCCATCAATCCTTCTCTCTTACTTTCTATCTTCACCAACGTGGTGATTACCGATTTCCACTCCGCTCATATATTCTACACCAGAAAGCCAGATTCCCACCGAACGGAGCTGCCTCTTGGATTTCCTTCTTCCTGA

Protein sequence

MNAFFRSKSTEVAGLEKHACFPTVLCIIILSSHFLHKRQFSSHMGWKIFRENFEGKFWQSVQMDLCNKNRKISIPISFHFSSKGQTTTGSNLSLSTTGHSPEKISSNPINPSLLLSIFTNVVITDFHSAHIFYTRKPDSHRTELPLGFPSS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh03G001600CmaCh03G001600gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh03G001600.1CmaCh03G001600.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh03G001600.1.CDS.3CmaCh03G001600.1.CDS.3CDS
CmaCh03G001600.1.CDS.2CmaCh03G001600.1.CDS.2CDS
CmaCh03G001600.1.CDS.1CmaCh03G001600.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh03G001600.1.exon.3CmaCh03G001600.1.exon.3exon
CmaCh03G001600.1.exon.2CmaCh03G001600.1.exon.2exon
CmaCh03G001600.1.exon.1CmaCh03G001600.1.exon.1exon