CmaCh03G001360.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAGAGATCATCAGACCAAACAGACTAATTTCTAAATTTAGGCAGCACTCTCCGCTGCCGCAGTCTCCGGCTTCCGATGAAATCGCCGCCCCCCTTTCCCCTCTCCGAGCAATCACAGTGGTTCCAGCCCCTAACCCGCGTCGTTGACGAGATTGCGCCGCCGCCGCTCATTTTTCAGATTCTCGAGGTTTTATTTTTTGTTTTGTTGGGTTATGTTGGTTTATTTTCTTCCACGGAGAAAATTGTGAACAATTTTTTTCTTGTTTTTTTGTTGATTTCTTCTTCATTCAATGTTCAACTAGTCTAAATGAAAACATAAAACTAAGAATGTATACATCACAAATTAGTACCAAGAAAAAAAAAACAAAAAACAGATTGAATCGATCAATAAAAAGGAACAGTAATACATGGATTCAATAATAAAGAGGAAATTTCGTTTAAGAAAATTTGTTAGGAACCATGACACTCCATGAAATTGTTCACTTTGAGGATGAATTTCTTACTTATAAATGTAGGATCATTCTCTTACTTAGTCAACGTGGGACTTCTTTCCCAATAATCCTCCCCTCGAACAAAATACACCATAGAGCCACCCCTTAGGCCTATGAAGCCTTCGAACAACCTTTCCTTAATCGAGACTTAACTCCTTCTCTGGAGCTTCGAACAAAGTACACCCTTTGTTCAACACTTGAGTCACTTTTGACTACACCTTCGAGACTCAACTTTTTTGTTCAATATTTGAGGATTCTATTGACATAGCTAAGTTAAGGATATGGGTTTGATACCATGTTAGGAACCATGGCCCTCCACAATTGTATGATATTGTCCATTTTGAGCATAGTCTCTCATGGTTTTGCCTTTGGTTTTCCCCAAAGGCCTCATACCAATGGAGATGTATTCCATACTTATAAACCCATGATCATCCCCTTAATTAGCCAATGTCAGACTCCTTCTCGACAATCCTCAACATGCTACCCTTTCGACTATATATGTAGATGAATTGCTGCAGGGAGTCATTTAATTTTCATATGAACTGCTGTAGAGTTGTTAAATGTTCGATTAAATTCCTCTTAGAATGTTGCATTGTATCATTATTTTGTGAAATGGTGTTGGCATTAACAAGAGTGATGAAATGCAATTTAGAATGTCAATTTGCATTGCATCATTATTTTACTGTTTATTGTTTGAAATTATTCATGGCCTGTTCTTTGTCTTCTCTTTTCATAATTCCTGGATTCATGTATAAGAATCAGATTCAGCACTTGTTAGAGTTTTGATTGAAAGCTATGCCGCACCGAACACGACCTATGACTGCGCTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCTAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGGTATTTTCCATTATCACTTGCAAGTTATTTGATTGTTTTTTTGCTCATGTATACAAGCTTGTTATACTTATGATAAATATGCATTGTTCTGTGTTTGGTGGCTATTTTCATTGCCATAGTTACTCTGTTTATCTTTAAAAGTTGTACTGGAGAGGGATTGTTTAGTTTCTAGTTGAGAGATCTGGTGGAGGCTATCACTTGTTAGAGAATGTTATAGTTGTGGGATCGGATTTTCAATCGGAATATGTACGGTTGAGCACTCGGAGAGGGGGGGGGGTTGGATATTTTGAGGAAACTTGAAGAACAATTATGTCCCATAATCCCACATTGGTTGGGGAGGAGAACGAAACACCCTTTGTAAAGGTGTGGAAACCTTCCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGTCCGACACTGGGCCATGTGCCAGTGATATGGTTGTTCCCCGAAACAGGGTAGACACGAGGCGGTGTGCCAGTAAGGATGCTAGGCCTCGAAGAGGGGTGGATTGTGAGATCCCACAATCCCACATTAGTTAGGGAGGAGAACGGAACACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAAATCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATGTGCTAGCGGTGAGCCTGGACCGTTACACATATTGCGAGATCCTACATCAGTTGGGGAGAAGAACGATTGTGAGATCTCATATCGGTTGCGAGGGAAAACGAAGCATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAACAGACGTGTTTTAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGAGGACATCTGCTAGCGGTGAGCTTGAGCCGTTACACATATGAAAGGTTGATGTTCTTTAAAGCTCGACTATGTATTCTATTTTTTGCTCTATCCACTAGATAATCAATTACTATCAGAGCAACAATTACTTGATGGGGCCATTGTGTTGCATGTTTTGTAAAAGAACAACGAAGGATCTTGATCATACTCTTTTAGTTTAGTGGGTAGGTCATGTATTACCTTTCCAGAGGTTGAAGATTTGGTCTCCTACTTCATTTGTTGAACTCAAAAACAAAAAATAAGATTTATCAAGGAACATTAAGGGTATTAAATTAAAGATGTAGGATGCTTGAATTAAAGAGACAGATTAAGATTATAGGCTTTAATGGACAGACTACTGTTAATACCCAATAGTAGGAGTTGGACCAACAAAATCTTTTTAAGAGGAATAAGAGGAAGATGGAGGGCGAACGTGAATCAGTATCGAAGAAAGGAACATTTTTCTTTATGGTTAATATCGAACCATAGGAAGGAGGGATAACATTGAAGTTATTAATTATAACAGCCCACACCCATCGCTAGCAGATATTGTTCTCTTTGGGATTTCCCTTCTGGGCTTAGGTTTTAAAATGCATCTACTAGGGAGAGGTTTTCACACACTTATAAGGAAGGCTTCGTTCCCTTCTCCAACCATTGTGGGATCTCACAATCCACCCCCTTTTGGGGCCCAGTGTCCTCGTTGGCACACCGCCCGGTGTCTGGCTCTGTCCTCTTTGGACTTTCCCTTATGGGCTTCTCTCAAGGTTTTAAAATGCATCTGCTAGGGAGAGGTTTCCACACCCTATAAAGAATGTTTCATTCCCATCTCCAACTAATTCGAGATCTCACATTAATTTACAAATTTTTTATTTGAAAACGAATTTTGTTTAAAAAACATTGTCATTTGTGAGAATGATAGACCCCTGGTCCTTAAGATGCATACGCGTGCAAGAAGAAAGGGAAGGGGCCTACTGCAGAGTGGTGAATGTTGTGTTATTGTGTCTTGGAATTCCATAGTTAGTTGTTTGGCATCGTTATGGTTAAGGGAGGGAGTATATGAGTTGGGCTGCTGACCGCATTATGTATATTTTGACACTTTTGGCTGATTGAGTATTGAGAGATTTTGTAACAGCTCAAATAGCTAACAAATATTATCCTTTTTGGAAAGTGATATTGTCCTCTTTGGGCTTTCCCTTCCATGCTTCCCCCCAAAGTTTTAAAATGCATCTACTAGGGAGAGGTTTTCACACCTTTAAAAGGAATGTTTCATTCCCCTCTCCAATTGATGTGGGATCTCACAATCCACCCGCTTGAGTGTCCAGCATTCTCGCTGCCACTCCACCTGGTGCCTGGCTTTGATACCATTTGTAACAGCCCAAACCCACCGCTACCAGATATTGTCCTCTTTGGGCTTTCCCTTCTGGGCTTTCTCTCAAGGTTTTAAAACACGTCCATAGGGATAGATTTTCACACCCTTATAAGGAATGTTTCTTTTCCCTCTCCAATCGATGTGAGATCTCACAATCCATCTCCTTGGGGGTCTAGTGTTCTTGCTGGCACACCGCTCGATGTCTAGCTCAGATACCATTTGTAACAACTCAAGCCCACCGCTAAAAGATATTGTCCTGTTTGGACTTTCCCTTCCGGGCTTCCCCTTAAGGTTTTAAAACGCGTCAACTAAGGAGAGATTTCCACACTCTTATAAGGAATACTTCATTCCCCTCTCCAACCGATATGGGATCTCACAGATCTTCTTCTGCTTGTTCTTATTTTTCGTGAAAATGAACTAGGACTCGTCAAGAACATACTAAAAGGAAAACAAGAAAGAGTGGCAATGCAATCATGCTTTTATATAACTTATTGCTATAAAACAACGTAAAACTGTCCTGAAAACAGTTTTCTTCCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAGTAAGCTGGCTTTGCTGCTCTTTTGTATTACACTTACCTAGCCATCTGCTTAGACAGCAAGTTCATGAGTTTTTTGCTTGACATCCACAAACATGTTTATGACAAGAACATTTATTATTATCAGATCAAAACTTCAAAAAAAGACATCTCTGTTATTTTGTGATAGATGTTCTTATATTCTGGCTGCAGAGAGAACTGTGTCATCAGCAACACGAAGCTGCGATCGGGAAGAGCGTTTAGAATACAGACGAGCATCTAAATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGGTGAGATTTTCTCTTATCCTTTCAATCATTCAAGAAATGAAGATAAGAATGGGATAAGAAAGCCCTTTGGTTGCCAACTGCAGGATTTATTGTCCACTGATTGCAGAATTGGACCATTAGATTCACAAGCTGTCATGGTTGATATGTCATAA GGAGAGAGATCATCAGACCAAACAGACTAATTTCTAAATTTAGGCAGCACTCTCCGCTGCCGCAGTCTCCGGCTTCCGATGAAATCGCCGCCCCCCTTTCCCCTCTCCGAGCAATCACAGTGGTTCCAGCCCCTAACCCGCGTCGTTGACGAGATTGCGCCGCCGCCGCTCATTTTTCAGATTCTCGAGATTCAGCACTTGTTAGAGTTTTGATTGAAAGCTATGCCGCACCGAACACGACCTATGACTGCGCTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCTAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGTTTTCTTCCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAAGAGAACTGTGTCATCAGCAACACGAAGCTGCGATCGGGAAGAGCGTTTAGAATACAGACGAGCATCTAAATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGAATTGGACCATTAGATTCACAAGCTGTCATGGTTGATATGTCATAA ATGCCGCACCGAACACGACCTATGACTGCGCTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCTAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGTTTTCTTCCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAAGAGAACTGTGTCATCAGCAACACGAAGCTGCGATCGGGAAGAGCGTTTAGAATACAGACGAGCATCTAAATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGAATTGGACCATTAGATTCACAAGCTGTCATGGTTGATATGTCATAA MPHRTRPMTALLVFTGLNVVLVSTITLVYDFICFHPYWERRFSSWISLCSNHPVSSNIPEYVKRTVSSATRSCDREERLEYRRASKLHLSSPYCDLCRIGPLDSQAVMVDMS
BLAST of CmaCh03G001360.1 vs. TrEMBL
Match: A0A067K479_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18418 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.0e-13 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. TrEMBL
Match: A0A0J8CSZ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062970 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 6.5e-13 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. TrEMBL
Match: A0A061DIY8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_001457 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 8.5e-13 Identity = 51/110 (46.36%), Postives = 56/110 (50.91%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. TrEMBL
Match: I3S7E5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.2e-12 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. TrEMBL
Match: A0A0V0H5I4_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.2e-12 Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. TAIR10
Match: AT5G09225.1 (AT5G09225.1 unknown protein) HSP 1 Score: 70.9 bits (172), Expect = 5.8e-13 Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. NCBI nr
Match: gi|778694737|ref|XP_011653856.1| (PREDICTED: uncharacterized protein LOC101220293 [Cucumis sativus]) HSP 1 Score: 85.5 bits (210), Expect = 6.4e-14 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. NCBI nr
Match: gi|1009170767|ref|XP_015866373.1| (PREDICTED: uncharacterized protein LOC107403960 [Ziziphus jujuba]) HSP 1 Score: 85.1 bits (209), Expect = 8.4e-14 Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. NCBI nr
Match: gi|659111357|ref|XP_008455709.1| (PREDICTED: uncharacterized protein LOC103495817 [Cucumis melo]) HSP 1 Score: 83.6 bits (205), Expect = 2.4e-13 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. NCBI nr
Match: gi|697128934|ref|XP_009618521.1| (PREDICTED: uncharacterized protein LOC104110688 isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 82.4 bits (202), Expect = 5.5e-13 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 1
BLAST of CmaCh03G001360.1 vs. NCBI nr
Match: gi|697128932|ref|XP_009618520.1| (PREDICTED: uncharacterized protein LOC104110688 isoform X1 [Nicotiana tomentosiformis]) HSP 1 Score: 82.4 bits (202), Expect = 5.5e-13 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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