CmaCh02G013810.1 (mRNA) Cucurbita maxima (Rimu)

Overview
NameCmaCh02G013810.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr02 : 8038213 .. 8041665 (+)
Sequence length1281
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTACGGCAAGGGGCACCATCGCAGCTTGAAACTGATTGCTCCCTTTCCTCCAAGGAACCATGCTTCTTGATCTTCTTCATCGGTCTCATTAAATACTACACGATTACGTGGGTCACCCGATTTTGCTGTGCTTGAAACTTCAGTGCCGCGTGTGGTGGTCTGTTGCATAATTTTCTGCAGATGTTCAATTCAATTTCAAGAACATTATTGAAACAAATACCAAAGTTTATGACTATGTTCAATAATTCGGCCTTGTTTTAACAATTTTTGCTGTTGTATTTTCCATTAAATTCAATATTGGTCCATCACACGATGTCTAGCTCCAAACATTTATTAATCGAGAAGACTAGCCTCATAGAATAGCCACATAATGCTTTTAAATTACATTTTAACTTCCTGCTTTTCTCAAGAACAGGAGAACAATATATATATATTCTTGCAAATTGCAGCTGAAGATTATTTGATGGGCTAAATTCGGCCCATTTAGGTTATTTGATATGCTAAATTCGGCCCATGTTGTCCACTTCAAAATGGCGCGAAGAACGTAGGGTCGGAATAAGCAAGCCGCAGAGTTCGAAGAGCTCAATTCAAGGAAAAATGAACCGACGGCGACGATTGAAGAGATAACAATTACAGTCCGATCAGAACCGAAAACTCTTATCGCCAATTCACAGTTCTTCCGGCCGCCCTGTCCAACATATATGTGCGCAGGCAGGTATGATTCACGAGCACAAGTTCTTGTTCTTATGCCGCTAATATATATTCCTAGGAGCTGGATTTTCAGAATCAATGCTCGAGGAACGTTGTACTAGACTCCGCTCTAATTATTCCTAAACCGAAGGTCAGTGTTTCAATTCCTATTCATGATGCGAACAATGGGGTTCCCCGTGTATGCTTTAGTTCCATGGATTTCTCAATACTGTTCTTACAAAGCTTCTAACATTCACTCATTCCTTTTTCAAATTAGGTTGCCGACATGTAGAATGCAAAACAATCAAGATAGCAATGAAAACGGCTGAGGATTGGAGTATTAACTCATTCCAAATATGTTGCACCCTGGATTTTTCTACCGCTGACAAATTACTATATCTGGTGTTATAGTGCACATGTCATGTCGGCCTGGGCCTTGGGGTTATGTTTCAGGTTCAACCAATCAGAATTTAGCTGATCTCTATGTTCCTTGCAATACATAGAATATTTTTCGCTGTTGAGATAAGAGTTTCATAGGCCCATATATGTTCTTGAATCTTTTTTAACAATGTAGACAAAATGTGAAATCAATTTTTTTGCGTTTGATATGGTAATTTATGATATTATAGAAGCCGTGTCTTGTCCTGTTTTCTATTGTTTTCAATGGTGTATTATGTTCCTTTCTAGGGAACACTGGTATTGCTCATATCGTATTAATGTCCATTTGATATGGTTTTTATTGTCACTACAAGTTTATCTTTGGATTTTTAGTAGCCATTCTCAGGCGAGCCTGAGCTTTGTCTTGGACGTATGTGCTTTTGTACCAAGCGCTGGTCTCAGATGAGGGTAGATTTTGAGATCTCACATCTTGGAGAGGGGAACAGGGGAACGAAGTATTTTTTATAAGGGTGTGAAAACCTCTCCCCAACAAACACATTTTAGAACCTTAAGAGGAAGCCCGGGAGGGAAAGCCCAAAGAGGATAATATCTGCTAGCGGTAAGCTTGAGTTGTTACATTCTCGCTATCAACAAGCTTGTCCAAATGATGTTTACATTCTCGCTATCAAGAAGCTTGTCCAAATGAAGAAACAAGATACCCAGACAGCCAAACCCATGCCCATTTGATTATTTGATGGAAGTAGTCAAGATTTGTTTAAAGTGCAGTCTACCCTGTTAACTTAACAAACATCACCGTGTTGACTGGGGCAGAGACAGCACATGGCATTGTGCTGAAAATGGCCTGTTTGTATAACCATTTGTGGTCAACTGGCAGAGATTTCGGAGAAAACTTTTATTTTGTCCTCACTTGGACATGCTTATGCAATTTGAAATGGCTTGTTTGCTTACTGAATATGCCTATTTGCTCATTGGTTGGTATGGTTCTGAATATTATTTGTAGATTGCAATGATATGAATATGATTCCCCAACCCCTCTTCCCCAGGTAATCCCACAGATATGGAAACACAAAGATCATATTTGGATGAAGCTTTTGATGGTACAGTTCTTCGCCCTGCCTAATGTTCTGATTTGTATTTTGATATATTATGAATTAGGCAGACACCGGATTGAACTTGAAATACAACATGATGGTGACAAAATGACGGAAATTTTGGAGGTATGGAAGTCTGTAAACTATTGTGTTGAGTGTTTGATCAGTTAGTTATTATGTTTTTGCTGTGATCTAAGACAAGCTATCAAACACGATGAATCTCAGAATTGGAATTGCATCTTATATGACAAACAATTCTGGAAAAACTCGACCCGTTTCTCAGACGGAGGATGAAAAAGAAATACTATACTATGATTGTGTTTTGCTGCTCTCTGGTTTTTGTAGTGGTCAGCGAGGAGCAAGCCTTCGACACTTTGTCTCGGTTGGAGAATCAGAGCCTTCCAAGAAAGCTCTTTTTCTGCTTCCACAATTGGTAATGTTGCTGCTACGACTGAATGTCACTGGAGAATCCCGGAGGAGCTGCGGTGGTGGCGTTGAAGGAACTGTCACTGGTGGGATCTCGAAGGGTTCAAGTGGTGGAGGTGGGTGTCTCCACTCAGGAAGAGGTCCGGCAACAAGCAGAGTCTGAAGCAGAGGGCCTGCTTTCATCACTGCTTCCAAAAGCTTGCCTTTTTCAGGCAATAGCTTCTCTGAAACCAATTCGACCGCGGCCTGCGACGTTGCTTGTAGCGGCAGAGATGTAGCGAACTGTGGTGGTGGAATTGGATCAATGGCAGGAGACGATACAATGCTTTCTTCGCAATCCGACGAGGAGAAGCCATTGTTGGAATCAATTCCTTTCCTTTGTTCATCTTCAACACTGGAAATTCCTGAATGTTGACCTGTTCGGTGCTGAAGGAAAAGCTTCTCAATGAGTAACTTCTGGATCTTTTCATTTGCTTCCTCCCTCTCTCGATTGGCTCTGCTGAAAAGTTCTTTGAGATTAATTATCTGTTCATCTCTCTTTCTTAGCTCCTCATGAACTGCAGCCCTCGTCTGTTCCAGCTCAAGAGTTGCACAAAAAAGCGAATGCCTCAATTCTTCAATGTTCTGTTTGAAAGCACGCAAACCCAACAAAGAAATCAGAAATGGAAACAAACCCAGAAGCCAAATTCTGGAAATATAGATGAAAAGAAAGAACTTTTTTACCATTCCTTGGAAGAAGTAAGCCCAACCCAGAAAAGCGCTGCATTGGTTGTCCATAACAGTTTCAGAGAGAGAGAAAGTGAGTATCAGTTGGTTGGAGGATTGATACTCATAATGTAA

mRNA sequence

ATGGCGGATGTTCAATTCAATTTCAAGAACATTATTGAAACAAATACCAAAGGTCGGAATAAGCAAGCCGCAGAGTTCGAAGAGCTCAATTCAAGGAAAAATGAACCGACGGCGACGATTGAAGAGATAACAATTACAGTCCGATCAGAACCGAAAACTCTTATCGCCAATTCACAGTTCTTCCGGCCGCCCTGTCCAACATATATGTGCGCAGGCAGGTATGATTCACGAGCACAAAATCAATGCTCGAGGAACGTTGTACTAGACTCCGCTCTAATTATTCCTAAACCGAAGGTCAGTGTTTCAATTCCTATTCATGATGCGAACAATGGGGTTCCCCTCTACCCTGTTAACTTAACAAACATCACCGTGTTGACTGGGGCAGAGACAGCACATGGCATTGTGCTGAAAATGGCCTATTGCAATGATATGAATATGATTCCCCAACCCCTCTTCCCCAGACACCGGATTGAACTTGAAATACAACATGATGGTGACAAAATGACGGAAATTTTGGAGCTATCAAACACGATGAATCTCAGAATTGGAATTGCATCTTATATGACAAACAATTCTGGAAAAACTCGACCCGTTTCTCAGACGGAGGATGAAAAAGAAATACTATACTATGATTGTGTTTTGCTGCTCTCTGGTTTTTGTAGTGGTCAGCGAGGAGCAAGCCTTCGACACTTTGTCTCGGTTGGAGAATCAGAGCCTTCCAAGAAAGCTCTTTTTCTGCTTCCACAATTGGTAATGTTGCTGCTACGACTGAATGTCACTGGAGAATCCCGGAGGAGCTGCGGTGGTGGCGTTGAAGGAACTGTCACTGGTGGGATCTCGAAGGGTTCAAGTGGTGGAGGCAATAGCTTCTCTGAAACCAATTCGACCGCGGCCTGCGACGTTGCTTGTAGCGGCAGAGATGTAGCGAACTGTGGTGGTGGAATTGGATCAATGGCAGGAGACGATACAATGCTTTCTTCGCAATCCGACGAGGAGAAGCCATTCCCTCGTCTGTTCCAGCTCAAGAGTTGCACAAAAAAGCGAATGCCTCAATTCTTCAATGTTCTGTTTGAAAGCACGCAAACCCAACAAAGAAATCAGAAATGGAAACAAACCCAGAAGCCAAATTCTGGAAATATAGATGAAAAGAAAGAACTTTTTTACCATTCCTTGGAAGAAGTAAGCCCAACCCAGAAAAGCGCTGCATTGGTTGTCCATAACAGTTTCAGAGAGAGAGAAAGTGAGTATCAGTTGGTTGGAGGATTGATACTCATAATGTAA

Coding sequence (CDS)

ATGGCGGATGTTCAATTCAATTTCAAGAACATTATTGAAACAAATACCAAAGGTCGGAATAAGCAAGCCGCAGAGTTCGAAGAGCTCAATTCAAGGAAAAATGAACCGACGGCGACGATTGAAGAGATAACAATTACAGTCCGATCAGAACCGAAAACTCTTATCGCCAATTCACAGTTCTTCCGGCCGCCCTGTCCAACATATATGTGCGCAGGCAGGTATGATTCACGAGCACAAAATCAATGCTCGAGGAACGTTGTACTAGACTCCGCTCTAATTATTCCTAAACCGAAGGTCAGTGTTTCAATTCCTATTCATGATGCGAACAATGGGGTTCCCCTCTACCCTGTTAACTTAACAAACATCACCGTGTTGACTGGGGCAGAGACAGCACATGGCATTGTGCTGAAAATGGCCTATTGCAATGATATGAATATGATTCCCCAACCCCTCTTCCCCAGACACCGGATTGAACTTGAAATACAACATGATGGTGACAAAATGACGGAAATTTTGGAGCTATCAAACACGATGAATCTCAGAATTGGAATTGCATCTTATATGACAAACAATTCTGGAAAAACTCGACCCGTTTCTCAGACGGAGGATGAAAAAGAAATACTATACTATGATTGTGTTTTGCTGCTCTCTGGTTTTTGTAGTGGTCAGCGAGGAGCAAGCCTTCGACACTTTGTCTCGGTTGGAGAATCAGAGCCTTCCAAGAAAGCTCTTTTTCTGCTTCCACAATTGGTAATGTTGCTGCTACGACTGAATGTCACTGGAGAATCCCGGAGGAGCTGCGGTGGTGGCGTTGAAGGAACTGTCACTGGTGGGATCTCGAAGGGTTCAAGTGGTGGAGGCAATAGCTTCTCTGAAACCAATTCGACCGCGGCCTGCGACGTTGCTTGTAGCGGCAGAGATGTAGCGAACTGTGGTGGTGGAATTGGATCAATGGCAGGAGACGATACAATGCTTTCTTCGCAATCCGACGAGGAGAAGCCATTCCCTCGTCTGTTCCAGCTCAAGAGTTGCACAAAAAAGCGAATGCCTCAATTCTTCAATGTTCTGTTTGAAAGCACGCAAACCCAACAAAGAAATCAGAAATGGAAACAAACCCAGAAGCCAAATTCTGGAAATATAGATGAAAAGAAAGAACTTTTTTACCATTCCTTGGAAGAAGTAAGCCCAACCCAGAAAAGCGCTGCATTGGTTGTCCATAACAGTTTCAGAGAGAGAGAAAGTGAGTATCAGTTGGTTGGAGGATTGATACTCATAATGTAA

Protein sequence

MADVQFNFKNIIETNTKGRNKQAAEFEELNSRKNEPTATIEEITITVRSEPKTLIANSQFFRPPCPTYMCAGRYDSRAQNQCSRNVVLDSALIIPKPKVSVSIPIHDANNGVPLYPVNLTNITVLTGAETAHGIVLKMAYCNDMNMIPQPLFPRHRIELEIQHDGDKMTEILELSNTMNLRIGIASYMTNNSGKTRPVSQTEDEKEILYYDCVLLLSGFCSGQRGASLRHFVSVGESEPSKKALFLLPQLVMLLLRLNVTGESRRSCGGGVEGTVTGGISKGSSGGGNSFSETNSTAACDVACSGRDVANCGGGIGSMAGDDTMLSSQSDEEKPFPRLFQLKSCTKKRMPQFFNVLFESTQTQQRNQKWKQTQKPNSGNIDEKKELFYHSLEEVSPTQKSAALVVHNSFRERESEYQLVGGLILIM
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh02G013810.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh02G013810.1 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of CmaCh02G013810.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh02G013810.1 vs. NCBI nr
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh02G013810CmaCh02G013810gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh02G013810.1CmaCh02G013810.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh02G013810.1.exon.1CmaCh02G013810.1.exon.1exon
CmaCh02G013810.1.exon.2CmaCh02G013810.1.exon.2exon
CmaCh02G013810.1.exon.3CmaCh02G013810.1.exon.3exon
CmaCh02G013810.1.exon.4CmaCh02G013810.1.exon.4exon
CmaCh02G013810.1.exon.5CmaCh02G013810.1.exon.5exon
CmaCh02G013810.1.exon.6CmaCh02G013810.1.exon.6exon
CmaCh02G013810.1.exon.7CmaCh02G013810.1.exon.7exon
CmaCh02G013810.1.exon.8CmaCh02G013810.1.exon.8exon
CmaCh02G013810.1.exon.9CmaCh02G013810.1.exon.9exon
CmaCh02G013810.1.exon.10CmaCh02G013810.1.exon.10exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh02G013810.1.CDS.1CmaCh02G013810.1.CDS.1CDS
CmaCh02G013810.1.CDS.2CmaCh02G013810.1.CDS.2CDS
CmaCh02G013810.1.CDS.3CmaCh02G013810.1.CDS.3CDS
CmaCh02G013810.1.CDS.4CmaCh02G013810.1.CDS.4CDS
CmaCh02G013810.1.CDS.5CmaCh02G013810.1.CDS.5CDS
CmaCh02G013810.1.CDS.6CmaCh02G013810.1.CDS.6CDS
CmaCh02G013810.1.CDS.7CmaCh02G013810.1.CDS.7CDS
CmaCh02G013810.1.CDS.8CmaCh02G013810.1.CDS.8CDS
CmaCh02G013810.1.CDS.9CmaCh02G013810.1.CDS.9CDS
CmaCh02G013810.1.CDS.10CmaCh02G013810.1.CDS.10CDS