CmaCh02G013710.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh02G013710.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr02 : 7999498 .. 8000962 (+)
Sequence length786
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACAACCACTTCACTCAAATTCCTCAGCGCCGCCGTCACCGCCCATTTACGATCAGCCATGATGGGGATGACAATCTGGGTTCACGGCGGCCGGAGGCGGAGAAATGGAGTATGCAAAGCAAGCTAACCCAGATTGTCACCCCATCATAGGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAACCCAGATTGTCACCCCATCATAGGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAACCCAGATTGTCACCCCATCATAGGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAACCCAGATTGTCACCCCATCATAGGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAATCTGTTGACAGGGCTTGTTGTATTTGCAGGGCAATTCCGATCCTTTTGGCATTTTCATACTTTGGACCTGTAATTTCCACCGGATTCGCAGGTTTATTAACCCTTTTTTTTTTTTTTTTTTTTGCTTGAATAATGTCTGCTCGTTTCTGTGTTGGAATTATTGATTCCAAATTTGTAACTTAAATTAAATGGGATAAAATATAACTTAAAATTATATTTAGTCTCTGTATTTTTTTATCTTTTATTTCATGAAAATTATTATTATTATTATTTAACCAGCTTCGATAAAAAAAGAATAAAAAAAAATTCAAAATAAAAATAAGAAAAAAACGCAAATTTAATATTTTGGTATCCAAAACCCAGAGCGGTCCGGTTTCATTGCATTCCCTTTAGAATACCGAACCGTTGCGGTTCTTGTTCACATAATCGTGATATGGGCCTTATGCATTGTGAATCCGGCCCAGTTCTGGTAAATCTCCCGCGAATTCCACGGTGTATATTAGAAAATTAAAAAACGGAAAATATATTTGGCAAGCTGTGATTGGCTGATGCGCGATTCTGTATGACGTGTAAAGATCCTCTTAGGTCTAAGCCGCGAAAATTATAAAGTTAAAAAAATTATTTATTTATTTACAACGTGGAGCTGCGTCGTAGTAGAACAGATTGCGTTTCTGTTATTTTCACGCACCAAATTGCCCTCAGAACAGTATTCTTTATACGACGTCGTATTGCCCTCTTCACATTGCCCTAATCTTTTCCGTCTTCGTCTTCAGAGGGCTATTTTCGGTATTATGTAAAACTGGGTCTTCTTCTCCTTTTTCGTTTTGCCTTCATTCAAGAAACCGACTCTGTGCAGTGCTCTCCTTTCTCTTCTCCTTCTTCCCCAATCCATAA

mRNA sequence

TACAACCACTTCACTCAAATTCCTCAGCGCCGCCGTCACCGCCCATTTACGATCAGCCATGATGGGGATGACAATCTGGGTTCACGGCGGCCGGAGGCGGAGAAATGGAGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAACCCAGATTGTCACCCCATCATAGGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAACCCAGATTGTCACCCCATCATAGGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAATCTGTTGACAGGGCTTGTTGTATTTGCAGGGCAATTCCGATCCTTTTGGCATTTTCATACTTTGGACCTAGCGGTCCGGTTTCATTGCATTCCCTTTAGAATACCGAACCGTTGCGGTTCTTGTTCACATAATCGTGATATGGGCCTTATGCATTGTGAATCCGGCCCAGTTCTGAACAGTATTCTTTATACGACGTCGTATTGCCCTCTTCACATTGCCCTAATCTTTTCCGTCTTCGTCTTCAGAGGGCTATTTTCGGTATTATGTAAAACTGGGTCTTCTTCTCCTTTTTCGTTTTGCCTTCATTCAAGAAACCGACTCTGTGCAGTGCTCTCCTTTCTCTTCTCCTTCTTCCCCAATCCATAA

Coding sequence (CDS)

TACAACCACTTCACTCAAATTCCTCAGCGCCGCCGTCACCGCCCATTTACGATCAGCCATGATGGGGATGACAATCTGGGTTCACGGCGGCCGGAGGCGGAGAAATGGAGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAACCCAGATTGTCACCCCATCATAGGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAACCCAGATTGTCACCCCATCATAGGTGATCATAGATGGGCGGTGACGGCGGCGCTGGATGTTAGGAAGACCACGGCGGCGGAGGAGAAATGGAGTATGCAAAGCAAGCTGAATCTGTTGACAGGGCTTGTTGTATTTGCAGGGCAATTCCGATCCTTTTGGCATTTTCATACTTTGGACCTAGCGGTCCGGTTTCATTGCATTCCCTTTAGAATACCGAACCGTTGCGGTTCTTGTTCACATAATCGTGATATGGGCCTTATGCATTGTGAATCCGGCCCAGTTCTGAACAGTATTCTTTATACGACGTCGTATTGCCCTCTTCACATTGCCCTAATCTTTTCCGTCTTCGTCTTCAGAGGGCTATTTTCGGTATTATGTAAAACTGGGTCTTCTTCTCCTTTTTCGTTTTGCCTTCATTCAAGAAACCGACTCTGTGCAGTGCTCTCCTTTCTCTTCTCCTTCTTCCCCAATCCATAA

Protein sequence

YNHFTQIPQRRRHRPFTISHDGDDNLGSRRPEAEKWSDHRWAVTAALDVRKTTAAEEKWSMQSKLNPDCHPIIGDHRWAVTAALDVRKTTAAEEKWSMQSKLNPDCHPIIGDHRWAVTAALDVRKTTAAEEKWSMQSKLNLLTGLVVFAGQFRSFWHFHTLDLAVRFHCIPFRIPNRCGSCSHNRDMGLMHCESGPVLNSILYTTSYCPLHIALIFSVFVFRGLFSVLCKTGSSSPFSFCLHSRNRLCAVLSFLFSFFPNP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh02G013710CmaCh02G013710gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh02G013710.1CmaCh02G013710.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh02G013710.1.exon.1CmaCh02G013710.1.exon.1exon
CmaCh02G013710.1.exon.2CmaCh02G013710.1.exon.2exon
CmaCh02G013710.1.exon.3CmaCh02G013710.1.exon.3exon
CmaCh02G013710.1.exon.4CmaCh02G013710.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh02G013710.1.CDS.1CmaCh02G013710.1.CDS.1CDS
CmaCh02G013710.1.CDS.2CmaCh02G013710.1.CDS.2CDS
CmaCh02G013710.1.CDS.3CmaCh02G013710.1.CDS.3CDS
CmaCh02G013710.1.CDS.4CmaCh02G013710.1.CDS.4CDS