CmaCh02G012070.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G012070.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_155
Location	Cma_Chr02 : 7141753 .. 7143875 (-)
Sequence length	621

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCGACCCCTAAATCTCATCTGGGTGTAATTTTTTTCACCTTCATCGCCTTCTTGGCTTCGATTTCTGAGCTTGCTGTGGCCGGATCCGATGCTCCCACTGTCTATGATATCCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTCTCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTCAAATACGGCTCCATCACTGATCTCGATGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAACATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTCTTGTCTTGACTCCTGGAAACGGATTCTTGAGGTATATTCTTAGCCGCCATTCGCTATTGTCAAATCTTTCCTGCTTTGGATTATCTACTTTCGAATCTTGTTTAACTCATGGGTATCTGTTAGTAATCGCTCTGGTTTGTTCATGATTAGAACTCTTTGATTTTGGTACTTTTTATTGTTCTTCCATTTGATGCAGTAAAATTTGTTCAAGATGTTTGACAGATTCTTTGGACTTGAGAGAAATCTTGCATATAAAACACGATGGCGTGTATGAACTCGATTATTAAATGAAACCAGTTCAAGAGAATTTAGACCTTTGTTCTGTCAAAATTTATATTTGGTACCCCACATCGAATATTTCTTTTCAAGCGTTGATTTTTGGTGAGCGCATCATTCTGTGTCTTGAAGTTATCATCTTGTTGGGCAGCCTTTGTCATGACGTGATCAGGATTTTTTTGGTAGAAAATTGTTTGCTCATCTTTTTAAATAGGCAATGAACGAATTTATTGACCAAAACACATAAACGATATACAAAAAGGAGAAGGAATAACTCCAAATGGTCAAGGGAATTACGAAAAGGACTTCCACCCAAGGGAAAATTGTTTGGTTGTCATTCAGGATGTTTGATGGCTTTGATCCAATTTTATAGAACCAAACCATTTTGAAGCATTTTAATGTCTATACCCCTTTTGAATTCCTTTGCTATAAGAAAATTGAACCTCTGAACAATAATCTGGACCTTGAGGAGCCTCGTCTTTCGCTCTTCTCAGTTCTCTGAAATGTTCTGAGATAACGTCAGTGTTTAATTAGTTTTTGACCTTCATATGAAGAAAATGAGGAATATGAACTCAAATTGGCTGATCTTGGCTCTGTCCAGGTTGATTCAGTTAAGTTTCGGCGAGTTGCATCACACCTTTATCGAGTTTAAATTATATTTCATAGTCATTAGGCTGCAACTGTCATATATTGTTATTCAGGACTTGTCACAACTTCAGTGAACAGGTGATCAGATTAAGCTAGACTGCCTTCATTTTGTCTCCTCTATTCTGTTGATGTTATTGTTTCAAATTCTGCTGATGTGATCTTCCAATGAAATGGCCATTTTGGTTGATCGATAATCCAATATGCTAGTTTCAACGAATCTCGTTCTTTAAATTTCATAGCTGCTTGGATTTGGATCAACTCATTGCACATGGCCACTCTGTTTCTCTCACTTATTGCTTGATCACATTGAAACTTCTCGAACATGTTGCTGTTAATTTATATTGGTCTTTGGCATTAGCTAGCTTATCCAGGGGGAATTGTGCAAGATATGCTCAATTACAGGGTTGCTTTGTCTTTTAAGCACCAATATGCTTCACTAGGTTCAAAAAGCTTACTCACTTGTTGCAAATAAGTTAAAAGAATGTTACAAAGTGAGTATGGTTGGAGAGTGATTCTATCATGCTAATACTTTTTCATTGGTGATCACAGCTCCCAACTCCAGTTGATGACATCCAGATGCTAGTCACCGAGTAGCTCTTCGTCCCTTGTCCGAGTTTTTGACCTTCTTGCTGCATTATCTAAATGATCAGAAGAAGAAGTTTAGTAGTTTTCGGTACGTGGTCTCAGTTTAGACGGCAAAATATGAATGTCTATCTTGGTAGACCTATGATGTAA

mRNA sequence

ATGGCGCCGACCCCTAAATCTCATCTGGGTGTAATTTTTTTCACCTTCATCGCCTTCTTGGCTTCGATTTCTGAGCTTGCTGTGGCCGGATCCGATGCTCCCACTGTCTATGATATCCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTCTCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTCAAATACGGCTCCATCACTGATCTCGATGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAACATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTCTTGTCTTGACTCCTGGAAACGGATTCTTGAGCTCCCAACTCCAGTTGATGACATCCAGATGCTAGTCACCGAAAGAAGAAGTTTAGTAGTTTTCGGTACGTGGTCTCAGTTTAGACGGCAAAATATGAATGTCTATCTTGGTAGACCTATGATGTAA

Coding sequence (CDS)

ATGGCGCCGACCCCTAAATCTCATCTGGGTGTAATTTTTTTCACCTTCATCGCCTTCTTGGCTTCGATTTCTGAGCTTGCTGTGGCCGGATCCGATGCTCCCACTGTCTATGATATCCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTCTCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTCAAATACGGCTCCATCACTGATCTCGATGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAACATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTCTTGTCTTGACTCCTGGAAACGGATTCTTGAGCTCCCAACTCCAGTTGATGACATCCAGATGCTAGTCACCGAAAGAAGAAGTTTAGTAGTTTTCGGTACGTGGTCTCAGTTTAGACGGCAAAATATGAATGTCTATCTTGGTAGACCTATGATGTAA

Protein sequence

MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTERRSLVVFGTWSQFRRQNMNVYLGRPMM

Homology

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BLAST of CmaCh02G012070.1 vs. TrEMBL
Match: A0A0A0KX35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280550 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-79
Identity = 141/173 (81.50%), Postives = 157/173 (90.75%), Query Frame = 1


Query: 7   SHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFV 66
           SHLG+IFFTF  FL SI  L+ AGSDAPTVYD+LP+YGLPSGLLPDSV+DY+LSSDGQFV
Sbjct: 4   SHLGLIFFTFFVFLTSIPSLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFV 63

Query: 67  VHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNI 126
           VHLAKPCYI+FDYLVYY KTITGKL+YGSITDLDGIEV+K  +W DVKEIRVDLPPSDNI
Sbjct: 64  VHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNI 123

Query: 127 YFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 180
           YFQVGFINKKLDIDQFKT+HSC+D+ L + L SWKRILELP P+ DIQML+TE
Sbjct: 124 YFQVGFINKKLDIDQFKTIHSCQDNALATSLGSWKRILELPPPIGDIQMLITE 176

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BLAST of CmaCh02G012070.1 vs. TrEMBL
Match: A0A0D2TSS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G005200 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-60
Identity = 114/179 (63.69%), Postives = 135/179 (75.42%), Query Frame = 1


Query: 1   MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MA    SHLG    + I FL SI +   A    P V+D+LP+YGLP GLLP +V DY L 
Sbjct: 1   MAANKNSHLGFSLISLI-FLFSIPKSVSALDPQPAVWDMLPKYGLPGGLLPSTVTDYVLH 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
            DG+F+V L  PCY+ F+YLVYYDKTITGKL YGSITDL GI+V++FL WLDV EI VDL
Sbjct: 61  EDGRFIVTLGSPCYVQFEYLVYYDKTITGKLGYGSITDLKGIQVKRFLFWLDVDEITVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 180
           PP+ +IYFQVGFINKKLD+DQF+TVHSCRD   GSC  SWK +L+LP P +DIQML+TE
Sbjct: 121 PPTGSIYFQVGFINKKLDVDQFQTVHSCRDGVTGSCKYSWKSVLQLPMPTNDIQMLITE 178

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BLAST of CmaCh02G012070.1 vs. TrEMBL
Match: A0A067JTM4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22853 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-59
Identity = 116/183 (63.39%), Postives = 138/183 (75.41%), Query Frame = 1


Query: 2   APTPKSHLGVIFFTFIAFLA---SISELAVAG--SDAPTVYDILPQYGLPSGLLPDSVVD 61
           +P P S LG  F +   FL+    +  L   G   ++ +VY+ILP+YGLPSGLLP+SV++
Sbjct: 3   SPNPNSSLGFAFLSIFLFLSLSKPVLSLYNTGLQDESSSVYEILPKYGLPSGLLPNSVIN 62

Query: 62  YSLSSDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEI 121
           Y+LS DG+F V L KPCYI FDYLVYYDK ITGKL YGSITDL GIEV++F +WL+V EI
Sbjct: 63  YTLSDDGRFAVLLEKPCYIQFDYLVYYDKRITGKLSYGSITDLKGIEVQRFFLWLNVDEI 122

Query: 122 RVDLPPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQML 180
           +VDLPPSD+IYF VG INKKLD+DQFKTV SCRD   GSC   W RILELP P DDI ML
Sbjct: 123 KVDLPPSDSIYFHVGIINKKLDLDQFKTVRSCRDKVSGSCGRVWNRILELPAPSDDIPML 182

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BLAST of CmaCh02G012070.1 vs. TrEMBL
Match: A0A061GS45_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040152 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 110/177 (62.15%), Postives = 139/177 (78.53%), Query Frame = 1


Query: 7   SHLGVIFFTFIAFLASISELAVAGSDA----PTVYDILPQYGLPSGLLPDSVVDYSLSSD 66
           S+LG+   +    L++   L+ A  +     PTV+DILP+YGLPSGLLP +V +YSL +D
Sbjct: 8   SNLGLALISIFLLLSNPISLSEAEPEPAPAPPTVWDILPKYGLPSGLLPSTVTNYSLQND 67

Query: 67  GQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPP 126
           G+F+V L  PCY+ F+YLVYY+KTITGKL YGSITDL GI+V++F +W DV EI+VDLPP
Sbjct: 68  GRFIVVLESPCYVQFEYLVYYEKTITGKLGYGSITDLKGIQVQRFFLWFDVDEIKVDLPP 127

Query: 127 SDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 180
           SD+IYFQVGFINKKLD+DQFKT+HSCRD   GSC  SWK +L+LP P +DIQML+TE
Sbjct: 128 SDSIYFQVGFINKKLDVDQFKTIHSCRDGVTGSCGYSWKSVLQLPMPTNDIQMLITE 184

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BLAST of CmaCh02G012070.1 vs. TrEMBL
Match: M5W0C7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012214mg PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.9e-58
Identity = 113/180 (62.78%), Postives = 146/180 (81.11%), Query Frame = 1


Query: 1   MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAP-TVYDILPQYGLPSGLLPDSVVDYSL 60
           MA  PKSH+G+I    I F++     +++ S++P TV++ILP+YGLPSGLLP SV +Y+L
Sbjct: 1   MALKPKSHMGLIPI-LIFFISINPRPSLSLSESPATVFEILPKYGLPSGLLPSSVSNYTL 60

Query: 61  SSDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVD 120
           S DG+FVV L KPCY+ F+YLVYY+KTITGKL YG+IT+L GI+V++FL W DV EIRVD
Sbjct: 61  SDDGRFVVVLGKPCYVQFEYLVYYEKTITGKLTYGAITELKGIQVQRFLFWFDVDEIRVD 120

Query: 121 LPPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 180
           LPPSD+IYF VG INKKLD+DQF+ VHSCR+   GSCL S KR ++LP+PV+DI+ML+TE
Sbjct: 121 LPPSDSIYFTVGIINKKLDVDQFQNVHSCRNGLSGSCLGSLKRGIQLPSPVEDIEMLITE 179

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BLAST of CmaCh02G012070.1 vs. TAIR10
Match: AT5G19860.1 (AT5G19860.1 Protein of unknown function, DUF538)

HSP 1 Score: 217.6 bits (553), Expect = 7.1e-57
Identity = 104/174 (59.77%), Postives = 134/174 (77.01%), Query Frame = 1


Query: 9   LGVIFFTFIAFLASISELAVAGSDA-PTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVV 68
           + +  F+   F  +   L     D+  TVY++LP+YGLPSGLLPD+V D++LS DG+FVV
Sbjct: 8   ISIFIFSLTLFTTTTHSLNEPDPDSISTVYELLPKYGLPSGLLPDTVTDFTLSDDGRFVV 67

Query: 69  HLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIY 128
           HL   C I FDYLV+YDKTI+G++ YGSIT+L GI+V+KF +WLDV EI+VDLPPSD+IY
Sbjct: 68  HLPNSCEIEFDYLVHYDKTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIY 127

Query: 129 FQVGFINKKLDIDQFKTVHSCRDDGL-GSCLDSWKRILEL-PTPVDDIQMLVTE 180
           F+VGFINKKLDIDQFKT+HSC D+G+ GSC DSWK  LE     +D+ +ML+TE
Sbjct: 128 FKVGFINKKLDIDQFKTIHSCHDNGVSGSCGDSWKSFLEKGQGMMDEAEMLITE 181

[Close]

BLAST of CmaCh02G012070.1 vs. TAIR10
Match: AT1G55265.1 (AT1G55265.1 Protein of unknown function, DUF538)

HSP 1 Score: 115.2 bits (287), Expect = 4.9e-26
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1


Query: 33  APTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVVHLAKPCYINF-DYLVYYDKTITGKL 92
           A  ++D+LP+YG P GLLP++V  Y++S DG F V L   CY+ F D LV+Y K I GKL
Sbjct: 51  ADDIHDLLPRYGFPKGLLPNNVKSYTISDDGDFTVDLISSCYVKFSDQLVFYGKNIAGKL 110

Query: 93  KYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQVGFINKKLDIDQFKTVHSC 149
            YGS+ D+ GI+ ++  +WL +  +  D P S  + F VGF++K L    F+ V SC
Sbjct: 111 SYGSVKDVRGIQAKEAFLWLPITAMESD-PSSATVVFSVGFVSKTLPASMFENVPSC 166

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BLAST of CmaCh02G012070.1 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538)

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-24
Identity = 49/128 (38.28%), Postives = 77/128 (60.16%), Query Frame = 1


Query: 26  LAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVVHLAKPCYINFDYLVYYDK 85
           L+++    PTV+D+L   GLP+GLLP  V  Y L +DG+  V LA PCY  F+  V+++ 
Sbjct: 19  LSLSSPSYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFEA 78

Query: 86  TITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQVGFINKKLDIDQFKTV 145
            + G L YGS+  ++G+  ++  +WL VK+I V+ P S  I F +G   K+L +  F+  
Sbjct: 79  VVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDP 138

Query: 146 HSCRDDGL 154
             C+ DG+
Sbjct: 139 PKCKPDGV 146

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BLAST of CmaCh02G012070.1 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 51/138 (36.96%), Postives = 80/138 (57.97%), Query Frame = 1


Query: 12  IFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSD-GQFVVHLA 71
           I F  +  +A IS ++ A S+  T+Y+IL   GLPSG+ P  V +++   + G+F V+L 
Sbjct: 8   IAFLCLVLVAGIS-ISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLN 67

Query: 72  KPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQV 131
           + C   ++  ++YD  ITG +    I+DL GI  ++  +W  VK IRVD+P S  IYF V
Sbjct: 68  QACEAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDV 127

Query: 132 GFINKKLDIDQFKTVHSC 149
           G + K+  +  F+T   C
Sbjct: 128 GVVRKQYSLSLFETPRDC 144

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BLAST of CmaCh02G012070.1 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19
Identity = 57/171 (33.33%), Postives = 92/171 (53.80%), Query Frame = 1


Query: 9   LGVIFFTFIAFL--ASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSD-GQF 68
           L ++  T + F+  A IS  AV   +  ++ +IL   GLP GL P  V  ++++ + G+F
Sbjct: 2   LRIVQITLLCFVLAAGISISAVIAENE-SIDEILLANGLPLGLFPKGVKGFTVNGETGRF 61

Query: 69  VVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDN 128
            V+L + C   ++  ++YD+ ++G + Y  I DL GI  ++  +WL VK IRVD+P S  
Sbjct: 62  SVYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGL 121

Query: 129 IYFQVGFINKKLDIDQFKTVHSC---RDDG--LGSCLD---------SWKR 163
           I+F VG + K+  +  F+T   C   R D   +GS  D         SWK+
Sbjct: 122 IFFDVGVLRKQYSLSLFETPRDCVAVRGDAEFIGSVFDVAIVSSRSNSWKK 171

[Close]

BLAST of CmaCh02G012070.1 vs. NCBI nr
Match: gi|659097761|ref|XP_008449800.1| (PREDICTED: uncharacterized protein LOC103491580 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.5e-80
Identity = 143/173 (82.66%), Postives = 158/173 (91.33%), Query Frame = 1


Query: 7   SHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFV 66
           SHLG+IFFTF  FL SI  L+ AGSDAPTVYD+LP+YGLPSGLLPDSV+DY+LSSDGQFV
Sbjct: 4   SHLGLIFFTFFVFLTSIPPLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFV 63

Query: 67  VHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNI 126
           VHLAKPCYI+FDYLVYY KTITGKL+YGSITDLDGIEV+K  +W DVKEIRVDLPPSDNI
Sbjct: 64  VHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNI 123

Query: 127 YFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 180
           YFQVGFINKKLDIDQFKT+HSC+D+ L S L SWKRILELP P+DDIQML+TE
Sbjct: 124 YFQVGFINKKLDIDQFKTIHSCQDNALASSLGSWKRILELPPPIDDIQMLITE 176

[Close]

BLAST of CmaCh02G012070.1 vs. NCBI nr
Match: gi|449448818|ref|XP_004142162.1| (PREDICTED: uncharacterized protein LOC101215998 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.6e-79
Identity = 141/173 (81.50%), Postives = 157/173 (90.75%), Query Frame = 1


Query: 7   SHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFV 66
           SHLG+IFFTF  FL SI  L+ AGSDAPTVYD+LP+YGLPSGLLPDSV+DY+LSSDGQFV
Sbjct: 4   SHLGLIFFTFFVFLTSIPSLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFV 63

Query: 67  VHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNI 126
           VHLAKPCYI+FDYLVYY KTITGKL+YGSITDLDGIEV+K  +W DVKEIRVDLPPSDNI
Sbjct: 64  VHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNI 123

Query: 127 YFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 180
           YFQVGFINKKLDIDQFKT+HSC+D+ L + L SWKRILELP P+ DIQML+TE
Sbjct: 124 YFQVGFINKKLDIDQFKTIHSCQDNALATSLGSWKRILELPPPIGDIQMLITE 176

[Close]

BLAST of CmaCh02G012070.1 vs. NCBI nr
Match: gi|1009123859|ref|XP_015878764.1| (PREDICTED: uncharacterized protein LOC107415023 [Ziziphus jujuba])

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-63
Identity = 117/180 (65.00%), Postives = 146/180 (81.11%), Query Frame = 1


Query: 1   MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MAP PK HLG   F  + F++ ++   +  SD PTVY+IL Q+GLPSGLLPDSV  Y+LS
Sbjct: 1   MAPNPKPHLGFALFLLL-FVSIVTTPCLTLSDTPTVYEILSQFGLPSGLLPDSVTSYTLS 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
            DG+F+VHL KPCY+ F+YLVYY+KTITGKL YGSITDL GI+V++ L W DV EI+VDL
Sbjct: 61  DDGRFIVHLEKPCYVEFEYLVYYEKTITGKLSYGSITDLKGIQVKRLLFWFDVDEIKVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLG-SCLDSWKRILELPTPVDDIQMLVTE 180
           PPS++IYFQVG INKKLD++QFKTVHSCRD   G SCL + KR+LELP+P+++IQML+TE
Sbjct: 121 PPSNSIYFQVGIINKKLDVEQFKTVHSCRDGLSGASCLGTLKRVLELPSPMEEIQMLITE 179

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BLAST of CmaCh02G012070.1 vs. NCBI nr
Match: gi|823263323|ref|XP_012464425.1| (PREDICTED: uncharacterized protein LOC105783482 isoform X1 [Gossypium raimondii])

HSP 1 Score: 240.0 bits (611), Expect = 3.8e-60
Identity = 114/179 (63.69%), Postives = 135/179 (75.42%), Query Frame = 1


Query: 1   MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MA    SHLG    + I FL SI +   A    P V+D+LP+YGLP GLLP +V DY L 
Sbjct: 1   MAANKNSHLGFSLISLI-FLFSIPKSVSALDPQPAVWDMLPKYGLPGGLLPSTVTDYVLH 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
            DG+F+V L  PCY+ F+YLVYYDKTITGKL YGSITDL GI+V++FL WLDV EI VDL
Sbjct: 61  EDGRFIVTLGSPCYVQFEYLVYYDKTITGKLGYGSITDLKGIQVKRFLFWLDVDEITVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 180
           PP+ +IYFQVGFINKKLD+DQF+TVHSCRD   GSC  SWK +L+LP P +DIQML+TE
Sbjct: 121 PPTGSIYFQVGFINKKLDVDQFQTVHSCRDGVTGSCKYSWKSVLQLPMPTNDIQMLITE 178

[Close]

BLAST of CmaCh02G012070.1 vs. NCBI nr
Match: gi|802725363|ref|XP_012086040.1| (PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas])

HSP 1 Score: 237.7 bits (605), Expect = 1.9e-59
Identity = 116/183 (63.39%), Postives = 138/183 (75.41%), Query Frame = 1


Query: 2   APTPKSHLGVIFFTFIAFLA---SISELAVAG--SDAPTVYDILPQYGLPSGLLPDSVVD 61
           +P P S LG  F +   FL+    +  L   G   ++ +VY+ILP+YGLPSGLLP+SV++
Sbjct: 3   SPNPNSSLGFAFLSIFLFLSLSKPVLSLYNTGLQDESSSVYEILPKYGLPSGLLPNSVIN 62

Query: 62  YSLSSDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEI 121
           Y+LS DG+F V L KPCYI FDYLVYYDK ITGKL YGSITDL GIEV++F +WL+V EI
Sbjct: 63  YTLSDDGRFAVLLEKPCYIQFDYLVYYDKRITGKLSYGSITDLKGIEVQRFFLWLNVDEI 122

Query: 122 RVDLPPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQML 180
           +VDLPPSD+IYF VG INKKLD+DQFKTV SCRD   GSC   W RILELP P DDI ML
Sbjct: 123 KVDLPPSDSIYFHVGIINKKLDLDQFKTVRSCRDKVSGSCGRVWNRILELPAPSDDIPML 182

The following BLAST results are available for this feature:

BLAST of CmaCh02G012070.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh02G012070.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX35_CUCSA	1.1e-79	81.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280550 PE=4 SV=1	[more]
A0A0D2TSS2_GOSRA	2.6e-60	63.69	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G005200 PE=4 SV=1	[more]
A0A067JTM4_JATCU	1.3e-59	63.39	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22853 PE=4 SV=1	[more]
A0A061GS45_THECC	2.2e-59	62.15	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040152 PE=4 SV=1	[more]
M5W0C7_PRUPE	1.9e-58	62.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012214mg PE=4 SV=1	[more]

BLAST of CmaCh02G012070.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19860.1	7.1e-57	59.77	Protein of unknown function, DUF538	[more]
AT1G55265.1	4.9e-26	44.44	Protein of unknown function, DUF538	[more]
AT5G54530.1	3.5e-24	38.28	Protein of unknown function, DUF538	[more]
AT3G07470.1	1.6e-21	36.96	Protein of unknown function, DUF538	[more]
AT3G07460.2	2.0e-19	33.33	Protein of unknown function, DUF538	[more]

BLAST of CmaCh02G012070.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097761\|ref\|XP_008449800.1\|	1.5e-80	82.66	PREDICTED: uncharacterized protein LOC103491580 [Cucumis melo]	[more]
gi\|449448818\|ref\|XP_004142162.1\|	1.6e-79	81.50	PREDICTED: uncharacterized protein LOC101215998 [Cucumis sativus]	[more]
gi\|1009123859\|ref\|XP_015878764.1\|	1.6e-63	65.00	PREDICTED: uncharacterized protein LOC107415023 [Ziziphus jujuba]	[more]
gi\|823263323\|ref\|XP_012464425.1\|	3.8e-60	63.69	PREDICTED: uncharacterized protein LOC105783482 isoform X1 [Gossypium raimondii]	[more]
gi\|802725363\|ref\|XP_012086040.1\|	1.9e-59	63.39	PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005773	vacuole
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh02G012070	CmaCh02G012070	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh02G012070.1	CmaCh02G012070.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G012070.1.CDS.3	CmaCh02G012070.1.CDS.3	CDS
CmaCh02G012070.1.CDS.2	CmaCh02G012070.1.CDS.2	CDS
CmaCh02G012070.1.CDS.1	CmaCh02G012070.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G012070.1.exon.3	CmaCh02G012070.1.exon.3	exon
CmaCh02G012070.1.exon.2	CmaCh02G012070.1.exon.2	exon
CmaCh02G012070.1.exon.1	CmaCh02G012070.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 19..149 score: 1.4
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 36..143 score: 4.0
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 11..149 score: 1.57
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 5..173 score: 5.1
None	No IPR available	PANTHER	PTHR31676:SF12	SUBFAMILY NOT NAMED	coord: 5..173 score: 5.1