CmaCh02G004400.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACTCTAAGCTCGGCCGACCCGGGTTGGTTTAGGGCTCGTAATACCACTTTTCTTTTCAGTTCTAGGCATAAACGTCCCCCGTTCCCGCCACCATCATCACGATGTTTGCCACAACCACCATGGAGACGTCTGCCACCGTCACCACCACCATCACAACCACGAAAACCTCGAACACCACCATCACGACCACGACAACCTCGGACACCACCATCACGACCACGACAACCTCGAACACCACCACCACGAAGGTTGCCACCATCCCCACCACCATCACGACGGCCTCGAACACCGCCATTGCCGACCCCACAAAATCCAAGAAAGATTATAGTGGGTGGTTCTAAATATTGGCGTCTTGGCTTTGACTATAATGATTGGATACTTAAGAACGGTCCATTTTATCTGAACGATATTCTAGGTAAGCTGTTTATAAGTTCAGTTTTGTTTACAAAATTTAATTCTGAAGCTTAACTTTTTGGAATGGTTTCAACGATTTGCAGTGTTCAAATACGATCGTCCAAATAGTTCAACTCCCCCTCATAATGTTTATTTGCTACCAAACATGCAAAGCTTCAACAAGTGTGATTTTAGAAGGGCTAAATTGGTGGCAAATTTAACACAAGGAAGTGGAAATGGGTTTAATTTTGTTCTTAAACAACAAAAAGCTTACTACTTTGCTTGTGGTGAAGGCATTGGCTTCCATTGCAACATTGGATCCATGAAGTTCTCTATAACCCCACAATCAAGGCGTCTACCATCACCGCTACCACCATCACGACCGCCACGAATACCTCCGCCACGACATGTGCCACCGCTGTTTCCACCACCACCATCAAAACGACCACGAATACCTCCACCACGACAGGTGCCACCACCATCAAAACGACCACGAATACCTCCACCACGACAGGTGCCACCACCGTCACCACCACCACCATCAAAACGACCACGAATACCTCCACCACGACCAATGCCACCACCATTATCTCCACCATCACTACCTCCATCACCATCACCATCCCCATCCCCATCCCCACCTCCATCACCGACTCCACAAATTCCAAGAAAAATCATCGTTGGTGGATCAGAACGATGGCGTCTTGGCTCTGACTATAATGATTGGGCACTTAAAAACGGACCCTTTTATCTAAACGATATTCTAGGTAACTTTAACATCGTGATTTTTCATACTTATTATTACAAAATTTCACTCCCGAACTTATCAAAAGTAATTATTTTTTGCAGTATTCAAATACGATCCTTCCCATAGCGTCTATTTGCTACCAAACATGCAAAGCTTGGTGGATTGTGACTTTGGAACAGCCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGCTTTGAGTTTGTACTCAACCAGCAAAATCCTTACTACTTTGCTTGCGGTGAAGGCAATGGCTTCCATTGCAAACTTGGATCCATGAAGTTCTCTGTAACACCAATAGCTCAAGCTTGAAAAAATGGATTCATGAATACATTTTTGTGATAATAAATGCTATTTATAAATTTTATATAACTTTTGAACTGAGGGATGCACTAATCTAATCTAAATAATACGAGTATTTCTATCCTGTTTTCAGTCTCATAACCATCACTGCGACATCGTCATTCG ATGTCAACTCTAAGCTCGGCCGACCCGGGTTGGTTTAGGGCTCGTAATACCACTTTTCTTTTCAGTTCTAGGCATAAACGTCCCCCGTTCCCGCCACCATCATCACGATGTTTGCCACAACCACCATGGAGACGTCTGCCACCGTCACCACCACCATCACAACCACGAAAACCTCGAACACCACCATCACGACCACGACAACCTCGGACACCACCATCACGACCACGACAACCTCGAACACCACCACCACGAAGGTTGCCACCATCCCCACCACCATCACGACGGCCTCGAACACCGCCATTGCCGACCCCACAAAATCCAAGAAAGATTATAGTGGGTGGTTCTAAATATTGGCGTCTTGGCTTTGACTATAATGATTGGATACTTAAGAACGGTCCATTTTATCTGAACGATATTCTAGTGTTCAAATACGATCGTCCAAATAGTTCAACTCCCCCTCATAATGTTTATTTGCTACCAAACATGCAAAGCTTCAACAAGTGTGATTTTAGAAGGGCTAAATTGGTGGCAAATTTAACACAAGGAAGTGGAAATGGGTTTAATTTTGTTCTTAAACAACAAAAAGCTTACTACTTTGCTTGTGGTGAAGGCATTGGCTTCCATTGCAACATTGGATCCATGAAGTTCTCTATAACCCCACAATCAAGGCGTCTACCATCACCGCTACCACCATCACGACCGCCACGAATACCTCCGCCACGACATGTGCCACCGCTGTTTCCACCACCACCATCAAAACGACCACGAATACCTCCACCACGACAGGTGCCACCACCATCAAAACGACCACGAATACCTCCACCACGACAGGTGCCACCACCGTCACCACCACCACCATCAAAACGACCACGAATACCTCCACCACGACCAATGCCACCACCATTATCTCCACCATCACTACCTCCATCACCATCACCATCCCCATCCCCATCCCCACCTCCATCACCGACTCCACAAATTCCAAGAAAAATCATCGTTGGTGGATCAGAACGATGGCGTCTTGGCTCTGACTATAATGATTGGGCACTTAAAAACGGACCCTTTTATCTAAACGATATTCTAGTATTCAAATACGATCCTTCCCATAGCGTCTATTTGCTACCAAACATGCAAAGCTTGGTGGATTGTGACTTTGGAACAGCCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGCTTTGAGTTTGTACTCAACCAGCAAAATCCTTACTACTTTGCTTGCGGTGAAGGCAATGGCTTCCATTGCAAACTTGGATCCATGAAGTTCTCTGTAACACCAATAGCTCAAGCTTGAAAAAATGGATTCATGAATACATTTTTGTGATAATAAATGCTATTTATAAATTTTATATAACTTTTGAACTGAGGGATGCACTAATCTAATCTAAATAATACGAGTATTTCTATCCTGTTTTCAGTCTCATAACCATCACTGCGACATCGTCATTCG ATGTCAACTCTAAGCTCGGCCGACCCGGGTTGGTTTAGGGCTCGTAATACCACTTTTCTTTTCAGTTCTAGGCATAAACGTCCCCCGTTCCCGCCACCATCATCACGATGTTTGCCACAACCACCATGGAGACGTCTGCCACCGTCACCACCACCATCACAACCACGAAAACCTCGAACACCACCATCACGACCACGACAACCTCGGACACCACCATCACGACCACGACAACCTCGAACACCACCACCACGAAGGTTGCCACCATCCCCACCACCATCACGACGGCCTCGAACACCGCCATTGCCGACCCCACAAAATCCAAGAAAGATTATAGTGGGTGGTTCTAAATATTGGCGTCTTGGCTTTGACTATAATGATTGGATACTTAAGAACGGTCCATTTTATCTGAACGATATTCTAGTGTTCAAATACGATCGTCCAAATAGTTCAACTCCCCCTCATAATGTTTATTTGCTACCAAACATGCAAAGCTTCAACAAGTGTGATTTTAGAAGGGCTAAATTGGTGGCAAATTTAACACAAGGAAGTGGAAATGGGTTTAATTTTGTTCTTAAACAACAAAAAGCTTACTACTTTGCTTGTGGTGAAGGCATTGGCTTCCATTGCAACATTGGATCCATGAAGTTCTCTATAACCCCACAATCAAGGCGTCTACCATCACCGCTACCACCATCACGACCGCCACGAATACCTCCGCCACGACATGTGCCACCGCTGTTTCCACCACCACCATCAAAACGACCACGAATACCTCCACCACGACAGGTGCCACCACCATCAAAACGACCACGAATACCTCCACCACGACAGGTGCCACCACCGTCACCACCACCACCATCAAAACGACCACGAATACCTCCACCACGACCAATGCCACCACCATTATCTCCACCATCACTACCTCCATCACCATCACCATCCCCATCCCCATCCCCACCTCCATCACCGACTCCACAAATTCCAAGAAAAATCATCGTTGGTGGATCAGAACGATGGCGTCTTGGCTCTGACTATAATGATTGGGCACTTAAAAACGGACCCTTTTATCTAAACGATATTCTAGTATTCAAATACGATCCTTCCCATAGCGTCTATTTGCTACCAAACATGCAAAGCTTGGTGGATTGTGACTTTGGAACAGCCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGCTTTGAGTTTGTACTCAACCAGCAAAATCCTTACTACTTTGCTTGCGGTGAAGGCAATGGCTTCCATTGCAAACTTGGATCCATGAAGTTCTCTGTAACACCAATAGCTCAAGCTTGA MSTLSSADPGWFRARNTTFLFSSRHKRPPFPPPSSRCLPQPPWRRLPPSPPPSQPRKPRTPPSRPRQPRTPPSRPRQPRTPPPRRLPPSPPPSRRPRTPPLPTPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYLNDILVFKYDRPNSSTPPHNVYLLPNMQSFNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQSRRLPSPLPPSRPPRIPPPRHVPPLFPPPPSKRPRIPPPRQVPPPSKRPRIPPPRQVPPPSPPPPSKRPRIPPPRPMPPPLSPPSLPPSPSPSPSPSPPPSPTPQIPRKIIVGGSERWRLGSDYNDWALKNGPFYLNDILVFKYDPSHSVYLLPNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVTPIAQA
BLAST of CmaCh02G004400.1 vs. TrEMBL
Match: A0A0A0LIT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G234585 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.3e-60 Identity = 167/270 (61.85%), Postives = 187/270 (69.26%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. TrEMBL
Match: A0A151UAI8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_020562 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.9e-41 Identity = 76/121 (62.81%), Postives = 93/121 (76.86%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. TrEMBL
Match: A0A0D2V906_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G041200 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.9e-40 Identity = 75/118 (63.56%), Postives = 94/118 (79.66%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. TrEMBL
Match: G7JMH1_MEDTR (Plastocyanin-like domain protein OS=Medicago truncatula GN=MTR_4g086710 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.9e-40 Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. TrEMBL
Match: G7JMH4_MEDTR (Plastocyanin-like domain protein OS=Medicago truncatula GN=MTR_4g086740 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 8.4e-40 Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. TAIR10
Match: AT2G15780.1 (AT2G15780.1 Cupredoxin superfamily protein) HSP 1 Score: 148.3 bits (373), Expect = 1.1e-35 Identity = 68/122 (55.74%), Postives = 84/122 (68.85%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. TAIR10
Match: AT2G15770.1 (AT2G15770.1 Cupredoxin superfamily protein) HSP 1 Score: 122.5 bits (306), Expect = 6.6e-28 Identity = 53/115 (46.09%), Postives = 78/115 (67.83%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. TAIR10
Match: AT4G33930.1 (AT4G33930.1 Cupredoxin superfamily protein) HSP 1 Score: 85.5 bits (210), Expect = 8.9e-17 Identity = 54/139 (38.85%), Postives = 75/139 (53.96%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. TAIR10
Match: AT4G34300.1 (AT4G34300.1 Cupredoxin superfamily protein) HSP 1 Score: 84.3 bits (207), Expect = 2.0e-16 Identity = 49/126 (38.89%), Postives = 68/126 (53.97%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. NCBI nr
Match: gi|778669144|ref|XP_011649199.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus]) HSP 1 Score: 240.7 bits (613), Expect = 4.7e-60 Identity = 167/270 (61.85%), Postives = 187/270 (69.26%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. NCBI nr
Match: gi|659118621|ref|XP_008459215.1| (PREDICTED: extensin, partial [Cucumis melo]) HSP 1 Score: 216.9 bits (551), Expect = 7.3e-53 Identity = 106/151 (70.20%), Postives = 121/151 (80.13%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. NCBI nr
Match: gi|1012365145|gb|KYP76327.1| (hypothetical protein KK1_020562 [Cajanus cajan]) HSP 1 Score: 176.0 bits (445), Expect = 1.4e-40 Identity = 76/121 (62.81%), Postives = 93/121 (76.86%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. NCBI nr
Match: gi|823258427|ref|XP_012461918.1| (PREDICTED: uncharacterized protein LOC105781949 [Gossypium raimondii]) HSP 1 Score: 174.5 bits (441), Expect = 4.1e-40 Identity = 75/118 (63.56%), Postives = 94/118 (79.66%), Query Frame = 1
BLAST of CmaCh02G004400.1 vs. NCBI nr
Match: gi|357475485|ref|XP_003608028.1| (plastocyanin-like domain protein [Medicago truncatula]) HSP 1 Score: 173.7 bits (439), Expect = 7.1e-40 Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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