CmaCh01G008980.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G008980.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Peroxiredoxin Q, thioredoxin dependent peroxidase chloroplast
Location	Cma_Chr01 : 5210933 .. 5212240 (-)
Sequence length	1030

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCCACCGCCAAGATAAGATGCAATAGGCAGAAACGGGGGATTTTGAGAGCACATTTTCTGAGAATTTGACGCTCCAAAAATGGCTTCTCTCCCTCACCCAGTAGCACATTTTCTTGTCCCCTCTCTAACTCCCAAAACCCCATCTTCCATTAAACTCCCATTTCTTCCCAAATCCTCCAATTCCCAGTTTCTGGGAGCCCAAATTTGTGTTCGCATTTCCCCTACCTCTGTTCCTTCTTCTTCCTCCTTCAAAATCACCATCTCTTCTAAGGTACATCGCTCTCCTTTGTCGATTTTTGATTCATCATTTGGTTTTTGTGCTTAGATTTTGGGTTTTGGTTGGGTAGGTGAACAAGGGCCAAGCCCCTCCTGCGTTCACCCTGAAAGACCAGGACGGGCGGAATGTGAGCCTCTCTAAATTCAAAGGGAAGCCTGTGGTTGTCTACTTCTACCCTGCCGATGAGACTCCTGGCTGCACCAAGCAGGTACCATTCCTCTTCTCTAAAATGGGATTTCCCTTTCCTTAATCCAAAACCAACAAATTCACATCTCTGCACATTTCTGCACATCTCTGCACATTTCTGCAGGCTTGTGCTTTCAGAGATTCTTATGAGAAGTTCAAGAAAGCAGGGGCTGAGGTTGTCGGCATTAGCGGCGATGATTCATCTTCACACAAGGTAATTACACAAGCCGATATTGTCTCTGTGGGCTTTTCTGCTTTCCATCTCGGCTTTACAAGGGTGTTTCGTTCTCACATTGACATGATTGAAAATGTAGGCTTTTGCAAAGAAATACAGACTTCCATTTACATTGCTGAGTGATGAGGGTAACAAAGTGAGGAAAGAATGGGGAGTTCCTGCCGATCTTTTTGGAACATTGCCTGGACGACAGACTTATGTTCTTGATAAGAATGGGATTGTGCAGCTCATATATAACAATCAGTTCCAACCCGAAAAGCATATTGACGAGACCCTCAAATTACTTCAGAGCCTTTAAATCTATGTATTCCTTGTAGAATTAGGAAGGTGCTATTTGTTGGTATCGGACGATTATCTGGTTCTTGTTGATATCAATTGAAGCAGTTTATGTGTATGGAAGAACTCTTGATAGAATAGTGTTGGTACTCTTTGTTCGGGTTTCTTTTATTATTATTATTTGTTGAACCAAGTCTGTAATGTTAATTGTCTAACAAACTTGATATGAAATCGACCCAATCTCAAGTCAGAACACTTGTTTGAGATTTGAATCATTCCACCAGCAAAATTGATCATGTCGAGCTTGAATAACTCTACATGCAACCTAAAC

mRNA sequence

TCATCCACCGCCAAGATAAGATGCAATAGGCAGAAACGGGGGATTTTGAGAGCACATTTTCTGAGAATTTGACGCTCCAAAAATGGCTTCTCTCCCTCACCCAGTAGCACATTTTCTTGTCCCCTCTCTAACTCCCAAAACCCCATCTTCCATTAAACTCCCATTTCTTCCCAAATCCTCCAATTCCCAGTTTCTGGGAGCCCAAATTTGTGTTCGCATTTCCCCTACCTCTGTTCCTTCTTCTTCCTCCTTCAAAATCACCATCTCTTCTAAGGTGAACAAGGGCCAAGCCCCTCCTGCGTTCACCCTGAAAGACCAGGACGGGCGGAATGTGAGCCTCTCTAAATTCAAAGGGAAGCCTGTGGTTGTCTACTTCTACCCTGCCGATGAGACTCCTGGCTGCACCAAGCAGGCTTGTGCTTTCAGAGATTCTTATGAGAAGTTCAAGAAAGCAGGGGCTGAGGTTGTCGGCATTAGCGGCGATGATTCATCTTCACACAAGGCTTTTGCAAAGAAATACAGACTTCCATTTACATTGCTGAGTGATGAGGGTAACAAAGTGAGGAAAGAATGGGGAGTTCCTGCCGATCTTTTTGGAACATTGCCTGGACGACAGACTTATGTTCTTGATAAGAATGGGATTGTGCAGCTCATATATAACAATCAGTTCCAACCCGAAAAGCATATTGACGAGACCCTCAAATTACTTCAGAGCCTTTAAATCTATGTATTCCTTGTAGAATTAGGAAGGTGCTATTTGTTGGTATCGGACGATTATCTGGTTCTTGTTGATATCAATTGAAGCAGTTTATGTGTATGGAAGAACTCTTGATAGAATAGTGTTGGTACTCTTTGTTCGGGTTTCTTTTATTATTATTATTTGTTGAACCAAGTCTGTAATGTTAATTGTCTAACAAACTTGATATGAAATCGACCCAATCTCAAGTCAGAACACTTGTTTGAGATTTGAATCATTCCACCAGCAAAATTGATCATGTCGAGCTTGAATAACTCTACATGCAACCTAAAC

Coding sequence (CDS)

ATGGCTTCTCTCCCTCACCCAGTAGCACATTTTCTTGTCCCCTCTCTAACTCCCAAAACCCCATCTTCCATTAAACTCCCATTTCTTCCCAAATCCTCCAATTCCCAGTTTCTGGGAGCCCAAATTTGTGTTCGCATTTCCCCTACCTCTGTTCCTTCTTCTTCCTCCTTCAAAATCACCATCTCTTCTAAGGTGAACAAGGGCCAAGCCCCTCCTGCGTTCACCCTGAAAGACCAGGACGGGCGGAATGTGAGCCTCTCTAAATTCAAAGGGAAGCCTGTGGTTGTCTACTTCTACCCTGCCGATGAGACTCCTGGCTGCACCAAGCAGGCTTGTGCTTTCAGAGATTCTTATGAGAAGTTCAAGAAAGCAGGGGCTGAGGTTGTCGGCATTAGCGGCGATGATTCATCTTCACACAAGGCTTTTGCAAAGAAATACAGACTTCCATTTACATTGCTGAGTGATGAGGGTAACAAAGTGAGGAAAGAATGGGGAGTTCCTGCCGATCTTTTTGGAACATTGCCTGGACGACAGACTTATGTTCTTGATAAGAATGGGATTGTGCAGCTCATATATAACAATCAGTTCCAACCCGAAAAGCATATTGACGAGACCCTCAAATTACTTCAGAGCCTTTAA

Protein sequence

MASLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITISSKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGIVQLIYNNQFQPEKHIDETLKLLQSL

Homology

[Close]

BLAST of CmaCh01G008980.1 vs. Swiss-Prot
Match: PRXQ_POPJC (Peroxiredoxin Q, chloroplastic OS=Populus jackii GN=PRXQ PE=1 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.5e-91
Identity = 171/210 (81.43%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITIS 62
           SLP      L+P+L P T SS  LP L KSS SQF G +     S  S+PSSSS K TI 
Sbjct: 5   SLPKHSLPSLLPTLKPITSSSQNLPILSKSSQSQFYGLKFSHSTS-LSIPSSSSVKNTIF 64

Query: 63  SKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 122
           +KVNKGQAPP+FTLKDQDG+ +SLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 65  AKVNKGQAPPSFTLKDQDGKTLSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 124

Query: 123 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVL 182
           KAGAEVVGISGDD SSHKAFAKKYRLPFTLLSDEGNK+RKEWGVPADLFGTLPGRQTYVL
Sbjct: 125 KAGAEVVGISGDDPSSHKAFAKKYRLPFTLLSDEGNKIRKEWGVPADLFGTLPGRQTYVL 184

Query: 183 DKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           DK G+VQLIYNNQFQPEKHIDETLKLLQSL
Sbjct: 185 DKKGVVQLIYNNQFQPEKHIDETLKLLQSL 213

[Close]

BLAST of CmaCh01G008980.1 vs. Swiss-Prot
Match: PERQ_SUASA (Peroxiredoxin Q, chloroplastic OS=Suaeda salsa GN=PRXQ PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.7e-84
Identity = 153/210 (72.86%), Postives = 177/210 (84.29%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITIS 62
           SLP+    F +PS TPK  SS  L  + KS++SQF G ++    S +      S+K +I 
Sbjct: 5   SLPNHSPTFALPSQTPKPHSSQNLSIISKSAHSQFCGIKLSHSSSLSPPLYPRSYKASIV 64

Query: 63  SKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 122
           +KV++G  PPAFTLKDQDG+NVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 65  AKVSEGSMPPAFTLKDQDGKNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 124

Query: 123 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVL 182
           KAGAEV+GISGDDSSSHKAF +KY+LP+TLLSDEGNKVRK+WGVP+DLFG LPGRQTYVL
Sbjct: 125 KAGAEVIGISGDDSSSHKAFKQKYKLPYTLLSDEGNKVRKDWGVPSDLFGALPGRQTYVL 184

Query: 183 DKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           D+NG+V+L+YNNQFQPEKHIDETLK LQSL
Sbjct: 185 DRNGVVRLVYNNQFQPEKHIDETLKFLQSL 214

[Close]

BLAST of CmaCh01G008980.1 vs. Swiss-Prot
Match: PRXQ_GENTR (Peroxiredoxin Q, chloroplastic OS=Gentiana triflora GN=AFP1 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 3.8e-84
Identity = 159/217 (73.27%), Postives = 179/217 (82.49%), Query Frame = 1


Query: 1   MASLPHPVAHFLVPSL----TPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSS 60
           MA++  PVA    PSL    TPK   S  L  +P SS SQ  G +  +  SP+S+P   S
Sbjct: 1   MAAICLPVAKHSFPSLLNTQTPKPLFSQNLHTIPLSSQSQICGLKFLIS-SPSSLPPPPS 60

Query: 61  F--KITISSKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAF 120
           +  +I++ +KV+KG  PP FTLKDQDG+NVSL++FKGKPVVVYFYPADETPGCTKQACAF
Sbjct: 61  YSARISVFAKVSKGSVPPQFTLKDQDGKNVSLTEFKGKPVVVYFYPADETPGCTKQACAF 120

Query: 121 RDSYEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTL 180
           RDSYEKFKKAGAEV+GISGDD SSHKAFAKKYRLP+TLLSDEGNK+R+EWGVPADLFGTL
Sbjct: 121 RDSYEKFKKAGAEVIGISGDDPSSHKAFAKKYRLPYTLLSDEGNKIRREWGVPADLFGTL 180

Query: 181 PGRQTYVLDKNGIVQLIYNNQFQPEKHIDETLKLLQS 212
           PGRQTYVLDKNG VQLIYNNQFQPEKHIDETLK LQS
Sbjct: 181 PGRQTYVLDKNGTVQLIYNNQFQPEKHIDETLKFLQS 216

[Close]

BLAST of CmaCh01G008980.1 vs. Swiss-Prot
Match: PERQ_SEDLI (Peroxiredoxin Q, chloroplastic (Fragment) OS=Sedum lineare GN=PRXQ PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 9.8e-80
Identity = 148/184 (80.43%), Postives = 158/184 (85.87%), Query Frame = 1


Query: 29  LPKSSNSQFLGAQICVRISPTSVPSSSSFKITISSKVNKGQAPPAFTLKDQDGRNVSLSK 88
           L  SS SQF G +     S    PS+   K +I +KV KG  PP FTLKDQ+GR VSLSK
Sbjct: 3   LQTSSQSQFHGLKFS-HASSFKSPSAPLRKNSIFAKVTKGSTPPPFTLKDQEGRPVSLSK 62

Query: 89  FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDDSSSHKAFAKKYRL 148
           FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGD S SHKAFAKKY+L
Sbjct: 63  FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDSSESHKAFAKKYKL 122

Query: 149 PFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGIVQLIYNNQFQPEKHIDETLKL 208
           PFTLLSDEGNKVRKEWGVP+DLFGTLPGR+TYVLDKNG+VQL+YNNQFQPEKHIDETLKL
Sbjct: 123 PFTLLSDEGNKVRKEWGVPSDLFGTLPGRETYVLDKNGVVQLVYNNQFQPEKHIDETLKL 182

Query: 209 LQSL 213
           LQSL
Sbjct: 183 LQSL 185

[Close]

BLAST of CmaCh01G008980.1 vs. Swiss-Prot
Match: PRXQ_ARATH (Peroxiredoxin Q, chloroplastic OS=Arabidopsis thaliana GN=PRXQ PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.0e-77
Identity = 146/197 (74.11%), Postives = 163/197 (82.74%), Query Frame = 1


Query: 15  SLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITISSKVNKGQAPPAF 74
           +L  KT  S+      KSS S F G+ +    S  S  SSSS K  I +KVNKGQA P F
Sbjct: 24  TLVTKTQFSVPT----KSSESNFFGSTL-THSSYISPVSSSSLKGLIFAKVNKGQAAPDF 83

Query: 75  TLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGD 134
           TLKDQ+G+ VSL K+KGKPVV+YFYPADETPGCTKQACAFRDSYEKFKKAGAEV+GISGD
Sbjct: 84  TLKDQNGKPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 143

Query: 135 DSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGIVQLIYNN 194
           DS+SHKAFA KY+LP+TLLSDEGNKVRK+WGVP DLFG LPGRQTYVLDKNG+VQLIYNN
Sbjct: 144 DSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNN 203

Query: 195 QFQPEKHIDETLKLLQS 212
           QFQPEKHIDETLK L++
Sbjct: 204 QFQPEKHIDETLKFLKA 215

[Close]

BLAST of CmaCh01G008980.1 vs. TrEMBL
Match: A0A0A0KBU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014770 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.0e-99
Identity = 189/215 (87.91%), Postives = 196/215 (91.16%), Query Frame = 1


Query: 1   MASLPHPVAHF--LVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSS-F 60
           MASLPHP      L+PSLTPKTPSS KLPFL +SS S F GAQI   I P+S+PSSSS F
Sbjct: 1   MASLPHPKLSLTSLLPSLTPKTPSSNKLPFLSRSSTSHFHGAQISHHILPSSLPSSSSSF 60

Query: 61  KITISSKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120
           K TIS+KVNKGQAPP FTLKDQ+GRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTISAKVNKGQAPPPFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR 180
           YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR
Sbjct: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR 180

Query: 181 QTYVLDKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           QTYVLDKNG+VQLIYNNQFQPEKHI ETLKLLQSL
Sbjct: 181 QTYVLDKNGVVQLIYNNQFQPEKHIGETLKLLQSL 215

[Close]

BLAST of CmaCh01G008980.1 vs. TrEMBL
Match: A9PJX8_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.8e-89
Identity = 171/210 (81.43%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITIS 62
           SLP      L+P+L P T SS  LP L KSS SQF G +     S  S+PSSSS K TI 
Sbjct: 5   SLPKHSLPSLLPTLKPITSSSQNLPILSKSSQSQFYGLKFSHSTS-LSIPSSSSVKNTIF 64

Query: 63  SKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 122
           +KVNKGQAPP+FTLKDQDG+ +SLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 65  AKVNKGQAPPSFTLKDQDGKTLSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 124

Query: 123 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVL 182
           KAGAEVVGISGDD SSHKAFAKKYRLPFTLLSDEGNK+RKEWGVPADLFGTLPGRQTYVL
Sbjct: 125 KAGAEVVGISGDDPSSHKAFAKKYRLPFTLLSDEGNKIRKEWGVPADLFGTLPGRQTYVL 184

Query: 183 DKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           DK G+VQLIYNNQFQPEKHIDETLKLLQSL
Sbjct: 185 DKKGVVQLIYNNQFQPEKHIDETLKLLQSL 213

[Close]

BLAST of CmaCh01G008980.1 vs. TrEMBL
Match: B9HAD0_POPTR (Peroxiredoxin Q family protein OS=Populus trichocarpa GN=POPTR_0006s13980g PE=4 SV=2)

HSP 1 Score: 335.1 bits (858), Expect = 6.2e-89
Identity = 170/210 (80.95%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITIS 62
           SLP      L+P+L P T SS  LP L KSS SQF G +     S  S+PSSSS K TI 
Sbjct: 5   SLPKHSLPSLLPTLKPITSSSQNLPILSKSSQSQFYGLKFSHSTS-LSIPSSSSVKNTIF 64

Query: 63  SKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 122
           +KVNKGQAPP+FTLKDQDG+ +SLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 65  AKVNKGQAPPSFTLKDQDGKTLSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 124

Query: 123 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVL 182
           KAGAEVVGISGDD SSHKAF+KKYRLPFTLLSDEGNK+RKEWGVPADLFGTLPGRQTYVL
Sbjct: 125 KAGAEVVGISGDDPSSHKAFSKKYRLPFTLLSDEGNKIRKEWGVPADLFGTLPGRQTYVL 184

Query: 183 DKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           DK G+VQLIYNNQFQPEKHIDETLKLLQSL
Sbjct: 185 DKKGVVQLIYNNQFQPEKHIDETLKLLQSL 213

[Close]

BLAST of CmaCh01G008980.1 vs. TrEMBL
Match: A0A061GKZ9_THECC (Thioredoxin superfamily protein, Q OS=Theobroma cacao GN=TCM_037475 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.2e-89
Identity = 169/212 (79.72%), Postives = 182/212 (85.85%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIK--LPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKIT 62
           +LP+     L P  TPKT SS+   LP + KSS SQF G +     S  S+PSSS FK +
Sbjct: 6   TLPNRTLPSLFPCHTPKTQSSVSQCLPLVSKSSESQFYGLKFSYS-SSLSIPSSSYFKTS 65

Query: 63  ISSKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEK 122
           IS+KVNKG  PP+F LKDQDG+NVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEK
Sbjct: 66  ISAKVNKGSVPPSFALKDQDGKNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEK 125

Query: 123 FKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTY 182
           FKKAGAEVVGISGDD+SSHKAFAKKYRLPFTLLSDEGNKVRKEWGVP+DLFG LPGRQTY
Sbjct: 126 FKKAGAEVVGISGDDTSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPSDLFGALPGRQTY 185

Query: 183 VLDKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           VLDKNG+VQLIYNNQFQPEKHIDETLKLLQSL
Sbjct: 186 VLDKNGVVQLIYNNQFQPEKHIDETLKLLQSL 216

[Close]

BLAST of CmaCh01G008980.1 vs. TrEMBL
Match: A0A059CN61_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00774 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.4e-87
Identity = 167/209 (79.90%), Postives = 179/209 (85.65%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITIS 62
           SLP      L+P  TP+T S     FLPKS+ SQF G ++    SP SVPSS S K T+ 
Sbjct: 88  SLPKHSLPSLLPPQTPRTQSPRTPTFLPKSTQSQFHGLKLSNSSSP-SVPSSFSAKSTVF 147

Query: 63  SKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 122
           +KVNKGQAPPAFTLKDQDG+ VSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 148 AKVNKGQAPPAFTLKDQDGKTVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 207

Query: 123 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVL 182
           KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSD G+KVRK+WGVP+DLFG LPGRQTYVL
Sbjct: 208 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDVGDKVRKDWGVPSDLFGALPGRQTYVL 267

Query: 183 DKNGIVQLIYNNQFQPEKHIDETLKLLQS 212
           DKNG+VQLIYNNQFQPEKHIDETLK LQS
Sbjct: 268 DKNGVVQLIYNNQFQPEKHIDETLKFLQS 295

[Close]

BLAST of CmaCh01G008980.1 vs. TAIR10
Match: AT3G26060.2 (AT3G26060.2 Thioredoxin superfamily protein)

HSP 1 Score: 285.8 bits (730), Expect = 2.2e-77
Identity = 141/197 (71.57%), Postives = 161/197 (81.73%), Query Frame = 1


Query: 15  SLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITISSKVNKGQAPPAF 74
           +L  KT  S+      KSS S F G+ +      + V SSS   +  + +VNKGQA P F
Sbjct: 24  TLVTKTQFSVPT----KSSESNFFGSTLTHSSYISPVSSSSLKGLIFAKQVNKGQAAPDF 83

Query: 75  TLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGD 134
           TLKDQ+G+ VSL K+KGKPVV+YFYPADETPGCTKQACAFRDSYEKFKKAGAEV+GISGD
Sbjct: 84  TLKDQNGKPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 143

Query: 135 DSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGIVQLIYNN 194
           DS+SHKAFA KY+LP+TLLSDEGNKVRK+WGVP DLFG LPGRQTYVLDKNG+VQLIYNN
Sbjct: 144 DSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNN 203

Query: 195 QFQPEKHIDETLKLLQS 212
           QFQPEKHIDETLK L++
Sbjct: 204 QFQPEKHIDETLKFLKA 216

[Close]

BLAST of CmaCh01G008980.1 vs. TAIR10
Match: AT3G11630.1 (AT3G11630.1 Thioredoxin superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-16
Identity = 64/219 (29.22%), Postives = 103/219 (47.03%), Query Frame = 1


Query: 2   ASLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITI 61
           +SL  P   FL    +P   +S++  F  +SS S        V+     +P        +
Sbjct: 23  SSLSSPSVSFLRTLSSPSASASLRSGFARRSSLSSTSRRSFAVKAQADDLP-------LV 82

Query: 62  SSKVNKGQAPPAFTLKDQDGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEK 121
            +K    +A   F   DQ+   V LS + GK  V+++FYP D T  C  +  AF D + +
Sbjct: 83  GNKAPDFEAEAVF---DQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSE 142

Query: 122 FKKAGAEVVGISGDDSSSHKAFAKKYR-------LPFTLLSDEGNKVRKEWGVPADLFGT 181
           F+K   EV+G+S D   SH A+ +  R       L + L+SD    + K +GV     G 
Sbjct: 143 FEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQG- 202

Query: 182 LPGRQTYVLDKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           +  R  +++DK G++Q    N     + +DET++ LQ+L
Sbjct: 203 IALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQAL 230

[Close]

BLAST of CmaCh01G008980.1 vs. TAIR10
Match: AT5G06290.1 (AT5G06290.1 2-cysteine peroxiredoxin B)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-15
Identity = 66/221 (29.86%), Postives = 108/221 (48.87%), Query Frame = 1


Query: 12  LVPSLTPKTPSSIKLP-FLPKSSNSQFLGAQICVRISP----TSVPSSSSFKITISSKVN 71
           L+PS +     ++  P  +P SS S    + +C   S     T+  S+S     + ++ +
Sbjct: 21  LLPSKSSLLSPTVSFPRIIPSSSASS---SSLCSGFSSLGSLTTNRSASRRNFAVKAQAD 80

Query: 72  K----GQAPPAFTLK---DQDGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSY 131
                G   P F  +   DQ+   V LS++ GK  V+++FYP D T  C  +  AF D Y
Sbjct: 81  DLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 140

Query: 132 EKFKKAGAEVVGISGDDSSSHKAFAKKYR-------LPFTLLSDEGNKVRKEWGVPADLF 191
           E+F+K   EV+G+S D   SH A+ +  R       L + L+SD    + K +GV     
Sbjct: 141 EEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQ 200

Query: 192 GTLPGRQTYVLDKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           G +  R  +++DK G++Q    N     + +DET++ LQ+L
Sbjct: 201 G-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQAL 237

[Close]

BLAST of CmaCh01G008980.1 vs. TAIR10
Match: AT1G48130.1 (AT1G48130.1 1-cysteine peroxiredoxin 1)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-07
Identity = 32/131 (24.43%), Postives = 62/131 (47.33%), Query Frame = 1


Query: 89  FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGDDSSSHK-------A 148
           F     V++ +P D TP CT +  A      +F K G +++G+S DD  SHK       A
Sbjct: 28  FANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIKDIEA 87

Query: 149 FAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGIVQLIYNNQFQPEKH 208
           F    ++ + +++D   ++  +  +  D     P R  +++  +  ++L +       ++
Sbjct: 88  FNHGSKVNYPIIADPNKEIIPQLNM-IDPIENGPSRALHIVGPDSKIKLSFLYPSTTGRN 147

Query: 209 IDETLKLLQSL 213
           +DE L+ L SL
Sbjct: 148 MDEVLRALDSL 157

[Close]

BLAST of CmaCh01G008980.1 vs. NCBI nr
Match: gi|449441230|ref|XP_004138385.1| (PREDICTED: peroxiredoxin Q, chloroplastic [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 1.5e-99
Identity = 189/215 (87.91%), Postives = 196/215 (91.16%), Query Frame = 1


Query: 1   MASLPHPVAHF--LVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSS-F 60
           MASLPHP      L+PSLTPKTPSS KLPFL +SS S F GAQI   I P+S+PSSSS F
Sbjct: 1   MASLPHPKLSLTSLLPSLTPKTPSSNKLPFLSRSSTSHFHGAQISHHILPSSLPSSSSSF 60

Query: 61  KITISSKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120
           K TIS+KVNKGQAPP FTLKDQ+GRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTISAKVNKGQAPPPFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR 180
           YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR
Sbjct: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR 180

Query: 181 QTYVLDKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           QTYVLDKNG+VQLIYNNQFQPEKHI ETLKLLQSL
Sbjct: 181 QTYVLDKNGVVQLIYNNQFQPEKHIGETLKLLQSL 215

[Close]

BLAST of CmaCh01G008980.1 vs. NCBI nr
Match: gi|659126259|ref|XP_008463093.1| (PREDICTED: peroxiredoxin Q, chloroplastic [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 7.2e-99
Identity = 189/215 (87.91%), Postives = 194/215 (90.23%), Query Frame = 1


Query: 1   MASLPHPVAH--FLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSS-F 60
           MASL HP     FL+PSLTPKTPSS KLPFL +SS SQF GAQI   I P S+PSSSS  
Sbjct: 1   MASLVHPTLSLTFLLPSLTPKTPSSNKLPFLSRSSASQFHGAQISHHILPLSLPSSSSSL 60

Query: 61  KITISSKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDS 120
           K TISSKVNKGQ PP FTLKDQDGRNVSLSKFKG+PVVVYFYPADETPGCTKQACAFRDS
Sbjct: 61  KFTISSKVNKGQTPPPFTLKDQDGRNVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDS 120

Query: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR 180
           YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR
Sbjct: 121 YEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGR 180

Query: 181 QTYVLDKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           QTYVLDKNG+VQLIYNNQFQPEKHI ETLKLLQSL
Sbjct: 181 QTYVLDKNGVVQLIYNNQFQPEKHIGETLKLLQSL 215

[Close]

BLAST of CmaCh01G008980.1 vs. NCBI nr
Match: gi|743893393|ref|XP_011039927.1| (PREDICTED: peroxiredoxin Q, chloroplastic [Populus euphratica])

HSP 1 Score: 336.7 bits (862), Expect = 3.0e-89
Identity = 171/210 (81.43%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITIS 62
           SLP      L+P+L P T SS  LP L KSS SQF G +     S  S+PSSSS K TI 
Sbjct: 5   SLPKHSLPSLLPTLKPITSSSQNLPILSKSSQSQFYGLKFSHSTS-LSIPSSSSVKNTIF 64

Query: 63  SKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 122
           +KVNKGQ PP+FTLKDQDG+ +SLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 65  AKVNKGQVPPSFTLKDQDGKTLSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 124

Query: 123 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVL 182
           KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNK+RKEWGVPADLFGTLPGRQTYVL
Sbjct: 125 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKIRKEWGVPADLFGTLPGRQTYVL 184

Query: 183 DKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           DK G+VQLIYNNQFQPEKHIDETLKLLQSL
Sbjct: 185 DKKGVVQLIYNNQFQPEKHIDETLKLLQSL 213

[Close]

BLAST of CmaCh01G008980.1 vs. NCBI nr
Match: gi|75127599|sp|Q6QPJ6.1|PRXQ_POPJC (RecName: Full=Peroxiredoxin Q, chloroplastic; AltName: Full=Thioredoxin reductase; Flags: Precursor [Populus x jackii])

HSP 1 Score: 336.3 bits (861), Expect = 4.0e-89
Identity = 171/210 (81.43%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITIS 62
           SLP      L+P+L P T SS  LP L KSS SQF G +     S  S+PSSSS K TI 
Sbjct: 5   SLPKHSLPSLLPTLKPITSSSQNLPILSKSSQSQFYGLKFSHSTS-LSIPSSSSVKNTIF 64

Query: 63  SKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 122
           +KVNKGQAPP+FTLKDQDG+ +SLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 65  AKVNKGQAPPSFTLKDQDGKTLSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 124

Query: 123 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVL 182
           KAGAEVVGISGDD SSHKAFAKKYRLPFTLLSDEGNK+RKEWGVPADLFGTLPGRQTYVL
Sbjct: 125 KAGAEVVGISGDDPSSHKAFAKKYRLPFTLLSDEGNKIRKEWGVPADLFGTLPGRQTYVL 184

Query: 183 DKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           DK G+VQLIYNNQFQPEKHIDETLKLLQSL
Sbjct: 185 DKKGVVQLIYNNQFQPEKHIDETLKLLQSL 213

[Close]

BLAST of CmaCh01G008980.1 vs. NCBI nr
Match: gi|566176289|ref|XP_002308370.2| (peroxiredoxin Q family protein [Populus trichocarpa])

HSP 1 Score: 335.1 bits (858), Expect = 8.8e-89
Identity = 170/210 (80.95%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 3   SLPHPVAHFLVPSLTPKTPSSIKLPFLPKSSNSQFLGAQICVRISPTSVPSSSSFKITIS 62
           SLP      L+P+L P T SS  LP L KSS SQF G +     S  S+PSSSS K TI 
Sbjct: 5   SLPKHSLPSLLPTLKPITSSSQNLPILSKSSQSQFYGLKFSHSTS-LSIPSSSSVKNTIF 64

Query: 63  SKVNKGQAPPAFTLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 122
           +KVNKGQAPP+FTLKDQDG+ +SLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK
Sbjct: 65  AKVNKGQAPPSFTLKDQDGKTLSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK 124

Query: 123 KAGAEVVGISGDDSSSHKAFAKKYRLPFTLLSDEGNKVRKEWGVPADLFGTLPGRQTYVL 182
           KAGAEVVGISGDD SSHKAF+KKYRLPFTLLSDEGNK+RKEWGVPADLFGTLPGRQTYVL
Sbjct: 125 KAGAEVVGISGDDPSSHKAFSKKYRLPFTLLSDEGNKIRKEWGVPADLFGTLPGRQTYVL 184

Query: 183 DKNGIVQLIYNNQFQPEKHIDETLKLLQSL 213
           DK G+VQLIYNNQFQPEKHIDETLKLLQSL
Sbjct: 185 DKKGVVQLIYNNQFQPEKHIDETLKLLQSL 213

The following BLAST results are available for this feature:

BLAST of CmaCh01G008980.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRXQ_POPJC	2.5e-91	81.43	Peroxiredoxin Q, chloroplastic OS=Populus jackii GN=PRXQ PE=1 SV=1	[more]
PERQ_SUASA	1.7e-84	72.86	Peroxiredoxin Q, chloroplastic OS=Suaeda salsa GN=PRXQ PE=1 SV=1	[more]
PRXQ_GENTR	3.8e-84	73.27	Peroxiredoxin Q, chloroplastic OS=Gentiana triflora GN=AFP1 PE=1 SV=1	[more]
PERQ_SEDLI	9.8e-80	80.43	Peroxiredoxin Q, chloroplastic (Fragment) OS=Sedum lineare GN=PRXQ PE=1 SV=1	[more]
PRXQ_ARATH	2.0e-77	74.11	Peroxiredoxin Q, chloroplastic OS=Arabidopsis thaliana GN=PRXQ PE=1 SV=1	[more]

BLAST of CmaCh01G008980.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBU9_CUCSA	1.0e-99	87.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014770 PE=4 SV=1	[more]
A9PJX8_9ROSI	2.8e-89	81.43	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]
B9HAD0_POPTR	6.2e-89	80.95	Peroxiredoxin Q family protein OS=Populus trichocarpa GN=POPTR_0006s13980g PE=4 ...	[more]
A0A061GKZ9_THECC	6.2e-89	79.72	Thioredoxin superfamily protein, Q OS=Theobroma cacao GN=TCM_037475 PE=4 SV=1	[more]
A0A059CN61_EUCGR	4.4e-87	79.90	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00774 PE=4 SV=1	[more]

BLAST of CmaCh01G008980.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26060.2	2.2e-77	71.57	Thioredoxin superfamily protein	[more]
AT3G11630.1	2.8e-16	29.22	Thioredoxin superfamily protein	[more]
AT5G06290.1	2.4e-15	29.86	2-cysteine peroxiredoxin B	[more]
AT1G48130.1	4.0e-07	24.43	1-cysteine peroxiredoxin 1	[more]

BLAST of CmaCh01G008980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441230\|ref\|XP_004138385.1\|	1.5e-99	87.91	PREDICTED: peroxiredoxin Q, chloroplastic [Cucumis sativus]	[more]
gi\|659126259\|ref\|XP_008463093.1\|	7.2e-99	87.91	PREDICTED: peroxiredoxin Q, chloroplastic [Cucumis melo]	[more]
gi\|743893393\|ref\|XP_011039927.1\|	3.0e-89	81.43	PREDICTED: peroxiredoxin Q, chloroplastic [Populus euphratica]	[more]
gi\|75127599\|sp\|Q6QPJ6.1\|PRXQ_POPJC	4.0e-89	81.43	RecName: Full=Peroxiredoxin Q, chloroplastic; AltName: Full=Thioredoxin reductas...	[more]
gi\|566176289\|ref\|XP_002308370.2\|	8.8e-89	80.95	peroxiredoxin Q family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000866	AhpC/TSA
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0016209	antioxidant activity
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006979	response to oxidative stress
cellular_component	GO:0009534	chloroplast thylakoid
molecular_function	GO:0016209	antioxidant activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0051920	peroxiredoxin activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh01G008980	CmaCh01G008980	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh01G008980.1	CmaCh01G008980.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G008980.1.three_prime_UTR.1	CmaCh01G008980.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G008980.1.CDS.4	CmaCh01G008980.1.CDS.4	CDS
CmaCh01G008980.1.CDS.3	CmaCh01G008980.1.CDS.3	CDS
CmaCh01G008980.1.CDS.2	CmaCh01G008980.1.CDS.2	CDS
CmaCh01G008980.1.CDS.1	CmaCh01G008980.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G008980.1.five_prime_UTR.1	CmaCh01G008980.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G008980.1.exon.4	CmaCh01G008980.1.exon.4	exon
CmaCh01G008980.1.exon.3	CmaCh01G008980.1.exon.3	exon
CmaCh01G008980.1.exon.2	CmaCh01G008980.1.exon.2	exon
CmaCh01G008980.1.exon.1	CmaCh01G008980.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	PFAM	PF00578	AhpC-TSA	coord: 68..190 score: 2.6
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 61..212 score: 1.0
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 66..212 score: 7.59
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 65..212 score: 17
None	No IPR available	PANTHER	PTHR10681	THIOREDOXIN PEROXIDASE	coord: 60..212 score: 1.7