CmaCh00G001210.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCATTCACTCCCTCAACCACCCAACGTATCAACTATTCTCACGCTGCAACACATACCCACCGAGGAGAAAGAACCCTAGCAAATATGTTTTGTTTTCCCTTCCTTCCCCTGCAACTTGTCAGTGTCGTTGTTGTTACTAATCGAGAGGGAATTCATAGTGGTAGAGATGGTCGATAACAATGCTCAGATGATCGGTAAGCTCTTGTTCTTCTAAGTTGTCCGATTCTAATTTTAAAGGATGGATGTTAGGTTATTTTCTTTTCTCATAATTACCACTGTGTGTAGATTCCGTAACATCACGATCATAAGACAAGATCACTGGAGCAAATAGCGAGCGAGGTGTAGCTTGATCGTCATAGAAAAACACAAAAGGCAAATGTAGTACACCTGTATGATGTGATCCTCCTCGAGACTGCAGTTGGGCAACTCGAGACCCGCATGTTGACCCAACCCACACGTTATCCCGAGCGTGTAAGTTGAAACAAGTGGTGGCCATAAGAATAAACAATAATAAAAATAAATAAATACAAAGAAACTAAAAATAAACAATAATAATAAAATTTTAAAATAAAAACATAATAGTTTAGTTGGTTAATAGAGCCTTAAGAAAACAAAATCAAACCAAACCCTATCGCTTTTCTAAATTCATTCTCTTCTTTCCATTCATTTTATTTCAACTCACACGAGATCAACACAGCGCCATGCCCACTCCGAATAACCTAGCAGCGCTTTTGACGGCGGCATTTATTGTCACCACCGCGGCGCCCTTTGCCGGAGCGGAGACGCACCACGTCGTCGGCGGCGACAGGGGATGGGACGTGGATTCGAACATTGCGTCTTGGTCGGCCGGTAGAATATTCAGAGTCGGAGATAAGATCTGTAAGATCCATTCGTTTTCTTTTTTCCTTTTTCGTTTTGTTTTTAATGCGTTTTCTTTTTGTGTGAGAAATTTTGTTTTGGGATTCCCGGAAAATGGGAATCGGAACCGGGTTTATTAATAGTAAAAATATGAAATAAAAGAGTAATGCTGGGGGTAGGGTTCGCGTACTCTGTGGCACACGGTAATGTGGTGGAGCTGGAAAGGAAGGAGGAATTCAAAGCGTGCGATGTAAGCAGGTTCATCAGGGAGTATAGGGACGGCATAGATATCGTCGCCTTGAACGGAGAGGGAATCCGTTACTTCGCGAGTAGCAGAGCAGAGAGGTGCAGGAAGGGCCTCAAACTGCAGGTGCATGTGGAGGCCCAACAACAGAAGGCGGGGACGACAGGAGTTGGCTCAAGGGACGACATGTCGGAGGGGGGTGGTGAGTCAGCAGCAGTTCCACCATCCCCTTCCACGTCTTCAACGCCCTTCGCCATTTCTTATCTCACTCTCTCCCTCTTGCTGGCCGGCCTTGCCTTTACCTATTGGATCAGCTAAGCCCTCTTTTTTTATTTTTTTATTTTTTTATTTTGTTTAATTATGTAACCAATTTGATTTAGATTAAGATTATTAAAGCTTCAGACATATAATAATATTCCATATAATAATCATGCGC TACCATTCACTCCCTCAACCACCCAACGTATCAACTATTCTCACGCTGCAACACATACCCACCGAGGAGAAAGAACCCTAGCAAATATGTTTTGTTTTCCCTTCCTTCCCCTGCAACTTGTCAGTGTCGTTGTTGTTACTAATCGAGAGGGAATTCATAGTGGTAGAGATGGTCGATAACAATGCTCAGATGATCGATTCCGTAACATCACGATCATAAGACAAGATCACTGGAGCAAATAGCGAGCGAGGTGTAGCTTGATCGTCATAGAAAAACACAAAAGGCAAATGTAGTACACCTGTATGATGTGATCCTCCTCGAGACTGCAGTTGGGCAACTCGAGACCCGCATGTTGACCCAACCCACACGTTATCCCGAGCGTCGCCATGCCCACTCCGAATAACCTAGCAGCGCTTTTGACGGCGGCATTTATTGTCACCACCGCGGCGCCCTTTGCCGGAGCGGAGACGCACCACGTCGTCGGCGGCGACAGGGGATGGGACGTGGATTCGAACATTGCGTCTTGGTCGGCCGGTAGAATATTCAGAGTCGGAGATAAGATCTGGTTCGCGTACTCTGTGGCACACGGTAATGTGGTGGAGCTGGAAAGGAAGGAGGAATTCAAAGCGTGCGATGTAAGCAGGTTCATCAGGGAGTATAGGGACGGCATAGATATCGTCGCCTTGAACGGAGAGGGAATCCGTTACTTCGCGAGTAGCAGAGCAGAGAGGTGCAGGAAGGGCCTCAAACTGCAGGTGCATGTGGAGGCCCAACAACAGAAGGCGGGGACGACAGGAGTTGGCTCAAGGGACGACATGTCGGAGGGGGGTGGTGAGTCAGCAGCAGTTCCACCATCCCCTTCCACGTCTTCAACGCCCTTCGCCATTTCTTATCTCACTCTCTCCCTCTTGCTGGCCGGCCTTGCCTTTACCTATTGGATCAGCTAAGCCCTCTTTTTTTATTTTTTTATTTTTTTATTTTGTTTAATTATGTAACCAATTTGATTTAGATTAAGATTATTAAAGCTTCAGACATATAATAATATTCCATATAATAATCATGCGC ATGCCCACTCCGAATAACCTAGCAGCGCTTTTGACGGCGGCATTTATTGTCACCACCGCGGCGCCCTTTGCCGGAGCGGAGACGCACCACGTCGTCGGCGGCGACAGGGGATGGGACGTGGATTCGAACATTGCGTCTTGGTCGGCCGGTAGAATATTCAGAGTCGGAGATAAGATCTGGTTCGCGTACTCTGTGGCACACGGTAATGTGGTGGAGCTGGAAAGGAAGGAGGAATTCAAAGCGTGCGATGTAAGCAGGTTCATCAGGGAGTATAGGGACGGCATAGATATCGTCGCCTTGAACGGAGAGGGAATCCGTTACTTCGCGAGTAGCAGAGCAGAGAGGTGCAGGAAGGGCCTCAAACTGCAGGTGCATGTGGAGGCCCAACAACAGAAGGCGGGGACGACAGGAGTTGGCTCAAGGGACGACATGTCGGAGGGGGGTGGTGAGTCAGCAGCAGTTCCACCATCCCCTTCCACGTCTTCAACGCCCTTCGCCATTTCTTATCTCACTCTCTCCCTCTTGCTGGCCGGCCTTGCCTTTACCTATTGGATCAGCTAA MPTPNNLAALLTAAFIVTTAAPFAGAETHHVVGGDRGWDVDSNIASWSAGRIFRVGDKIWFAYSVAHGNVVELERKEEFKACDVSRFIREYRDGIDIVALNGEGIRYFASSRAERCRKGLKLQVHVEAQQQKAGTTGVGSRDDMSEGGGESAAVPPSPSTSSTPFAISYLTLSLLLAGLAFTYWIS
BLAST of CmaCh00G001210.1 vs. Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3) HSP 1 Score: 65.5 bits (158), Expect = 7.2e-10 Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.7e-09 Identity = 49/165 (29.70%), Postives = 69/165 (41.82%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.0e-08 Identity = 49/163 (30.06%), Postives = 74/163 (45.40%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TrEMBL
Match: A0A0A0LVU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G186640 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.7e-53 Identity = 115/174 (66.09%), Postives = 137/174 (78.74%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TrEMBL
Match: A0A067KW67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03951 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.4e-33 Identity = 83/174 (47.70%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TrEMBL
Match: A0A067L128_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06463 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.7e-32 Identity = 82/167 (49.10%), Postives = 104/167 (62.28%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TrEMBL
Match: V4TRD1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10018260mg PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.7e-32 Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TrEMBL
Match: A0A0B0P9F0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28880 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.3e-31 Identity = 82/172 (47.67%), Postives = 104/172 (60.47%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TAIR10
Match: AT2G26720.1 (AT2G26720.1 Cupredoxin superfamily protein) HSP 1 Score: 79.0 bits (193), Expect = 3.5e-15 Identity = 41/123 (33.33%), Postives = 69/123 (56.10%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13 Identity = 53/174 (30.46%), Postives = 82/174 (47.13%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TAIR10
Match: AT5G07475.1 (AT5G07475.1 Cupredoxin superfamily protein) HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11 Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TAIR10
Match: AT3G53330.1 (AT3G53330.1 plastocyanin-like domain-containing protein) HSP 1 Score: 64.3 bits (155), Expect = 9.0e-11 Identity = 32/98 (32.65%), Postives = 54/98 (55.10%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. TAIR10
Match: AT2G31050.1 (AT2G31050.1 Cupredoxin superfamily protein) HSP 1 Score: 64.3 bits (155), Expect = 9.0e-11 Identity = 37/119 (31.09%), Postives = 59/119 (49.58%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. NCBI nr
Match: gi|659118102|ref|XP_008458947.1| (PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo]) HSP 1 Score: 221.1 bits (562), Expect = 1.6e-54 Identity = 115/171 (67.25%), Postives = 131/171 (76.61%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. NCBI nr
Match: gi|449443558|ref|XP_004139544.1| (PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus]) HSP 1 Score: 216.1 bits (549), Expect = 5.3e-53 Identity = 115/174 (66.09%), Postives = 137/174 (78.74%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. NCBI nr
Match: gi|802578048|ref|XP_012069323.1| (PREDICTED: stellacyanin-like [Jatropha curcas]) HSP 1 Score: 151.0 bits (380), Expect = 2.1e-33 Identity = 83/174 (47.70%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. NCBI nr
Match: gi|657958955|ref|XP_008371022.1| (PREDICTED: early nodulin-like protein 2 [Malus domestica]) HSP 1 Score: 149.8 bits (377), Expect = 4.6e-33 Identity = 77/170 (45.29%), Postives = 105/170 (61.76%), Query Frame = 1
BLAST of CmaCh00G001210.1 vs. NCBI nr
Match: gi|694309093|ref|XP_009354404.1| (PREDICTED: early nodulin-like protein 2 [Pyrus x bretschneideri]) HSP 1 Score: 147.5 bits (371), Expect = 2.3e-32 Identity = 76/179 (42.46%), Postives = 109/179 (60.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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