Cla97C10G201610.1 (mRNA) Watermelon (97103) v2

NameCla97C10G201610.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionShort-chain dehydrogenase/reductase
LocationCla97Chr10 : 31661140 .. 31661439 (+)
Sequence length300
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTGATCGAGACCATGATCAGCAGTTGGGCCAATCTCAAAGGCCATGTCCTTAAGGCCGATGACATAGCCAAGGCCGCGCTATATTTGGCTAGCGATGATGCCAACTATGTCAGCGGCCTCAATCTTGTGGTTGATGGAGGCTATAGTGTTGTCAATCCTTCCATGCTCAAGGCTCTATCTTTATCCAAGAGAGGGAATGAGGATTTCTTCTTCAAAGATTTGGAACTCTTCTTATTACTGGTTAAGGTGGCTGAATTGAGTATTTGTAGGACTTCAGGCCGCCTTTCATCTTAA

mRNA sequence

ATGGAGGTGATCGAGACCATGATCAGCAGTTGGGCCAATCTCAAAGGCCATGTCCTTAAGGCCGATGACATAGCCAAGGCCGCGCTATATTTGGCTAGCGATGATGCCAACTATGTCAGCGGCCTCAATCTTGTGGTTGATGGAGGCTATAGTGTTGTCAATCCTTCCATGCTCAAGGCTCTATCTTTATCCAAGAGAGGGAATGAGGATTTCTTCTTCAAAGATTTGGAACTCTTCTTATTACTGGTTAAGGTGGCTGAATTGAGTATTTGTAGGACTTCAGGCCGCCTTTCATCTTAA

Coding sequence (CDS)

ATGGAGGTGATCGAGACCATGATCAGCAGTTGGGCCAATCTCAAAGGCCATGTCCTTAAGGCCGATGACATAGCCAAGGCCGCGCTATATTTGGCTAGCGATGATGCCAACTATGTCAGCGGCCTCAATCTTGTGGTTGATGGAGGCTATAGTGTTGTCAATCCTTCCATGCTCAAGGCTCTATCTTTATCCAAGAGAGGGAATGAGGATTTCTTCTTCAAAGATTTGGAACTCTTCTTATTACTGGTTAAGGTGGCTGAATTGAGTATTTGTAGGACTTCAGGCCGCCTTTCATCTTAA

Protein sequence

MEVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKALSLSKRGNEDFFFKDLELFLLLVKVAELSICRTSGRLSS
BLAST of Cla97C10G201610.1 vs. NCBI nr
Match: BAA89230.1 (wts2L [Citrullus lanatus])

HSP 1 Score: 110.2 bits (274), Expect = 4.2e-21
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E +ETM+++WANLKG VLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNP+MLK L
Sbjct: 210 EALETMVTTWANLKGRVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPTMLKTL 269

Query: 62  SL 64
            L
Sbjct: 270 KL 271

BLAST of Cla97C10G201610.1 vs. NCBI nr
Match: XP_008442887.1 (PREDICTED: tropinone reductase-like 1 [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E +ETM++SWANLKG VLKADDIA AALYLASDDA YVSGLNLVVDGGYSVVNPSMLK L
Sbjct: 210 EALETMVTSWANLKGCVLKADDIANAALYLASDDAKYVSGLNLVVDGGYSVVNPSMLKTL 269

BLAST of Cla97C10G201610.1 vs. NCBI nr
Match: XP_022934668.1 (tropinone reductase-like 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E +E M++ WANLKG VLKADDIA+AALYLASD+ANYVSGLNLVVDGGYSVVNPSMLK L
Sbjct: 210 EALENMVTGWANLKGCVLKADDIARAALYLASDEANYVSGLNLVVDGGYSVVNPSMLKTL 269

Query: 62  SL 64
            L
Sbjct: 270 KL 271

BLAST of Cla97C10G201610.1 vs. NCBI nr
Match: XP_022934667.1 (tropinone reductase-like 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E +E M++ WANLKG VLKADDIA+AALYLASD+ANYVSGLNLVVDGGYSVVNPSMLK L
Sbjct: 211 EALENMVTGWANLKGCVLKADDIARAALYLASDEANYVSGLNLVVDGGYSVVNPSMLKTL 270

Query: 62  SL 64
            L
Sbjct: 271 KL 272

BLAST of Cla97C10G201610.1 vs. NCBI nr
Match: XP_022983067.1 (tropinone reductase-like 1 [Cucurbita maxima])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E +E M++ WANLKG VLKADDIA+AALYLASD+ANYVSGLNLVVDGGYSVVNPSMLK L
Sbjct: 210 EALENMVTGWANLKGCVLKADDIARAALYLASDEANYVSGLNLVVDGGYSVVNPSMLKTL 269

Query: 62  SL 64
            L
Sbjct: 270 KL 271

BLAST of Cla97C10G201610.1 vs. TrEMBL
Match: tr|Q9SBM0|Q9SBM0_CITLA (Wts2L OS=Citrullus lanatus OX=3654 GN=wts2L PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.8e-21
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E +ETM+++WANLKG VLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNP+MLK L
Sbjct: 210 EALETMVTTWANLKGRVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPTMLKTL 269

Query: 62  SL 64
            L
Sbjct: 270 KL 271

BLAST of Cla97C10G201610.1 vs. TrEMBL
Match: tr|A0A1S3B6U4|A0A1S3B6U4_CUCME (tropinone reductase-like 1 OS=Cucumis melo OX=3656 GN=LOC103486652 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.8e-20
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E +ETM++SWANLKG VLKADDIA AALYLASDDA YVSGLNLVVDGGYSVVNPSMLK L
Sbjct: 210 EALETMVTSWANLKGCVLKADDIANAALYLASDDAKYVSGLNLVVDGGYSVVNPSMLKTL 269

BLAST of Cla97C10G201610.1 vs. TrEMBL
Match: tr|A0A1S3B8G1|A0A1S3B8G1_CUCME (tropinone reductase-like 1 OS=Cucumis melo OX=3656 GN=LOC103487146 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           + IETM +SWANLKG VLKADDIAKA LYLASDDANYVSGLNLVVDGGYSVVNPSML+ +
Sbjct: 211 KAIETMATSWANLKGRVLKADDIAKAVLYLASDDANYVSGLNLVVDGGYSVVNPSMLQTV 270

Query: 62  S 63
           +
Sbjct: 271 N 271

BLAST of Cla97C10G201610.1 vs. TrEMBL
Match: tr|A0A0A0LBH8|A0A0A0LBH8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778290 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0

Query: 1   MEVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKA 60
           +E +ETM++SWANLKG VLKADDIAKAALYL SD+A YVSGLNLVVDGGYSVVNPSMLK 
Sbjct: 209 VEALETMVTSWANLKGCVLKADDIAKAALYLVSDEAKYVSGLNLVVDGGYSVVNPSMLKT 268

Query: 61  L 62
           L
Sbjct: 269 L 269

BLAST of Cla97C10G201610.1 vs. TrEMBL
Match: tr|A0A0A0LE39|A0A0A0LE39_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778300 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.4e-17
Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSML 59
           + IE + +SWANLKG VLKADDIA A LYLASDDANYVSGLNLVVDGGYS VNPSML
Sbjct: 174 KAIEILTTSWANLKGRVLKADDIAMAVLYLASDDANYVSGLNLVVDGGYSFVNPSML 230

BLAST of Cla97C10G201610.1 vs. Swiss-Prot
Match: sp|H9BFQ0|TPRL1_ERYCB (Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.4e-14
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E++E M+S    L G  L+AD IAKAAL+LASD+A YVSG+N+VVDGGYSVVNP +  A+
Sbjct: 209 ELVEAMLSELGTLSGQTLRADGIAKAALFLASDEAYYVSGINMVVDGGYSVVNPRLADAI 268

BLAST of Cla97C10G201610.1 vs. Swiss-Prot
Match: sp|H9BFQ1|TPRL2_ERYCB (Tropinone reductase-like 2 OS=Erythroxylum coca OX=289672 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.6e-14
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 2   EVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 61
           E +E M+S    L G  L+AD IAKAAL+LASD+A YVSG+N+VVDGGYSVVNP ++ ++
Sbjct: 212 EFVEAMLSELGTLSGQTLRADGIAKAALFLASDEAYYVSGINMVVDGGYSVVNPRLVDSI 271

Query: 62  S 63
           +
Sbjct: 272 N 272

BLAST of Cla97C10G201610.1 vs. Swiss-Prot
Match: sp|Q7FAE1|MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.0e-11
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0

Query: 2   EVIETMISSWANLKG-HVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPS 57
           E IE ++++ ANLKG   LKADDIA AAL+LASDD  YVSG NL VDGG SVVN S
Sbjct: 213 EAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSS 268

BLAST of Cla97C10G201610.1 vs. Swiss-Prot
Match: sp|Q94K41|SDR3B_ARATH (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.0e-11
Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 3   VIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNP 56
           V+E   S+ ANLKG VLKA  +A+AAL+LASD++ YVSG NL VDGGYSVV P
Sbjct: 205 VVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVSGQNLAVDGGYSVVKP 257

BLAST of Cla97C10G201610.1 vs. Swiss-Prot
Match: sp|Q94KL8|SILD_PODPE (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-10
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 0

Query: 4   IETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKAL 62
           +E +    ANLKG +L+A+D+A A  YLA D++ YVSGLNLV+DGGY+  NP+   AL
Sbjct: 216 VEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTAL 273

BLAST of Cla97C10G201610.1 vs. TAIR10
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.3e-12
Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 3   VIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNP 56
           V+E   S+ ANLKG VLKA  +A+AAL+LASD++ YVSG NL VDGGYSVV P
Sbjct: 205 VVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVSGQNLAVDGGYSVVKP 257

BLAST of Cla97C10G201610.1 vs. TAIR10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 6.3e-11
Identity = 31/49 (63.27%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 1   MEVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGG 50
           +E +E  + S ANLKG  L+A+DIA+AALYLASD++ YV+G NLVVDGG
Sbjct: 245 VEEMEEFVRSLANLKGETLRANDIAEAALYLASDESKYVNGHNLVVDGG 293

BLAST of Cla97C10G201610.1 vs. TAIR10
Match: AT2G47130.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-10
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 1   MEVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNP 56
           + ++E   ++   LKG VLKA  +A+AAL+LASDD+ YVSG NL VDGGYSVV P
Sbjct: 202 VRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQNLAVDGGYSVVKP 256

BLAST of Cla97C10G201610.1 vs. TAIR10
Match: AT3G29250.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-10
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 1   MEVIETMISSWANLKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVV 54
           ++++E    +  NLKG VLKA  IA+AAL+LASDD+ Y+SG NLVVDGG+SVV
Sbjct: 241 VKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYISGQNLVVDGGFSVV 293

BLAST of Cla97C10G201610.1 vs. TAIR10
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 3.1e-10
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 14  LKGHVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPS 57
           LKG VLKA  +A+ AL+LASDD+ Y+SG NL VDGGY+VV PS
Sbjct: 214 LKGMVLKASHVAQVALFLASDDSAYISGQNLAVDGGYTVVKPS 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BAA89230.14.2e-2185.48wts2L [Citrullus lanatus][more]
XP_008442887.11.0e-1986.67PREDICTED: tropinone reductase-like 1 [Cucumis melo][more]
XP_022934668.11.4e-1982.26tropinone reductase-like 1 isoform X2 [Cucurbita moschata][more]
XP_022934667.11.4e-1982.26tropinone reductase-like 1 isoform X1 [Cucurbita moschata][more]
XP_022983067.11.4e-1982.26tropinone reductase-like 1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
tr|Q9SBM0|Q9SBM0_CITLA2.8e-2185.48Wts2L OS=Citrullus lanatus OX=3654 GN=wts2L PE=2 SV=1[more]
tr|A0A1S3B6U4|A0A1S3B6U4_CUCME6.8e-2086.67tropinone reductase-like 1 OS=Cucumis melo OX=3656 GN=LOC103486652 PE=4 SV=1[more]
tr|A0A1S3B8G1|A0A1S3B8G1_CUCME1.2e-1983.61tropinone reductase-like 1 OS=Cucumis melo OX=3656 GN=LOC103487146 PE=4 SV=1[more]
tr|A0A0A0LBH8|A0A0A0LBH8_CUCSA1.2e-1983.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778290 PE=4 SV=1[more]
tr|A0A0A0LE39|A0A0A0LE39_CUCSA5.4e-1782.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
sp|H9BFQ0|TPRL1_ERYCB4.4e-1461.67Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1[more]
sp|H9BFQ1|TPRL2_ERYCB7.6e-1459.02Tropinone reductase-like 2 OS=Erythroxylum coca OX=289672 PE=2 SV=1[more]
sp|Q7FAE1|MOMAS_ORYSJ6.0e-1167.86Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 ... [more]
sp|Q94K41|SDR3B_ARATH6.0e-1166.04Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b ... [more]
sp|Q94KL8|SILD_PODPE1.3e-1053.45Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 P... [more]
Match NameE-valueIdentityDescription
AT2G47140.13.3e-1266.04NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G51680.16.3e-1163.27NAD(P)-binding Rossmann-fold superfamily protein[more]
AT2G47130.11.1e-1058.18NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G29250.12.4e-1060.38NAD(P)-binding Rossmann-fold superfamily protein[more]
AT2G47120.13.1e-1067.44NAD(P)-binding Rossmann-fold superfamily protein[more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C10G201610Cla97C10G201610gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C10G201610.1.exon.1Cla97C10G201610.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C10G201610.1.CDS.1Cla97C10G201610.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C10G201610.1Cla97C10G201610.1-proteinpolypeptide


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.720coord: 2..60
e-value: 2.5E-10
score: 41.9
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 6..51
e-value: 1.2E-9
score: 38.0
NoneNo IPR availablePANTHERPTHR43180:SF8SUBFAMILY NOT NAMEDcoord: 2..61
NoneNo IPR availablePANTHERPTHR43180FAMILY NOT NAMEDcoord: 2..61
IPR036291NAD(P)-binding domain superfamilySUPERFAMILYSSF51735NAD(P)-binding Rossmann-fold domainscoord: 15..53