Cla97C09G163960.1 (mRNA) Watermelon (97103) v2

NameCla97C09G163960.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionprotein UXT homolog
LocationCla97Chr09 : 1641228 .. 1641988 (+)
Sequence length321
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTCAGTGATGAGGCTGACTCTCTTACTCCCACTTAATTTACCTTTATCCTGCAAATTCAGAGCTTCTCATCTCTACTTGTACAGGCCAGATACACGAAGTATATTTGTAGACGTTGGGCTTGGTTTTCATGTCGAGTTCACATGGTCAGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGGTAAATGTTTAAGTATCGCGGGTGTTGTTTAGATTAGTGCTTATACTAAACCTGTGACTATTAGGATCTTATGTTCCTTTAAGGTTTCAGATTTTCATTTATTGAAGAGCCTGCATTTGTTTTTGTTGTAACCACGCAGACAGATAGAAGAGTACACTCAATTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTATGTATTTCATAACTAACATTTTTCTGTGATCTCTTTGTTTCTTATTTACAAGATTCAATTTAATTATTGTACCTCAATTTTCGTTGATCTTGACTCGCCGCCCTAAGTTCAGTGGTGAAAATGGAACTTTTTTCCTTAAAAAAATCCCTATTAAGTATACAAATATTGACTCTTCTGGGATTCTTAAACTTTCATTTATATCGCTCTAAAGCTACTTTTCTATATTCTTCATTTGTAAGACAAGTGGGATTGGTGAGAGGCGAACAATACGAGTATTTTTAACATTTTTGATTTGTAGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAGGACTGTCGAAGGACGTGTATTTTGA

mRNA sequence

ATGGGCTCAGTGATGAGGCTGACTCTCTTACTCCCACTTAATTTACCTTTATCCTGCAAATTCAGAGCTTCTCATCTCTACTTGTACAGGCCAGATACACGAAGTATATTTGTAGACGTTGGGCTTGGTTTTCATGTCGAGTTCACATGGTCAGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGACAGATAGAAGAGTACACTCAATTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAGGACTGTCGAAGGACGTGTATTTTGA

Coding sequence (CDS)

ATGGGCTCAGTGATGAGGCTGACTCTCTTACTCCCACTTAATTTACCTTTATCCTGCAAATTCAGAGCTTCTCATCTCTACTTGTACAGGCCAGATACACGAAGTATATTTGTAGACGTTGGGCTTGGTTTTCATGTCGAGTTCACATGGTCAGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGACAGATAGAAGAGTACACTCAATTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAGGACTGTCGAAGGACGTGTATTTTGA

Protein sequence

MGSVMRLTLLLPLNLPLSCKFRASHLYLYRPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
BLAST of Cla97C09G163960.1 vs. NCBI nr
Match: XP_008462175.1 (PREDICTED: protein UXT homolog [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDTRSIFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIR
Sbjct: 80  PDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEYTQLIASIKAQIKLVCEGIR 139

Query: 91  ELLQLPAERTVEGRVF 107
           ELLQLPAERTVEGRVF
Sbjct: 140 ELLQLPAERTVEGRVF 155

BLAST of Cla97C09G163960.1 vs. NCBI nr
Match: XP_004141760.1 (PREDICTED: protein UXT homolog [Cucumis sativus] >KGN45393.1 hypothetical protein Csa_7G447080 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 9.7e-32
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDTRSIFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIR
Sbjct: 80  PDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEYTQLIASIKAQIKLVCEGIR 139

Query: 91  ELLQLPAERTVEGRVF 107
           ELLQLPAERTVE RVF
Sbjct: 140 ELLQLPAERTVEERVF 155

BLAST of Cla97C09G163960.1 vs. NCBI nr
Match: XP_022159095.1 (protein UXT homolog [Momordica charantia] >XP_022159096.1 protein UXT homolog [Momordica charantia])

HSP 1 Score: 143.7 bits (361), Expect = 3.7e-31
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDTRSIFVD+GLGFHVEFTWSEAL FISL+EERLARQIEEYTQLIASIKAQIKLVCEGIR
Sbjct: 80  PDTRSIFVDIGLGFHVEFTWSEALNFISLREERLARQIEEYTQLIASIKAQIKLVCEGIR 139

Query: 91  ELLQLPAERTVEGRVF 107
           ELLQLPAER+VEG VF
Sbjct: 140 ELLQLPAERSVEGHVF 155

BLAST of Cla97C09G163960.1 vs. NCBI nr
Match: XP_022992427.1 (protein UXT homolog [Cucurbita maxima])

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-30
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0

Query: 32  DTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRE 91
           DTR IFVDVGLGFHVEFTWSEALKFISLKEERLARQ EEYT LIASIKAQIKLVCEGIRE
Sbjct: 81  DTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQTEEYTHLIASIKAQIKLVCEGIRE 140

Query: 92  LLQLPAERTVEGRVF 107
           LLQLPAE+TVEGRVF
Sbjct: 141 LLQLPAEKTVEGRVF 155

BLAST of Cla97C09G163960.1 vs. NCBI nr
Match: XP_023548070.1 (protein UXT homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.4 bits (350), Expect = 6.9e-30
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0

Query: 32  DTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRE 91
           DT+ IFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYT LIASIKAQIKLVCEGIRE
Sbjct: 81  DTQRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTHLIASIKAQIKLVCEGIRE 140

Query: 92  LLQLPAERTVEGRVF 107
           LLQLPAE+TVEG VF
Sbjct: 141 LLQLPAEKTVEGHVF 155

BLAST of Cla97C09G163960.1 vs. TrEMBL
Match: tr|A0A1S3CHV4|A0A1S3CHV4_CUCME (protein UXT homolog OS=Cucumis melo OX=3656 GN=LOC103500599 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.5e-33
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDTRSIFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIR
Sbjct: 80  PDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEYTQLIASIKAQIKLVCEGIR 139

Query: 91  ELLQLPAERTVEGRVF 107
           ELLQLPAERTVEGRVF
Sbjct: 140 ELLQLPAERTVEGRVF 155

BLAST of Cla97C09G163960.1 vs. TrEMBL
Match: tr|A0A0A0K7F1|A0A0A0K7F1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447080 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.4e-32
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDTRSIFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIR
Sbjct: 80  PDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEYTQLIASIKAQIKLVCEGIR 139

Query: 91  ELLQLPAERTVEGRVF 107
           ELLQLPAERTVE RVF
Sbjct: 140 ELLQLPAERTVEERVF 155

BLAST of Cla97C09G163960.1 vs. TrEMBL
Match: tr|A0A0D2UX98|A0A0D2UX98_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G325600 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDT+ IFVDVGLGFHVEFTWSEALKFISL+EE+L RQIEEYT+LIASIKAQIKLVCEGIR
Sbjct: 76  PDTQRIFVDVGLGFHVEFTWSEALKFISLREEKLERQIEEYTRLIASIKAQIKLVCEGIR 135

Query: 91  ELLQLPAERTVEGRVF 107
           ELLQ+P E+TVEGRVF
Sbjct: 136 ELLQIPEEKTVEGRVF 151

BLAST of Cla97C09G163960.1 vs. TrEMBL
Match: tr|A0A0B0P3Y2|A0A0B0P3Y2_GOSAR (Protein UXT OS=Gossypium arboreum OX=29729 GN=F383_26565 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDT+ IFVDVGLGFHVEFTWSEALKFISL+EE+L RQIEEYT+LIASIKAQIKLVCEGIR
Sbjct: 66  PDTQRIFVDVGLGFHVEFTWSEALKFISLREEKLERQIEEYTRLIASIKAQIKLVCEGIR 125

Query: 91  ELLQLPAERTVEGRVF 107
           ELLQ+P E+TVEGRVF
Sbjct: 126 ELLQIPEEKTVEGRVF 141

BLAST of Cla97C09G163960.1 vs. TrEMBL
Match: tr|A0A0D2QRW1|A0A0D2QRW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G325600 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDT+ IFVDVGLGFHVEFTWSEALKFISL+EE+L RQIEEYT+LIASIKAQIKLVCEGIR
Sbjct: 75  PDTQRIFVDVGLGFHVEFTWSEALKFISLREEKLERQIEEYTRLIASIKAQIKLVCEGIR 134

Query: 91  ELLQLPAERTVEGRVF 107
           ELLQ+P E+TVEGRVF
Sbjct: 135 ELLQIPEEKTVEGRVF 150

BLAST of Cla97C09G163960.1 vs. Swiss-Prot
Match: sp|Q54ND3|UXT_DICDI (Protein UXT homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0285389 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 32  DTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRE 91
           DT  I+VD+GLG HV++T  EA+KFI+ KE  L + +E  T+ I  IK +I L+  G++E
Sbjct: 97  DTSYIYVDIGLGIHVKYTLEEAIKFINEKETFLNKTVENQTKKINQIKTKIDLIQNGLKE 156

Query: 92  LLQL 96
           L  L
Sbjct: 157 LKHL 160

BLAST of Cla97C09G163960.1 vs. Swiss-Prot
Match: sp|A7T0W1|UXT_NEMVE (Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-07
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PD   IF+ VG GF VEFT SEAL FI  K   L   +++  +  A IKA +KLV  G++
Sbjct: 84  PDPSRIFIAVGYGFFVEFTLSEALNFIEKKLAHLQHSVDKLGKDAAKIKAHMKLVLGGLQ 143

Query: 91  EL 93
           EL
Sbjct: 144 EL 145

BLAST of Cla97C09G163960.1 vs. Swiss-Prot
Match: sp|Q63ZY7|UXT_RAT (Protein UXT OS=Rattus norvegicus OX=10116 GN=Uxt PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.6e-07
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 11  LPLNLPLSCKFRASHLYLYRPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEE 70
           L + + L C F    +    PDT  I+V +G GF +E T +EALKFI  K   L    + 
Sbjct: 67  LYMQVDLGCNFFVDTMV---PDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDS 126

Query: 71  YTQLIASIKAQIKLVCEGIREL 93
            T+   +IKA I ++ EG+REL
Sbjct: 127 LTKDSMNIKANIHMMLEGLREL 145

BLAST of Cla97C09G163960.1 vs. Swiss-Prot
Match: sp|Q32P97|UXT_BOVIN (Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 11  LPLNLPLSCKFRASHLYLYRPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEE 70
           L + + L C F    +    PDT  I+V +G GF +E T +EALKFI  K   L    + 
Sbjct: 67  LYMQVDLGCNFFVDTVV---PDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDN 126

Query: 71  YTQLIASIKAQIKLVCEGIREL 93
            T+   +IKA I ++ EG+REL
Sbjct: 127 LTKDSMNIKAHIHMLLEGLREL 145

BLAST of Cla97C09G163960.1 vs. Swiss-Prot
Match: sp|Q9WTZ0|UXT_MOUSE (Protein UXT OS=Mus musculus OX=10090 GN=Uxt PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 11  LPLNLPLSCKFRASHLYLYRPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEE 70
           L + + L C F    +    PDT  I+V +G GF +E T +EALKFI  K   L    + 
Sbjct: 67  LYMQVDLGCNFFVDTVV---PDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDS 126

Query: 71  YTQLIASIKAQIKLVCEGIREL 93
            T+   +IKA I ++ EG+REL
Sbjct: 127 LTKDSMNIKAHIHMMLEGLREL 145

BLAST of Cla97C09G163960.1 vs. TAIR10
Match: AT1G26660.2 (Prefoldin chaperone subunit family protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-15
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 0

Query: 31  PDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIR 90
           PDTR IF+DVGLGF+VEFT  EAL +I+ +EER  +Q+EEYT +I  IK +IKL    I+
Sbjct: 101 PDTRHIFMDVGLGFYVEFTRQEALDYIAQREERTQKQLEEYTGVITQIKGRIKLAHYQIQ 160

Query: 91  ELLQLPAE 99
           ++L LP E
Sbjct: 161 QILNLPEE 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008462175.11.1e-3297.37PREDICTED: protein UXT homolog [Cucumis melo][more]
XP_004141760.19.7e-3296.05PREDICTED: protein UXT homolog [Cucumis sativus] >KGN45393.1 hypothetical protei... [more]
XP_022159095.13.7e-3193.42protein UXT homolog [Momordica charantia] >XP_022159096.1 protein UXT homolog [M... [more]
XP_022992427.12.4e-3094.67protein UXT homolog [Cucurbita maxima][more]
XP_023548070.16.9e-3093.33protein UXT homolog [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
tr|A0A1S3CHV4|A0A1S3CHV4_CUCME7.5e-3397.37protein UXT homolog OS=Cucumis melo OX=3656 GN=LOC103500599 PE=4 SV=1[more]
tr|A0A0A0K7F1|A0A0A0K7F1_CUCSA6.4e-3296.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447080 PE=4 SV=1[more]
tr|A0A0D2UX98|A0A0D2UX98_GOSRA1.7e-2988.16Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G325600 PE=4 ... [more]
tr|A0A0B0P3Y2|A0A0B0P3Y2_GOSAR1.7e-2988.16Protein UXT OS=Gossypium arboreum OX=29729 GN=F383_26565 PE=4 SV=1[more]
tr|A0A0D2QRW1|A0A0D2QRW1_GOSRA1.7e-2988.16Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G325600 PE=4 ... [more]
Match NameE-valueIdentityDescription
sp|Q54ND3|UXT_DICDI1.3e-0846.88Protein UXT homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0285389 PE=3 SV... [more]
sp|A7T0W1|UXT_NEMVE4.3e-0748.39Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1[more]
sp|Q63ZY7|UXT_RAT9.6e-0739.02Protein UXT OS=Rattus norvegicus OX=10116 GN=Uxt PE=2 SV=1[more]
sp|Q32P97|UXT_BOVIN1.3e-0639.02Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1[more]
sp|Q9WTZ0|UXT_MOUSE1.3e-0639.02Protein UXT OS=Mus musculus OX=10090 GN=Uxt PE=1 SV=2[more]
Match NameE-valueIdentityDescription
AT1G26660.21.5e-1557.35Prefoldin chaperone subunit family protein[more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR009053Prefoldin
IPR004127Prefoldin_subunit_alpha
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0016272 prefoldin complex
molecular_function GO:0051082 unfolded protein binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C09G163960Cla97C09G163960gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C09G163960.1Cla97C09G163960.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C09G163960.1.exon.1Cla97C09G163960.1.exon.1exon
Cla97C09G163960.1.exon.2Cla97C09G163960.1.exon.2exon
Cla97C09G163960.1.exon.3Cla97C09G163960.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C09G163960.1.CDS.1Cla97C09G163960.1.CDS.1CDS
Cla97C09G163960.1.CDS.2Cla97C09G163960.1.CDS.2CDS
Cla97C09G163960.1.CDS.3Cla97C09G163960.1.CDS.3CDS


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availablePANTHERPTHR13345:SF4PROTEIN UXTcoord: 29..97
NoneNo IPR availablePANTHERPTHR13345NUT2 AND UXTcoord: 29..97
NoneNo IPR availableSUPERFAMILYSSF46579Prefoldincoord: 30..95
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 31..85
e-value: 1.3E-8
score: 34.6
IPR009053PrefoldinGENE3DG3DSA:1.10.287.370coord: 29..101
e-value: 2.9E-7
score: 32.2