Cla97C08G155610.1 (mRNA) Watermelon (97103) v2

Overview
NameCla97C08G155610.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionurophorphyrin methylase 1
LocationCla97Chr08 : 23631045 .. 23633086 (-)
Sequence length315
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTAATTAACCTACAAGGACCCTACTTGAGTACTGTTGAATGCAATGATGAGGATGGTAGGACCTTACATTAATATTTTCTTTTCCCCCTTTTAAAATATTCCATACATTTCGTGTGTATTCAGATCATATCTTCACCTTTCAAGCACAATATTAAAACTAATTTCATCCATTAGCTTAAGTTTTGTTTTTGGGTTAATTGGTGATTTAACATGGTATCAAATTCATGAGGTCCCGTGTTCAAACTCTTGCAATGTTGTTAGAGTGTAAATATAATACAATGTATTTCAACTTGATTTTGATGCAACATAGGAAGTCTAAGTATCCAAGTTATATCTTTAATATTAGCTTTGAACTACCATGAAATTATGACTGGTAGTATATAATATGGAAAAACTACCTCTATTCATTACTTGTCATAATAGTAGCATTTAAAAATGTTATAGAATCTAATATATCGTTTAATAATGTGTCAAAATGAGTGGATGAAGTACATATTACGGTAGTACTACAAAGTCCTCCCTTTTCTCAAGTTCAATCTTAACAATTTTAATAAGTTAAAGGAAAATCTTCCTCCGAATATCACCTAACATATGTTGTGACTTCAAGTTTTTCTTTAAAAAATTGAAGTTTCACTTTAAAGAAGCTTGTATTAAATTAATTCTAGCGGGAACTTGAATTGGAGTAAATGAAGTGGGATGACATTTAATGAAGTGGAAAGTCGACTTTATAAGTTTCATCTTTTATGGGACTCAATCTTTAGATTTGAACAATATTTCACTTAACATAACATGGAGTATTCTTTTCTTTCTAATGTAGCTTTGATTTTTAAGGTTTGTCCTTGATTATTCCTTTAATTAATATGTAAAACAAGCATTTATTTTTGCAAGATCTTAAGTATGGCTATTTAGACACATTTTGAGTGTTGTAAGGTACATTTGAAATTTGAGTTTTAAAAAGTTATCGATTCAAGGGGTCAAAGATTTTATCATTCTTGTAGTCTTGACATAATTTGCATCAAGTGATCAAAGAATATTTTGTAATCTTGTCATAGTTTGCATGTTCAAGCTCATTCAAGCAAGGACCTTATTTATCCTTATTTGTGATCTATGGAATGATTCAAACCTCCACGAAAAAATGGCCAAAAATACTTTGTTTGGATTAAAAAATTAAAATTAAAAATTAAAAAAAATAAAATTAAATTAAAAAAATAAATCTTATCCACACTTACATTATGTGCAACTACTAGATTAGTATTACTTATTCATTTTCCAGAGTTTGAATAAGAATTTAAAGTATGATGGTGTATAAGCTATAATTTCAAAAAATTCGATATGTGATGTGTAGAATTGCTACACATCCCCCATTCTTGTTACTAATGAATCTCTATTCCAAAACCAACACATTCCATCTTCACACTTATCAAATGAAAAATACCAATTTGGCAATATCCCTCCTCATAAACCGAAGTTTTTTTTTTTCTTATCTATTGTCATTGGTTTTTCTTTTTTTTTTTTTAAATTGCACAAACCACCCCTAGTAGGGTTTGTTACAATCACACTCATAAACTTTTAAATCTAGCAATTAAACCCTTGTAGTTTATTAAGTGTTGCAATCAAATCCTTGTATTAGTTGATTTTCAATTAAAAAAGGGCAAACTTGTCAATTCAATCAATCTTCCTCAACCTCTTTTGCCATGACTCGTTTTTGCTACCTTCATTTGTCTCTCACCCAATAATACCCATGTCCCCAAATTTCAAACTCATTTCCTCTTTTCACTTCAGCATCTCACCGTATTCCTCTTCTTTTCCATTTACAAGGAAACATTCCGTCAAGAGATACCAAAGGGACAATTGGTTGTACAAGAACCAGGACCAAACTTCTATTACTTCATCGGGTTCGATCTATTACGTATGATTTCGAGTCCATACGGCAGAATGACATTGCCTTGCAATTGTCGGAGCTCAAGAAATTGTTGCAAGTGCTGAGGGAAAAAAAGCTAAGTAGTGGAAAATGTGGGTCTGAGAATGTAATTTAA

mRNA sequence

ATGGTTCTAATTAACCTACAAGGACCCTACTTGAGTACTGTTGAATGCAATGATGAGGATGCATCTCACCGTATTCCTCTTCTTTTCCATTTACAAGGAAACATTCCGTCAAGAGATACCAAAGGGACAATTGGTTGTACAAGAACCAGGACCAAACTTCTATTACTTCATCGGGTTCGATCTATTACGTATGATTTCGAGTCCATACGGCAGAATGACATTGCCTTGCAATTGTCGGAGCTCAAGAAATTGTTGCAAGTGCTGAGGGAAAAAAAGCTAAGTAGTGGAAAATGTGGGTCTGAGAATGTAATTTAA

Coding sequence (CDS)

ATGGTTCTAATTAACCTACAAGGACCCTACTTGAGTACTGTTGAATGCAATGATGAGGATGCATCTCACCGTATTCCTCTTCTTTTCCATTTACAAGGAAACATTCCGTCAAGAGATACCAAAGGGACAATTGGTTGTACAAGAACCAGGACCAAACTTCTATTACTTCATCGGGTTCGATCTATTACGTATGATTTCGAGTCCATACGGCAGAATGACATTGCCTTGCAATTGTCGGAGCTCAAGAAATTGTTGCAAGTGCTGAGGGAAAAAAAGCTAAGTAGTGGAAAATGTGGGTCTGAGAATGTAATTTAA

Protein sequence

MVLINLQGPYLSTVECNDEDASHRIPLLFHLQGNIPSRDTKGTIGCTRTRTKLLLLHRVRSITYDFESIRQNDIALQLSELKKLLQVLREKKLSSGKCGSENVI
Homology
[Close]
BLAST of Cla97C08G155610.1 vs. NCBI nr
Match: XP_008461254.1 (PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-06
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSS----GKCGSENV 104
           SI YD ES+RQNDIA+QL ELKKLL+VLREK++SS    GKCG  NV
Sbjct: 75  SIPYDSESMRQNDIAMQLPELKKLLEVLREKRVSSGCDDGKCGPGNV 121

[Close]
BLAST of Cla97C08G155610.1 vs. NCBI nr
Match: XP_022991905.1 (uncharacterized protein LOC111488402 [Cucurbita maxima])

HSP 1 Score: 60.5 bits (145), Expect = 4.0e-06
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSS----GKCGSENV 104
           SI+ D ESIRQNDIALQL ELKKLLQVLREK+ SS    GKCG  NV
Sbjct: 71  SISCDSESIRQNDIALQLPELKKLLQVLREKRASSGCDDGKCGPGNV 117

[Close]
BLAST of Cla97C08G155610.1 vs. NCBI nr
Match: XP_022954326.1 (uncharacterized protein LOC111456604 [Cucurbita moschata])

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-06
Identity = 35/47 (74.47%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSS----GKCGSENV 104
           SI  D ESIRQNDIALQL ELKKLLQVLREK+ SS    GKCG  NV
Sbjct: 78  SIPSDSESIRQNDIALQLPELKKLLQVLREKRASSGGDDGKCGPGNV 124

[Close]
BLAST of Cla97C08G155610.1 vs. NCBI nr
Match: XP_023548332.1 (uncharacterized protein LOC111807000 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-06
Identity = 35/47 (74.47%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSS----GKCGSENV 104
           SI  D ESIRQNDIALQL ELKKLLQVLREK+ SS    GKCG  NV
Sbjct: 71  SIPSDSESIRQNDIALQLPELKKLLQVLREKRASSGCDDGKCGPGNV 117

[Close]
BLAST of Cla97C08G155610.1 vs. NCBI nr
Match: XP_021822573.1 (uncharacterized protein LOC110763988 [Prunus avium])

HSP 1 Score: 59.3 bits (142), Expect = 8.9e-06
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSSGKCGS 101
           S+  DF+SIRQNDIALQL EL+KLLQVLREK+ S G CGS
Sbjct: 71  SVPPDFDSIRQNDIALQLPELRKLLQVLREKRESEGGCGS 110

[Close]
BLAST of Cla97C08G155610.1 vs. TrEMBL
Match: tr|A0A1S3CDT8|A0A1S3CDT8_CUCME (uroporphyrinogen-III C-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103499894 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSS----GKCGSENV 104
           SI YD ES+RQNDIA+QL ELKKLL+VLREK++SS    GKCG  NV
Sbjct: 75  SIPYDSESMRQNDIAMQLPELKKLLEVLREKRVSSGCDDGKCGPGNV 121

[Close]
BLAST of Cla97C08G155610.1 vs. TrEMBL
Match: tr|A0A0A0KBI8|A0A0A0KBI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428980 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.7e-06
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSS----GKCGSENV 104
           SI YD ESIRQNDIA+QL ELKKLL+VLREK++S+    GKCG  +V
Sbjct: 75  SIPYDSESIRQNDIAMQLPELKKLLEVLREKRVSNGCDDGKCGPGDV 121

[Close]
BLAST of Cla97C08G155610.1 vs. TrEMBL
Match: tr|M5XJY8|M5XJY8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G005900 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-05
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSSGKCGS 101
           S+  DF+SIRQNDIALQL EL+KLLQVLR K+ S G CGS
Sbjct: 71  SVPPDFDSIRQNDIALQLPELRKLLQVLRGKRESEGGCGS 110

[Close]
BLAST of Cla97C08G155610.1 vs. TrEMBL
Match: tr|A0A251Q8Z3|A0A251Q8Z3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G005900 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-05
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSSGKCGS 101
           S+  DF+SIRQNDIALQL EL+KLLQVLR K+ S G CGS
Sbjct: 71  SVPPDFDSIRQNDIALQLPELRKLLQVLRGKRESEGGCGS 110

[Close]
BLAST of Cla97C08G155610.1 vs. TrEMBL
Match: tr|A0A251QC87|A0A251QC87_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G005900 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-05
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 61  SITYDFESIRQNDIALQLSELKKLLQVLREKKLSSGKCGS 101
           S+  DF+SIRQNDIALQL EL+KLLQVLR K+ S G CGS
Sbjct: 71  SVPPDFDSIRQNDIALQLPELRKLLQVLRGKRESEGGCGS 110

The following BLAST results are available for this feature:
BLAST of Cla97C08G155610.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461254.13.1e-0670.21PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis melo][more]
XP_022991905.14.0e-0674.47uncharacterized protein LOC111488402 [Cucurbita maxima][more]
XP_022954326.16.8e-0674.47uncharacterized protein LOC111456604 [Cucurbita moschata][more]
XP_023548332.16.8e-0674.47uncharacterized protein LOC111807000 [Cucurbita pepo subsp. pepo][more]
XP_021822573.18.9e-0675.00uncharacterized protein LOC110763988 [Prunus avium][more]
BLAST of Cla97C08G155610.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CDT8|A0A1S3CDT8_CUCME2.0e-0670.21uroporphyrinogen-III C-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103499894... [more]
tr|A0A0A0KBI8|A0A0A0KBI8_CUCSA7.7e-0668.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428980 PE=3 SV=1[more]
tr|M5XJY8|M5XJY8_PRUPE3.8e-0572.50Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G005900 PE=3 SV=1[more]
tr|A0A251Q8Z3|A0A251Q8Z3_PRUPE3.8e-0572.50Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G005900 PE=4 SV=1[more]
tr|A0A251QC87|A0A251QC87_PRUPE3.8e-0572.50Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G005900 PE=3 SV=1[more]
BLAST of Cla97C08G155610.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C08G155610.1 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C08G155610Cla97C08G155610gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C08G155610.1.CDS.2Cla97C08G155610.1.CDS.2CDS
Cla97C08G155610.1.CDS.1Cla97C08G155610.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C08G155610.1.exon.2Cla97C08G155610.1.exon.2exon
Cla97C08G155610.1.exon.1Cla97C08G155610.1.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C08G155610.1Cla97C08G155610.1-proteinpolypeptide