Cla97C08G145320.1 (mRNA) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C08G145320.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	RNA polymerase II transcription mediator
Location	Cla97Chr08 : 1820154 .. 1831425 (-)
Sequence length	1989

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAGCGGTCTAGAACGATTTCCATCGTATGTTCCTTCTTCCCGGGGTTTTCCCTCATTTTTTTGATTCCTGAGATAACAGAGGAAACATTATCTAGTTCGTATGTGTGTTAAGGTAGAAGAAGAAATGTCTTAGTTGATGAATGTCTGCTTGTCCTTCGACATTGTTAATTCTGATTACGTTTGTGTCTGTAAGTTGGCGATTGCTTGGAGTGAACTCACAATTGATCCCATTCTGCTAAATTGACCAGAATCTAATCTTTAAATGTGTTCCTTGATTTTTCCTGGTGAAAGTTTATGCTTAATTTCCTTGATTAATTGAGATTGATTGTGTTATATTGTTAACAGAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACTGTGAGTTTATATATCAAACGCCTCTAAGTTTCTAGATTTTTTTACCATACTGTTCTTTTTATAAATAATGGGAAAACGTTACTTGTATTAGTTTCAATCAATAAATGTGCCTGCAAATATTTCTTTGTTCTAAAGAAAAAAAGGTGCATGCAAATGTAGAGGCAAGTTGTTTTAGATTTTACATTACATATATGTCTTGGCATATTTTTATTTTTTTAGAAAGCGTGGTACTGAAGTGCAATAGTTCTTTCGGACTTAAGTGCAAGGTGCAGTAAAGAGAGGGGAAAAAAACAAGGTGCTCACTGGAAAATGCTAATAATTTTCTTTACACATGAAGTAAAATAGTATTATGAATATTAAGATAATGAAAAATTGAAATTAGAGGTTTTATTGGTGATTGTTGAAAAAAAACAAACATTATAAAAGAATATTTCTTAGTTTCTTCCTTCTATTGGGCTTCAGGCACTGAAGCGCGTATCTCAAGTGCCCTTCATTAAGGGTGCCTTTTCTGGTAAGTCCATGTAGGTGTAGTTTTCTAAACACAGTGTCTATGTGCAGAGGATTTGTGAACCTACAAACTGATCTTTAATTCTTATTAGCTTTATGGATATACAGCAACAATGTGTCTGACAAAATCATCTTGTTGACTTGAGTTTCCTTATCCTAAGCTCTCTGTAAATAATGACATTTACTTCATCTCTCTGTTAGGCCCCCAATTCACCTTACATACAAGAGGAGGGGCAATAAAGGGAATTCACAGGAGCAGAGGAAGGGAGAGCATGAGGGTTGTTATTTGGGGAAATGTGGGGACCATCTGTACAAGGGTTGGGGGGTTAAGTAGGGTTTTGGGTCTCCAGCTGAGGGTGTGGAATATTTTGAGGTTAAGCCTAGAGGGAGGAGAGAACCAGCACTCTGTAATTTGCTGGAAGTTATTTTGCTTGTTATTTCCTTTCGGTTTAGTATCTTCTTGTTGAGACCTAGGATTTATCTCCTTATTTGTGAATATATAATACAAAAATATCGTAATACCCTGTCTTTCTTGGTATCTTGTTGGGTATTGTTCTTGTTTGCAAGTGTGGATACCTAACAAATTGGTATCAGAGCTCGGTTCAACACTAAGGATCACAAGAAGAATGGCGTAGAAGATGACAAAAGAACGTTTTGAAGCTCAGGAAAAGGAGCTAGCAGTTCTGAAGGAACTAGTGGTGACTACCTGTCGTAATGTTGAGAGGATGTCGAGCAATTTAAGGGAGTTGTCAGATCGAGTGAGTAAGGGGCAGACACTGTTGACGGAGGCCTCATAGACGAAGAACAAGGAAGTCGAAATGGAAGAAGGTGAGTCCTCTCAAGCTAAGAACGGGGGATCGATCGGAGCAAATACAAAAAGTTGGAGATACTGATCTTTGACGGAGAAGGTCCGGATTTGTGGCTTTTCTGAGCAGAGACGTATTTCGAAATACACGAACTCTCCGATGTAGAGAAGATGAAGGTGTCGGTGATTAGCTTTTCTCAGGAGGTTATCGATTGGTATCACTGGACTCACAACAGGAGACCGATCAATACATGGAACGAGTTGAAAGAAAGAATGTTCGAACGGTGAAGACCCACGATAGAGGGGACTCTCACTAATCAGCTTATGACCATTAAGCAAGAAGGAACCTACGCTGATTATTGAAAGAAATTTGAAGTTTACTCAGCTCCACTTCCAAATATGGAGGAGAGCGTGTTGGTGACGGTGTTCTTCAATGGACTACGGCCGACATTGAAGGCAGTCGTGGTGAGTCAGTGGCCAATGGGCCATGATTAATGTATGTTGGAAGCCCAATCCATTGATGATAAAGATTTAGCCATGAAACTAGCCCTCAAGGAAGTGGGCCATAGTGGGCCAGATAAGAAAGGGGGGAGGCCCAAGGAATGGGAGGAAAATATTTGGGAACAGTGGAGCTGGTGCCCTAAATCAGCAAGTTACCGTTCTTGGGAAGGGAAACCCAAGTTGAAAGAAGGATCCACTGATGAGACGAATGTTCGATGCTGAATTCAAGGAGAAGAGGGACAAGGGATTATGCTTCCGTTGTGATGAGAGATATTTCCAAGGCCACCGTTGCAAAATAAAAGAAAAGAGAGAGCTGAATTTGATTATAGCAGGCGAAGAAGGCGATTGTGAAGAAATGAATTGCGAGGAGGAGGTACCGGAAGTGGAAACTAAGGCCTTAGAAGTGGCGGACAATGTAGAGTTGGCCTTAAGATCGATTTATGGATTTTTGGCTCCGAGAATGATGAAATTAAAAGGGATTGTGGTAGGAAACGAGATGATTGTACTCATCGATTGCGGGGCGACCCACAACTTCATACATCAGAGACTCGCAGAGGAACTTAAATTACAGGTGGTTGAAACTTCGAATTACAGGATTGTGGTCGGGAATGGAACAACGATCAAAGTCTAGGGAATTTGCCAATCAATAATAGTCATGTTACCGGAGATTACTGTTGAGGACTTCTTACCGTTGGACTTGGGAAAAATGGATGTTATACTCGAAATGGCGTGACTCTGTACCACGGGCTTCATGGGGGTGCATTGGCCGTCATTGACAATGACCTTCGCCTTCAGAGACAACCAAGTGATGTTAAGAGGGGATCCCTCACTGACGAAGGCAGAAGTTAGCCTAAAGGTAATGACTAAGACATGGGAGGCAGAGGACCAAGGATTTCTTATTGAGTTTCAGAATATGGAAATTGAAGAAGAGGAAGAAGGAAACTCAGAGGAAAGGAATCGAGAGATAGAACAGCTTTTGGTGATGATCCAAACCTTATTAGGACGCAACCAAGACATTTTTGAGCTTTTGAAGGTACTCCCACCTAAGAGAGAGGTTGATCATAAAATTGTCATGGCAGAGGGGCAACCACCTATCAAAGTACGACCATACAAATATGGGCACGCTCAGAAGGATGAAATTGAAAGATTGGTGTGAGAAATGTTAGCAACTGGGATCATACGACCAAGTAGTTCTTTCTCAAGTCCAGTATTATTGGTAAGGAAGAAAGATGGAGGTTGGAGGTTCTGCGTGGATTATCAAAAGATAAATCAGGCCATGATCACTGACAAATTTCCAATTCTCGTTATTGAAGAATTGTTGGATGAATTACACGGAGCAAGTGTGTTTTCAAACTTGGATCTGTGATCAGGATACCATCAGATCCGAATGGATGGACGAGACATTCCCAAGACAGCTTTTGAACCCATGAGGGTCATTCCAAGTTCTTAGTCATGTCATTTGGGTTGATCAATGCCCTGCCAACGTTTTCGTCACGGAAGCTATGGTGTTGACAGTCTCGACACTAGTCGATATTGAGGTAGTTCAGCAAGAAGTGGAAAAGGATGAGTCATTGCAGAAAATCATTGAAAGACTTAAGGAAGGATCCAGATTCAGTACCTAAATTCTCACTTAACCATGGAAAGCTATTATACAAAATCCGGTTAGTCATATCTCACACTTCTTCCTTGATTCTTGCACTTTTGAGTACATTCCATGATTCAGGGATAGGAGGGTGCAAAGGTAGGGCTACCTTCACACCTATAAACGAATGACGGGGGAGTTGTATTGAAAGGGATGAAGAAAGACGTTAAAAAATATGTTGAGAGTTTCATCATCTGTCAAAAGAATAAAGTGGATTCAATTACCCTAGTAGGGCTATTACAACCGCTACCAGTACCAGATAGAGTTTGGGGAGACATCACCATGGATTTCGTGGAAGGATTGCCGAAATCTCAAGGGAAGGATGCGATTATGGTAGTGGTTGATAGGCTCAGCAAATATGGACACTTTGTGTCATTGAGCCATCCTTACAACGCCAAGCTAGTTGCCATTATGTTCATTCGAGAAGTGGTGAAACTTCATGGGTTCCTGAAGTCAATCATATCGGATTGAGATAAAATCTTCCTTAGTAACTTCTGGATTGAGTTATTTAAGAGTCAAGGAACTGTCCTGAAGAGGAGTACTGCCTTTCATCCACAGACCGACGGACAAACTGAACGGGTTAATAGGTGTTTGGAAACATACCTTCGGTGCTTTTGTAATGAACAGCCTAAGGCTTGATATGACGGGTTACCATGGGCGGAATATTGGTATAATACAACATACCATGTCTCAACCAACACCACTCCTTATAATATTGTGTATGGAATTGCAATGCCTCCTCTGATATCTTACGGGGAAACAAGGTGTCTAATGACACGGTAGAGCAACAACTAATGGCACGAGACAAGGGTTTGGTGGCTCTTAAGGAGCATCTGACCCTGGCACAGAATCGAATGAAGAAATTTTACGACATGAAATGGCGGGCAGTTGAATTTGAGGTTGGAATTGAAGTCTTTTTGAAACTAAGACCCTACAGACAATGAACACTAGCAAAGAAACATTGTGAGAAGCTATCTCTGAGGTTTTATGGACCTTATCCTGTGTTGGAAAGGATCGGGGAGGTAGCCTCTACCTTCTTCAAGTTCCACATGAGGCAACCATTCACAATGTTTTCCATGTTTCCCAATTGAAGAAGAAGGTGGGGGAGAGGTAGACGGTCCAAGTACACTCCCCTCAATTTTCGGAAGAATTTGAGTTGCAGGTCCGACCAAAAAATATACTCAGCGTCAGATGGAACTTGGAACTGAGTAGAGAGGAATGGCTGATCACATGGGAGAAGCTGCCAGAAAGTGAAGTGACTTGGTAAGAGGCTGCTTTCATCAAGTATTAATTTTCAAAATTACACCTTGAGGACAAGGTGCATCTAGAGACCAGGGGTATTGTTAGGCCCCCAATTCACCATACATACCAGAGGAGGGGCAAGAAAGGGAATTCACAGGAGCATGAGGGTCGTTATTTGGGGAAATGTGGGGACCATCCGTCCAGGGGTCATAGGGGTTAAGTAGGGTTTTGGGTCTCTAGCTGGGGGTGTGGTATATTTTGGGGTTAAGCCTAGAGGGAGGAGAGAACCAGCACTCTGTATATTTTTTATGCTTTATTTTCTTTTTCATTCTTTCTCGCAAGAATTGGTTGGGAGAACTGGGTTCTGTCAGGTTCATTAGGGAGGAGATAGGATTAAACTGCTAATTGTCAGGATCTAGAAATTGTGATATTTTTTCTCTGCTTGTTGTACTAGATTAGTTTTAATAAACTGGTATCTTGAGAATATTCTTTTTAGAAATATGGTGCCATTACAAATATTGTCTTTGTCTTGATATGACTGTAGGTGGAAGCTAATGATGCAGTAACAGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTCAGATCTTGGAGTGTCTGTCGCAACGAAATTACAATGCTTTCGAGTACTATTTTTATCCTTCTTTTGTTTTCAGAAGTGATGCTTGGCTTTTACGCCCTTATTGTCTTATCTGATTAGCTTACTTTGATTGGGCTGGCACGACCATGTTGTAAAGATTAATTACCAGTATTATTCAATTCAAATTTGATCTTATTATTTGTACTATCATTTTGAAAGTGCCTGATTTTATCATTTACACCTTTCTTTCTACAGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGGTAATCAATTCTCTTCATTTATCCAACGAATCATTGTGCAATTAATGTATACTCAAAATTGTATGTCATTGTGAATCTGGCAGTGCGTAGACAGTAATATTCTTTAGAATCCATGAAGTGTCCTTGAATTAAAAAGTTTTTATCATAAAATATAAATATGCTTTGATTTTTATTCACATGTGTTTATCAATTTAGATAAAATAGAAGTTTTTGTTAAGAAAACTTAGGAGGCATTTGGGGTGCTGAGTTGGTTATTATAGTTAGTAGTTATTATAGTTAATGGATTATAATAGTCTGTGGATTATAATAGTTTCTGTTTGGTGTGTAAACTATTTTAGTCTAAGTTATAATAGTTTGTGGTTGGGGTGCAAATTGTTTTGTTTGGATAGAAAATAGTAAACGCTGTAGCAAAAAAGAAAAGAAAGGATGAGTGGAAAATAGTTAATATTGTAGCAAAGAGGGTTTTGAAATAATATTTACTATACTTAATTGTAGGTTATAAATAGTTGTAAACACCACTATTATATTGGGTACCCCAAACATGCAGTGGGCTATAACAACCCACTCACCAACTTCTTGTTGGTGCCCCAAACTCCTTAGTTTATGCCCCCATATGTTATACTATTTGTTTATTTATTTTAGGAAATGTAACTTTCATTGAAGGGCATTCAAAGAAGAAGCCCACAAAGGAATTCCATCACTAACTACAAGAAATAATTCCAATTTAAAAGAACTAAACCAAGCTGATAATAATTACAAAAAGTTGATGGATGAACACCCATAATGAAGCATTAAAAGTGACAACCTCCCAAACCCCTCCTCCCAAGATCTCTCCACTCCTATAAAAATCATACTTTTGCTCTCTAGTCAAAATACCTACAGAACAGCATAAAAACAAGCATGCCACATGACTTTCTCTTATCTAAGAAAGAAGAGTTCGGGAGCACCTTCTTAATCATAGAGCAAGAATTTTTTCTTTGAACTTTGCGAAGAACAAAAGAACTCAAGCACCGACTCCAGAGAGCGTAAACAAATTGGCAAGCCAACAATAAATGATTGTTGTCCTCTTGCTGCCAACAAAAAACACATGGTTGCGGATGCAACATAAAAGAATGATGTCTATGAATACAATCCGGGGTGTTAACTCTCCCATGCATCACCAACTAAGCAAAGAACTTCACTTTTTCGGGAATTTTAATCTTCTGAAGAGTGTAGAAAGCATAGGCAACTTGTGGGAGGAGGAAGTGAAACGCACAATGGGAAAAAATTATCTACAAGAAAATTCCTAAGAAGGATTAGGGCCCAAACCTGAAAGTTGGAGGAGTTCCTCTTCCTCCTAGGACATGCAAGGACGATAAAAGAAGGGAAAATGCCTAAGAAGGGTCGGTCTGGAATGATAGAACGAAGGTTTGCCACTTTTGTTGCCTCTTGGAAAGGATGACGAAAACCCAAAAGGAAGGGGAGAGCTCAGATAGTCAAAATGGAGGCCATTGAGCACATACTCTAATTGGACAGCTAATGTAAATGTGGAAAGTTGGAAACAGAGAACAAAAGACCCTGCAACATGCAACCCACTACTCAAAAGGGTGCAGACCATACCTATGCACAATAGTCCTATACCACAAAGAGATAGGCTCCATGAAGCCTCATATGTTATACTAACAGATTCATCGTATAAATTATCCAATCTAGGTATTAATTGCCACAATGAAATCTATATTTGCGTTCAGGGCATAACTGCAAAGTTGTCCTTTTCAGATCATAAGGTGGATAGCAGCAAAAAAAGATGGTAATTTTCTTAAGGGCATGAAAGTAACCCTTATTCAATCAGTTCTTTCCAATAATTGTCGTGTTCTTTTTGCCATAACCGAAAAGCTCATGAGAGACTTCTCATGGATGGGTGTGTGAGCAGTGAGCACTGAGAATGAGTCTTTTCATCTAAGTGGAGCATGGTGTTGTGTTTGTATGAGAGTGGCAGATTGGGAATCGGTAATGGCTGACCAATAACCTTGCTCTAATTAAGTGGCTTTGAACTCTGGAGGTTCTGTTGGTAGCAATCTACTTTAGTGCATAAGATTATTGCAATTAGATTTGGGGTTTAATCAACTAGTGGATTCCCATCTAGGCTTCATTAATCTCGCACCGTGGTTCTAGAAGGCCATTTCCATTGCATAGGCTTCTGTTTTTAGTTGTTGAGCTTCTTCACAAACTCAAAAGGGTAAGATTGTAGATAAAGATAATCAGTTTACTTTTCACTAAATCGATTGCTTCCTTGAAGGAGGTGATTTTCTACGTTGTGTGGGCTTGTGAAAGTTAGATTATTGGCCAGTTGGGACTCTTGTCATATTGTGTTTGAATGTAGTAGGGGATCTTTTAAGTTATATTGCTTCTTAACTGAGGCTGCTTTCAGTATAATTCCACTTGAGGCTTCCAGCTTGCCAATTCATTATCAGGCATATACCTTAATATTTTTTTATAATTGGAAGTTTTTTTCCTTTAATTTTGTGGGGATGGTGGCTTGAGAGTAGTAGAATTTTTAGACAGGTTGAGAGATCTTCAGAAGAGGTGTGGAGGTTGTGAGGTTTAATGCTTCTTTATGTGCGTCTGTTAATAAGCGTTTTAATTCCCATTTTGTGGGGTTTTTTTTTTTTTTTTTTTTTTGTATGTCTTTGTGCATTACTGACTCCGCTTAAGAAAATAAAACTGTAAGGGTGGTTGCTCCAGTTTTCCCTTTGTATAGCTTTTGTTTAGCCTGCTAACATTGTTTTTTATGGTGCTTCTTCCTAGCCCCCTGCCACTTTATAAGTTGCACCTTCTCATATTATTTTTTAAATTTTTTTTTTTCATGGTTCCTTCTTTTCCTCTTTCTTTTTCTAATAACATCTCGTTCCTTATTAAAAATAAAACAACCTTTGGATTTTCTGAGGTTTAGCCTTCTTAATATCATGAGCTTGTTTTTTAATTCTTTCATATTGTTTCGTTTAAAAAAGTAAAATTTCCACCATTTGAATTTAGTATCTTTTTTACTTTTGGGTTTAACTTATTTAGCATCGAATGATCCATAAATACAAGTATATATTAATGTATTATAGTGCAATTTATATAGAAACAATTGGAAACCTTTTGATGCTCTTAATGCTTTCCAATCTTCATATATTTTCAGTATTTGCTGATGATGTATATCAGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGTCATTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTAGTTTCTTTAATACTTTGATCTTGCTCATTATAAGTCCTTGCTACTTTTGTTCCCCACCACATGATACACCATTGTTTTTTCCTGGTTCCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAACAGTTGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGAGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTATAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTAAAGTCCTAATTTCTTAATAACTCAATTTCCAATGAAAGCACACTGCTTCATAATTTTTTAAGGAAAAAAAAACTACAATAATTATGATTTATGTATTTGGTGTTACCAGCATATTAATCTTGTAGATCTTTGGTTTGTTCTTAGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTCTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATCCATTCAATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTGAGTTCATAGTAGATTTCCATGCTTTCAAGCTTCTTTATCAGTGGAAAGTAACAGTAATAGTATCCTTGTGTTTACATAACAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAGTGGAGTTGGTGGTAGCTTATAA

mRNA sequence

ATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAGCGGTCTAGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACTGTGGAAGCTAATGATGCAGTAACAGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTCAGATCTTGGAGTGTCTGTCGCAACGAAATTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGTCATTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAACAGTTGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGAGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTATAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTCTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATCCATTCAATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAGTGGAGTTGGTGGTAGCTTATAA

Coding sequence (CDS)

ATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAGCGGTCTAGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACTGTGGAAGCTAATGATGCAGTAACAGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTCAGATCTTGGAGTGTCTGTCGCAACGAAATTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGTCATTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAACAGTTGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGAGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTATAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTCTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATCCATTCAATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAGTGGAGTTGGTGGTAGCTTATAA

Protein sequence

MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

Homology

[Close]

BLAST of Cla97C08G145320.1 vs. NCBI nr
Match: XP_004141551.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >XP_011656092.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >XP_011656093.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >KGN52676.1 hypothetical protein Csa_5G650410 [Cucumis sativus])

HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 633/662 (95.62%), Postives = 649/662 (98.04%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MDEDMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           XXXXXXXXTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  XXXXXXXXTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPL+R KNESTN SNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Sbjct: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ  QTVEG N+ IL+NA+LPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360

Query: 361 EIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSG 420
            IELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEVPWSILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480

Query: 481 NSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
           NSI+ARTSD +QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY 
Sbjct: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 663
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Cla97C08G145320.1 vs. NCBI nr
Match: XP_008459609.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo] >XP_016902444.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo] >XP_016902445.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo])

HSP 1 Score: 1230.3 bits (3182), Expect = 0.0e+00
Identity = 627/662 (94.71%), Postives = 645/662 (97.43%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEK XXXXXX
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDXXXXXX 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPL+  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360

Query: 361 EIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSG 420
            IELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEVP SILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480

Query: 481 NSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
           NSIQARTSDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY 
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 663
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Cla97C08G145320.1 vs. NCBI nr
Match: XP_022987637.1 (mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima])

HSP 1 Score: 1194.5 bits (3089), Expect = 0.0e+00
Identity = 609/662 (91.99%), Postives = 629/662 (95.02%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MD DMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEK XXXXXX
Sbjct: 1   MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDXXXXXX 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           XXXX    TPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS
Sbjct: 61  XXXXKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+
Sbjct: 181 ANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAISLPPNTCHSLCFGFLSGCNM 240

Query: 241 ENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPL+RGKNESTNSSNQS +  EKEFTNDDEYIKETNSLLRQVHHAIFSEQVFD VNREA
Sbjct: 241 ENPLERGKNESTNSSNQSPIESEKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDFVNREA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLD 360
           FNPSLGINVTGIRENYLQLSIDQGTSVFISLVP+GQ CQTVE  NTGILDN NLPFDSLD
Sbjct: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSCQTVEDANTGILDNTNLPFDSLD 360

Query: 361 EIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSG 420
            IELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVF+KSND+PISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSNDKPISSLSRQSGQPSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHP 480
           LLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEVP S LHP
Sbjct: 421 LLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHP 480

Query: 481 NSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
            SIQARTSDSH+MN+VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYG
Sbjct: 481 PSIQARTSDSHKMNSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYG 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
            QGCLSWWLVMDDGLMEDRK NF+ SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG GG
Sbjct: 601 AQGCLSWWLVMDDGLMEDRKHNFNISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGG 660

Query: 661 SL 663
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Cla97C08G145320.1 vs. NCBI nr
Match: XP_023516123.1 (mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 610/662 (92.15%), Postives = 628/662 (94.86%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MD DMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEK XXXXXX
Sbjct: 1   MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDXXXXXX 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           XXXX    TPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS
Sbjct: 61  XXXXKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPNSCHSLRFGFLSGCN+
Sbjct: 181 ANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNM 240

Query: 241 ENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPL+RGKNESTNSSNQS +  EKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
Sbjct: 241 ENPLERGKNESTNSSNQSPIESEKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLD 360
           FNPSLGINVTGIRENYLQLSIDQGTSVFISLVP+GQ CQTVE  N GILDN NLPFDSLD
Sbjct: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSCQTVEDANAGILDNTNLPFDSLD 360

Query: 361 EIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSG 420
            IELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVF++SND+PISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFLRSNDKPISSLSRQSGQPSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHP 480
           LLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEVP S LHP
Sbjct: 421 LLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHP 480

Query: 481 NSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
             IQARTSDSHQM +VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYG
Sbjct: 481 -PIQARTSDSHQMKSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYG 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
            QGCLSWWLVMDDGLMEDRK NFD SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG GG
Sbjct: 601 AQGCLSWWLVMDDGLMEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGG 660

Query: 661 SL 663
           SL
Sbjct: 661 SL 661

[Close]

BLAST of Cla97C08G145320.1 vs. NCBI nr
Match: XP_022961046.1 (mediator of RNA polymerase II transcription subunit 17-like [Cucurbita moschata])

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 605/662 (91.39%), Postives = 623/662 (94.11%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MD DMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEK XXXXXX
Sbjct: 1   MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDXXXXXX 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           XXXX    TPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTV GMTRPKPLPNEVLS
Sbjct: 61  XXXXKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVGGMTRPKPLPNEVLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA AP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPNSCHSLRFGFLSGCN+
Sbjct: 181 ANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNM 240

Query: 241 ENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPL+RGKN STNSSNQS +  EKEFTND+EYIKETNSLLRQVHHAIFSEQVFDLVNREA
Sbjct: 241 ENPLERGKNSSTNSSNQSPIESEKEFTNDNEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLD 360
           FNPSLGINVTGIRENYLQLSIDQGTSVFISLVP+GQ  QTVE  NT ILDN NLPFDSLD
Sbjct: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTWILDNTNLPFDSLD 360

Query: 361 EIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSG 420
            IELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVF+KSND+PISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSNDKPISSLSRQSGQPSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHP 480
           LLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEVP S LHP
Sbjct: 421 LLGHFCLSLAHRIFANKVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPQSKLHP 480

Query: 481 NSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
            SIQARTSDSHQM +VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYG
Sbjct: 481 PSIQARTSDSHQMKSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYG 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
            QGCLSWWLVMDDGL EDRK NFD SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG G 
Sbjct: 601 AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGS 660

Query: 661 SL 663
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Cla97C08G145320.1 vs. TrEMBL
Match: tr|A0A0A0KXX2|A0A0A0KXX2_CUCSA (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=3659 GN=MED17 PE=3 SV=1)

HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 633/662 (95.62%), Postives = 649/662 (98.04%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MDEDMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           XXXXXXXXTPWQWQ+MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  XXXXXXXXTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPL+R KNESTN SNQSS+NREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Sbjct: 241 ENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ  QTVEG N+ IL+NA+LPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLD 360

Query: 361 EIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSG 420
            IELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEVPWSILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHP 480

Query: 481 NSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
           NSI+ARTSD +QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY 
Sbjct: 481 NSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 663
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Cla97C08G145320.1 vs. TrEMBL
Match: tr|A0A1S4E2I2|A0A1S4E2I2_CUCME (mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 GN=LOC103498687 PE=4 SV=1)

HSP 1 Score: 1230.3 bits (3182), Expect = 0.0e+00
Identity = 627/662 (94.71%), Postives = 645/662 (97.43%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEK XXXXXX
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDXXXXXX 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL+
Sbjct: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLA 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP
Sbjct: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240
           ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV
Sbjct: 181 ANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNV 240

Query: 241 ENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA 300
           ENPL+  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Sbjct: 241 ENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA 300

Query: 301 FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLD 360
           FNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLD
Sbjct: 301 FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLD 360

Query: 361 EIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSG 420
            IELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSG
Sbjct: 361 GIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG 420

Query: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHP 480
           LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEVP SILHP
Sbjct: 421 LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP 480

Query: 481 NSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYG 540
           NSIQARTSDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY 
Sbjct: 481 NSIQARTSDSYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYS 540

Query: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600
           CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Sbjct: 541 CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED 600

Query: 601 PQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGG 660
           PQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGG
Sbjct: 601 PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGG 660

Query: 661 SL 663
           SL
Sbjct: 661 SL 662

[Close]

BLAST of Cla97C08G145320.1 vs. TrEMBL
Match: tr|A0A2I4HNZ5|A0A2I4HNZ5_9ROSI (Mediator of RNA polymerase II transcription subunit 17 OS=Juglans regia OX=51240 GN=LOC109019939 PE=3 SV=1)

HSP 1 Score: 929.5 bits (2401), Expect = 4.3e-267
Identity = 487/662 (73.56%), Postives = 560/662 (84.59%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MD +++VSLDKLPVKRL++IEE+G+ERFP DVGY+E RLSLIRRIDFAWA+EK   XXXX
Sbjct: 1   MDGNLEVSLDKLPVKRLDSIEENGVERFPPDVGYDETRLSLIRRIDFAWAVEK-DDXXXX 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           XXXXXXXXTPWQWQ+M+ENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNE+LS
Sbjct: 61  XXXXXXXXTPWQWQSMVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNELLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DL  S ATKLQCFRHLGKYFKQSA  L++QVAREARFYGALIRLQQNWKVKRQR AA AP
Sbjct: 121 DLSASAATKLQCFRHLGKYFKQSANALDQQVAREARFYGALIRLQQNWKVKRQRGAASAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCN 240
            +EGFTIDLFDNS  DP++VFRPSS STIRVDHDS+GML+INLPP SCHSL+F FL G +
Sbjct: 181 GSEGFTIDLFDNSLYDPAAVFRPSSLSTIRVDHDSAGMLSINLPPKSCHSLQFSFLGGHS 240

Query: 241 VENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNRE 300
            E+  +  K ++ +S +  S   EKE  +DDE +KET+SLLR+ H AIF EQVFDLVNRE
Sbjct: 241 GESLQEPYKTKTYSSVDYRSRESEKESMSDDECVKETHSLLRETHQAIFDEQVFDLVNRE 300

Query: 301 AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSL 360
           AFNPSLG+NVTGIRENYLQLSI QGTSVFISLVPSGQ  QT E + +  L+NA LP DSL
Sbjct: 301 AFNPSLGVNVTGIRENYLQLSIGQGTSVFISLVPSGQGDQTAESLGSQNLENAILPLDSL 360

Query: 361 DEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGS 420
           + ++LP+      KK   PNHI++EIYLQQIFHE + +K+ ++P+ + S+ SGQG+ DGS
Sbjct: 361 EGVKLPEEEHDTPKKWGFPNHISYEIYLQQIFHEHILVKAKEKPVFTRSQVSGQGAKDGS 420

Query: 421 GLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILH 480
            LLGHFCLSLAHR+F+N VLMELENVV +VP+LQLISHPTW+SR SSWT  M+VP SILH
Sbjct: 421 SLLGHFCLSLAHRIFSNKVLMELENVVCRVPYLQLISHPTWHSRTSSWTVFMKVPQSILH 480

Query: 481 PNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRY 540
               QARTS++ ++ NV K+QF TKVVVNDDCI IEGEGAPNV+GLF GNS++I SMNRY
Sbjct: 481 A-GCQARTSNNPRVKNVIKSQFRTKVVVNDDCINIEGEGAPNVLGLFKGNSEEISSMNRY 540

Query: 541 GCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE 600
            CDLADLPV IL QVASQ+I WLHEEAL+ GIKANRDFL LSFELEQGE + LVAHVDPE
Sbjct: 541 DCDLADLPVTILQQVASQVIGWLHEEALSVGIKANRDFLCLSFELEQGEIVSLVAHVDPE 600

Query: 601 DPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVG 660
           D QGC+SWWLVM+DG  E+RKL+ D SD   EYRKFLGHLSL+VL+STLMDLVSLCSG G
Sbjct: 601 DNQGCISWWLVMEDGFAEERKLHMDGSDGASEYRKFLGHLSLDVLYSTLMDLVSLCSG-G 659

Query: 661 GS 662
           GS
Sbjct: 661 GS 659

[Close]

BLAST of Cla97C08G145320.1 vs. TrEMBL
Match: tr|A0A2P4MHG2|A0A2P4MHG2_QUESU (Mediator of rna polymerase ii transcription subunit 17 OS=Quercus suber OX=58331 GN=CFP56_17231 PE=4 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 3.6e-258
Identity = 469/664 (70.63%), Postives = 539/664 (81.17%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MD  ++VSLD+LPVKRL+AIEE+GLE FP DVGY EKRLSLIRR+DFAWAIEK       
Sbjct: 1   MDGKLEVSLDRLPVKRLDAIEENGLEHFPPDVGYNEKRLSLIRRVDFAWAIEK-DDNKKQ 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
                    PWQWQ M+ENLQLAHQELS+IIDLINTVEANDAVTVAGMTRPKPLPNEVLS
Sbjct: 61  KKSSKESSKPWQWQGMVENLQLAHQELSIIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DL VS ATKLQCFRHLGKYFKQSAK LE+QVAREARFYGALIRLQQNWKVKRQR AA AP
Sbjct: 121 DLSVSAATKLQCFRHLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKVKRQRGAASAP 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCN 240
            +EGFTIDLFDNS  DP++VFRPSS ST+ VDHDS+GML+INLPPNS  SL+FGF SG +
Sbjct: 181 GSEGFTIDLFDNSLYDPAAVFRPSSLSTVHVDHDSAGMLSINLPPNSYRSLQFGF-SGPH 240

Query: 241 VENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNRE 300
            ++ L       T+S+ +S    EKE  +DDE +KET+SLLR+VH AIF EQVFDLV+RE
Sbjct: 241 TDDSLREPFKMKTSSTRES----EKESVSDDECVKETHSLLREVHQAIFDEQVFDLVSRE 300

Query: 301 AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSL 360
           AFNPSLG+NVTGI+ENYLQ+SI QGTSVFIS+ PS Q  QTVE   T  LDNA LP D+L
Sbjct: 301 AFNPSLGVNVTGIQENYLQMSIGQGTSVFISITPSSQGDQTVESSGTQNLDNAILPLDTL 360

Query: 361 DEIELP-DRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDG 420
           D + LP +  D  ++K   PN +++EIYLQQIFHE VF+++ DRPI + +R SGQG+ DG
Sbjct: 361 DGVMLPEEEQDTPKQKWGLPNRVSYEIYLQQIFHEHVFLRAKDRPIYAGNRISGQGAKDG 420

Query: 421 SGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSIL 480
            GLL HFC+SL+HR+F+N VLMEL+NVV +VP+LQLISHPTW+SR SSWT  M+VP SIL
Sbjct: 421 CGLLVHFCMSLSHRIFSNKVLMELDNVVCRVPYLQLISHPTWHSRTSSWTLFMKVPQSIL 480

Query: 481 HPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNR 540
               + A TS++H++ NV K QF TKVVVNDDCI +EGEGAPNVVGLF GNS++I SMNR
Sbjct: 481 RAGCL-AHTSNNHRVKNVIKCQFQTKVVVNDDCINVEGEGAPNVVGLFKGNSEEISSMNR 540

Query: 541 YGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDP 600
           Y CDLADL VIIL QVASQII WLHEEAL  GIK NRDFL LSFELEQGETL LVAHVDP
Sbjct: 541 YNCDLADLSVIILQQVASQIIGWLHEEALLVGIKVNRDFLCLSFELEQGETLSLVAHVDP 600

Query: 601 EDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGV 660
           ED +GC+SWWLVMDD   E+R+L+ D SD   EY+KFLGHLSL+VL+STLMDLVSLC G 
Sbjct: 601 EDTRGCISWWLVMDDSFNEERELHIDISDGASEYKKFLGHLSLDVLYSTLMDLVSLCCG- 656

Query: 661 GGSL 663
           GGSL
Sbjct: 661 GGSL 656

[Close]

BLAST of Cla97C08G145320.1 vs. TrEMBL
Match: tr|M5VWL4|M5VWL4_PRUPE (Mediator of RNA polymerase II transcription subunit 17 OS=Prunus persica OX=3760 GN=MED17 PE=3 SV=1)

HSP 1 Score: 879.8 bits (2272), Expect = 3.9e-252
Identity = 458/661 (69.29%), Postives = 531/661 (80.33%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MD  M++SLDKLP+KRL+ IEE+GLERFP DVGYEEKR SLIRRIDFAWA+EK       
Sbjct: 1   MDGKMEISLDKLPIKRLDVIEENGLERFPPDVGYEEKRQSLIRRIDFAWAVEKDENKKQK 60

Query: 61  XXXXXXXXTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLS 120
           X       T WQWQ+M+ENLQLAHQELSVIIDLINTVE NDAVTVA MTRPKP  +EV+S
Sbjct: 61  XSSKESAATQWQWQSMVENLQLAHQELSVIIDLINTVETNDAVTVASMTRPKPFHDEVMS 120

Query: 121 DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAP 180
           DL VS ATKLQCFRHLGKYFKQSAK LERQVAREARFYGALIRLQQNWKVKRQRVAA A 
Sbjct: 121 DLAVSAATKLQCFRHLGKYFKQSAKALERQVAREARFYGALIRLQQNWKVKRQRVAASAS 180

Query: 181 ANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCN 240
            NEGFTIDLFD+S  DP+++FRPSS ST+RVDHDS+GMLAINLPPNS  SL+FGFL    
Sbjct: 181 GNEGFTIDLFDSSLYDPAAIFRPSSLSTVRVDHDSAGMLAINLPPNSYRSLQFGFLGADP 240

Query: 241 VENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNRE 300
             +P+     ES+ +  + S   EKE  +DDE +KET+SLLR+VH AIF EQVFDLVNRE
Sbjct: 241 GVSPI-----ESSQTKIRLSSEAEKESVSDDECVKETHSLLREVHQAIFDEQVFDLVNRE 300

Query: 301 AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSL 360
           AFN SLG+NVTGI+ENYLQL+I QGTSVFISLVPS    QTV+  +T  L+N  LP D+L
Sbjct: 301 AFNQSLGVNVTGIQENYLQLNIGQGTSVFISLVPSRGE-QTVDSPSTQNLENTILPLDTL 360

Query: 361 DEIEL-PDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDG 420
           D +EL  D+ D ++K    P+ I+ EIYLQQIFH+ VF+K+ DRP S+ +R SGQ + +G
Sbjct: 361 DGLELAEDKPDTVKKTSLIPDQISCEIYLQQIFHQHVFVKAKDRPTSAGARVSGQLAKEG 420

Query: 421 SGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSIL 480
            GLLGHFC+SLAHR+F+N VL ELENVV  VP+LQL+SHPTW+SR SSW   +++P SIL
Sbjct: 421 PGLLGHFCMSLAHRIFSNKVLKELENVVKGVPYLQLLSHPTWHSRTSSWMLFVKIPESIL 480

Query: 481 HPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNR 540
           H  + Q RTSD   M N+TK+QF TKVVV DDCI +EGEGAPNVVGLF GNS++I  MNR
Sbjct: 481 H--ACQTRTSDMRHMRNITKSQFHTKVVVTDDCINVEGEGAPNVVGLFKGNSEEICLMNR 540

Query: 541 YGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDP 600
           Y CDLADLPVIIL QVASQ+I WLHEEAL  GIKANRDFL LSFEL+ GETL LVAHVDP
Sbjct: 541 YDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLCLSFELDLGETLSLVAHVDP 600

Query: 601 EDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGV 660
           ED +GC+SWWLV++ G +E+RKL+ D+SD   E RKFLGHLSLEVL+STLMDLVSLC+G 
Sbjct: 601 EDGEGCISWWLVINGGFVEERKLSMDASDGASESRKFLGHLSLEVLYSTLMDLVSLCTGR 653

[Close]

BLAST of Cla97C08G145320.1 vs. Swiss-Prot
Match: sp|F4K460|MED17_ARATH (Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana OX=3702 GN=MED17 PE=1 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 2.4e-204
Identity = 388/659 (58.88%), Postives = 500/659 (75.87%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MD DM++SLD+LP+KRLE+IEE+G ERFPSDV Y++KR+SLIRRIDFAWA+E+XXXXXXX
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEXXXXXXX 60

Query: 61  XXXXXXXXT--PWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 120
           XXXXXXX +   W+W+ M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPKP+PNE+
Sbjct: 61  XXXXXXXDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEI 120

Query: 121 LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAP 180
           LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A 
Sbjct: 121 LSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLAS 180

Query: 181 APANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSG 240
             +NEGFTIDL D+S  DP+S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++  
Sbjct: 181 NASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGL 240

Query: 241 CNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN 300
             + N  +  ++  + + +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Sbjct: 241 NPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLN 300

Query: 301 REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFD 360
           REAFN  +G N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +
Sbjct: 301 REAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS------ESATLLIE 360

Query: 361 SLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND 420
           S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F K+ D+  S   R S Q   D
Sbjct: 361 SSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKD 420

Query: 421 -GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWS 480
             SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT  M VP S
Sbjct: 421 SNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPS 480

Query: 481 ILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSM 540
           I+     + ++ D  +     KTQF TKVVV DDCI++E E  PNVVGL   +S ++ S+
Sbjct: 481 IIPQGRSETQSPDGKRN---LKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSI 540

Query: 541 NRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV 600
           N+Y CD+ADLPV+IL QVASQI+ WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Sbjct: 541 NKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHV 600

Query: 601 DPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC 656
           +PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Sbjct: 601 NPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643

[Close]

BLAST of Cla97C08G145320.1 vs. TAIR10
Match: AT5G20170.1 (RNA polymerase II transcription mediators)

HSP 1 Score: 713.4 bits (1840), Expect = 1.3e-205
Identity = 388/659 (58.88%), Postives = 500/659 (75.87%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKXXXXXXX 60
           MD DM++SLD+LP+KRLE+IEE+G ERFPSDV Y++KR+SLIRRIDFAWA+E+XXXXXXX
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEXXXXXXX 60

Query: 61  XXXXXXXXT--PWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEV 120
           XXXXXXX +   W+W+ M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPKP+PNE+
Sbjct: 61  XXXXXXXDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEI 120

Query: 121 LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAP 180
           LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A 
Sbjct: 121 LSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLAS 180

Query: 181 APANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSG 240
             +NEGFTIDL D+S  DP+S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++  
Sbjct: 181 NASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGL 240

Query: 241 CNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN 300
             + N  +  ++  + + +      EK   +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Sbjct: 241 NPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLN 300

Query: 301 REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFD 360
           REAFN  +G N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +
Sbjct: 301 REAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS------ESATLLIE 360

Query: 361 SLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND 420
           S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F K+ D+  S   R S Q   D
Sbjct: 361 SSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKD 420

Query: 421 -GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWS 480
             SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT  M VP S
Sbjct: 421 SNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPS 480

Query: 481 ILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSM 540
           I+     + ++ D  +     KTQF TKVVV DDCI++E E  PNVVGL   +S ++ S+
Sbjct: 481 IIPQGRSETQSPDGKRN---LKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSI 540

Query: 541 NRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV 600
           N+Y CD+ADLPV+IL QVASQI+ WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Sbjct: 541 NKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHV 600

Query: 601 DPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLC 656
           +PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Sbjct: 601 NPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643

The following BLAST results are available for this feature:

BLAST of Cla97C08G145320.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141551.1	0.0e+00	95.62	PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis sativ...	[more]
XP_008459609.1	0.0e+00	94.71	PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo]...	[more]
XP_022987637.1	0.0e+00	91.99	mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]	[more]
XP_023516123.1	0.0e+00	92.15	mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subs...	[more]
XP_022961046.1	0.0e+00	91.39	mediator of RNA polymerase II transcription subunit 17-like [Cucurbita moschata]	[more]

BLAST of Cla97C08G145320.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KXX2\|A0A0A0KXX2_CUCSA	0.0e+00	95.62	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=365...	[more]
tr\|A0A1S4E2I2\|A0A1S4E2I2_CUCME	0.0e+00	94.71	mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A2I4HNZ5\|A0A2I4HNZ5_9ROSI	4.3e-267	73.56	Mediator of RNA polymerase II transcription subunit 17 OS=Juglans regia OX=51240...	[more]
tr\|A0A2P4MHG2\|A0A2P4MHG2_QUESU	3.6e-258	70.63	Mediator of rna polymerase ii transcription subunit 17 OS=Quercus suber OX=58331...	[more]
tr\|M5VWL4\|M5VWL4_PRUPE	3.9e-252	69.29	Mediator of RNA polymerase II transcription subunit 17 OS=Prunus persica OX=3760...	[more]

BLAST of Cla97C08G145320.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4K460\|MED17_ARATH	2.4e-204	58.88	Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana O...	[more]

BLAST of Cla97C08G145320.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20170.1	1.3e-205	58.88	RNA polymerase II transcription mediators	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016592	mediator complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0003712	transcription cofactor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006357	regulation of transcription from RNA polymerase II promoter

Vocabulary: **INTERPRO**
Term	Definition
IPR019313	Mediator_Med17

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003712	transcription cofactor activity
molecular_function	GO:0001104	RNA polymerase II transcription cofactor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C08G145320	Cla97C08G145320	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C08G145320.1	Cla97C08G145320.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C08G145320.1.CDS.8	Cla97C08G145320.1.CDS.8	CDS
Cla97C08G145320.1.CDS.7	Cla97C08G145320.1.CDS.7	CDS
Cla97C08G145320.1.CDS.6	Cla97C08G145320.1.CDS.6	CDS
Cla97C08G145320.1.CDS.5	Cla97C08G145320.1.CDS.5	CDS
Cla97C08G145320.1.CDS.4	Cla97C08G145320.1.CDS.4	CDS
Cla97C08G145320.1.CDS.3	Cla97C08G145320.1.CDS.3	CDS
Cla97C08G145320.1.CDS.2	Cla97C08G145320.1.CDS.2	CDS
Cla97C08G145320.1.CDS.1	Cla97C08G145320.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C08G145320.1.exon.8	Cla97C08G145320.1.exon.8	exon
Cla97C08G145320.1.exon.7	Cla97C08G145320.1.exon.7	exon
Cla97C08G145320.1.exon.6	Cla97C08G145320.1.exon.6	exon
Cla97C08G145320.1.exon.5	Cla97C08G145320.1.exon.5	exon
Cla97C08G145320.1.exon.4	Cla97C08G145320.1.exon.4	exon
Cla97C08G145320.1.exon.3	Cla97C08G145320.1.exon.3	exon
Cla97C08G145320.1.exon.2	Cla97C08G145320.1.exon.2	exon
Cla97C08G145320.1.exon.1	Cla97C08G145320.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019313	Mediator complex, subunit Med17	PFAM	PF10156	Med17	coord: 54..302 e-value: 6.4E-5 score: 21.8
IPR019313	Mediator complex, subunit Med17	PANTHER	PTHR13114	TRANSCRIPTIONAL CO-ACTIVATOR CRSP77-RELATED	coord: 2..653
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..262