Cla97C06G113550.1 (mRNA) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G113550.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Polyketide cyclase / dehydrase and lipid transport protein, putative
Location	Cla97Chr06 : 4464418 .. 4468858 (-)
Sequence length	888

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTACGACGACGATGCTCTCCTTTCTCAATTCGTCAGAACCAACGTATTCTTCTTCACTAACTTCCTCCTCCCTTTCCCGTTTACCTCCAACATTTCCGGCCACCGCCCCTCCCGCCCTTGCCGTCGTAGTTACTTTTAGACTCGATTCTTCTCTTTCACGTGTCGCCATCCCCATCACCAAATCAATCATCTCTTCCTCAGATACTACTACTTATCCTGCCAAACATTTTCGGTCCAGGTTCAGAAATTACTATTCGAATTCCGACCCCACCTTCTCAGATAGTGACGATAATGGCGATTACTCTGACGCCTCAGAATCTGAAACGATTTTTGACGACGGTGGTGGCCTAAGTATCCAAATCGAGAAGTTGGGTAACAACTCCCGCAGAATTTACTCGAGGATTTGTATTGATGCCCCACTCCAGGCCGTGTGGAATATCTTGACTGACTATGAGAGATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTACTTTTTAAGATTGGCAACCATGCCCGACTCTTTCAGGTAGTCTTTTATTCTTCTTCTTTTACCCTTTTTCCCTCTTTATGTTCTTAATTATGCAGGAATTTGAACACATTTAATGACTTCCGGAGTGCTCTCTTTTAAGATTGGTTATGAATGTATATATAGAACTAGAAGGTTAAATATACCATAGCCCAGCTTAAGTGTTGATTTTGATATACTTTAACATGGTATTATAACAACAGATAATGGATTCAAATTCCAACTGATATTGATGTTTTTATGCAAAATGTCATGAATTAAATTTATATAGTAATCCATTTTGTGGAGTGGTAAGAATTTATATAAATATACCATTTGTGAGGAGTGCTCCAGCCCTCATTTCTAACGCCTAGGCGTCCATAAGAACTATATGAGAACATAAAGGTATATCCTATCCCTTTTCTTCTTCGAAGATTTTATTTCCCCTCCCACCAAATGTTTTGAAGCCTTGAATGTGTAGTTTTGCCCTTCTTCTTGAATGAATTAGCCATTAGGGAAGCTCCATTTTTTAGGAAGGATCTCCTCCTCTTTGACACTTACAAGAATGCCGAGCTGCGGCTTGGATTTCATTTGTTGTTTTGTTTGGATGAAATACTCTCTCCTATCATGATTGCTATCTAATTTATCAACCATGGCATTGCTATTTATTTCTCCATTCTCAAAGCTCTCTTTATTATTTCTCTATTCTCCTCTATCGTCTGTCATTTCCCCTTTATTATGTCTCCATTCCCAAAGCTCCTATGGGAGTCGCTAATAAGATGGATAGGCTGGTCAGGAATTCTTTTGGAAAGGGAGGAAGCTATCGGCCTTGTGGTCATTTGGTGAATTGGGGAAAAACCTCCCTCCATTGTCATGGAGGTCTCGGTTTTGGAGCTTTCCAGTAGAGGAATAGTGCTCTTTTACTCAAGTGGTGGTTGTGGAGATTTACACATGAAAGGATGCTTTGTGGTGAAGAGTCGTCTCGAGCATTTATGGTGAAGATCCGAAAGGGCTAAAGACCTTTTAGTCGAATTAGGAAGTTAAGTTGGATCTCTAACCTTTTCAGGCTCAACAAAATTTGCCTTTTCATGACAACAGGTGGATTTTGTGGCAAGCTGGCTTCTTCATTGTCCTTTTAAGGCATTTGGTTGGAAAGAAACAATAGAATTTTTAGGGAGACCTTGGAAGAGGTGTAGTTGCTTCTTAGGTTTAATGCCTGATTTTTTTTTTTTTTAAAATTTTTTTCTTATTTTTATATATATATATATATATATATATTAATTTTTAATTTTTTGTTTTTTTTGTTTTTTTTGTTTTTGTAGTCTTCTCTTCTTGGACTGTCTTTTATATGCTATTTTTGTATTCTTTCATTTTCTCAATGAAACCCTAAATTTCTCATTAGAAAACCAGTAAGTAGTTAGAAAATAGAGCACATTTCCTTTTGAGAACTTCTGCATTTTGAACAAGACCAAAGAGCAGTGTTACCACTAATTGAAAGAATAATCTTTCCCCTGCCAGAAGAGTTCGGTTTCAATGTTTGCAGGGATGAAACTTCAAGATTTCTTTAGGTTGATTGCAAGCTTCAAAACGATAAAACCAAATTGATGATTTTTGAAATGCACTGGATATATCCCCACAGTTTCCTCTTAGATTTTCAAAGATTTATTTTTTCCACAATACTAAGCGAGCAGCCATTGTAACTAGGTACTGCAACCGCTTTCTTATGTTTTGTAGAATCTTATTTTTCAAACTGCTTATTGGTGGTGTTATAGCTATAGCAAATTCTTTTGTAACTACCACTATCTATGATCCTTCATGATTGGAAGGCTTTTTGTGAGTAGTTGTTGGAAGGGGGAACCCTCTTTCCCTGGCCCTTAGACTGTCTTTTTTGCTTTGTGTTACATCTTCCAGGTTTCATTAAGGGGGAAAAAAATCAAACAGAAGTTAGAAGAATTTGTTTGATTGGAAATTAAAAGAATGGACTAGCCTCCCTTAGACTTTTAGAATTCATGCACTTCAAGCCATCCAAAGACGCTTTCGTGTGGTAATTCAATAGGTAAGAGGTTTTCGTGTTGGAAAACAGAGCAGTGGATGCATTCTTGTTAACCACCCACGGTTTGACTTTCTTCCCTTGCTACACCGAGCATAATATGTTGAAAAGGTCAAGGAAGACATGGAGTAGACCCCCATTTGTTGAAATCAAGGTTGAGCTACTTAAAGACCCTGATATTATCCCACGTTTCTTACTGCAACTTGCAACAAGATAAGCAACTGTCCAGGGGGCAGTTGGTACTCGAACTCTTCGTCTTTGCTCCTTACCATCATGACACCGTTACGGAGATCACTTACGTACTTACAAGTGGGTCACTAGTGAATTGTATTGGTAACAGTAAGGCATGGAAGCTGACGTCAGAAAAATATGTTGAAGCCCCAAAATCTGAAAAGATCTCTGTATGCCACTGCCCCATAATCCAGTAGCCAGCAGCCCCAAAATCTGGGATGATCTCCATATACCACCACTGAGGATCCCTGGAAATCTATTATGAAATATCAGAAACTTGTTCTTCGATTGAATCGCCTGCAAAGTTGGGGACAGGGCCAACACTCCTTTTTTGGAATGATTTTTGGCTTCTAAATGATCCCCTGGCACACGTTTTCCCTCTCTATTGAGGAAATGTGGAATGAAGTTGCAAAAACATGGAATCTTTTTTGAGAAGGAACCCCCATATCTCCTCGTTTTGGTTTAGTACCTCCCTAGGCAGAATTCTTTAGAAGCTGCTAACAAAGGACCTATTTTCCACCAGCTCTCTATTGGTCAACACATCAACAACAATCCAGATTCTACTGCCAACTTTGATGACACAATTTGGAAGGATCATGTAGCATATTTTCGGATGTTCGTCCTCTCATCATGTGATTGGAGCACAGCCCTTCCAAATGACCCACACGGTCTCCTCACATACCTTATGTCCTATCCATTCAAAAGGTAGAAGTAATTTCTTTGGTTGATATTAATTTGGGCCTTCTTTTGGAAGTTGTGGGAAGAAAGCAATCAGCAGCTTTTTAGGGATAAGTTGTTTACTTTTAATCGATTTTTTGATGCTATGGTATTTCTTATGGTTTCTTGGTGTCATGATTTTTGTCAAACATGTGAATGAATTAGTATATCTCCCCATGCTTGTAATTTCGATTGCAGCTGGTGCTGCACATTGAGCTCCTTGAGTTGTGACTTGGTCTCTTTTGTTAGCGATTGTTGCAAATGTAATTTTTACGTGCCAAGATATTGCTTTCCTGAATTTAAAGTTGTTAATCTTCATATGCACTTTTGCTTATCTTCATGTGTATTAAACATGCTTTGGCATTCCTTCGATAGGTCGGAGAGCAAACCTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGACTTCCTTTGGGTAAAAGGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGAGAGTGGTCAATTGAGCAGGTAATTATCCTTTGCATAGATCAACGTTTTCCTATTAGAAGTAATTACGTCCATGAAACACTCATAAGAAATTATATCAGTAGGTCCTCTATTTTTCTTTTAATCCTTTTATTTATCATTAATACCTCAAACCATGAATTTCATAACTTCATTTTTAAAAAGGCTACCAACTCACTCATCAAAAGGTTATTGTTAATGCAGCTTGGTGAAGATGATAACTTACAAGATCAAGAAATACATTCAATTCTATCGTATAGGGTTGATGTAAAGCCAAAGCTTCTGTTGCCCGTTCGACTTCTTGAGGGTAGGCTTTGCAGTGAGATAAAGGCTAACCTAACGTGTATCCGAGAAGAAGTACATCGAACCAGTTCAACCACCTCCTAA

mRNA sequence

ATGCTTACGACGACGATGCTCTCCTTTCTCAATTCGTCAGAACCAACGTATTCTTCTTCACTAACTTCCTCCTCCCTTTCCCGTTTACCTCCAACATTTCCGGCCACCGCCCCTCCCGCCCTTGCCGTCGTAGTTACTTTTAGACTCGATTCTTCTCTTTCACGTGTCGCCATCCCCATCACCAAATCAATCATCTCTTCCTCAGATACTACTACTTATCCTGCCAAACATTTTCGGTCCAGGTTCAGAAATTACTATTCGAATTCCGACCCCACCTTCTCAGATAGTGACGATAATGGCGATTACTCTGACGCCTCAGAATCTGAAACGATTTTTGACGACGGTGGTGGCCTAAGTATCCAAATCGAGAAGTTGGGTAACAACTCCCGCAGAATTTACTCGAGGATTTGTATTGATGCCCCACTCCAGGCCGTGTGGAATATCTTGACTGACTATGAGAGATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTACTTTTTAAGATTGGCAACCATGCCCGACTCTTTCAGGTCGGAGAGCAAACCTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGACTTCCTTTGGGTAAAAGGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGAGAGTGGTCAATTGAGCAGCTTGGTGAAGATGATAACTTACAAGATCAAGAAATACATTCAATTCTATCGTATAGGGTTGATGTAAAGCCAAAGCTTCTGTTGCCCGTTCGACTTCTTGAGGGTAGGCTTTGCAGTGAGATAAAGGCTAACCTAACGTGTATCCGAGAAGAAGTACATCGAACCAGTTCAACCACCTCCTAA

Coding sequence (CDS)

ATGCTTACGACGACGATGCTCTCCTTTCTCAATTCGTCAGAACCAACGTATTCTTCTTCACTAACTTCCTCCTCCCTTTCCCGTTTACCTCCAACATTTCCGGCCACCGCCCCTCCCGCCCTTGCCGTCGTAGTTACTTTTAGACTCGATTCTTCTCTTTCACGTGTCGCCATCCCCATCACCAAATCAATCATCTCTTCCTCAGATACTACTACTTATCCTGCCAAACATTTTCGGTCCAGGTTCAGAAATTACTATTCGAATTCCGACCCCACCTTCTCAGATAGTGACGATAATGGCGATTACTCTGACGCCTCAGAATCTGAAACGATTTTTGACGACGGTGGTGGCCTAAGTATCCAAATCGAGAAGTTGGGTAACAACTCCCGCAGAATTTACTCGAGGATTTGTATTGATGCCCCACTCCAGGCCGTGTGGAATATCTTGACTGACTATGAGAGATTGGCAGATTTCATACCTGGTCTTGCTCTCAGCCAATTACTTTTTAAGATTGGCAACCATGCCCGACTCTTTCAGGTCGGAGAGCAAACCTTGGCCTTTGGTTTGAAATTTAATGCTAAAGGAACCATTGATTGTTATGAGAACGATCTTGAAAGACTTCCTTTGGGTAAAAGGCGAGTTATCAAATTCAAGATGATTGAAGGTGACTTTGAACTCTTTGAGGGAGAGTGGTCAATTGAGCAGCTTGGTGAAGATGATAACTTACAAGATCAAGAAATACATTCAATTCTATCGTATAGGGTTGATGTAAAGCCAAAGCTTCTGTTGCCCGTTCGACTTCTTGAGGGTAGGCTTTGCAGTGAGATAAAGGCTAACCTAACGTGTATCCGAGAAGAAGTACATCGAACCAGTTCAACCACCTCCTAA

Protein sequence

MLTTTMLSFLNSSEPTYSSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPITKSIISSSDTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGLSIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLFQVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQLGEDDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTTS

Homology

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BLAST of Cla97C06G113550.1 vs. NCBI nr
Match: XP_023006623.1 (uncharacterized protein LOC111499296 [Cucurbita maxima])

HSP 1 Score: 436.4 bits (1121), Expect = 7.6e-119
Identity = 232/296 (78.38%), Postives = 253/296 (85.47%), Query Frame = 0


Query: 6   MLSFLNSSEPTYSSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPITKSII 65
           MLSFLNSS+PTYSS L S S SRLPPTFPATA  A+AVVV FR D SLSRVA+  +    
Sbjct: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVVVNFRADPSLSRVAVSSSSRTK 60

Query: 66  SSS--DTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGLSIQIE 125
           SS+    +TYPAK+FRSRFR YYSNSDPTFSD+DDN +YSDASESETIF+D GG+SIQIE
Sbjct: 61  SSNIFSDSTYPAKYFRSRFRKYYSNSDPTFSDTDDNDEYSDASESETIFEDDGGVSIQIE 120

Query: 126 KLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLFQVGEQ 185
           KLGNNSRRIYSRI ID  LQ VWNILTDYE+LADFIPGLALSQL+FK GNHARLFQVG+Q
Sbjct: 121 KLGNNSRRIYSRIGIDVSLQTVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180

Query: 186 TLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQ-----LGE 245
            LAFG KFNAKGTIDCYENDLE LP GKRRVIKFKMIEGDF LFEGEWSIEQ     L +
Sbjct: 181 NLAFGFKFNAKGTIDCYENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 240

Query: 246 DDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTT 295
           D NLQDQE+++ILSYRVDVKPKL+LPVRL+EGRLC EIK NL CIREE H+TSSTT
Sbjct: 241 DGNLQDQELNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTT 296

[Close]

BLAST of Cla97C06G113550.1 vs. NCBI nr
Match: XP_023548259.1 (uncharacterized protein LOC111806945 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.9 bits (1117), Expect = 2.2e-118
Identity = 231/297 (77.78%), Postives = 252/297 (84.85%), Query Frame = 0


Query: 6   MLSFLNSSEPTYSSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPITKSII 65
           MLSFLNSS+PTYSS L S S SRLPP FPATA  A+AV V FR D SLSRVA+  +    
Sbjct: 2   MLSFLNSSDPTYSSPLISCSPSRLPPAFPATASAAVAVAVNFRADPSLSRVAVSSSSRTK 61

Query: 66  SSS--DTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGLSIQIE 125
           SS+    +TYPAKHFRSRFR YYSNSDP FSD+DDN DYSDASESETIF+D GG+SIQIE
Sbjct: 62  SSNLFSDSTYPAKHFRSRFRKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 121

Query: 126 KLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLFQVGEQ 185
           KLGNNSRRIYSRI IDA LQAVWNILTDYE+LADFIPGLALSQL+FK GNHARLFQVG+Q
Sbjct: 122 KLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 181

Query: 186 TLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQ-----LGE 245
            LAFG KFNAKGTIDCYENDLE LP G+RRVIKFKMIEGDF LFEGEWSIEQ     L +
Sbjct: 182 NLAFGFKFNAKGTIDCYENDLEILPSGRRRVIKFKMIEGDFALFEGEWSIEQFDEDRLED 241

Query: 246 DDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTTS 296
           D N QDQ++++ILSYRVDVKPKL+LPVRL+EGRLC EIK NL CIREE H+TSSTTS
Sbjct: 242 DGNSQDQDVNTILSYRVDVKPKLMLPVRLIEGRLCDEIKLNLMCIREEAHKTSSTTS 298

[Close]

BLAST of Cla97C06G113550.1 vs. NCBI nr
Match: XP_022959182.1 (uncharacterized protein LOC111460246 isoform X2 [Cucurbita moschata])

HSP 1 Score: 431.4 bits (1108), Expect = 2.5e-117
Identity = 231/297 (77.78%), Postives = 250/297 (84.18%), Query Frame = 0


Query: 6   MLSFLNSSEPTYSSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPITKSII 65
           MLSFLNSS+PTYSS L S S SRLPPTFPATA  A+AV V FR D SLSRVA+  +    
Sbjct: 1   MLSFLNSSDPTYSSPLISCSPSRLPPTFPATASAAVAVAVNFRADPSLSRVAVSSSSGTK 60

Query: 66  SSS--DTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGLSIQIE 125
           SS+    +TY AKHFRSRF  YYSNSDP FSD+DDN DYSDASESETIF+D GG+SIQIE
Sbjct: 61  SSNLFSDSTYHAKHFRSRFGKYYSNSDPAFSDTDDNDDYSDASESETIFEDDGGVSIQIE 120

Query: 126 KLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLFQVGEQ 185
           KLGNNSRRIYSRI IDA LQAVWNILTDYE+LADFIPGLALSQL+FK GNHARLFQVG+Q
Sbjct: 121 KLGNNSRRIYSRIGIDASLQAVWNILTDYEKLADFIPGLALSQLIFKTGNHARLFQVGQQ 180

Query: 186 TLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQ-----LGE 245
            LAFG KFNAKGTIDCYENDLE LP GKRRVIKFKMIEGDF LFEGEWSIEQ     L +
Sbjct: 181 NLAFGFKFNAKGTIDCYENDLEILPSGKRRVIKFKMIEGDFALFEGEWSIEQFDEDRLKD 240

Query: 246 DDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTTS 296
           D N QDQE ++ILSYRVDVKPKL+LP+RL+EGRLC EIK NL CIREE H+TSSTTS
Sbjct: 241 DGNSQDQEANTILSYRVDVKPKLMLPIRLIEGRLCDEIKLNLMCIREEAHKTSSTTS 297

[Close]

BLAST of Cla97C06G113550.1 vs. NCBI nr
Match: XP_008458275.1 (PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo])

HSP 1 Score: 427.2 bits (1097), Expect = 4.6e-116
Identity = 233/298 (78.19%), Postives = 245/298 (82.21%), Query Frame = 0


Query: 6   MLSFLNSSEPTY-----SSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPI 65
           M SFLNSSEPTY                            LAVV TFR+  SLSR+AI  
Sbjct: 1   MRSFLNSSEPTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVVPTFRVHPSLSRLAILA 60

Query: 66  TKS--IISSSDTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGL 125
           TKS  I SS  +TTYP KHFRSRFRNYYSNS+PTFSDSD+NGDYSD S+SETIFDDGGGL
Sbjct: 61  TKSTTIPSSYSSTTYPPKHFRSRFRNYYSNSEPTFSDSDENGDYSDVSDSETIFDDGGGL 120

Query: 126 SIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLF 185
            IQIEKLG NSRRIYSRI IDAPLQAVWNILTDYERLADFIPGLA+SQ+LFKIGNHARLF
Sbjct: 121 CIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIGNHARLF 180

Query: 186 QVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQLGE 245
           QVGEQ LAFG KFNAKGTIDCYENDLERLP GKRRVIKFKMIEGDFELFEGEWSIEQ GE
Sbjct: 181 QVGEQNLAFGFKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240

Query: 246 -DDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTTS 296
            DD+ QDQE+HS LSY VDVKPKLLLPVRLLEGRLCSEIKANL CIREEVH+TSSTT+
Sbjct: 241 DDDSFQDQEVHSTLSYSVDVKPKLLLPVRLLEGRLCSEIKANLMCIREEVHKTSSTTT 298

[Close]

BLAST of Cla97C06G113550.1 vs. NCBI nr
Match: XP_004138514.2 (PREDICTED: uncharacterized protein LOC101204838 [Cucumis sativus] >KGN45631.1 hypothetical protein Csa_6G001770 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 2.8e-113
Identity = 228/297 (76.77%), Postives = 242/297 (81.48%), Query Frame = 0


Query: 6   MLSFLNSSEPTY-----SSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPI 65
           MLSFLNSSEP++                           ALAVV TFR+  SLS +AI  
Sbjct: 1   MLSFLNSSEPSFXXXXXXXXXXXXXXXXXXXXXXXXXSAALAVVPTFRVHPSLSSLAILT 60

Query: 66  TK--SIISSSDTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGL 125
           TK  +I  S  +TTYP KHFRSRFRNYYSNS+PTFSD D+NGDYSD S+SETIFDDGGGL
Sbjct: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120

Query: 126 SIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLF 185
           SIQIEKLG NSRRIYSRI IDAPLQAVWNILTDYERLADFIPGLA+SQ+LFKI NH RLF
Sbjct: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180

Query: 186 QVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQLGE 245
           QVGEQ LAFGLKFNAKGTIDCYENDLERLP GKRRVIKFKMIEGDFELFEGEWSIEQ GE
Sbjct: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240

Query: 246 -DDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTT 295
            DD+ QDQEIHS LSY VDVKPKLLLPVRLLEGRLC EIKANL CIREEVH+T+STT
Sbjct: 241 DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTT 297

[Close]

BLAST of Cla97C06G113550.1 vs. TrEMBL
Match: tr|A0A1S3C7G7|A0A1S3C7G7_CUCME (uncharacterized protein LOC103497743 OS=Cucumis melo OX=3656 GN=LOC103497743 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 3.1e-116
Identity = 233/298 (78.19%), Postives = 245/298 (82.21%), Query Frame = 0


Query: 6   MLSFLNSSEPTY-----SSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPI 65
           M SFLNSSEPTY                            LAVV TFR+  SLSR+AI  
Sbjct: 1   MRSFLNSSEPTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVVPTFRVHPSLSRLAILA 60

Query: 66  TKS--IISSSDTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGL 125
           TKS  I SS  +TTYP KHFRSRFRNYYSNS+PTFSDSD+NGDYSD S+SETIFDDGGGL
Sbjct: 61  TKSTTIPSSYSSTTYPPKHFRSRFRNYYSNSEPTFSDSDENGDYSDVSDSETIFDDGGGL 120

Query: 126 SIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLF 185
            IQIEKLG NSRRIYSRI IDAPLQAVWNILTDYERLADFIPGLA+SQ+LFKIGNHARLF
Sbjct: 121 CIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIGNHARLF 180

Query: 186 QVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQLGE 245
           QVGEQ LAFG KFNAKGTIDCYENDLERLP GKRRVIKFKMIEGDFELFEGEWSIEQ GE
Sbjct: 181 QVGEQNLAFGFKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240

Query: 246 -DDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTTS 296
            DD+ QDQE+HS LSY VDVKPKLLLPVRLLEGRLCSEIKANL CIREEVH+TSSTT+
Sbjct: 241 DDDSFQDQEVHSTLSYSVDVKPKLLLPVRLLEGRLCSEIKANLMCIREEVHKTSSTTT 298

[Close]

BLAST of Cla97C06G113550.1 vs. TrEMBL
Match: tr|A0A0A0KCX4|A0A0A0KCX4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001770 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.9e-113
Identity = 228/297 (76.77%), Postives = 242/297 (81.48%), Query Frame = 0


Query: 6   MLSFLNSSEPTY-----SSSLTSSSLSRLPPTFPATAPPALAVVVTFRLDSSLSRVAIPI 65
           MLSFLNSSEP++                           ALAVV TFR+  SLS +AI  
Sbjct: 1   MLSFLNSSEPSFXXXXXXXXXXXXXXXXXXXXXXXXXSAALAVVPTFRVHPSLSSLAILT 60

Query: 66  TK--SIISSSDTTTYPAKHFRSRFRNYYSNSDPTFSDSDDNGDYSDASESETIFDDGGGL 125
           TK  +I  S  +TTYP KHFRSRFRNYYSNS+PTFSD D+NGDYSD S+SETIFDDGGGL
Sbjct: 61  TKPTTIPFSYSSTTYPPKHFRSRFRNYYSNSEPTFSDRDENGDYSDVSDSETIFDDGGGL 120

Query: 126 SIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLF 185
           SIQIEKLG NSRRIYSRI IDAPLQAVWNILTDYERLADFIPGLA+SQ+LFKI NH RLF
Sbjct: 121 SIQIEKLGTNSRRIYSRIGIDAPLQAVWNILTDYERLADFIPGLAISQILFKIDNHVRLF 180

Query: 186 QVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQLGE 245
           QVGEQ LAFGLKFNAKGTIDCYENDLERLP GKRRVIKFKMIEGDFELFEGEWSIEQ GE
Sbjct: 181 QVGEQNLAFGLKFNAKGTIDCYENDLERLPFGKRRVIKFKMIEGDFELFEGEWSIEQFGE 240

Query: 246 -DDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTSSTT 295
            DD+ QDQEIHS LSY VDVKPKLLLPVRLLEGRLC EIKANL CIREEVH+T+STT
Sbjct: 241 DDDSFQDQEIHSTLSYSVDVKPKLLLPVRLLEGRLCGEIKANLVCIREEVHKTNSTT 297

[Close]

BLAST of Cla97C06G113550.1 vs. TrEMBL
Match: tr|A0A2I4FMS7|A0A2I4FMS7_9ROSI (uncharacterized protein LOC109000500 isoform X1 OS=Juglans regia OX=51240 GN=LOC109000500 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.3e-61
Identity = 122/183 (66.67%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 117 GLSIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHAR 176
           G+ I+IEKLG N+RRI SRI IDAPL  +WNILTDYERL+DFIPGLALSQLL K  N+AR
Sbjct: 113 GVCIEIEKLGKNTRRIRSRIAIDAPLHTIWNILTDYERLSDFIPGLALSQLLQKTHNYAR 172

Query: 177 LFQVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEGDFELFEGEWSIEQL 236
           LFQ+G+Q LAFGLKFNAKG +DCYE +LE LP G++R I+FKMIEGDF+LFEG+WSIEQ 
Sbjct: 173 LFQIGQQNLAFGLKFNAKGIVDCYEKELESLPSGQKRDIEFKMIEGDFQLFEGKWSIEQS 232

Query: 237 G-----EDDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREEVHRTS 295
                 + D+L  Q+ ++ LSY VDVKPKL LPV+L+EGRLC EIK NLT IREE  +  
Sbjct: 233 NRGRDEDSDSLVLQQFYTTLSYLVDVKPKLWLPVQLVEGRLCKEIKLNLTSIREEALKAV 292

[Close]

BLAST of Cla97C06G113550.1 vs. TrEMBL
Match: tr|M5X9F1|M5X9F1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa017230mg PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.4e-57
Identity = 114/170 (67.06%), Postives = 137/170 (80.59%), Query Frame = 0


Query: 122 IEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGLALSQLLFKIGNHARLFQVG 181
           IEK GNN RRI S I I+APL  VWN+LTDYERLADFIPGLA+ +LL K  N+ARLFQ+G
Sbjct: 105 IEKTGNNCRRIRSEIGIEAPLNTVWNLLTDYERLADFIPGLAVCRLLHKTDNYARLFQIG 164

Query: 182 EQTLAFGLKFNAKGTIDCYENDLERLP-LGKRRVIKFKMIEGDFELFEGEWSIEQLGE-- 241
           +Q LAFGLKFNAKG +DCYE  LE LP LG +R I+F M+EGDFE+F+G+WS+++L    
Sbjct: 165 QQNLAFGLKFNAKGIVDCYETPLEILPNLGHKRDIEFNMVEGDFEIFQGKWSLQRLNREI 224

Query: 242 --DDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIKANLTCIREE 287
             DD+L +Q++H+ LSY VDVKPKL LPVRL+EGRLC EIK NL CIREE
Sbjct: 225 SCDDSLIEQQMHTTLSYLVDVKPKLWLPVRLVEGRLCKEIKINLACIREE 274

[Close]

BLAST of Cla97C06G113550.1 vs. TrEMBL
Match: tr|A0A2R6PNY1|A0A2R6PNY1_ACTCH (UPF0187 protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc25437 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.2e-57
Identity = 119/201 (59.20%), Postives = 148/201 (73.63%), Query Frame = 0


Query: 97  DDNGDYSDASESETIF-DDGGGLSIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERL 156
           D + D+S   +S +I+     G+ I+IEK+G NSRRI SRI I+A LQ VW+ILTDYE+L
Sbjct: 49  DHDFDFSGGMDSPSIYRGSDDGIEIEIEKIGKNSRRIRSRIAIEASLQTVWDILTDYEKL 108

Query: 157 ADFIPGLALSQLLFKIGNHARLFQVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVI 216
            DFIPGLA+ QLL K GN  RLFQ+G+Q LAFGL FNAKG +DCYE DLE L  G RR I
Sbjct: 109 VDFIPGLAVCQLLEKRGNFVRLFQIGQQKLAFGLNFNAKGIVDCYERDLESLACGYRRDI 168

Query: 217 KFKMIEGDFELFEGEWSIEQLG-----EDDNLQDQEIHSILSYRVDVKPKLLLPVRLLEG 276
           +FKMI+GDF+LF+G+WSIEQ       + D+L  QE  + LSY VDV+PKL LPVRL+EG
Sbjct: 169 EFKMIKGDFQLFKGKWSIEQYNTKRNEDKDSLVGQEFQTTLSYVVDVEPKLWLPVRLVEG 228

Query: 277 RLCSEIKANLTCIREEVHRTS 292
           RLC EIK NL+C+R E  + +
Sbjct: 229 RLCREIKVNLSCVRVEAQKAN 249

[Close]

BLAST of Cla97C06G113550.1 vs. TAIR10
Match: AT4G01650.1 (Polyketide cyclase / dehydrase and lipid transport protein)

HSP 1 Score: 212.2 bits (539), Expect = 4.2e-55
Identity = 107/192 (55.73%), Postives = 142/192 (73.96%), Query Frame = 0


Query: 103 SDASESETIFDDGGGLSIQIEKLGNNSRRIYSRICIDAPLQAVWNILTDYERLADFIPGL 162
           +D    E +  D G L I+++KL  +SRRI S+I ++A L +VW++LTDYE+L+DFIPGL
Sbjct: 89  TDGKTEELVVGDDGVL-IELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGL 148

Query: 163 ALSQLLFKIGNHARLFQVGEQTLAFGLKFNAKGTIDCYENDLERLPLGKRRVIKFKMIEG 222
            +S+L+ K GN  RLFQ+G+Q LA GLKFNAK  +DCYE +LE LP G+RR I FKM+EG
Sbjct: 149 VVSELVEKEGNRVRLFQMGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVEG 208

Query: 223 DFELFEGEWSIEQL-----GEDDNLQDQEIHSILSYRVDVKPKLLLPVRLLEGRLCSEIK 282
           DF+LFEG+WSIEQL     GE  +LQ ++  + L+Y VDVKPK+ LPVRL+EGRLC EI+
Sbjct: 209 DFQLFEGKWSIEQLDKGIHGEALDLQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEIR 268

Query: 283 ANLTCIREEVHR 290
            NL  IR+   +
Sbjct: 269 TNLMSIRDAAQK 279

[Close]

BLAST of Cla97C06G113550.1 vs. TAIR10
Match: AT5G08720.1 (Streptomyces cyclase/dehydrase (InterPro:IPR005031))

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 62/199 (31.16%), Postives = 98/199 (49.25%), Query Frame = 0


Query: 94  SDSDDNGDYSDASESETIFDDGGGLSI--QIEKLGNNSRRIYSRICIDAPLQAVWNILTD 153
           S +   GD     +S   FD+ G   +  +++ +    RRI   I +D+  Q+VWN+LTD
Sbjct: 59  SGAGGRGDNGLRRDSGLGFDERGERKVRCEVDVISWRERRIRGEIWVDSDSQSVWNVLTD 118

Query: 154 YERLADFIPGLALS-QLLFKIGNHARLFQVGEQTLAFGLKFNAKGTIDCYENDLERLPLG 213
           YERLADFIP L  S ++         L Q G Q  A      A+  +D +    E L   
Sbjct: 119 YERLADFIPNLVWSGRIPCPHPGRIWLEQRGLQR-ALYWHIEARVVLDLH----ECLDSP 178

Query: 214 KRRVIKFKMIEGDFELFEGEWSIEQLGEDDNLQDQEIHSILSYRVDVKPKLLLPVRLLEG 273
             R + F M++GDF+ FEG+WS++          + + ++LSY V+V P+   P   LE 
Sbjct: 179 NGRELHFSMVDGDFKKFEGKWSVKS-------GIRSVGTVLSYEVNVIPRFNFPAIFLER 238

Query: 274 RLCSEIKANLTCIREEVHR 290
            + S++  NL  +  +  +
Sbjct: 239 IIRSDLPVNLRAVARQAEK 245

The following BLAST results are available for this feature:

BLAST of Cla97C06G113550.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006623.1	7.6e-119	78.38	uncharacterized protein LOC111499296 [Cucurbita maxima]	[more]
XP_023548259.1	2.2e-118	77.78	uncharacterized protein LOC111806945 [Cucurbita pepo subsp. pepo]	[more]
XP_022959182.1	2.5e-117	77.78	uncharacterized protein LOC111460246 isoform X2 [Cucurbita moschata]	[more]
XP_008458275.1	4.6e-116	78.19	PREDICTED: uncharacterized protein LOC103497743 [Cucumis melo]	[more]
XP_004138514.2	2.8e-113	76.77	PREDICTED: uncharacterized protein LOC101204838 [Cucumis sativus] >KGN45631.1 hy...	[more]

BLAST of Cla97C06G113550.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C7G7\|A0A1S3C7G7_CUCME	3.1e-116	78.19	uncharacterized protein LOC103497743 OS=Cucumis melo OX=3656 GN=LOC103497743 PE=...	[more]
tr\|A0A0A0KCX4\|A0A0A0KCX4_CUCSA	1.9e-113	76.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G001770 PE=4 SV=1	[more]
tr\|A0A2I4FMS7\|A0A2I4FMS7_9ROSI	6.3e-61	66.67	uncharacterized protein LOC109000500 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|M5X9F1\|M5X9F1_PRUPE	1.4e-57	67.06	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa017230mg PE=4 SV=1	[more]
tr\|A0A2R6PNY1\|A0A2R6PNY1_ACTCH	3.2e-57	59.20	UPF0187 protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc254...	[more]

BLAST of Cla97C06G113550.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C06G113550.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01650.1	4.2e-55	55.73	Polyketide cyclase / dehydrase and lipid transport protein	[more]
AT5G08720.1	1.3e-16	31.16	Streptomyces cyclase/dehydrase (InterPro:IPR005031)	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR023393	START-like_dom_sf
IPR005031	COQ10_START

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C06G113550	Cla97C06G113550	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C06G113550.1	Cla97C06G113550.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C06G113550.1.CDS.3	Cla97C06G113550.1.CDS.3	CDS
Cla97C06G113550.1.CDS.2	Cla97C06G113550.1.CDS.2	CDS
Cla97C06G113550.1.CDS.1	Cla97C06G113550.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C06G113550.1.exon.3	Cla97C06G113550.1.exon.3	exon
Cla97C06G113550.1.exon.2	Cla97C06G113550.1.exon.2	exon
Cla97C06G113550.1.exon.1	Cla97C06G113550.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005031	Coenzyme Q-binding protein COQ10, START domain	PFAM	PF03364	Polyketide_cyc	coord: 138..282 e-value: 4.5E-22 score: 78.5
IPR023393	START-like domain superfamily	GENE3D	G3DSA:3.30.530.20		coord: 131..291 e-value: 1.5E-18 score: 68.9
None	No IPR available	PANTHER	PTHR34060:SF1	POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN	coord: 47..291
None	No IPR available	PANTHER	PTHR34060	FAMILY NOT NAMED	coord: 47..291
None	No IPR available	CDD	cd08866	SRPBCC_11	coord: 134..289 e-value: 1.97719E-50 score: 164.326
None	No IPR available	SUPERFAMILY	SSF55961	Bet v1-like	coord: 132..289