Cla97C05G090090.1 (mRNA) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTATTCATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTATTTTCAACTTCTTTTATTGTGCGTCGAACAATTTGGAATCGAAGCTTTGGTAGTGATGATCGATTTGAGCTTTTTGTGGAACCCTATAAGAAGAGGTTGGAGGGATCAGAGTTTGGTTACTTTGCTGATGAAAAATCGGATTCTTGTGAGATTGAGAGTGGTAGATGCGATGGTTTTTCATTGAGAAGGGGTTTTCTAGAGGGTGCGAAAACAGATGCTGAAAAAGTTATTGAGATTCTCAAACAGGATGGTCCTGGATTTGACACATTTTTGGCCTTAGATGAACTGCAACTCCAGGTCTCAGGGGTACTTGTTGGGGAAGTTTTGAAGGGAATTTTGAAAAGTACAGGTGTTCTAAACAAAAATCAGTGTGCAAAATTGGGGTACAAGTTTTTCATATGGTCCAGTAAGATTGAGAATTATAGACACACTGTGAAATCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTATGATACTGATATGTACTTGTGGTGATGCAGGCTTGGCTAAGAAAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTCAGGCCGTTTAAACATTCATATAATGCCATTCTTCATGGACTACTTGTTGTAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCCCAGACATTCTCACATATAATGTGCTATTGTTTGCAAGATGCAAATTGGGGAAATTGGATCAATTTCACAGATTGCTTGATGAAATGGCCAGGAGTGGTTTTTCCCCTGATTTTCATACTTATAACATTCTTCTTTACGTTCTTGGCAAAGGAGACAAACCCCTTGCTGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGCTTTGATCCGAGTGTTCTTCACTTCACGACGCTTATAAATGGGCTTAGTCGGGCTGGAAATTTGGATGCTTGTAAATATTTTTTTGATGAACTAGGAAACTATGGCTGCATTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTATACAGAGGCTGGGGAGCATGAGAAAGCTAGGGAATATTTTGAAGAGATGGTAATTAAGGGCCAGCTCCCTAATGTATTTACGTACAACTCCATGATTCGTGGTTTTTGTATGGTGGGTAAGTTCGAGGAGGCTTACTCTATGCTCACTGAAATGGAATCCCAAGGTTGCAGACCAAATTTTCTTCTATATAGTACCCTTGTAAGTTATTTGCGAAATGCAGGAAAGCTTTCCGAGGCTCACAAAGTTATAATGCACATGGTCGAGAAGGGGCAATATGCCCATTTAGTGACAAAATTTAAGGGATATAGGAGATGGTAG ATGAACTATTCATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTATTTTCAACTTCTTTTATTGTGCGTCGAACAATTTGGAATCGAAGCTTTGGTAGTGATGATCGATTTGAGCTTTTTGTGGAACCCTATAAGAAGAGGTTGGAGGGATCAGAGTTTGGTTACTTTGCTGATGAAAAATCGGATTCTTGTGAGATTGAGAGTGGTAGATGCGATGGTTTTTCATTGAGAAGGGGTTTTCTAGAGGGTGCGAAAACAGATGCTGAAAAAGTTATTGAGATTCTCAAACAGGATGGTCCTGGATTTGACACATTTTTGGCCTTAGATGAACTGCAACTCCAGGTCTCAGGGGTACTTGTTGGGGAAGTTTTGAAGGGAATTTTGAAAAGTACAGGTGTTCTAAACAAAAATCAGTGTGCAAAATTGGGGTACAAGTTTTTCATATGGTCCAGTAAGATTGAGAATTATAGACACACTGTGAAATCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTATGATACTGATATGTACTTGTGGTGATGCAGGCTTGGCTAAGAAAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTCAGGCCGTTTAAACATTCATATAATGCCATTCTTCATGGACTACTTGTTGTAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCCCAGACATTCTCACATATAATGTGCTATTGTTTGCAAGATGCAAATTGGGGAAATTGGATCAATTTCACAGATTGCTTGATGAAATGGCCAGGAGTGGTTTTTCCCCTGATTTTCATACTTATAACATTCTTCTTTACGTTCTTGGCAAAGGAGACAAACCCCTTGCTGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGCTTTGATCCGAGTGTTCTTCACTTCACGACGCTTATAAATGGGCTTAGTCGGGCTGGAAATTTGGATGCTTGTAAATATTTTTTTGATGAACTAGGAAACTATGGCTGCATTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTATACAGAGGCTGGGGAGCATGAGAAAGCTAGGGAATATTTTGAAGAGATGGTAATTAAGGGCCAGCTCCCTAATGTATTTACGTACAACTCCATGATTCGTGGTTTTTGTATGGTGGGTAAGTTCGAGGAGGCTTACTCTATGCTCACTGAAATGGAATCCCAAGGTTGCAGACCAAATTTTCTTCTATATAGTACCCTTGTAAGTTATTTGCGAAATGCAGGAAAGCTTTCCGAGGCTCACAAAGTTATAATGCACATGGTCGAGAAGGGGCAATATGCCCATTTAGTGACAAAATTTAAGGGATATAGGAGATGGTAG ATGAACTATTCATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTATTTTCAACTTCTTTTATTGTGCGTCGAACAATTTGGAATCGAAGCTTTGGTAGTGATGATCGATTTGAGCTTTTTGTGGAACCCTATAAGAAGAGGTTGGAGGGATCAGAGTTTGGTTACTTTGCTGATGAAAAATCGGATTCTTGTGAGATTGAGAGTGGTAGATGCGATGGTTTTTCATTGAGAAGGGGTTTTCTAGAGGGTGCGAAAACAGATGCTGAAAAAGTTATTGAGATTCTCAAACAGGATGGTCCTGGATTTGACACATTTTTGGCCTTAGATGAACTGCAACTCCAGGTCTCAGGGGTACTTGTTGGGGAAGTTTTGAAGGGAATTTTGAAAAGTACAGGTGTTCTAAACAAAAATCAGTGTGCAAAATTGGGGTACAAGTTTTTCATATGGTCCAGTAAGATTGAGAATTATAGACACACTGTGAAATCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTATGATACTGATATGTACTTGTGGTGATGCAGGCTTGGCTAAGAAAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTCAGGCCGTTTAAACATTCATATAATGCCATTCTTCATGGACTACTTGTTGTAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCCCAGACATTCTCACATATAATGTGCTATTGTTTGCAAGATGCAAATTGGGGAAATTGGATCAATTTCACAGATTGCTTGATGAAATGGCCAGGAGTGGTTTTTCCCCTGATTTTCATACTTATAACATTCTTCTTTACGTTCTTGGCAAAGGAGACAAACCCCTTGCTGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGCTTTGATCCGAGTGTTCTTCACTTCACGACGCTTATAAATGGGCTTAGTCGGGCTGGAAATTTGGATGCTTGTAAATATTTTTTTGATGAACTAGGAAACTATGGCTGCATTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTATACAGAGGCTGGGGAGCATGAGAAAGCTAGGGAATATTTTGAAGAGATGGTAATTAAGGGCCAGCTCCCTAATGTATTTACGTACAACTCCATGATTCGTGGTTTTTGTATGGTGGGTAAGTTCGAGGAGGCTTACTCTATGCTCACTGAAATGGAATCCCAAGGTTGCAGACCAAATTTTCTTCTATATAGTACCCTTGTAAGTTATTTGCGAAATGCAGGAAAGCTTTCCGAGGCTCACAAAGTTATAATGCACATGGTCGAGAAGGGGCAATATGCCCATTTAGTGACAAAATTTAAGGGATATAGGAGATGGTAG MNYSSLVSSRIVCRLFSTSFIVRRTIWNRSFGSDDRFELFVEPYKKRLEGSEFGYFADEKSDSCEIESGRCDGFSLRRGFLEGAKTDAEKVIEILKQDGPGFDTFLALDELQLQVSGVLVGEVLKGILKSTGVLNKNQCAKLGYKFFIWSSKIENYRHTVKSYHMIMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLAKKVVERFIKSKTFNFRPFKHSYNAILHGLLVVKQYKLIEWVYQQMLLDGHSPDILTYNVLLFARCKLGKLDQFHRLLDEMARSGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFDPSVLHFTTLINGLSRAGNLDACKYFFDELGNYGCIPDVVCYTVMITSYTEAGEHEKAREYFEEMVIKGQLPNVFTYNSMIRGFCMVGKFEEAYSMLTEMESQGCRPNFLLYSTLVSYLRNAGKLSEAHKVIMHMVEKGQYAHLVTKFKGYRRW
BLAST of Cla97C05G090090.1 vs. NCBI nr
Match: XP_023552266.1 (pentatricopeptide repeat-containing protein At1g55630-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552267.1 pentatricopeptide repeat-containing protein At1g55630-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023552268.1 pentatricopeptide repeat-containing protein At1g55630-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 475.7 bits (1223), Expect = 1.9e-130 Identity = 236/267 (88.39%), Postives = 243/267 (91.01%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. NCBI nr
Match: XP_023552269.1 (pentatricopeptide repeat-containing protein At1g55630-like isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 472.2 bits (1214), Expect = 2.1e-129 Identity = 234/267 (87.64%), Postives = 241/267 (90.26%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. NCBI nr
Match: XP_022985444.1 (pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita maxima]) HSP 1 Score: 466.1 bits (1198), Expect = 1.5e-127 Identity = 232/267 (86.89%), Postives = 238/267 (89.14%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. NCBI nr
Match: XP_022922468.1 (pentatricopeptide repeat-containing protein At1g55630-like [Cucurbita moschata]) HSP 1 Score: 464.9 bits (1195), Expect = 3.3e-127 Identity = 231/267 (86.52%), Postives = 239/267 (89.51%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. NCBI nr
Match: XP_008439226.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis melo]) HSP 1 Score: 457.2 bits (1175), Expect = 6.9e-125 Identity = 230/267 (86.14%), Postives = 239/267 (89.51%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TrEMBL
Match: tr|A0A1S3AYB3|A0A1S3AYB3_CUCME (pentatricopeptide repeat-containing protein At1g55630-like OS=Cucumis melo OX=3656 GN=LOC103484076 PE=4 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 4.5e-125 Identity = 230/267 (86.14%), Postives = 239/267 (89.51%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TrEMBL
Match: tr|A0A0A0L8P4|A0A0A0L8P4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182100 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.3e-119 Identity = 220/267 (82.40%), Postives = 233/267 (87.27%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TrEMBL
Match: tr|A0A251QNA4|A0A251QNA4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G294500 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 3.8e-87 Identity = 167/270 (61.85%), Postives = 201/270 (74.44%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TrEMBL
Match: tr|A0A2N9GTB9|A0A2N9GTB9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30482 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.9e-86 Identity = 167/270 (61.85%), Postives = 202/270 (74.81%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TrEMBL
Match: tr|A0A2P5ABM2|A0A2P5ABM2_9ROSA (Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_354170 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 6.0e-85 Identity = 167/270 (61.85%), Postives = 199/270 (73.70%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. Swiss-Prot
Match: sp|Q7X6A5|PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana OX=3702 GN=At1g55630 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 2.3e-71 Identity = 142/266 (53.38%), Postives = 181/266 (68.05%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. Swiss-Prot
Match: sp|Q9M1D8|PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana OX=3702 GN=At3g60050 PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 5.3e-68 Identity = 137/266 (51.50%), Postives = 186/266 (69.92%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. Swiss-Prot
Match: sp|Q9FH87|PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.4e-12 Identity = 52/184 (28.26%), Postives = 93/184 (50.54%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. Swiss-Prot
Match: sp|Q9SAJ5|PP133_ARATH (Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana OX=3702 GN=At1g79540 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 9.1e-12 Identity = 42/138 (30.43%), Postives = 76/138 (55.07%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. Swiss-Prot
Match: sp|Q9FVX2|PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 1.0e-10 Identity = 50/181 (27.62%), Postives = 88/181 (48.62%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TAIR10
Match: AT1G55630.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 271.2 bits (692), Expect = 1.3e-72 Identity = 142/266 (53.38%), Postives = 181/266 (68.05%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TAIR10
Match: AT3G60050.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 260.0 bits (663), Expect = 2.9e-69 Identity = 137/266 (51.50%), Postives = 186/266 (69.92%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TAIR10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-13 Identity = 52/184 (28.26%), Postives = 93/184 (50.54%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TAIR10
Match: AT1G79540.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 73.2 bits (178), Expect = 5.1e-13 Identity = 42/138 (30.43%), Postives = 76/138 (55.07%), Query Frame = 0
BLAST of Cla97C05G090090.1 vs. TAIR10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 5.6e-12 Identity = 50/181 (27.62%), Postives = 88/181 (48.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
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