Cla97C05G084880.1 (mRNA) Watermelon (97103) v2

Overview
NameCla97C05G084880.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionEmbryo sac development arrest 6, putative
LocationCla97Chr05 : 3677486 .. 3677866 (+)
Sequence length381
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACTCCATTTCCACAACCGTGGGCTCTTATCGGCTGGGCCGTCCAGAAAGCGTAAGGAGCCATCCGCGCCGGCGGCTCCTAAAGCCGTTGAGCCATCGGTTTTATCCAACCGGCTTCTAGCCGGGTACATGGCTTATGAGTTTCTAACAAAAGGGACTCTGTTGGGCCGGAAGTTCGACCCGGCTCGAGCCGACGCAAGCCCATCCACCGCCACCCAGTGGAAGAAGCCGAAGTCGGAAGCCGCACCGCCGGAGATCTTGAAGAAAGAGCATCAGATTCAGAGTTACGCTGAGGTGGCAACCATCCTGAAGACTACTGGGGCCCACATATCCGGAATCGTTAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTGA

mRNA sequence

ATGAGACTCCATTTCCACAACCGTGGGCTCTTATCGGCTGGGCCGTCCAGAAAGCGTAAGGAGCCATCCGCGCCGGCGGCTCCTAAAGCCGTTGAGCCATCGGTTTTATCCAACCGGCTTCTAGCCGGGTACATGGCTTATGAGTTTCTAACAAAAGGGACTCTGTTGGGCCGGAAGTTCGACCCGGCTCGAGCCGACGCAAGCCCATCCACCGCCACCCAGTGGAAGAAGCCGAAGTCGGAAGCCGCACCGCCGGAGATCTTGAAGAAAGAGCATCAGATTCAGAGTTACGCTGAGGTGGCAACCATCCTGAAGACTACTGGGGCCCACATATCCGGAATCGTTAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTGA

Coding sequence (CDS)

ATGAGACTCCATTTCCACAACCGTGGGCTCTTATCGGCTGGGCCGTCCAGAAAGCGTAAGGAGCCATCCGCGCCGGCGGCTCCTAAAGCCGTTGAGCCATCGGTTTTATCCAACCGGCTTCTAGCCGGGTACATGGCTTATGAGTTTCTAACAAAAGGGACTCTGTTGGGCCGGAAGTTCGACCCGGCTCGAGCCGACGCAAGCCCATCCACCGCCACCCAGTGGAAGAAGCCGAAGTCGGAAGCCGCACCGCCGGAGATCTTGAAGAAAGAGCATCAGATTCAGAGTTACGCTGAGGTGGCAACCATCCTGAAGACTACTGGGGCCCACATATCCGGAATCGTTAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTGA

Protein sequence

MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLGRWLQK
Homology
[Close]
BLAST of Cla97C05G084880.1 vs. NCBI nr
Match: XP_011650922.1 (PREDICTED: uncharacterized protein LOC105434827 [Cucumis sativus] >KGN56835.1 hypothetical protein Csa_3G134830 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51
Identity = 107/130 (82.31%), Postives = 115/130 (88.46%), Query Frame = 0 

Query: 1   MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKF 60
           M  HFH+RGLLSAGPS+KRKEPS P+A KA EPSV SNRLLAGYMAYEFLTKGTL GRKF
Sbjct: 1   MSFHFHSRGLLSAGPSKKRKEPSTPSASKAGEPSVSSNRLLAGYMAYEFLTKGTLFGRKF 60

Query: 61  DPARADASPSTAT----QWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVN 120
           DP R +A+PS A+    QWKKPKS+AAPPEILKKEHQIQSYAEVA ILKTTG+HISGIVN
Sbjct: 61  DPPRDEATPSAASAAVIQWKKPKSDAAPPEILKKEHQIQSYAEVANILKTTGSHISGIVN 120

Query: 121 PTQLGRWLQK 127
           PTQLGRWLQK
Sbjct: 121 PTQLGRWLQK 130

[Close]
BLAST of Cla97C05G084880.1 vs. NCBI nr
Match: XP_008438490.1 (PREDICTED: uncharacterized protein LOC103483571 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 7.2e-50
Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0 

Query: 1   MRLHFHNRGLLSAGPSRKRKEPSAPAAP-KAVEPSVLSNRLLAGYMAYEFLTKGTLLGRK 60
           M  HFH+RGLLSAGPS+KRKEPS PA P KA EPSVLSNRLLAGYMAYEFLTKGTL GRK
Sbjct: 1   MSFHFHSRGLLSAGPSKKRKEPSTPAPPNKAGEPSVLSNRLLAGYMAYEFLTKGTLFGRK 60

Query: 61  FDPARADASPSTA--TQWKKPKSEAAPPEILKKEH--QIQSYAEVATILKTTGAHISGIV 120
           FDP R +A+PS+A  +QWKKPK EAAPPEILKKEH  QIQSYAEVA ILKTTG+HISGIV
Sbjct: 61  FDPTRDEATPSSAAVSQWKKPKFEAAPPEILKKEHQNQIQSYAEVANILKTTGSHISGIV 120

Query: 121 NPTQLGRWLQK 127
           NPTQLGRWLQK
Sbjct: 121 NPTQLGRWLQK 131

[Close]
BLAST of Cla97C05G084880.1 vs. NCBI nr
Match: XP_023526927.1 (uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 103/126 (81.75%), Postives = 108/126 (85.71%), Query Frame = 0 

Query: 1   MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKF 60
           M  HFH+RGLL AGPSRKRKE   PAA KA EPSV SNRLLAGYMAYEFLTKGT+LGR+F
Sbjct: 1   MSFHFHSRGLLPAGPSRKRKE---PAALKASEPSVSSNRLLAGYMAYEFLTKGTILGREF 60

Query: 61  DPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQL 120
           +P RA+A PS A QWKK KSEAAPPEILKKEHQIQSY EVATILKTTG HI  IVNPTQL
Sbjct: 61  NPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEIVNPTQL 120

Query: 121 GRWLQK 127
           GRWLQK
Sbjct: 121 GRWLQK 123

[Close]
BLAST of Cla97C05G084880.1 vs. NCBI nr
Match: XP_022924296.1 (uncharacterized protein LOC111431827 [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 4.3e-47
Identity = 102/126 (80.95%), Postives = 107/126 (84.92%), Query Frame = 0 

Query: 1   MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKF 60
           M  HFH+RGLL AGPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F
Sbjct: 1   MSFHFHSRGLLPAGPSRKRKE---PAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREF 60

Query: 61  DPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQL 120
           +P RA+A PS A QWKK KSEAAPPEILKKEHQIQSY EVATILKTTG HI  IVNPTQL
Sbjct: 61  NPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEIVNPTQL 120

Query: 121 GRWLQK 127
           GRWLQK
Sbjct: 121 GRWLQK 123

[Close]
BLAST of Cla97C05G084880.1 vs. NCBI nr
Match: XP_022979583.1 (uncharacterized protein LOC111479265 [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 4.8e-46
Identity = 101/126 (80.16%), Postives = 106/126 (84.13%), Query Frame = 0 

Query: 1   MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKF 60
           M  HFH RGLL  GPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F
Sbjct: 1   MSFHFHIRGLLPPGPSRKRKE---PAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREF 60

Query: 61  DPARADASPSTATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQL 120
           +P +A+A PS A QWKK KSEAAPPEILKKEHQIQSY EVATILKTTGAHI  IVNPTQL
Sbjct: 61  NPGQAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGAHIPEIVNPTQL 120

Query: 121 GRWLQK 127
           GRWLQK
Sbjct: 121 GRWLQK 123

[Close]
BLAST of Cla97C05G084880.1 vs. TrEMBL
Match: tr|A0A0A0L4C1|A0A0A0L4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134830 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-51
Identity = 107/130 (82.31%), Postives = 115/130 (88.46%), Query Frame = 0 

Query: 1   MRLHFHNRGLLSAGPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKF 60
           M  HFH+RGLLSAGPS+KRKEPS P+A KA EPSV SNRLLAGYMAYEFLTKGTL GRKF
Sbjct: 1   MSFHFHSRGLLSAGPSKKRKEPSTPSASKAGEPSVSSNRLLAGYMAYEFLTKGTLFGRKF 60

Query: 61  DPARADASPSTAT----QWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVN 120
           DP R +A+PS A+    QWKKPKS+AAPPEILKKEHQIQSYAEVA ILKTTG+HISGIVN
Sbjct: 61  DPPRDEATPSAASAAVIQWKKPKSDAAPPEILKKEHQIQSYAEVANILKTTGSHISGIVN 120

Query: 121 PTQLGRWLQK 127
           PTQLGRWLQK
Sbjct: 121 PTQLGRWLQK 130

[Close]
BLAST of Cla97C05G084880.1 vs. TrEMBL
Match: tr|A0A1S3AWH5|A0A1S3AWH5_CUCME (uncharacterized protein LOC103483571 OS=Cucumis melo OX=3656 GN=LOC103483571 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.7e-50
Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0 

Query: 1   MRLHFHNRGLLSAGPSRKRKEPSAPAAP-KAVEPSVLSNRLLAGYMAYEFLTKGTLLGRK 60
           M  HFH+RGLLSAGPS+KRKEPS PA P KA EPSVLSNRLLAGYMAYEFLTKGTL GRK
Sbjct: 1   MSFHFHSRGLLSAGPSKKRKEPSTPAPPNKAGEPSVLSNRLLAGYMAYEFLTKGTLFGRK 60

Query: 61  FDPARADASPSTA--TQWKKPKSEAAPPEILKKEH--QIQSYAEVATILKTTGAHISGIV 120
           FDP R +A+PS+A  +QWKKPK EAAPPEILKKEH  QIQSYAEVA ILKTTG+HISGIV
Sbjct: 61  FDPTRDEATPSSAAVSQWKKPKFEAAPPEILKKEHQNQIQSYAEVANILKTTGSHISGIV 120

Query: 121 NPTQLGRWLQK 127
           NPTQLGRWLQK
Sbjct: 121 NPTQLGRWLQK 131

[Close]
BLAST of Cla97C05G084880.1 vs. TrEMBL
Match: tr|A0A2I4DL98|A0A2I4DL98_9ROSI (uncharacterized protein LOC108981274 OS=Juglans regia OX=51240 GN=LOC108981274 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26
Identity = 78/130 (60.00%), Postives = 91/130 (70.00%), Query Frame = 0 

Query: 10  LLSAGPSRKRKE--------PSAPAAPKAVEPS--VLSNRLLAGYMAYEFLTKGTLLGRK 69
           +L+ G SRKRKE        PSAPA   A +P   + SNRLLAGYMAYEFL KGTL G+K
Sbjct: 8   ILTPGASRKRKEREVLYSLKPSAPATAAASKPGEPLSSNRLLAGYMAYEFLKKGTLFGQK 67

Query: 70  FDPARADASP----STATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIV 126
           FDPARA+A P    S  ++  KP +EAA   + KKEH  QSYAEVA+ILKT GAHI G+V
Sbjct: 68  FDPARAEAVPLASSSAESKRWKPVAEAAAASV-KKEH--QSYAEVASILKTDGAHIPGVV 127

[Close]
BLAST of Cla97C05G084880.1 vs. TrEMBL
Match: tr|W9QPT9|W9QPT9_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008680 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.4e-25
Identity = 80/149 (53.69%), Postives = 94/149 (63.09%), Query Frame = 0 

Query: 6   HNRGLLSAGPSRKRKE-----------PSAPA----------APKAVEPSVLSNRLLAGY 65
           H+R +L+ GP+RKRKE           PSA A          A K  +  + SNRLLAGY
Sbjct: 4   HSRRILTPGPTRKRKEREASSFYSSLKPSAQAKAQAAVKLDQAGKRADEPMSSNRLLAGY 63

Query: 66  MAYEFLTKGTLLGRKFDPARADASP-----STATQWKKPKSEAAPPEILK---KEHQIQS 125
           MAYEFLTKGTL G+KFDPARADA P      ++ + K+ K E A P   K   KEH  +S
Sbjct: 64  MAYEFLTKGTLFGQKFDPARADAFPVSGGAGSSAELKRLKPEPAEPSGKKKVAKEH--ES 123

[Close]
BLAST of Cla97C05G084880.1 vs. TrEMBL
Match: tr|A0A067L783|A0A067L783_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02363 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25
Identity = 80/143 (55.94%), Postives = 95/143 (66.43%), Query Frame = 0 

Query: 3   LHFHNRGLLSAGPSRKRKE-----PSAP---------AAPKAVEPSVLSNRLLAGYMAYE 62
           + +H R +L+ G SRKRKE     P  P          A KA E SV SNRLLAGYMAYE
Sbjct: 1   MSYHPRRILTPGASRKRKERETFYPFKPFNSAQLGGKPALKA-EKSVSSNRLLAGYMAYE 60

Query: 63  FLTKGTLLGRKFDPARADASP---STATQWKKPKSEAAPPEI---LKKEHQIQSYAEVAT 122
           +LTKGTL G+KFDPARA+A P     + +WKK   +  PPE+    +KEH  QSYAEVA+
Sbjct: 61  YLTKGTLFGQKFDPARAEAVPLAGGGSAEWKKRGMK--PPEVQPGWRKEH--QSYAEVAS 120

Query: 123 ILKTTGAHISGIVNPTQLGRWLQ 126
           ILKT GAHI GIVNPTQL +W+Q
Sbjct: 121 ILKTDGAHIPGIVNPTQLAKWIQ 138

[Close]
BLAST of Cla97C05G084880.1 vs. TAIR10
Match: AT5G44060.1 (unknown protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16
Identity = 47/104 (45.19%), Postives = 64/104 (61.54%), Query Frame = 0 

Query: 22  PSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSE 81
           P+  A     EP V SN+LLAGY+A+EFL  GTL G  ++P +A A P T TQ   P+  
Sbjct: 48  PTTTATVALAEP-VCSNQLLAGYLAHEFLNNGTLFGELWNPTKAQAGPLT-TQSIDPRKN 107

Query: 82  AAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLGRWLQ 126
               +I   +H+ + Y EVA IL+  G H+ GIVNP+QL R+L+
Sbjct: 108 KPSHDIEPSDHKRRRYVEVANILRVDGTHLPGIVNPSQLARFLK 149

[Close]
BLAST of Cla97C05G084880.1 vs. TAIR10
Match: AT3G23440.1 (embryo sac development arrest 6)

HSP 1 Score: 78.2 bits (191), Expect = 4.1e-15
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 0 

Query: 14  GPSRKRKEPSAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTAT 73
           G SRKRK+  +      +  +   N LLAGYMA+E+LT GT+LGRK     A+  P  + 
Sbjct: 10  GASRKRKDTESD-----LREAATPNWLLAGYMAHEYLTCGTMLGRKLYSGWAEVGPLVS- 69

Query: 74  QWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLGRWLQ 126
                    +P +  + +   QSY+EVA++ KT G H+ G+VNPTQL +W+Q
Sbjct: 70  --------PSPLQSREVKKARQSYSEVASVFKTDGNHVPGVVNPTQLAKWIQ 107

[Close]
BLAST of Cla97C05G084880.1 vs. TAIR10
Match: AT1G04000.1 (unknown protein)

HSP 1 Score: 67.4 bits (163), Expect = 7.2e-12
Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 0 

Query: 23  SAPAAPKAVEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARADASPSTATQWKKPKSEA 82
           S  ++  A EP   +  +LAGY+++E+LT+GTL G +++ ARA A  S      KP    
Sbjct: 55  SKKSSTAAAEPIGSNQLMLAGYLSHEYLTQGTLFGEQWNQARAQAESSKI----KPSHTV 114

Query: 83  APPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLGRWLQ 126
            P E  + E + + Y EVA +L++ GA + GIVNP QL R+L+
Sbjct: 115 EPAE--ECEPKRKRYREVANLLRSDGAQLPGIVNPAQLARFLK 151

The following BLAST results are available for this feature:
BLAST of Cla97C05G084880.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011650922.12.9e-5182.31PREDICTED: uncharacterized protein LOC105434827 [Cucumis sativus] >KGN56835.1 hy... [more]
XP_008438490.17.2e-5083.21PREDICTED: uncharacterized protein LOC103483571 [Cucumis melo][more]
XP_023526927.11.1e-4781.75uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo][more]
XP_022924296.14.3e-4780.95uncharacterized protein LOC111431827 [Cucurbita moschata][more]
XP_022979583.14.8e-4680.16uncharacterized protein LOC111479265 [Cucurbita maxima][more]
BLAST of Cla97C05G084880.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L4C1|A0A0A0L4C1_CUCSA1.9e-5182.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134830 PE=4 SV=1[more]
tr|A0A1S3AWH5|A0A1S3AWH5_CUCME4.7e-5083.21uncharacterized protein LOC103483571 OS=Cucumis melo OX=3656 GN=LOC103483571 PE=... [more]
tr|A0A2I4DL98|A0A2I4DL98_9ROSI6.2e-2660.00uncharacterized protein LOC108981274 OS=Juglans regia OX=51240 GN=LOC108981274 P... [more]
tr|W9QPT9|W9QPT9_9ROSA2.4e-2553.69Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008680 PE=4 SV=1[more]
tr|A0A067L783|A0A067L783_JATCU3.1e-2555.94Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02363 PE=4 SV=1[more]
BLAST of Cla97C05G084880.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G084880.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G44060.11.3e-1645.19unknown protein[more]
AT3G23440.14.1e-1540.18embryo sac development arrest 6[more]
AT1G04000.17.2e-1239.81unknown protein[more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C05G084880Cla97C05G084880gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C05G084880.1.exon.1Cla97C05G084880.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C05G084880.1.CDS.1Cla97C05G084880.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C05G084880.1Cla97C05G084880.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR34657FAMILY NOT NAMEDcoord: 17..126
NoneNo IPR availablePANTHERPTHR34657:SF4EMBRYO SAC DEVELOPMENT ARREST 6 PROTEINcoord: 17..126