Cla97C05G080400.1 (mRNA) Watermelon (97103) v2

NameCla97C05G080400.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 531547 .. 531812 (-)
Sequence length198
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAACCCAAAAGAAGGAAAAGAAGAAAAAGGTTTCATGGTAATGTGATTCTTATCGACTCCCTGCATAAAGTACCATCAGTATATAAGAATTCTGATAGAATGCAGACTGCAAGTACACGAAGAAAAATTAGAAAATGCTTCAAAAAACGACCTTTTGACGCTTCTGATAAAGGTAATAGACCAGGAAGTAACGGTGAAGCTGAGAAGTCAAACCATATAGTTTGTGTACTACTTGGCATCAGAAACTCGGTATATGATTAA

mRNA sequence

ATGGCTAACCCAAAAGAAGGAAAAGAAGAAAAAGGTTTCATGACTGCAAGTACACGAAGAAAAATTAGAAAATGCTTCAAAAAACGACCTTTTGACGCTTCTGATAAAGGTAATAGACCAGGAAGTAACGGTGAAGCTGAGAAGTCAAACCATATAGTTTGTGTACTACTTGGCATCAGAAACTCGGTATATGATTAA

Coding sequence (CDS)

ATGGCTAACCCAAAAGAAGGAAAAGAAGAAAAAGGTTTCATGACTGCAAGTACACGAAGAAAAATTAGAAAATGCTTCAAAAAACGACCTTTTGACGCTTCTGATAAAGGTAATAGACCAGGAAGTAACGGTGAAGCTGAGAAGTCAAACCATATAGTTTGTGTACTACTTGGCATCAGAAACTCGGTATATGATTAA

Protein sequence

MANPKEGKEEKGFMTASTRRKIRKCFKKRPFDASDKGNRPGSNGEAEKSNHIVCVLLGIRNSVYD
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C05G080400Cla97C05G080400gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C05G080400.1.CDS.2Cla97C05G080400.1.CDS.2CDS
Cla97C05G080400.1.CDS.1Cla97C05G080400.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C05G080400.1.exon.2Cla97C05G080400.1.exon.2exon
Cla97C05G080400.1.exon.1Cla97C05G080400.1.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C05G080400.1Cla97C05G080400.1-proteinpolypeptide


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..47