Cla97C03G067030.1 (mRNA) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTCTTGCTACAATCCTCTGAACGTTAGCTATCCGCTTCTGGTGACCAATTCTTCCCAGGAGTTAAAGAGCACCAAGCATCCTTACTTGGTAAATTGCCTTTTCCTTGATATTCTCAGATTGATACTTACTTGATTCAAATAATACCCTTCATTCATGTGAGCTCTTTCATCGGGCAAATATGGAATGCAATAGTTCCTCAGTTTGAAGTTGCTTTTTCTTTGATATATTTTTTTTTGGTCCTTTGGGGTACTGAGATTCTTTAGTAACTGTATTCTTCTTTTTAAAAGTCTGACATCAAAATTTTCCATATGGAAGGAGATATGGACATGTTTACGTTCTCACCCATATTCATATATCGTGCAGAATTGTGCATTTGAAATTCTTCAGTTTTTACAATATGTTTATCACTATTTAAAGACAATAGACTTTTCTTACAACAGATTCAATTTAACATTATAAATAAAAAGTATCTGAGATTTTTGTTTTTCTTCTTCTCTTCTTTTTTTTTTTTTTTGATGAAACTCTACCAAAGAATTGTTGTCATTATTAATTCCTATTTCACAACCATTGCCAGATCTTGCAAAATTGTCAATATTACTCTTCAAGCAGAAGACCTTTGGGTGAGAACATTTTATTTGATACTGACGCGTGTTTGTTCTTTGCAGCATCAGAGTAAGTTGCATAAGAGAAGCTCTGATGTAACCACAAGAGGAATGAAAGTCTCTGCTTATTATGGCTTGAGGACACCCCCCTATGAACTTGTAAGTCATCAACCTCATAATGTGCTTATTTTGCAACTAAAATTCCATGTTTTAGGGGTTGTTTCTTGCAGATATTTGCTTCTTGCCCATAGAGTTCACTTGATGGTCCCAGATATTTAGACATATCTTTTTTAGAAGCAAGCATAGCAAAGATCTTCAAAGCCGGAGTTGCGAAATTACGCTTTATGTTTCTCTATTTACTTTTAAGAGTCTTGACTCAAATACCATTCCATGTCTTGCCTAAATTTGAAATTGTGTCGTTCCATTACAGTATTCCCTCATACTTTTGGTTCTTGAAACTTTTTTCTGTAAAAGATTACTGAGACTCACTGAAACAGGTTTAATAGCTAGTAAACATTATTTGAACCCACATAAAGCAGGTTTAATATACTGGCATAGAGTGGCTTTAGTAATTCTTGTCTTCCTTCAAAATTGGCAGCTAGACGTGTGAGAGGTCAACTAAGGTGAGGTGACATCAATAAGGCACCTATCTTTCTTCTTCTTCTTCTTCTTCCTCTCTCTCTCTCTCACACATGAATTTTTTTTATAGTTTTTGATATATTGTAAACATAATCTCAATCACTCTTATGTATTTACATTTTTGCGTATTGGGGTCCTTTAAAATGCCCAATTTTTGGGGTGCATTGCTTATCCTGTCTCTTGTAGCTAGTTTTTTTGTGGGTATAGTCATTGTCGGACCATAGATTCATAGGAAGCCTACAAATTTCTACCAAACTGATTATAAATTTGCCACAATTGCAGCATTACTGGTAAGAAATGGATACATCTATAAACTTTGTAACAGCACTATGTTTTATTTTCTTCTCTACTTTCAGGATGCTTTAGAACCATATATGAGCCGGAGGACATTGGAGGTTCACTGGGGTAAACATCATCGTAATTACGTTGAAGGTTTGAACAAACAACTGAGCCAAAATGATATTCTATATGGCCACACTTTGGACGAACTTCTCAAAGTAACATATAACAATGGGAATCCTTTACCTGAGTTTAACAATGCGGCCCAGGTACTTCAATGTTAATCCATGGCATACTTCAAATTACGAGGGCTAAAACTAAACCTTTCTGATATTCTGATTGACTCCTTCATGTAAGTCTTTTAGTTGAGTTCAAGCTATTTAGCACATGATACAATTTCTATCACTGATAAACCATGATTCAAACTTCAGCATGCAGCTTTTTCAGAAGCTACTTGACTTCAACTAATTGTTCCCTTTATCTTAATAATAAAGAGATGAGATGATTTTTATTTTGTTTTAATATTGGGACGGAAAGGTTTCTTTAAAATGTGATTACGAAATGAAGTGTTCAATACTCTAAAAGGAAAAATAAAATAAAAATAAAGGTGTATAAGTAGAACAATCCGTCCTATTAGTTCTTACATATGGTAACTGGGGTGGCTATGAAATAGAAATTGAATGCTGAATAGCATACTTCTGATAATAGCAGGTCATATACTTTGAGATCATTAATGCGCCATCTTACATGCAGAGCTATTATTCTTGATAAGAAAATTTCCAAAGCTATCTGAGCTTGGCTTTAGGGTATTTATATCACTTAAAGGAGATACCAGCTCTGCCTAATTTTGCCTGATTGCTGAAATTTCAAGACTGTCTTTTTGTCCCCTTTTTCTTTACACAAAACCATCCCCTATTTGCTAAAGTCTCGAGACATCTCCAGATCAGTGGTGGCCATTGCTGGACATGTTCAACCTTTCTTGAGGTGCATGTCTTCTGGTCCAACATTGTCTTTTTTTTTTTTTTTAAATGGAAACAAAGCTTTTCATTGAAGAAATGAAAAGAGGCTAATGCTCAGAGTACAATGAAATGTAAAAAGCAAAGTAAGACAAATACAAAAAAATAAAAATAAAACAAATACAAAAAAAAAAAAAAAAAAACCAAAGCAGGGAGTTATTCAGAAAATTAACACAAATACAAAACAAATACAACCCAAGATAGAACAATTGGCTCTTTGAATGAAAAATCCACTGAAGCTCGACTTGATTAATTGGAGAACCAGTGAACCACAATGGTTTAAGACGAAACCAAGTAGAAAAATGCACCAAGAACTTGGAGAGGGGCAACAGAAAAGTCCAGGCTCCAACTATGACAACTTGAAGACAAATCCACCCTAAAATTTTAGGCCTCCAATAACCAGCTTCTAAAAAATGATCAAGCAAGAAAACAATCCAGCAAGGAGATCTGTCACATTTTTCCTTGAATAAAAGGCAAAACCATGACTCATTGTCTAGAACAAATACAAAGTGAATGTTCTGTGAGTGTGACGTTGTATGGTTAAAAGTCTTTTTATTTTTACCTTGGATGGATACTCAGATGCATTTTTATTTCTGATCTGACAAACTTAGTTTACTCTTACGTTACCCTATTGGAGGAGTTTACTTTTTGTGCTATAATATTTTGTTTAGTTTGTTTCATGGGCCATTCTTTTCTGTAAATCCTCTCTTTATACTTTTATCAATGATTGTTGGTTTCTTGTCAAATATCTGTATGTTCCTGTGCATTCGACATCCTTGTATGAGAAATGAAATTGATTTTTTTTTTCTCTTCAGGACAGAATGAATCTGGAAAAAGTATGTTTGTCGATTTTCTAGTAATGTGCACTGTAAAATTTTGGGCGGTGCTAGATACTTAAGTCATAAAAATGAAAAAAGATGTTGGCTCCTTACCTTTGTGTATGTTCAGGTCTGGAATCACGACTTCTTTTGGGAATCCATGCAACCTGGAGGTGGAAACATGCCCAAACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTCATCAATTTCAGGGACAAGTTTATACAAGCGTCTCTTTCACTCTTTGGTTCTGGCTGGGTTTGGCTTGTTTGTAAGTTTTCAGACTTTGGTTAAACATTTTTTTAATAAGTGCTTTTTTAACACCTTTATAATAAGTACTTTTTGGTTGAAAGAACTATCTGTATTGAATCACCCAATTTGCAAATGGTGCCAGCTTGTTCTCTCTCTCTCTCTCTCTCTTCTTTTCCTTATTTTTCCTTCATTTTTTTCCCTTTTATAAAAGCTGTTGCAGATAGCTCAATCAGAAAATCTGCAACCATTTATGGTTAATGATCGAAATGCAAACTTCGTTATCTAGTTATTATCTTCTTTCTACTACAATTTCCCTGTTCAACTCTATGATCTCAAAAGCTTGACTAAATATTGTGCTTATCGTTTTTCAATATTCAGATTGACGACGTAGTTCTGTTTTATGAACGATCATTTGACACAGTCTACTTAGTTATCCTGAATGTTGTTCATTGCAGTGAAGAGACAAGAAAAACGACTCACTGTGATCACAACTTCGAATGCGATAAGCCCACTTCTCTGGGATGACATTGTAAGTCAATGCTCCATTTTGTGTACAAGGTTCTTTTATTCTCCGAAATTTGATTCTCCATATTTTGTTGTGCAGCCAATCATCTGCTTGGATATGTGGGAGGTATCAAATACTTTTCTACCTTCTTCAAATATTTGTTTTGTTTCTTCATTTGAACAGATCATATATCATACATGATAACATTTGATTGTTTTTTTTTCCTTTCCCTCCAGCATGCTTACTATCTGGATTACAAGGTATGAAGAAACTCAACTCATTTTGGCCCCGTACTTCCACATGTTCAAATTTAATCATCGTAGTCTCAATGAATCTTAAAGTTAGTTCTTATGGTTAGTTTGAAATTAGCTTTTACTGATAAAAAAATAAAAATAAAAAAATCAGGTAAAGATACCATGTGAATACTAAAATTTATATAGACTGAAGACTAATAGAGAGACCTTTTGTTTTGTTTTCTTTTTTTCTTTTTTGGAAAAGCTAACTATAAACTAATAGTTGGAACTGATTTTTAAGATTTATTAAAAGACTGAATTTGGACTTTTAAAATTACTCAACCATGATGGACCAACATATTTCAATCAAAATGGTATTTTAACCTTATTTATTTTACTAATGAAGCGTCCACACATTATATATGCTTGTAGCCTACTTTCACTAATTTGTTCGAAGGTTTTGTCTAAAAAAAGGCCAATTTTGGGAGGCCTGGATACCTGTATTATCAAGTTATTTAAGTGAGATTTCTGTGATTGATTTTATTTGTATCTTACCTTGACACAGAATGATAAAAAAGAGTATGTCAATGTGTTCATGGACCATCTTGTATCATGGAATGCAGCGTTGGGGCGTATGGCCCGAGCAGAGTGTTTTGTGAATCTAGGTGAGCCGAAAATTCCCGTAGCGTAA ATGATTTCTTGCTACAATCCTCTGAACGTTAGCTATCCGCTTCTGGTGACCAATTCTTCCCAGGAGTTAAAGAGCACCAAGCATCCTTACTTGCATCAGAGTAAGTTGCATAAGAGAAGCTCTGATGTAACCACAAGAGGAATGAAAGTCTCTGCTTATTATGGCTTGAGGACACCCCCCTATGAACTTGATGCTTTAGAACCATATATGAGCCGGAGGACATTGGAGGTTCACTGGGGTAAACATCATCGTAATTACGTTGAAGGTTTGAACAAACAACTGAGCCAAAATGATATTCTATATGGCCACACTTTGGACGAACTTCTCAAAGTAACATATAACAATGGGAATCCTTTACCTGAGTTTAACAATGCGGCCCAGGTCTGGAATCACGACTTCTTTTGGGAATCCATGCAACCTGGAGGTGGAAACATGCCCAAACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTCATCAATTTCAGGGACAAGTTTATACAAGCGTCTCTTTCACTCTTTGGTTCTGGCTGGGTTTGGCTTGTTTTGAAGAGACAAGAAAAACGACTCACTGTGATCACAACTTCGAATGCGATAAGCCCACTTCTCTGGGATGACATTCCAATCATCTGCTTGGATATGTGGGAGCATGCTTACTATCTGGATTACAAGAATGATAAAAAAGAGTATGTCAATGTGTTCATGGACCATCTTGTATCATGGAATGCAGCGTTGGGGCGTATGGCCCGAGCAGAGTGTTTTGTGAATCTAGGTGAGCCGAAAATTCCCGTAGCGTAA ATGATTTCTTGCTACAATCCTCTGAACGTTAGCTATCCGCTTCTGGTGACCAATTCTTCCCAGGAGTTAAAGAGCACCAAGCATCCTTACTTGCATCAGAGTAAGTTGCATAAGAGAAGCTCTGATGTAACCACAAGAGGAATGAAAGTCTCTGCTTATTATGGCTTGAGGACACCCCCCTATGAACTTGATGCTTTAGAACCATATATGAGCCGGAGGACATTGGAGGTTCACTGGGGTAAACATCATCGTAATTACGTTGAAGGTTTGAACAAACAACTGAGCCAAAATGATATTCTATATGGCCACACTTTGGACGAACTTCTCAAAGTAACATATAACAATGGGAATCCTTTACCTGAGTTTAACAATGCGGCCCAGGTCTGGAATCACGACTTCTTTTGGGAATCCATGCAACCTGGAGGTGGAAACATGCCCAAACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTCATCAATTTCAGGGACAAGTTTATACAAGCGTCTCTTTCACTCTTTGGTTCTGGCTGGGTTTGGCTTGTTTTGAAGAGACAAGAAAAACGACTCACTGTGATCACAACTTCGAATGCGATAAGCCCACTTCTCTGGGATGACATTCCAATCATCTGCTTGGATATGTGGGAGCATGCTTACTATCTGGATTACAAGAATGATAAAAAAGAGTATGTCAATGTGTTCATGGACCATCTTGTATCATGGAATGCAGCGTTGGGGCGTATGGCCCGAGCAGAGTGTTTTGTGAATCTAGGTGAGCCGAAAATTCCCGTAGCGTAA MISCYNPLNVSYPLLVTNSSQELKSTKHPYLHQSKLHKRSSDVTTRGMKVSAYYGLRTPPYELDALEPYMSRRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGWVWLVLKRQEKRLTVITTSNAISPLLWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAALGRMARAECFVNLGEPKIPVA
BLAST of Cla97C03G067030.1 vs. NCBI nr
Match: APO14281.1 (superoxide dismutase 3 [Luffa aegyptiaca]) HSP 1 Score: 527.7 bits (1358), Expect = 2.3e-146 Identity = 247/267 (92.51%), Postives = 258/267 (96.63%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. NCBI nr
Match: XP_022990032.1 (superoxide dismutase [Fe] 3, chloroplastic [Cucurbita maxima] >XP_022990033.1 superoxide dismutase [Fe] 3, chloroplastic [Cucurbita maxima]) HSP 1 Score: 524.6 bits (1350), Expect = 1.9e-145 Identity = 245/267 (91.76%), Postives = 258/267 (96.63%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. NCBI nr
Match: XP_023523987.1 (superoxide dismutase [Fe] 3, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 524.2 bits (1349), Expect = 2.5e-145 Identity = 245/267 (91.76%), Postives = 257/267 (96.25%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. NCBI nr
Match: AWW05332.1 (superoxide dismutase [Fe] 3 [Cucurbita pepo]) HSP 1 Score: 524.2 bits (1349), Expect = 2.5e-145 Identity = 245/267 (91.76%), Postives = 258/267 (96.63%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. NCBI nr
Match: NP_001315382.1 (superoxide dismutase [Fe] 3, chloroplastic [Cucumis melo] >ALO62043.1 superoxide dismutase 2 [Cucumis melo]) HSP 1 Score: 521.5 bits (1342), Expect = 1.6e-144 Identity = 244/267 (91.39%), Postives = 255/267 (95.51%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TrEMBL
Match: tr|A0A1L5JHX4|A0A1L5JHX4_LUFAE (Superoxide dismutase 3 OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 1.5e-146 Identity = 247/267 (92.51%), Postives = 258/267 (96.63%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TrEMBL
Match: tr|A0A0S2LKX3|A0A0S2LKX3_CUCME (Superoxide dismutase 2 OS=Cucumis melo OX=3656 PE=2 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-144 Identity = 244/267 (91.39%), Postives = 255/267 (95.51%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TrEMBL
Match: tr|A0A1S3BQU3|A0A1S3BQU3_CUCME (superoxide dismutase [Fe] 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492201 PE=4 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 3.5e-143 Identity = 241/267 (90.26%), Postives = 255/267 (95.51%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TrEMBL
Match: tr|A0A0A0LWI3|A0A0A0LWI3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G571850 PE=4 SV=1) HSP 1 Score: 515.0 bits (1325), Expect = 1.0e-142 Identity = 241/267 (90.26%), Postives = 254/267 (95.13%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TrEMBL
Match: tr|A0A2I4ECZ0|A0A2I4ECZ0_9ROSI (superoxide dismutase [Fe] 3, chloroplastic OS=Juglans regia OX=51240 GN=LOC108988456 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 4.0e-115 Identity = 198/264 (75.00%), Postives = 225/264 (85.23%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. Swiss-Prot
Match: sp|Q9FMX0|SODF3_ARATH (Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD3 PE=1 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 5.8e-109 Identity = 183/267 (68.54%), Postives = 222/267 (83.15%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. Swiss-Prot
Match: sp|Q5VSB7|SODF2_ORYSJ (Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0143000 PE=2 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 4.2e-91 Identity = 153/222 (68.92%), Postives = 184/222 (82.88%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. Swiss-Prot
Match: sp|Q9LU64|SODF2_ARATH (Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD2 PE=1 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 2.8e-63 Identity = 110/219 (50.23%), Postives = 149/219 (68.04%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. Swiss-Prot
Match: sp|P28759|SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max OX=3847 GN=SODB PE=2 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 5.3e-62 Identity = 108/227 (47.58%), Postives = 155/227 (68.28%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. Swiss-Prot
Match: sp|P22302|SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia OX=4092 GN=SODB PE=2 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 3.4e-61 Identity = 104/200 (52.00%), Postives = 142/200 (71.00%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TAIR10
Match: AT5G23310.1 (Fe superoxide dismutase 3) HSP 1 Score: 395.2 bits (1014), Expect = 3.2e-110 Identity = 183/267 (68.54%), Postives = 222/267 (83.15%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TAIR10
Match: AT5G51100.1 (Fe superoxide dismutase 2) HSP 1 Score: 243.4 bits (620), Expect = 1.6e-64 Identity = 110/219 (50.23%), Postives = 149/219 (68.04%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TAIR10
Match: AT4G25100.1 (Fe superoxide dismutase 1) HSP 1 Score: 227.3 bits (578), Expect = 1.2e-59 Identity = 101/205 (49.27%), Postives = 143/205 (69.76%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TAIR10
Match: AT3G10920.1 (manganese superoxide dismutase 1) HSP 1 Score: 115.2 bits (287), Expect = 6.4e-26 Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 0
BLAST of Cla97C03G067030.1 vs. TAIR10
Match: AT3G56350.1 (Iron/manganese superoxide dismutase family protein) HSP 1 Score: 113.2 bits (282), Expect = 2.4e-25 Identity = 71/195 (36.41%), Postives = 101/195 (51.79%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
|