Cla97C03G063550.1 (mRNA) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G063550.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	cytochrome c-type biogenesis protein CcmE
Location	Cla97Chr03 : 26279233 .. 26280012 (-)
Sequence length	780

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACAAATCTCGCTCTCCGACTTAGATCACGCCTCCTTTTGCAGTCCTCAGCTCGTTTCCGCTCCACTTTTCATCACATTCAATCCCCCCACTTCCCCAAATCGTCCCCTCTTATCTCGTCTGCACTTTCTGATCTTCGTCGACTTCCCGATGACCCCATCTTCAATCTATCTGGATTTCGATTCCTCTCAACTGCACGGCGGAATCTGACCCGTCCCAAGCAGGTCGACATCGGAGCTCGGGCCAGGCAACTCCAGACGCGGCGGCTTTGGACCTACGCTCTGACTTTCAGCTGCATCGCGGGGTTCATCGTCATCGTCCTCAGTAATTTTCAAGAGCATCTGATGTTCTATGTGACGCCGACCGATGCGCTCGAGAAATACTCTGCGAATCCCTCGAAGAACAAGTTTCGTCTCGGTGGTTTGGTTCTTGAAGGCAGTGTAGTGCATCCGGCATCGTCTTCTCAAATGGAGTTCGTGATAACTGATTTGATCACCGATATATTGGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTGGTGGTGGAAGGTTTTGTTAAGCCATTTACCGATGAGATAAGGAATGAGGTCTCTACGAAGAGTGTTTCGGGAAAAGCGAGAAGTGGGGAATATTATTTTTCGGCTACTGAGGTTTTGGCAAAGCACGATGAGAAGTATATGCCTGCAGAGGTTGCGGCGGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAGTTGGGGGTGAACCACGCCTGA

mRNA sequence

ATGGCTACAAATCTCGCTCTCCGACTTAGATCACGCCTCCTTTTGCAGTCCTCAGCTCGTTTCCGCTCCACTTTTCATCACATTCAATCCCCCCACTTCCCCAAATCGTCCCCTCTTATCTCGTCTGCACTTTCTGATCTTCGTCGACTTCCCGATGACCCCATCTTCAATCTATCTGGATTTCGATTCCTCTCAACTGCACGGCGGAATCTGACCCGTCCCAAGCAGGTCGACATCGGAGCTCGGGCCAGGCAACTCCAGACGCGGCGGCTTTGGACCTACGCTCTGACTTTCAGCTGCATCGCGGGGTTCATCGTCATCGTCCTCAGTAATTTTCAAGAGCATCTGATGTTCTATGTGACGCCGACCGATGCGCTCGAGAAATACTCTGCGAATCCCTCGAAGAACAAGTTTCGTCTCGGTGGTTTGGTTCTTGAAGGCAGTGTAGTGCATCCGGCATCGTCTTCTCAAATGGAGTTCGTGATAACTGATTTGATCACCGATATATTGGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTGGTGGTGGAAGGTTTTGTTAAGCCATTTACCGATGAGATAAGGAATGAGGTCTCTACGAAGAGTGTTTCGGGAAAAGCGAGAAGTGGGGAATATTATTTTTCGGCTACTGAGGTTTTGGCAAAGCACGATGAGAAGTATATGCCTGCAGAGGTTGCGGCGGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAGTTGGGGGTGAACCACGCCTGA

Coding sequence (CDS)

ATGGCTACAAATCTCGCTCTCCGACTTAGATCACGCCTCCTTTTGCAGTCCTCAGCTCGTTTCCGCTCCACTTTTCATCACATTCAATCCCCCCACTTCCCCAAATCGTCCCCTCTTATCTCGTCTGCACTTTCTGATCTTCGTCGACTTCCCGATGACCCCATCTTCAATCTATCTGGATTTCGATTCCTCTCAACTGCACGGCGGAATCTGACCCGTCCCAAGCAGGTCGACATCGGAGCTCGGGCCAGGCAACTCCAGACGCGGCGGCTTTGGACCTACGCTCTGACTTTCAGCTGCATCGCGGGGTTCATCGTCATCGTCCTCAGTAATTTTCAAGAGCATCTGATGTTCTATGTGACGCCGACCGATGCGCTCGAGAAATACTCTGCGAATCCCTCGAAGAACAAGTTTCGTCTCGGTGGTTTGGTTCTTGAAGGCAGTGTAGTGCATCCGGCATCGTCTTCTCAAATGGAGTTCGTGATAACTGATTTGATCACCGATATATTGGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTGGTGGTGGAAGGTTTTGTTAAGCCATTTACCGATGAGATAAGGAATGAGGTCTCTACGAAGAGTGTTTCGGGAAAAGCGAGAAGTGGGGAATATTATTTTTCGGCTACTGAGGTTTTGGCAAAGCACGATGAGAAGTATATGCCTGCAGAGGTTGCGGCGGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAGTTGGGGGTGAACCACGCCTGA

Protein sequence

MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNLSGFRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKKKIEEGELGVNHA

Homology

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BLAST of Cla97C03G063550.1 vs. NCBI nr
Match: XP_004139025.1 (PREDICTED: uncharacterized protein LOC101211081 [Cucumis sativus] >KGN66477.1 hypothetical protein Csa_1G613490 [Cucumis sativus])

HSP 1 Score: 471.1 bits (1211), Expect = 2.5e-129
Identity = 238/259 (91.89%), Postives = 251/259 (96.91%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNLSG 60
           MATNLALRLRSRLLLQSS+RFR+TFH  QSPH PKSSPLI+SALSDLRR+P++PIFNLSG
Sbjct: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60

Query: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRF STARRNLTRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEK+SANPSKNKFRLGGLVLEGSV HPASSSQMEFVITDLITD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KPFTDEIRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKN+KKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

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BLAST of Cla97C03G063550.1 vs. NCBI nr
Match: XP_008450439.1 (PREDICTED: cytochrome c-type biogenesis protein CcmE [Cucumis melo])

HSP 1 Score: 468.4 bits (1204), Expect = 1.6e-128
Identity = 237/259 (91.51%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNLSG 60
           MATNLA RLRSRLLLQSS+RFR+TFH IQSPH PKSSPLISSALSDLRR+PD+PIFNLSG
Sbjct: 1   MATNLAFRLRSRLLLQSSSRFRTTFHQIQSPHIPKSSPLISSALSDLRRIPDNPIFNLSG 60

Query: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRF STARRNLTRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEK+SANP+KNKFRLGGLVLEGSV HPASSSQMEFVITDLITD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPAKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KPFTDEIRNE+STKSVS KARS +YYFSA EVLAKHDEKYMPAEV A
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSEKARSEKYYFSAIEVLAKHDEKYMPAEVGA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKN+KKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

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BLAST of Cla97C03G063550.1 vs. NCBI nr
Match: XP_022154075.1 (uncharacterized protein LOC111021418 [Momordica charantia])

HSP 1 Score: 454.9 bits (1169), Expect = 1.8e-124
Identity = 237/259 (91.51%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNLSG 60
           MATNLALRLRS+LLL+S+ RF+STF HI +P   KSS LIS  LSD RRLPD P+F+ SG
Sbjct: 1   MATNLALRLRSQLLLRST-RFQSTFRHIPAPPISKSSSLISPPLSDFRRLPDVPVFSFSG 60

Query: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV
Sbjct: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASS QMEFVITDLITDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSPQMEFVITDLITDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGFVKPFTDEIR EVSTKSVSGKARSG+YYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFVKPFTDEIRKEVSTKSVSGKARSGDYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELGVNHA
Sbjct: 241 AIEKNKKKIEEGELGVNHA 258

[Close]

BLAST of Cla97C03G063550.1 vs. NCBI nr
Match: XP_022960773.1 (uncharacterized protein LOC111461474 [Cucurbita moschata])

HSP 1 Score: 453.0 bits (1164), Expect = 6.9e-124
Identity = 231/259 (89.19%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNLSG 60
           MA+NLA RLRS LLL+SS RF  T ++IQS   PKS PLISSALSDLRRLP + +FNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRN TRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVI+L+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSV+HPASSSQMEFVITDL+TDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTD+IRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDDIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELGVNHA
Sbjct: 241 AIEKNKKKIEEGELGVNHA 259

[Close]

BLAST of Cla97C03G063550.1 vs. NCBI nr
Match: XP_023515457.1 (uncharacterized protein LOC111779609 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.4 bits (1160), Expect = 2.0e-123
Identity = 230/259 (88.80%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNLSG 60
           MA+NLA RLRS LLL+SS RF  T ++IQS   PKS PLI+SALSDLRRLP + +FNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLIASALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRFLSTARRN TRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVI+L+NF+EHL+FYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSV+HPASSSQMEFVITDL+TDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKNKKKIEEGELG NHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

[Close]

BLAST of Cla97C03G063550.1 vs. TrEMBL
Match: tr|A0A0A0M028|A0A0A0M028_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613490 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.6e-129
Identity = 238/259 (91.89%), Postives = 251/259 (96.91%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNLSG 60
           MATNLALRLRSRLLLQSS+RFR+TFH  QSPH PKSSPLI+SALSDLRR+P++PIFNLSG
Sbjct: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60

Query: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRF STARRNLTRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEK+SANPSKNKFRLGGLVLEGSV HPASSSQMEFVITDLITD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KPFTDEIRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKN+KKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of Cla97C03G063550.1 vs. TrEMBL
Match: tr|A0A1S3BP93|A0A1S3BP93_CUCME (cytochrome c-type biogenesis protein CcmE OS=Cucumis melo OX=3656 GN=LOC103492039 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.1e-128
Identity = 237/259 (91.51%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNLSG 60
           MATNLA RLRSRLLLQSS+RFR+TFH IQSPH PKSSPLISSALSDLRR+PD+PIFNLSG
Sbjct: 1   MATNLAFRLRSRLLLQSSSRFRTTFHQIQSPHIPKSSPLISSALSDLRRIPDNPIFNLSG 60

Query: 61  FRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120
           FRF STARRNLTRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVLSNFQEHLMFYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDL 180
           TPTDALEK+SANP+KNKFRLGGLVLEGSV HPASSSQMEFVITDLITD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPAKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVVEGF+KPFTDEIRNE+STKSVS KARS +YYFSA EVLAKHDEKYMPAEV A
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSEKARSEKYYFSAIEVLAKHDEKYMPAEVGA 240

Query: 241 AIEKNKKKIEEGELGVNHA 260
           AIEKN+KKIEEGELGVNHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of Cla97C03G063550.1 vs. TrEMBL
Match: tr|A0A2C9VRL6|A0A2C9VRL6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G166600 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.3e-91
Identity = 185/248 (74.60%), Postives = 205/248 (82.66%), Query Frame = 0


Query: 8   RLRSRLLLQSSARFRSTFHHIQSPHFP--KSSPLISSALSDLRRLPDDPIFNLSGFRFLS 67
           RLRS L+  S+    S   H  +P     KS  LI S LSDLR++  +   +L+G RF S
Sbjct: 9   RLRSHLIRTSTTTITSRLFHSTTPTLSTIKSECLILSPLSDLRKVSTE-FPSLTGLRFFS 68

Query: 68  TARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDA 127
           TARR+ TRPK VDIGARARQLQTRRLWTYALTFSCIAGFIVIVL++FQ+ L+FYVTPTDA
Sbjct: 69  TARRHPTRPKTVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNSFQDQLVFYVTPTDA 128

Query: 128 LEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLPDLFREGH 187
           +EKY ANP KNKFRLGGLVLEGSV  PASS +MEFVITDLITDILVR+QGSLPDLFREGH
Sbjct: 129 MEKYKANPQKNKFRLGGLVLEGSVAQPASSPEMEFVITDLITDILVRYQGSLPDLFREGH 188

Query: 188 SVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKN 247
           SVVVEGFVKPFT+E+R EV  KSVSGKARSGE YFSATEVLAKHDEKYMP EVAAAIEKN
Sbjct: 189 SVVVEGFVKPFTEELRKEVGVKSVSGKARSGECYFSATEVLAKHDEKYMPKEVAAAIEKN 248

Query: 248 KKKIEEGE 254
           K++IE  E
Sbjct: 249 KQQIEAAE 255

[Close]

BLAST of Cla97C03G063550.1 vs. TrEMBL
Match: tr|A0A2P6QLW9|A0A2P6QLW9_ROSCH (Putative heme-transporting ATPase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0077121 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 8.7e-91
Identity = 191/255 (74.90%), Postives = 211/255 (82.75%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFPKSSPLISSALSDL-RRLPDDPIFNLS 60
           MAT LALRL+S LL +++A   S  H      + KS P I SALS L    P     NL 
Sbjct: 1   MATRLALRLKSHLLRRTTAAPSSLIH---LRPYTKSPPSIFSALSQLPHPQPQRQPTNLR 60

Query: 61  GF--RFLST-ARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHL 120
            F  RFLST +RR  TRPK VDIGARARQLQTRRLWTYALTFSCIAGFIVIVL++FQ+ L
Sbjct: 61  SFTLRFLSTSSRRGPTRPKPVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNSFQDQL 120

Query: 121 MFYVTPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGS 180
           +FYVTPTDALEKY+ NPSK+KFRLGGLVLEGSVV PASS +MEFVITDL+TDILVR++GS
Sbjct: 121 VFYVTPTDALEKYATNPSKSKFRLGGLVLEGSVVQPASSPEMEFVITDLMTDILVRYKGS 180

Query: 181 LPDLFREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPA 240
           LPDLFREGHSVVVEGFVKPFTDE+R EVSTKSVSGKAR+GE YFSATEVLAKHDEKYMP 
Sbjct: 181 LPDLFREGHSVVVEGFVKPFTDEVRKEVSTKSVSGKARTGECYFSATEVLAKHDEKYMPG 240

Query: 241 EVAAAIEKNKKKIEE 252
           EVAAA+EKNKKK+ E
Sbjct: 241 EVAAALEKNKKKLAE 252

[Close]

BLAST of Cla97C03G063550.1 vs. TrEMBL
Match: tr|A0A061EQL1|A0A061EQL1_THECC (Transmembrane protein G1P-related 1 OS=Theobroma cacao OX=3641 GN=TCM_021638 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.6e-90
Identity = 187/261 (71.65%), Postives = 206/261 (78.93%), Query Frame = 0


Query: 1   MATNLALRLRSRLLLQSSARFRSTFHHIQSPHFP--KSSPLISSALSDLRRLPDDPIFNL 60
           MA  LAL  RS LL           H+ + P     KS PLIS  L+ +     D  F  
Sbjct: 1   MAARLALHFRSHLL--------RNLHNQKPPTLATLKSQPLISQ-LAPVPITTVDHFFTS 60

Query: 61  SGFRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMF 120
              RFLST+RR  TRPK+VDIGARARQLQTRRLWTYALTFSCIAGF+V+VL+NFQE L+F
Sbjct: 61  PTLRFLSTSRRIPTRPKKVDIGARARQLQTRRLWTYALTFSCIAGFVVLVLNNFQEQLVF 120

Query: 121 YVTPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLP 180
           YVTPTDALEKY+ NPSK KFRLGGLVLEGSVV P SS +MEFVITDLITDILVR++GSLP
Sbjct: 121 YVTPTDALEKYTQNPSKTKFRLGGLVLEGSVVQPGSSKEMEFVITDLITDILVRYEGSLP 180

Query: 181 DLFREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEV 240
           DLFREGHSVVVEGFVKPFT+E + EVS+KSVSGKARSG+ YFSATEVLAKHDEKYMPAEV
Sbjct: 181 DLFREGHSVVVEGFVKPFTEETKREVSSKSVSGKARSGDCYFSATEVLAKHDEKYMPAEV 240

Query: 241 AAAIEKNKKKIEEGELGVNHA 260
           AAAIEKNKKKIEEG  G   +
Sbjct: 241 AAAIEKNKKKIEEGLEGTKES 252

[Close]

BLAST of Cla97C03G063550.1 vs. Swiss-Prot
Match: sp|Q96326|CCME_ARATH (Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CCME PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.4e-81
Identity = 162/252 (64.29%), Postives = 198/252 (78.57%), Query Frame = 0


Query: 1   MATNLALRLRSRLL--LQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNL 60
           MA  L  R  S++L  +Q + +  S+F     P F      +++A  D  RL      +L
Sbjct: 1   MAARLLFRRSSQILRSIQRNPQISSSFESPPCPIFHS----LTTASPDPSRLS-----SL 60

Query: 61  SGFRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMF 120
           +  R LS ARR  TRPK++DIGA+ARQ+Q RRLWTYALTFSCIAGF+VIVL+ FQ+ L+F
Sbjct: 61  TFLRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVF 120

Query: 121 YVTPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLP 180
           Y+TP+DA+EK++ NP+KNKFRLGGLVLEGSV  PA+S +MEFVITDLITDILVR++GSLP
Sbjct: 121 YLTPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLP 180

Query: 181 DLFREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEV 240
           DLFREGHSVVVEGF+KP+TDE+R EVSTK +S KAR+ + +FSATEVLAKHDEKYMP EV
Sbjct: 181 DLFREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEV 240

Query: 241 AAAIEKNKKKIE 251
           AAAIEKNKK IE
Sbjct: 241 AAAIEKNKKIIE 243

[Close]

BLAST of Cla97C03G063550.1 vs. Swiss-Prot
Match: sp|Q2RYF4|CCME_RHORT (Cytochrome c-type biogenesis protein CcmE OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) OX=269796 GN=ccmE PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-19
Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 89  RRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDALEKYSANPSKNKFRLGGLVLEGS 148
           RRL+   L    +     + L+ FQ++L+F+ +PTD  EK        +FR+GGLV EGS
Sbjct: 6   RRLYFVVLGMLALFAAAGLTLTAFQDNLVFFYSPTDLQEK--GVDQGRRFRVGGLVEEGS 65

Query: 149 VVHPASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVSTKS 208
           VV    +  + F++TDL+  + VR+ G LPDLFREG  VV EG                 
Sbjct: 66  VVRDGET--VRFIVTDLMNTVTVRYTGMLPDLFREGQGVVAEG----------------- 125

Query: 209 VSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKK 248
               A  G   F A  VLAKHDE YMP EVA +++ + K
Sbjct: 126 ----AMDGAGTFVAASVLAKHDENYMPPEVAESLKASGK 139

[Close]

BLAST of Cla97C03G063550.1 vs. Swiss-Prot
Match: sp|A1KCJ1|CCME_AZOSB (Cytochrome c-type biogenesis protein CcmE OS=Azoarcus sp. (strain BH72) OX=62928 GN=ccmE PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.5e-18
Identity = 59/141 (41.84%), Postives = 77/141 (54.61%), Query Frame = 0


Query: 107 IVLSNFQEHLMFYVTPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLI 166
           +VLS FQ++L+F+ TP++  E     P    FR+GG+V  GS+   A    + FVITD  
Sbjct: 24  LVLSAFQQNLVFFHTPSEVAE--GKAPVGKTFRVGGMVETGSIQRDADGVTVRFVITDTA 83

Query: 167 TDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVL 226
             I V ++GSLPDLF+EG   VV+G              T    G+       F ATEVL
Sbjct: 84  KVIPVSYRGSLPDLFKEGKGAVVQG--------------TLGADGQ-------FRATEVL 141

Query: 227 AKHDEKYMPAEVAAAIEKNKK 248
           AKHDE YMP E A A+E+  K
Sbjct: 144 AKHDENYMPPEAAHALEQAHK 141

[Close]

BLAST of Cla97C03G063550.1 vs. Swiss-Prot
Match: sp|B3R8Z5|CCME_CUPTR (Cytochrome c-type biogenesis protein CcmE OS=Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1) OX=977880 GN=ccmE PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.5e-18
Identity = 56/156 (35.90%), Postives = 80/156 (51.28%), Query Frame = 0


Query: 89  RRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDALEKYSANPSKNKFRLGGLVLEGS 148
           RRL   A   +C      +VL+ F+ +L+F+ +P+    + +  P    FRLGGLV  GS
Sbjct: 6   RRLGLLAAALACCGVAAALVLNAFRANLVFFFSPSQVAAQEA--PVARSFRLGGLVASGS 65

Query: 149 VVHPASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVSTKS 208
           +        + FV+TD    + V+++G LPDLFREG  VV  G ++              
Sbjct: 66  IRREGDGMTVRFVVTDTARQVPVQYRGLLPDLFREGKGVVARGQLR-------------- 125

Query: 209 VSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEK 245
                   +  F ATEVLAKHDE YMP E AAA+++
Sbjct: 126 -------ADGTFVATEVLAKHDENYMPPEAAAALKQ 138

[Close]

BLAST of Cla97C03G063550.1 vs. Swiss-Prot
Match: sp|Q82WC5|CCME_NITEU (Cytochrome c-type biogenesis protein CcmE OS=Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) OX=228410 GN=ccmE PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.9e-18
Identity = 59/159 (37.11%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 89  RRLWTYALTFSCIAGFIVIVLSNFQEHLMFYVTPTDALEKYSANPSKNKFRLGGLVLEGS 148
           +++   AL+ S +   +V+VL+ FQ +L+F+ +P+    K +  P    FR+GGLV EGS
Sbjct: 6   KKMAVIALSVSALTVAVVLVLNAFQSNLVFFFSPSQVAAKEA--PIGKSFRIGGLVEEGS 65

Query: 149 VVHPASSSQMEFVITDLITDILVRHQGSLPDLFREGHSVVVEGFVKPFTDEIRNEVSTKS 208
           +      + + F ITD    I V + G LPDLF+EG  VV +G +               
Sbjct: 66  LKREGDGTTLNFAITDTAEVIRVVYTGILPDLFKEGKGVVAQGKM--------------- 125

Query: 209 VSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKK 248
               A  G +Y  A EVLAKHDE YMP E A+A+E+  K
Sbjct: 126 ----ADDGIFY--ADEVLAKHDENYMPPEAASALEQAAK 141

[Close]

BLAST of Cla97C03G063550.1 vs. TAIR10
Match: AT3G51790.1 (transmembrane protein G1P-related 1)

HSP 1 Score: 301.6 bits (771), Expect = 4.7e-82
Identity = 162/252 (64.29%), Postives = 198/252 (78.57%), Query Frame = 0


Query: 1   MATNLALRLRSRLL--LQSSARFRSTFHHIQSPHFPKSSPLISSALSDLRRLPDDPIFNL 60
           MA  L  R  S++L  +Q + +  S+F     P F      +++A  D  RL      +L
Sbjct: 1   MAARLLFRRSSQILRSIQRNPQISSSFESPPCPIFHS----LTTASPDPSRLS-----SL 60

Query: 61  SGFRFLSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMF 120
           +  R LS ARR  TRPK++DIGA+ARQ+Q RRLWTYALTFSCIAGF+VIVL+ FQ+ L+F
Sbjct: 61  TFLRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVF 120

Query: 121 YVTPTDALEKYSANPSKNKFRLGGLVLEGSVVHPASSSQMEFVITDLITDILVRHQGSLP 180
           Y+TP+DA+EK++ NP+KNKFRLGGLVLEGSV  PA+S +MEFVITDLITDILVR++GSLP
Sbjct: 121 YLTPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLP 180

Query: 181 DLFREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEV 240
           DLFREGHSVVVEGF+KP+TDE+R EVSTK +S KAR+ + +FSATEVLAKHDEKYMP EV
Sbjct: 181 DLFREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEV 240

Query: 241 AAAIEKNKKKIE 251
           AAAIEKNKK IE
Sbjct: 241 AAAIEKNKKIIE 243

The following BLAST results are available for this feature:

BLAST of Cla97C03G063550.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139025.1	2.5e-129	91.89	PREDICTED: uncharacterized protein LOC101211081 [Cucumis sativus] >KGN66477.1 hy...	[more]
XP_008450439.1	1.6e-128	91.51	PREDICTED: cytochrome c-type biogenesis protein CcmE [Cucumis melo]	[more]
XP_022154075.1	1.8e-124	91.51	uncharacterized protein LOC111021418 [Momordica charantia]	[more]
XP_022960773.1	6.9e-124	89.19	uncharacterized protein LOC111461474 [Cucurbita moschata]	[more]
XP_023515457.1	2.0e-123	88.80	uncharacterized protein LOC111779609 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C03G063550.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M028\|A0A0A0M028_CUCSA	1.6e-129	91.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613490 PE=3 SV=1	[more]
tr\|A0A1S3BP93\|A0A1S3BP93_CUCME	1.1e-128	91.51	cytochrome c-type biogenesis protein CcmE OS=Cucumis melo OX=3656 GN=LOC10349203...	[more]
tr\|A0A2C9VRL6\|A0A2C9VRL6_MANES	1.3e-91	74.60	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G166600 PE=3 SV=...	[more]
tr\|A0A2P6QLW9\|A0A2P6QLW9_ROSCH	8.7e-91	74.90	Putative heme-transporting ATPase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g00...	[more]
tr\|A0A061EQL1\|A0A061EQL1_THECC	5.6e-90	71.65	Transmembrane protein G1P-related 1 OS=Theobroma cacao OX=3641 GN=TCM_021638 PE=...	[more]

BLAST of Cla97C03G063550.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q96326\|CCME_ARATH	8.4e-81	64.29	Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial OS=Arabidopsis ...	[more]
sp\|Q2RYF4\|CCME_RHORT	1.8e-19	38.99	Cytochrome c-type biogenesis protein CcmE OS=Rhodospirillum rubrum (strain ATCC ...	[more]
sp\|A1KCJ1\|CCME_AZOSB	3.5e-18	41.84	Cytochrome c-type biogenesis protein CcmE OS=Azoarcus sp. (strain BH72) OX=62928...	[more]
sp\|B3R8Z5\|CCME_CUPTR	4.5e-18	35.90	Cytochrome c-type biogenesis protein CcmE OS=Cupriavidus taiwanensis (strain DSM...	[more]
sp\|Q82WC5\|CCME_NITEU	5.9e-18	37.11	Cytochrome c-type biogenesis protein CcmE OS=Nitrosomonas europaea (strain ATCC ...	[more]

BLAST of Cla97C03G063550.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51790.1	4.7e-82	64.29	transmembrane protein G1P-related 1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005886	plasma membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0017004	cytochrome complex assembly
GO:0017003	protein-heme linkage

Vocabulary: **Molecular Function**
Term	Definition
GO:0020037	heme binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036127	CcmE-like_sf
IPR004329	CcmE

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0017003	protein-heme linkage
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0020037	heme binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C03G063550	Cla97C03G063550	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C03G063550.1.CDS.1	Cla97C03G063550.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C03G063550.1.exon.1	Cla97C03G063550.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C03G063550.1	Cla97C03G063550.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004329	CcmE/CycJ protein	PFAM	PF03100	CcmE	coord: 87..235 e-value: 8.2E-44 score: 148.6
IPR004329	CcmE/CycJ protein	PANTHER	PTHR34128	FAMILY NOT NAMED	coord: 1..253
IPR004329	CcmE/CycJ protein	HAMAP	MF_01959	CcmE	coord: 84..246 score: 24.753
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 112..242 e-value: 4.0E-28 score: 99.6
None	No IPR available	PANTHER	PTHR34128:SF2	SUBFAMILY NOT NAMED	coord: 1..253
IPR036127	CcmE-like superfamily	SUPERFAMILY	SSF82093	Heme chaperone CcmE	coord: 112..241