Cla97C02G035590.1 (mRNA) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G035590.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	nuclear transcription factor Y subunit B-3
Location	Cla97Chr02 : 12253290 .. 12253907 (-)
Sequence length	618

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTCTGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTGTCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTAAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCGAAAGATGCAAAAGAAACTGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAAAGAAAGACAATCAACGGCGACGATTTGTTGTGGGCCATGACCACGCTTGGATTCGAAGAGTATGTGGAACCACTCAAGACTTATCTGCAGAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTGCTGGTGGTGGGACCGGCGGCAGTGGGACAAATAGTGGTGGTGGTGGAGTCAACTCTGGTACTGCTGGTGGTGGTGGTGGCGGCGGTGGATTTAACGGAGTGGGTGGAATTTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGTGCTGGTGGATTTCACCATATGGGAATTGGCGGTGGGAAGGGTGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG

mRNA sequence

ATGGCGGATTCTGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTGTCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTAAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCGAAAGATGCAAAAGAAACTGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAAAGAAAGACAATCAACGGCGACGATTTGTTGTGGGCCATGACCACGCTTGGATTCGAAGAGTATGTGGAACCACTCAAGACTTATCTGCAGAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTGCTGGTGGTGGGACCGGCGGCAGTGGGACAAATAGTGGTGGTGGTGGAGTCAACTCTGGTACTGCTGGTGGTGGTGGTGGCGGCGGTGGATTTAACGGAGTGGGTGGAATTTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGTGCTGGTGGATTTCACCATATGGGAATTGGCGGTGGGAAGGGTGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG

Coding sequence (CDS)

ATGGCGGATTCTGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTGTCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTAAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCGAAAGATGCAAAAGAAACTGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAAAGAAAGACAATCAACGGCGACGATTTGTTGTGGGCCATGACCACGCTTGGATTCGAAGAGTATGTGGAACCACTCAAGACTTATCTGCAGAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTGCTGGTGGTGGGACCGGCGGCAGTGGGACAAATAGTGGTGGTGGTGGAGTCAACTCTGGTACTGCTGGTGGTGGTGGTGGCGGCGGTGGATTTAACGGAGTGGGTGGAATTTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGTGCTGGTGGATTTCACCATATGGGAATTGGCGGTGGGAAGGGTGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG

Protein sequence

MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGAGGGTGGSGTNSGGGGVNSGTAGGGGGGGGFNGVGGIYGGMMMMGHHQGGVYGAGGFHHMGIGGGKGGSGGSGTGHR

Homology

[Close]

BLAST of Cla97C02G035590.1 vs. NCBI nr
Match: XP_004139999.1 (PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis sativus] >KGN46611.1 hypothetical protein Csa_6G112490 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 9.2e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKD 128
           GRQGEKD
Sbjct: 121 GRQGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. NCBI nr
Match: XP_008464158.1 (PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_008464159.1 PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 9.2e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKD 128
           GRQGEKD
Sbjct: 121 GRQGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. NCBI nr
Match: XP_022140566.1 (nuclear transcription factor Y subunit B-3-like, partial [Momordica charantia])

HSP 1 Score: 249.6 bits (636), Expect = 9.2e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKD 128
           GRQGEKD
Sbjct: 121 GRQGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. NCBI nr
Match: XP_022943898.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita moschata])

HSP 1 Score: 246.9 bits (629), Expect = 6.0e-62
Identity = 125/127 (98.43%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRE+EGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120

Query: 121 GRQGEKD 128
           GRQGEKD
Sbjct: 121 GRQGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. NCBI nr
Match: XP_023513391.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.6 bits (623), Expect = 3.0e-61
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRE+EGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120

Query: 121 GRQGEK 127
           GRQGEK
Sbjct: 121 GRQGEK 126

[Close]

BLAST of Cla97C02G035590.1 vs. TrEMBL
Match: tr|A0A1S3CMC5|A0A1S3CMC5_CUCME (nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC103502105 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.1e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKD 128
           GRQGEKD
Sbjct: 121 GRQGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. TrEMBL
Match: tr|A0A0A0KFU2|A0A0A0KFU2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112490 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.1e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKD 128
           GRQGEKD
Sbjct: 121 GRQGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. TrEMBL
Match: tr|A0A067K1C4|A0A067K1C4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18501 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.4e-61
Identity = 123/127 (96.85%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHN+NANSELSA+EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNNNANSELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK YLQKYREMEGEKS+M
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKSSM 120

Query: 121 GRQGEKD 128
           GRQGEKD
Sbjct: 121 GRQGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. TrEMBL
Match: tr|A0A0H3XSM1|A0A0H3XSM1_VERFO (Nuclear transcription factor Y subunit B-11 OS=Vernicia fordii OX=73154 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.2e-60
Identity = 122/127 (96.06%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHN+NANSELSA+EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNNNANSELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK YLQKYREMEGEKS+M
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKSSM 120

Query: 121 GRQGEKD 128
           GR GEKD
Sbjct: 121 GRPGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. TrEMBL
Match: tr|A0A200RBS7|A0A200RBS7_9MAGN (Transcription factor OS=Macleaya cordata OX=56857 GN=BVC80_1663g24 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.4e-59
Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHN+NANSELS +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNNNANSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK YLQK+REMEGEKS+M
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKFREMEGEKSSM 120

Query: 121 GRQGEKD 128
           GR GEKD
Sbjct: 121 GRPGEKD 127

[Close]

BLAST of Cla97C02G035590.1 vs. Swiss-Prot
Match: sp|O23310|NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.4e-53
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQG 125
            GRQG
Sbjct: 121 AGRQG 123

[Close]

BLAST of Cla97C02G035590.1 vs. Swiss-Prot
Match: sp|Q9FGJ3|NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-50
Identity = 100/126 (79.37%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MADSDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGR 123
           ++ +GR
Sbjct: 121 RTGLGR 126

[Close]

BLAST of Cla97C02G035590.1 vs. Swiss-Prot
Match: sp|Q69J40|NFYBA_ORYSJ (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-49
Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           M DSDNESGG  SNA    SA+EQDRFLPIANVSRIMK+ALPANAKISKDAKETVQECVS
Sbjct: 1   MPDSDNESGG-PSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKS 119
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+Y++PLK YL K+RE+EGEK+
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKA 117

[Close]

BLAST of Cla97C02G035590.1 vs. Swiss-Prot
Match: sp|Q75IZ7|NFYB8_ORYSJ (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.8e-49
Identity = 100/118 (84.75%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSA-KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60
           M DSDN+SGG ++ A  ELS+ +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV
Sbjct: 1   MPDSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60

Query: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK 118
           SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YV+PLK YL K+RE+EGE+
Sbjct: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGER 118

[Close]

BLAST of Cla97C02G035590.1 vs. Swiss-Prot
Match: sp|Q60EQ4|NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 2.9e-44
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 22  KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 81
           +EQDRFLPIAN+SRIMKKA+PAN KI+KDAKETVQECVSEFISFIT EASDKCQREKRKT
Sbjct: 37  REQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 96

Query: 82  INGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGE 126
           INGDDLLWAM TLGFE+Y+EPLK YLQKYREMEG+     + G+
Sbjct: 97  INGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGD 140

[Close]

BLAST of Cla97C02G035590.1 vs. TAIR10
Match: AT4G14540.1 (nuclear factor Y, subunit B3)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-54
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQG 125
            GRQG
Sbjct: 121 AGRQG 123

[Close]

BLAST of Cla97C02G035590.1 vs. TAIR10
Match: AT5G47640.1 (nuclear factor Y, subunit B2)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-51
Identity = 100/126 (79.37%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MADSDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGR 123
           ++ +GR
Sbjct: 121 RTGLGR 126

[Close]

BLAST of Cla97C02G035590.1 vs. TAIR10
Match: AT3G53340.1 (nuclear factor Y, subunit B10)

HSP 1 Score: 174.5 bits (441), Expect = 6.8e-44
Identity = 81/107 (75.70%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 19  LSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 78
           L+ +EQDRFLPIAN+SRIMK+ LP N KI+KDAKET+QECVSEFISF+T EASDKCQREK
Sbjct: 25  LNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREK 84

Query: 79  RKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGE 126
           RKTINGDDLLWAM TLGFE+Y++PLK YL +YREMEG+    G+ GE
Sbjct: 85  RKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGE 131

[Close]

BLAST of Cla97C02G035590.1 vs. TAIR10
Match: AT2G37060.1 (nuclear factor Y, subunit B8)

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-43
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 0


Query: 6   NESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF 65
           +ESGG  S  +  L  +EQDRFLPIAN+SRIMK+ LPAN KI+KDAKE VQECVSEFISF
Sbjct: 15  HESGGDQSPRS--LHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISF 74

Query: 66  ITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGE 125
           +T EASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLK YL +YREMEG+     + G+
Sbjct: 75  VTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGGD 132

[Close]

BLAST of Cla97C02G035590.1 vs. TAIR10
Match: AT2G13570.1 (nuclear factor Y, subunit B7)

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 25  DRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTING 84
           DRFLPIANV RIMKK LP N KISKDAKETVQECVSEFISF+TGEASDKCQREKRKTING
Sbjct: 38  DRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTING 97

Query: 85  DDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK 118
           DD++WA+TTLGFE+YV PLK YL KYR+ EGEK
Sbjct: 98  DDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK 130

The following BLAST results are available for this feature:

BLAST of Cla97C02G035590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139999.1	9.2e-63	100.00	PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis sativus] >KGN4661...	[more]
XP_008464158.1	9.2e-63	100.00	PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_0084641...	[more]
XP_022140566.1	9.2e-63	100.00	nuclear transcription factor Y subunit B-3-like, partial [Momordica charantia]	[more]
XP_022943898.1	6.0e-62	98.43	nuclear transcription factor Y subunit B-3-like [Cucurbita moschata]	[more]
XP_023513391.1	3.0e-61	98.41	nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C02G035590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CMC5\|A0A1S3CMC5_CUCME	6.1e-63	100.00	nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC1035021...	[more]
tr\|A0A0A0KFU2\|A0A0A0KFU2_CUCSA	6.1e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112490 PE=4 SV=1	[more]
tr\|A0A067K1C4\|A0A067K1C4_JATCU	4.4e-61	96.85	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18501 PE=4 SV=1	[more]
tr\|A0A0H3XSM1\|A0A0H3XSM1_VERFO	2.2e-60	96.06	Nuclear transcription factor Y subunit B-11 OS=Vernicia fordii OX=73154 PE=2 SV=...	[more]
tr\|A0A200RBS7\|A0A200RBS7_9MAGN	2.4e-59	94.49	Transcription factor OS=Macleaya cordata OX=56857 GN=BVC80_1663g24 PE=4 SV=1	[more]

BLAST of Cla97C02G035590.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23310\|NFYB3_ARATH	3.4e-53	87.20	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q9FGJ3\|NFYB2_ARATH	3.6e-50	79.37	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q69J40\|NFYBA_ORYSJ	1.8e-49	85.59	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]
sp\|Q75IZ7\|NFYB8_ORYSJ	8.8e-49	84.75	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]
sp\|Q60EQ4\|NFYB3_ORYSJ	2.9e-44	81.73	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Cla97C02G035590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14540.1	1.9e-54	87.20	nuclear factor Y, subunit B3	[more]
AT5G47640.1	2.0e-51	79.37	nuclear factor Y, subunit B2	[more]
AT3G53340.1	6.8e-44	75.70	nuclear factor Y, subunit B10	[more]
AT2G37060.1	3.4e-43	71.67	nuclear factor Y, subunit B8	[more]
AT2G13570.1	2.4e-41	84.95	nuclear factor Y, subunit B7	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0046982	protein heterodimerization activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003956	Transcrpt_fac_NFYB/HAP3_CS
IPR009072	Histone-fold
IPR003958	CBFA_NFYB_domain

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C02G035590	Cla97C02G035590	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G035590.1.CDS.1	Cla97C02G035590.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C02G035590.1.exon.1	Cla97C02G035590.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C02G035590.1	Cla97C02G035590.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 74..92 score: 38.52 coord: 93..111 score: 44.86 coord: 55..73 score: 50.24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..154
None	No IPR available	PANTHER	PTHR11064:SF87	SUBFAMILY NOT NAMED	coord: 1..201
None	No IPR available	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..201
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 27..91 e-value: 6.3E-28 score: 96.8
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 16..136 e-value: 7.5E-47 score: 160.7
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 24..129
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 58..74