Cla97C02G027810.1 (mRNA) Watermelon (97103) v2

Overview
NameCla97C02G027810.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionWound-responsive family protein
LocationCla97Chr02 : 1409289 .. 1411973 (-)
Sequence length327
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGCAGAAACTGGTGAGCAACAATGCACTAACTACAATTCCAATTCCTCCATGAAAACTTTCTCTATTTACCCTAATTGTACTTCTACCAAGTTTTCTTCTTCTTCTTCTTCTTCCTCAAAACACCCCACCAAATTTCCCCATAATGGCTCCATCTCCGGCGCCAAACACGGCGGTGATAGGGACAAGTTCAAAAAGGCTGAAGAGTCTCTTCGAACCGTCATGTATTTGAGCTGTTGGGGTCCTAATTCATGATGACGTACGTTTTTCTAACCATTTATTTCCAGAAATTATTCGAGGAGTTGACGAAATAAATTTTAAAGATGGTATTTCCAACCTATATTTTGAAAGGTGGCTATGCAACCAACTAATTTTGAACATATATCAACCGTTATCGTCAGTCGACAATCATATTGTAATGTTCTTATTAAATTTTCATTTGCCGTTGGTGTGCGTTTTCCTACAAAAATTGTAGCATTGTAGATGGAAGGAATTAGGCTTTGTTGCTATAAATTAGTGGTGGATCGATCGGAGAATGGTGCATTGGCAGTTTAGTTTGACACTCCACGAGGCGAAGTTTTTGTAGTCATTAATTTGATTATTTTGTGCCTCGTTTTTAATTTGATTAACTTGCATTTTGTAATGCATTTATATTTTGGTAATCAACTTTTATGTTTGTCTTGTTTTAAGTTTTTAACATTAGAAATTTATTTAAGTTGGTAAGGAAAGTAGCATGTTTCTATGTATATTAATTTAAGGCAGTCGATTTTGAACTAAAATTTTTATTTTGTAGAAAATTAGATCTTGAATTTGAATAATAATTGTAATCAAATCATAGCCCAACTAATAAAATCATTAAAAAAAAAAAAAAAAAAAAAAAAAACATGTCATGTGAGTGTCCAAAAATCCAATCATAAAAATACTTGAAGCGCAGAAAACGAAGAGTAAAAAATATTCAAACTTAGCCACAAAATGCCCACATCTAACTCATTAAAGCGTGCCCAACATAATTGGAAGAACAACCTGCAAAAAGTTTTGGTATTTGTTAGTGATGCAAATAAATATTAAAAAGATAAAGTACAACAAGTAAATTTAAACCGAGTTGAACCGAATGGTTTGGTTTGATTTTTATCTGAAGTTTAAAATTTGAGAAAATCGAACCAAACCAATGGATATATATCATTTAAAAAGATTCTAGAACCACTTAATTCCCTCATCGCCTTAATAGCATTGTCAACCATCGTCTCCTTATAGCAGTCATGCCTAGCACCAACGAAAGTCTTCTTCTTCTCTTCTCTTTTTGATTTGATTCTTCTCAAATTCAAATGGTTCCTCAACCTCTTTGCCTCATTATCTCAGTCCCATCAACCATCAACACATATGTCTTATTGGATATTGGTAATTCAGTTCTTCTGTAAAACACTAACTGGATTGGGCCTAAAACCCAAAAATCATCTTGAGTTCTTGTCTAATCATAAGAAACCTCATAATTATAATTGAAATCTCAATATCAACCTCGACACTGATATTTTAATTAATCATACTAAATTAAGATTAATTGAAAGTACAAAATCAAAATTAGACATTTCAAAGTAGCATTTTAATCTTGTCCTAAATTAATTAATTAAAAGTTAACATCAAAATGGAGTAAACATGTAAAATATTAAAGCTAGGGATTTTAAAAAGATCTTATAAATCCAATCAACTCAACCTAGCCATATAATTTGAGTTGAATTGAGTTTAAATAAATGAATTTTTTATGAGTTGGATTGCTTTATTGGTTCACTTATTATTTGTTTTAAGAAGTATGTTTATTTAAGTATGAAACAATTATATATACACATGTTTATTTTAATTTTGTTTAGCTTCATAATTTTTTTTAATAGTTTATTCTTCAAATCACTCTAAACATAATTTTTTTACCACTTTTCGAAATAAAATTTTTATAATATAAATTGAAATTGAGTTGTTAATCTTAATTCTTAATTCAATATATATATCATATTATTAAATAAAATTTTATACATTAACATTTTACTTATTTTTAGAATAAAAATTTTAATAAATGACGTGATTAACACAACCCAACATGAATTGAGTTCGAATTAAAAAACATAACCCAAATAATTGGTTTAGGTCTTAAAAAAGAAAAAAAAAAAAGTGCTTCAACCTAGTTCAATTTAACTCAACCCAAAAACCCACTCATTAGAACTGTTAACAAACCATAGGCCACAGACACAAGGAGTTCCATATTTATACAAATATAGGGAAATAATATAAGAGTTTTTTTTTTTTACAAAAGTATTTAGAGATAAGGACAAAAAAAAAAACGTGGAATTGAGCTCTATTTTAAAATTCCGCGGTTTTTCCCATAATCCGGGGGGGAGAAATAGAAAGGCTGTATAATTTCCAAATTCCAACTTAATCGGATATATCCCAATAATTTTAGTTCGTCAAAACCCAATCCTACCCCTCCAATTCTTATCCCGAAAAGCAGTTTCAAGGGCTAATTAAGTCCACTTACTACAAAAACCAAAACACCATTACGCCAGAAACCATGCGGGGTTTATTTCTCAGGCTAAGAAGTTTTCCTCCGCTGTGCCGTCCGCCAACCACGTACAAGAGTCGGAGGAATCTCTGAGGAGGTTCATGTACCTTAGTTGTTGGGGTCCTAATAACTGA

mRNA sequence

ATGGGTGCAGAAACTGGTGAGCAACAATGCACTAACTACAATTCCAATTCCTCCATGAAAACTTTCTCTATTTACCCTAATTGTACTTCTACCAAGTTTTCTTCTTCTTCTTCTTCTTCCTCAAAACACCCCACCAAATTTCCCCATAATGGCTCCATCTCCGGCGCCAAACACGGCGGTGATAGGGACAAGTTCAAAAAGGCTGAAGAGTCTCTTCGAACCGCTAAGAAGTTTTCCTCCGCTGTGCCGTCCGCCAACCACGTACAAGAGTCGGAGGAATCTCTGAGGAGGTTCATGTACCTTAGTTGTTGGGGTCCTAATAACTGA

Coding sequence (CDS)

ATGGGTGCAGAAACTGGTGAGCAACAATGCACTAACTACAATTCCAATTCCTCCATGAAAACTTTCTCTATTTACCCTAATTGTACTTCTACCAAGTTTTCTTCTTCTTCTTCTTCTTCCTCAAAACACCCCACCAAATTTCCCCATAATGGCTCCATCTCCGGCGCCAAACACGGCGGTGATAGGGACAAGTTCAAAAAGGCTGAAGAGTCTCTTCGAACCGCTAAGAAGTTTTCCTCCGCTGTGCCGTCCGCCAACCACGTACAAGAGTCGGAGGAATCTCTGAGGAGGTTCATGTACCTTAGTTGTTGGGGTCCTAATAACTGA

Protein sequence

MGAETGEQQCTNYNSNSSMKTFSIYPNCTSTKFSSSSSSSSKHPTKFPHNGSISGAKHGGDRDKFKKAEESLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN
Homology
[Close]
BLAST of Cla97C02G027810.1 vs. NCBI nr
Match: KGN43575.1 (hypothetical protein Csa_7G046140 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 2.5e-11
Identity = 55/106 (51.89%), Postives = 63/106 (59.43%), Query Frame = 0 

Query: 6   GEQQ--CTNYNSNSSMKT-FSIYPNCTSTKFSXXXXXXXXHPTKFPHNGSISGAKHGGDR 65
           GEQQ   TN+NSNSS+KT FSIYPN TS+K S    XX  +PTKF HNGS+S     G++
Sbjct: 3   GEQQQYTTNFNSNSSIKTNFSIYPNHTSSKSS---SXXSKYPTKFSHNGSVS----QGEK 62

Query: 66  DKFKKAEESLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           DK KKAEESLRT                        MYLSCWGPN+
Sbjct: 63  DKIKKAEESLRTV-----------------------MYLSCWGPNS 78

[Close]
BLAST of Cla97C02G027810.1 vs. NCBI nr
Match: XP_004136807.1 (PREDICTED: uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hypothetical protein Csa_7G046650 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 4.9e-07
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 71  SLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           SL  AKKFSSAV SAN +Q+SEESLR  MYLSCWGPNN
Sbjct: 45  SLSQAKKFSSAVSSANRLQQSEESLRTVMYLSCWGPNN 82

[Close]
BLAST of Cla97C02G027810.1 vs. NCBI nr
Match: XP_004136808.1 (PREDICTED: uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.1 PREDICTED: uncharacterized protein LOC103495545 [Cucumis melo] >KGN43576.1 hypothetical protein Csa_7G046640 [Cucumis sativus])

HSP 1 Score: 62.8 bits (151), Expect = 8.4e-07
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 71  SLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           S+  AKK SSAVPSAN  Q+SEESLR  MYLSCWGPNN
Sbjct: 45  SISQAKKLSSAVPSANRFQQSEESLRTVMYLSCWGPNN 82

[Close]
BLAST of Cla97C02G027810.1 vs. NCBI nr
Match: XP_008455358.1 (PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 8.4e-07
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 71  SLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           S+  AKKFSSAV SAN +Q+SEESLR  MYLSCWGPNN
Sbjct: 45  SISQAKKFSSAVSSANRLQQSEESLRTVMYLSCWGPNN 82

[Close]
BLAST of Cla97C02G027810.1 vs. NCBI nr
Match: XP_022952159.1 (uncharacterized protein LOC111454920 [Cucurbita moschata])

HSP 1 Score: 53.5 bits (127), Expect = 5.1e-04
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 71  SLRTAKKFSSAVPSA--NHVQESEESLRRFMYLSCWGPNN 109
           S+  AKKFS+AVP A    + +SEESLR  MYLSCWGPNN
Sbjct: 45  SISQAKKFSAAVPPAPGKQLHQSEESLRTVMYLSCWGPNN 84

[Close]
BLAST of Cla97C02G027810.1 vs. TrEMBL
Match: tr|A0A0A0K1Q2|A0A0A0K1Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 55/106 (51.89%), Postives = 63/106 (59.43%), Query Frame = 0 

Query: 6   GEQQ--CTNYNSNSSMKT-FSIYPNCTSTKFSXXXXXXXXHPTKFPHNGSISGAKHGGDR 65
           GEQQ   TN+NSNSS+KT FSIYPN TS+K S    XX  +PTKF HNGS+S     G++
Sbjct: 3   GEQQQYTTNFNSNSSIKTNFSIYPNHTSSKSS---SXXSKYPTKFSHNGSVS----QGEK 62

Query: 66  DKFKKAEESLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           DK KKAEESLRT                        MYLSCWGPN+
Sbjct: 63  DKIKKAEESLRTV-----------------------MYLSCWGPNS 78

[Close]
BLAST of Cla97C02G027810.1 vs. TrEMBL
Match: tr|A0A0A0K5N2|A0A0A0K5N2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046650 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-07
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 71  SLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           SL  AKKFSSAV SAN +Q+SEESLR  MYLSCWGPNN
Sbjct: 45  SLSQAKKFSSAVSSANRLQQSEESLRTVMYLSCWGPNN 82

[Close]
BLAST of Cla97C02G027810.1 vs. TrEMBL
Match: tr|A0A1S3C0A5|A0A1S3C0A5_CUCME (uncharacterized protein LOC103495545 OS=Cucumis melo OX=3656 GN=LOC103495545 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-07
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 71  SLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           S+  AKK SSAVPSAN  Q+SEESLR  MYLSCWGPNN
Sbjct: 45  SISQAKKLSSAVPSANRFQQSEESLRTVMYLSCWGPNN 82

[Close]
BLAST of Cla97C02G027810.1 vs. TrEMBL
Match: tr|A0A1S3C1Y6|A0A1S3C1Y6_CUCME (uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-07
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 71  SLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           S+  AKKFSSAV SAN +Q+SEESLR  MYLSCWGPNN
Sbjct: 45  SISQAKKFSSAVSSANRLQQSEESLRTVMYLSCWGPNN 82

[Close]
BLAST of Cla97C02G027810.1 vs. TrEMBL
Match: tr|A0A0A0K6Y8|A0A0A0K6Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-07
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 71  SLRTAKKFSSAVPSANHVQESEESLRRFMYLSCWGPNN 109
           S+  AKK SSAVPSAN  Q+SEESLR  MYLSCWGPNN
Sbjct: 45  SISQAKKLSSAVPSANRFQQSEESLRTVMYLSCWGPNN 82

[Close]
BLAST of Cla97C02G027810.1 vs. TAIR10
Match: AT4G10265.1 (Wound-responsive family protein)

HSP 1 Score: 42.4 bits (98), Expect = 2.1e-04
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0 

Query: 71  SLRTAKKF-SSAVPSANHVQESEESLRRFMYLSCWGPN 108
           S+  AKK  SS++   N  +++EESLR  MYLSCWGP+
Sbjct: 46  SVSQAKKLSSSSIDYTNKTKQAEESLRTVMYLSCWGPS 83

The following BLAST results are available for this feature:
BLAST of Cla97C02G027810.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43575.12.5e-1151.89hypothetical protein Csa_7G046140 [Cucumis sativus][more]
XP_004136807.14.9e-0778.95PREDICTED: uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hy... [more]
XP_004136808.18.4e-0776.32PREDICTED: uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.... [more]
XP_008455358.18.4e-0776.32PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo][more]
XP_022952159.15.1e-0465.00uncharacterized protein LOC111454920 [Cucurbita moschata][more]
BLAST of Cla97C02G027810.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K1Q2|A0A0A0K1Q2_CUCSA1.7e-1151.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1[more]
tr|A0A0A0K5N2|A0A0A0K5N2_CUCSA3.3e-0778.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046650 PE=4 SV=1[more]
tr|A0A1S3C0A5|A0A1S3C0A5_CUCME5.5e-0776.32uncharacterized protein LOC103495545 OS=Cucumis melo OX=3656 GN=LOC103495545 PE=... [more]
tr|A0A1S3C1Y6|A0A1S3C1Y6_CUCME5.5e-0776.32uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=... [more]
tr|A0A0A0K6Y8|A0A0A0K6Y8_CUCSA5.5e-0776.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1[more]
BLAST of Cla97C02G027810.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G027810.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10265.12.1e-0452.63Wound-responsive family protein[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR022251DUF3774_wound-induced
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C02G027810Cla97C02G027810gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C02G027810.1.CDS.2Cla97C02G027810.1.CDS.2CDS
Cla97C02G027810.1.CDS.1Cla97C02G027810.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C02G027810.1.exon.2Cla97C02G027810.1.exon.2exon
Cla97C02G027810.1.exon.1Cla97C02G027810.1.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C02G027810.1Cla97C02G027810.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 81..106
e-value: 3.0E-7
score: 31.3
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090FAMILY NOT NAMEDcoord: 33..74
coord: 85..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..71
NoneNo IPR availablePANTHERPTHR33090:SF21SUBFAMILY NOT NAMEDcoord: 33..74
coord: 85..107