Cla97C01G011770.1 (mRNA) Watermelon (97103) v2

NameCla97C01G011770.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr01 : 23565202 .. 23566623 (-)
Sequence length258
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAATCTTGAGTAGTGCTATTGAGCTTACTCTCACCTATGCAGATCAAGGGATAACTCTGAATAAACAGGAGTTCATAGATAGCGCAAGATTTAGATCAAGTTATCTAGGTCATTGATAAGTGAAATTAATCAGTGTTAATCGTAAACGGTGTTAATACGTAACAGTGATTATTTCAAGGTCAGTCTTACACAATCTTATTATGTAGAATACCCTCGCTCACATGTCTCTACATGAACAAATCAGGATCACTTCATTTATGACACCTTACAACATTTGTAACAATCATGAAGCAGGCGGCTGTATTCAATAGTGTCTCCAGGAATAGGTACCTAACCTGATCCATGTACTATAGACTATTGAGGCTACTTACTTGAACTTGATCCTGTTTATGTCTCCACATAAAGTCCAAGTACTCATGATAGTAGCCAAGGTTTCGTAGTTTAATTGGATTTAGAGTTAATAAATAATTAATTCACTTAAATAACTTCATATGTATTAAAATTCACCTATTTACAAAAACTACGAGTTTTAGGACATACAACCCAATAGCACCCATGACAAATAATTATTTCCATTGATGTCAAGGGGTGCAAATTCTATTGTTGTAAGATTTGCCATGATAACACTTAAGAACCTACCTTTAGCGGGAAAACAACAGGAGCTTGTGCTGATAACGTATTGTAAAATTGAGGAGCAAAATGACGGAATAACGGGAGCACAAAAATCGAGAAATTATAATATTAAAATAATAAAATAAATATAATAATTAAAAGAAATAAAATAACTAAATAAACTAAAATAAAGAAATGAAAGTGAAATTTTATGGAAAGTGGAAATCTCTCCAATACTTTCTCTTCTTTTCTCTCAAATGTTTGCTTCTCCGACATCCATCAAAGGCCACTATTTATAGGCAATTTGGCAAGTAGGTAGTGGAACTTCATGACCATTAAAAATGTGTCGTTAGGAGATATATGACCTTTAGACACTAAACTTGGCTACATAATGGACATTTATTTTCTCATAATATTTATAATACATTCTAAATTAATTGTAAGTTTATTTTTTAACTTTCTTTTTCTTTAGACTATAAATGTATTATTAAAACTTTAAAAATAGAGATGTTTTTAGAATAAAGTGCAAAGTTTAGAGTTATTTTCTCAAATGAAGGGAACGGAAGTGTGATGAAATGGAAAGTAGAGACAAAATGATTTTTTAATATTTTGAAAAACATAAACCTAATGTAAACAGGTCTCTCGGGTTGCTCCCCCTAGAATTCTCTCCCTCTCTCGGCCGATCTCCCTCCCTCAACCTCACCGTGTACCGCCGCCCCGCGCCGTCGACCTCTCAGTTTCCCTCGCCGCCGGGCCCTCAGCCACCCCCACTCTTCGCCGACCCCGCCTCAGCCTCCCTCTAA

mRNA sequence

ATGGGAGGAATCTTGAGTAGTGCTATTGAGCTTACTCTCACCTATGCAGATCAAGGGATAACTCTGAATAAACAGGAGTTCATAGATAGCGCAAGATTTAGATCAAGTTATCTAGAATTCTCTCCCTCTCTCGGCCGATCTCCCTCCCTCAACCTCACCGTGTACCGCCGCCCCGCGCCGTCGACCTCTCAGTTTCCCTCGCCGCCGGGCCCTCAGCCACCCCCACTCTTCGCCGACCCCGCCTCAGCCTCCCTCTAA

Coding sequence (CDS)

ATGGGAGGAATCTTGAGTAGTGCTATTGAGCTTACTCTCACCTATGCAGATCAAGGGATAACTCTGAATAAACAGGAGTTCATAGATAGCGCAAGATTTAGATCAAGTTATCTAGAATTCTCTCCCTCTCTCGGCCGATCTCCCTCCCTCAACCTCACCGTGTACCGCCGCCCCGCGCCGTCGACCTCTCAGTTTCCCTCGCCGCCGGGCCCTCAGCCACCCCCACTCTTCGCCGACCCCGCCTCAGCCTCCCTCTAA

Protein sequence

MGGILSSAIELTLTYADQGITLNKQEFIDSARFRSSYLEFSPSLGRSPSLNLTVYRRPAPSTSQFPSPPGPQPPPLFADPASASL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C01G011770Cla97C01G011770gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G011770.1.CDS.2Cla97C01G011770.1.CDS.2CDS
Cla97C01G011770.1.CDS.1Cla97C01G011770.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G011770.1.exon.2Cla97C01G011770.1.exon.2exon
Cla97C01G011770.1.exon.1Cla97C01G011770.1.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C01G011770.1Cla97C01G011770.1-proteinpolypeptide


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..78