Cla020725.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla020725
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Cytochrome P450 (AHRD V1 ***- B9P738_POPTR); contains Interpro domain(s) IPR001128 Cytochrome P450
Location	Chr5 : 27327899 .. 27328252 (-)
Sequence length	354

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTAGCCAGTATGGCCCATATTGGCGCCATATTCGCAAAATAATCACACTCGAACTCCTCACAAACCACCGCCTCGAGCAGTGCCAACACATTAGAATATCCGAGGTTCAAACTTCGATCAAGAAACTGTATGAGTTATGTGGGGATGGCAGAAATAATAACAAGGGAACAATGGAGATGAAGACGTGGTTTGAGGAGCTAAAAATGAGTATAATATTGAGGATAATGGTAGGAAAGCGATTCAGCTCGGCTTTTGAAGGCAGTGTTGGGGAGCAGTTTCGAGGAGCGTTGAGGGATCTTCTTTATCTGTTTGGGGCATTTGTTCCTTCAGATTCTTTCCGTTTCTAA

mRNA sequence

ATGGAGGTTAGCCAGTATGGCCCATATTGGCGCCATATTCGCAAAATAATCACACTCGAACTCCTCACAAACCACCGCCTCGAGCAGTGCCAACACATTAGAATATCCGAGGTTCAAACTTCGATCAAGAAACTGTATGAGTTATGTGGGGATGGCAGAAATAATAACAAGGGAACAATGGAGATGAAGACGTGGTTTGAGGAGCTAAAAATGAGTATAATATTGAGGATAATGGTAGGAAAGCGATTCAGCTCGGCTTTTGAAGGCAGTGTTGGGGAGCAGTTTCGAGGAGCGTTGAGGGATCTTCTTTATCTGTTTGGGGCATTTGTTCCTTCAGATTCTTTCCGTTTCTAA

Coding sequence (CDS)

ATGGAGGTTAGCCAGTATGGCCCATATTGGCGCCATATTCGCAAAATAATCACACTCGAACTCCTCACAAACCACCGCCTCGAGCAGTGCCAACACATTAGAATATCCGAGGTTCAAACTTCGATCAAGAAACTGTATGAGTTATGTGGGGATGGCAGAAATAATAACAAGGGAACAATGGAGATGAAGACGTGGTTTGAGGAGCTAAAAATGAGTATAATATTGAGGATAATGGTAGGAAAGCGATTCAGCTCGGCTTTTGAAGGCAGTGTTGGGGAGCAGTTTCGAGGAGCGTTGAGGGATCTTCTTTATCTGTTTGGGGCATTTGTTCCTTCAGATTCTTTCCGTTTCTAA

Protein sequence

MEVSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEMKTWFEELKMSIILRIMVGKRFSSAFEGSVGEQFRGALRDLLYLFGAFVPSDSFRF

Homology

[Close]

BLAST of Cla020725 vs. Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-18
Identity = 45/116 (38.79%), Postives = 72/116 (62.07%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNK--GTM 62
           ++ YGPYWR +RKI+T E L+N R+EQ  HIR+SEV+TSIK+L+++  +G  N      +
Sbjct: 125 LAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNKNESRYTLV 184

Query: 63  EMKTWFEELKMSIILRIMVGKRFSSAF--EG-SVGEQFRGALRDLLYLFGAFVPSD 114
           ++K W   L  ++++R++VGKR+      EG    ++F   +R+ + L G F  +D
Sbjct: 185 DIKQWLAYLTFNMVVRMVVGKRYFGVMHVEGKDKAQRFMKNIREFMNLMGTFTVAD 240

[Close]

BLAST of Cla020725 vs. Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.5e-17
Identity = 46/117 (39.32%), Postives = 73/117 (62.39%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRN-NNKGTME 62
           V+ YGPYWR +RKII  E+L++ R+EQ Q +R+SEVQ SI +LY++    +N ++  ++E
Sbjct: 127 VAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVE 186

Query: 63  MKTWFEELKMSIILRIMVGKRFSSA-FEGSVGEQFRGALRDLLYLFGAFVPSDSFRF 118
           +K WF +   +++LR++VGKRF SA       E+   A+ + + L G F   D+  +
Sbjct: 187 LKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCVKAVDEFMRLAGVFTVGDAIPY 243

[Close]

BLAST of Cla020725 vs. Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-16
Identity = 50/135 (37.04%), Postives = 73/135 (54.07%), Query Frame = 1


Query: 6   YGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKL-----------YELCGDGRN 65
           YG YWR +RKI+TLE+L+N R+E   HIR+SEVQTSIK+L           Y L  D ++
Sbjct: 125 YGAYWRQLRKIVTLEILSNRRIELLSHIRVSEVQTSIKELVNVWSNQISSQYGLLDDTKS 184

Query: 66  NNKG---------TMEMKTWFEELKMSIILRIMVGKRFSSAFEGSVGEQ---FRGALRDL 118
           ++           ++E+K WF +L ++++LR++VGKR     +    E+   F   +RD 
Sbjct: 185 SSTNDEPSTTDYVSVELKKWFAQLTLNMVLRMVVGKRCFGDVDVENKEEAKRFLENIRDF 244

[Close]

BLAST of Cla020725 vs. Swiss-Prot
Match: C7H23_PANGI (Cytochrome P450 CYP82H23 (Fragment) OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 9.4e-16
Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 1


Query: 6   YGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYE-LCGDGRNNNKGTMEMKT 65
           YGPYWR  RK++ +ELL+N RL+  +H+R SEV + ++++YE    +G   +K  +EMK 
Sbjct: 62  YGPYWRDTRKLLIVELLSNRRLDVLKHVRESEVNSFVREMYEQWISNGGGGSKAVVEMKE 121

Query: 66  WFEELKMSIILRIMVGKRFS-SAFEGSVGEQFRGALRDLLYLFGAFVPSDS 115
            F  L M++ILR++ GKR+S +        +F+ AL DLL+L    + SD+
Sbjct: 122 RFGYLTMNVILRMVAGKRYSGTEVYSDEARRFQKALGDLLHLVVLSMVSDA 172

[Close]

BLAST of Cla020725 vs. Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-15
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKG--TM 62
           V+ YGPYWR +RKI+  E L+  R+EQ  H+R+SEVQ+SI +L+      +N   G  T+
Sbjct: 124 VAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATV 183

Query: 63  EMKTWFEELKMSIILRIMVGKRFSSA 87
           E+K WF  L  ++ILR++ GKR+ SA
Sbjct: 184 ELKQWFSLLVFNMILRMVCGKRYFSA 209

[Close]

BLAST of Cla020725 vs. TrEMBL
Match: A0A0A0LG04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852630 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.3e-29
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNK--GTM 62
           +S YGP+WRH+RK+  LELLT+HRL++ QHIR+SEVQTSIK LYELC   + NN+    +
Sbjct: 135 LSPYGPHWRHVRKLTMLELLTSHRLQKLQHIRVSEVQTSIKNLYELCLKNKKNNEKNALV 194

Query: 63  EMKTWFEELKMSIILRIMVGKRFSSAFEGS---VGEQFRGALRDLLYLFGAFVPSDSFRF 118
           EMKTWF ++ ++ I RI+VGK+FS+A + S     E++R ALRD    FG FVPSDSF F
Sbjct: 195 EMKTWFGDITLNTISRIVVGKQFSTAVDVSNTNENEEYRKALRDFFEWFGVFVPSDSFPF 254

[Close]

BLAST of Cla020725 vs. TrEMBL
Match: A0A0A0LD49_CUCSA (Cytochrome P450 OS=Cucumis sativus GN=Csa_3G852640 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-28
Identity = 70/117 (59.83%), Postives = 82/117 (70.09%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEM 62
           +S YG YWRHIRK+ TLELLTN RL Q QHIR  EVQTSIKKLYELC     N K  +EM
Sbjct: 129 LSPYGSYWRHIRKLATLELLTNRRLHQLQHIREFEVQTSIKKLYELC---IRNKKSLVEM 188

Query: 63  KTWFEELKMSIILRIMVGKRFSSAFEGSV--GEQFRGALRDLLYLFGAFVPSDSFRF 118
            TWF ++ ++ I R++VGKRFS A +GS    + +R ALRD    FG FVPSDSF F
Sbjct: 189 NTWFGDITLNTIFRMVVGKRFSMAMDGSANGNDVYRMALRDFFEWFGVFVPSDSFPF 242

[Close]

BLAST of Cla020725 vs. TrEMBL
Match: A0A0A0LGF6_CUCSA (Cytochrome P450 OS=Cucumis sativus GN=Csa_3G852610 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-26
Identity = 60/114 (52.63%), Postives = 83/114 (72.81%), Query Frame = 1


Query: 4   SQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEMK 63
           S YG +WRHIRKI+ LELL NHR+ + QHI   EVQ SI++L+ELC   R+N K  +EM+
Sbjct: 130 SPYGSHWRHIRKIVMLELLANHRMNRLQHIPRLEVQNSIEELHELC---RSNKKAVVEME 189

Query: 64  TWFEELKMSIILRIMVGKRFSSAFEGSVGEQFRGALRDLLYLFGAFVPSDSFRF 118
            WF ++ ++ I ++++GKRFS+ FEG  GE+++ AL+D   LF AFVPSD F F
Sbjct: 190 KWFGDITLNTIFKMVIGKRFSTTFEGCHGEEYQNALKDFFNLFIAFVPSDLFPF 240

[Close]

BLAST of Cla020725 vs. TrEMBL
Match: A0A0A0LG08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G853170 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.3e-26
Identity = 70/120 (58.33%), Postives = 82/120 (68.33%), Query Frame = 1


Query: 4   SQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEMK 63
           +QYGP WRHIRKI   E+L+N RL+  QHI  SEVQ SIKKLYEL      + K  +EMK
Sbjct: 131 TQYGPLWRHIRKIANHEILSNQRLDLFQHIYKSEVQVSIKKLYELWVT-NGSEKVLVEMK 190

Query: 64  TWFEELKMSIILRIMVGKRFSSAFEGS------VGEQFRGALRDLLYLFGAFVPSDSFRF 118
            WF EL ++ I R+++GKRFS+  EGS       GEQFR ALRD L LF AFVPSDSF F
Sbjct: 191 DWFGELTLNTIFRMVLGKRFSTTVEGSSNEGSDEGEQFRQALRDFLQLFMAFVPSDSFPF 249

[Close]

BLAST of Cla020725 vs. TrEMBL
Match: A0A0A0LGG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G853150 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-25
Identity = 58/115 (50.43%), Postives = 83/115 (72.17%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEM 62
           ++QYGP+WRH+RK+++LELL+ HRL+Q Q IRISE+Q+SI KLY+LC       K  +EM
Sbjct: 139 LAQYGPFWRHMRKVVSLELLSTHRLQQFQPIRISEIQSSINKLYQLC----TKEKPLVEM 198

Query: 63  KTWFEELKMSIILRIMVGKRFSSAFEGSVGEQFRGALRDLLYLFGAFVPSDSFRF 118
           K WFE++ ++I+ +I+ GKRF+   +G   +  R   R+L+ LFG FVPSDS  F
Sbjct: 199 KAWFEDITLNIMFKIIFGKRFTDDLKGD--QDHRKTFRNLMELFGVFVPSDSLPF 247

[Close]

BLAST of Cla020725 vs. NCBI nr
Match: gi|778686466|ref|XP_004147803.2| (PREDICTED: cytochrome P450 CYP82D47-like [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-29
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNK--GTM 62
           +S YGP+WRH+RK+  LELLT+HRL++ QHIR+SEVQTSIK LYELC   + NN+    +
Sbjct: 135 LSPYGPHWRHVRKLTMLELLTSHRLQKLQHIRVSEVQTSIKNLYELCLKNKKNNEKNALV 194

Query: 63  EMKTWFEELKMSIILRIMVGKRFSSAFEGS---VGEQFRGALRDLLYLFGAFVPSDSFRF 118
           EMKTWF ++ ++ I RI+VGK+FS+A + S     E++R ALRD    FG FVPSDSF F
Sbjct: 195 EMKTWFGDITLNTISRIVVGKQFSTAVDVSNTNENEEYRKALRDFFEWFGVFVPSDSFPF 254

[Close]

BLAST of Cla020725 vs. NCBI nr
Match: gi|659129637|ref|XP_008464766.1| (PREDICTED: cytochrome P450 CYP82D47-like [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28
Identity = 70/117 (59.83%), Postives = 82/117 (70.09%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEM 62
           +S YGPYWRHIRK+ TLELLTN RL Q QHIR  EVQTSIKKLYE C     N K  +EM
Sbjct: 129 LSPYGPYWRHIRKLATLELLTNRRLHQFQHIREFEVQTSIKKLYESC---IRNKKALVEM 188

Query: 63  KTWFEELKMSIILRIMVGKRFSSAFEGSV--GEQFRGALRDLLYLFGAFVPSDSFRF 118
            TWF ++ ++ I RI+VGK+FS A +GS    E +R ALR+    FG FVPSDSF F
Sbjct: 189 NTWFGDITLNTIFRIVVGKKFSIAMDGSADRNEVYRTALREFFEWFGVFVPSDSFPF 242

[Close]

BLAST of Cla020725 vs. NCBI nr
Match: gi|778686469|ref|XP_011652396.1| (PREDICTED: cytochrome P450 CYP82D47-like [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28
Identity = 70/117 (59.83%), Postives = 82/117 (70.09%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEM 62
           +S YG YWRHIRK+ TLELLTN RL Q QHIR  EVQTSIKKLYELC     N K  +EM
Sbjct: 129 LSPYGSYWRHIRKLATLELLTNRRLHQLQHIREFEVQTSIKKLYELC---IRNKKSLVEM 188

Query: 63  KTWFEELKMSIILRIMVGKRFSSAFEGSV--GEQFRGALRDLLYLFGAFVPSDSFRF 118
            TWF ++ ++ I R++VGKRFS A +GS    + +R ALRD    FG FVPSDSF F
Sbjct: 189 NTWFGDITLNTIFRMVVGKRFSMAMDGSANGNDVYRMALRDFFEWFGVFVPSDSFPF 242

[Close]

BLAST of Cla020725 vs. NCBI nr
Match: gi|659129635|ref|XP_008464765.1| (PREDICTED: cytochrome P450 CYP82D47-like [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28
Identity = 66/117 (56.41%), Postives = 87/117 (74.36%), Query Frame = 1


Query: 3   VSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEM 62
           +S YGP+WRH+RK+  LELL+N+RLE+ QHIR+SEVQTS+K LYELC   +N     +EM
Sbjct: 129 LSPYGPHWRHVRKLAMLELLSNYRLEKLQHIRVSEVQTSMKNLYELC--LKNKKNALVEM 188

Query: 63  KTWFEELKMSIILRIMVGKRFSSAFEGS--VGEQFRGALRDLLYLFGAFVPSDSFRF 118
           KTWF ++ ++ I RI+VGK+FS+A + S    E++R ALRD    FG FVPSDSF F
Sbjct: 189 KTWFGDITLNTISRIVVGKKFSTAVDASNNENEEYRKALRDFFEWFGVFVPSDSFPF 243

[Close]

BLAST of Cla020725 vs. NCBI nr
Match: gi|449460137|ref|XP_004147802.1| (PREDICTED: cytochrome P450 CYP82D47-like [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-26
Identity = 60/114 (52.63%), Postives = 83/114 (72.81%), Query Frame = 1


Query: 4   SQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEMK 63
           S YG +WRHIRKI+ LELL NHR+ + QHI   EVQ SI++L+ELC   R+N K  +EM+
Sbjct: 130 SPYGSHWRHIRKIVMLELLANHRMNRLQHIPRLEVQNSIEELHELC---RSNKKAVVEME 189

Query: 64  TWFEELKMSIILRIMVGKRFSSAFEGSVGEQFRGALRDLLYLFGAFVPSDSFRF 118
            WF ++ ++ I ++++GKRFS+ FEG  GE+++ AL+D   LF AFVPSD F F
Sbjct: 190 KWFGDITLNTIFKMVIGKRFSTTFEGCHGEEYQNALKDFFNLFIAFVPSDLFPF 240

The following BLAST results are available for this feature:

BLAST of Cla020725 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C82A3_SOYBN	3.4e-18	38.79	Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1	[more]
C82A4_SOYBN	8.5e-17	39.32	Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1	[more]
C82A1_PEA	2.5e-16	37.04	Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2	[more]
C7H23_PANGI	9.4e-16	40.54	Cytochrome P450 CYP82H23 (Fragment) OS=Panax ginseng PE=2 SV=1	[more]
C82A2_SOYBN	4.7e-15	46.51	Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1	[more]

BLAST of Cla020725 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG04_CUCSA	2.3e-29	56.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852630 PE=3 SV=1	[more]
A0A0A0LD49_CUCSA	1.2e-28	59.83	Cytochrome P450 OS=Cucumis sativus GN=Csa_3G852640 PE=3 SV=1	[more]
A0A0A0LGF6_CUCSA	1.4e-26	52.63	Cytochrome P450 OS=Cucumis sativus GN=Csa_3G852610 PE=4 SV=1	[more]
A0A0A0LG08_CUCSA	5.3e-26	58.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G853170 PE=3 SV=1	[more]
A0A0A0LGG2_CUCSA	2.7e-25	50.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G853150 PE=3 SV=1	[more]

BLAST of Cla020725 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778686466\|ref\|XP_004147803.2\|	3.3e-29	56.67	PREDICTED: cytochrome P450 CYP82D47-like [Cucumis sativus]	[more]
gi\|659129637\|ref\|XP_008464766.1\|	1.7e-28	59.83	PREDICTED: cytochrome P450 CYP82D47-like [Cucumis melo]	[more]
gi\|778686469\|ref\|XP_011652396.1\|	1.7e-28	59.83	PREDICTED: cytochrome P450 CYP82D47-like [Cucumis sativus]	[more]
gi\|659129635\|ref\|XP_008464765.1\|	1.7e-28	56.41	PREDICTED: cytochrome P450 CYP82D47-like [Cucumis melo]	[more]
gi\|449460137\|ref\|XP_004147802.1\|	2.0e-26	52.63	PREDICTED: cytochrome P450 CYP82D47-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450

Vocabulary: **Molecular Function**
Term	Definition
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	iron ion binding
GO:0020037	heme binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla020725	Cla020725	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla020725	Cla020725.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla020725.1.cds1	Cla020725.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001128	Cytochrome P450	GENE3D	G3DSA:1.10.630.10		coord: 4..115 score: 3.8
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 6..89 score: 7.
IPR001128	Cytochrome P450	unknown	SSF48264	Cytochrome P450	coord: 4..115 score: 1.44
None	No IPR available	PANTHER	PTHR24298	FAMILY NOT NAMED	coord: 6..114 score: 1.8
None	No IPR available	PANTHER	PTHR24298:SF74	SUBFAMILY NOT NAMED	coord: 6..114 score: 1.8