Cla015961.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla015961
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Guanine nucleotide-binding protein subunit beta-like protein (AHRD V1 *- GBLP_TRYBR); contains Interpro domain(s) IPR017986 WD40 repeat, region
Location	Chr2 : 5484497 .. 5486172 (-)
Sequence length	582

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACGGGCTCCAATGATTACAGATTGCGGTGCGAGCTCACTGGTCATGAAGACGACGTAAGAGATGAATTACTCTAATTCTCTTTGACCTGTTAATTGCTTCTTAGTTTGCAACAATTTCATACTCCACCATTTGCTTCCACAATCTTCTCTTAGCAATGTCAATGTTTATTTGAATTGCGCGTTTGTTTAAGGTAGAGTCTGACCTTAATCTTACTGAACTTGTATAATTAGGTTCGTGGAATTTGCGTGTGCGGAAATGAGGGGATTGCCACTTCGTCGAGGGACAAAACTGTGAGGTTTTGGAATTTGGATGGACGGAAGTATGTAGAATCGAAAATCCTGCTAGGGCATACGAGTTTTGTGGGTCCTTTGGCTTGGATTTCGCCGGATGAGGAGTACCCCGAGGGGGGAATTGTGTCTGGTGGAATGGATACACTCGTCATTGTTTGGGACTTAAGAACGGGTGAGAAGGTGCAGACGCTTAAGGGCCATCAGCAGCAAGTCACTGGCATTACGTTGGATAATGGTGACATTGTGTCATCCTCTGTTGACTGGTAATTTAGTTCCCTAGTTGTGATCTTCCTCTGGGTTTAGGAGTAGGAGTAGAATTTACAAGGTGTTGCAAAGCGTATGCATTATAAGATTTGGTTGTTTTTCTCAATCGTTTTGGTGAGATCTATATCAACATACTGAGTCTGAAATGTGGACGTTCTTGCATGATAGGATGTTGTATTAGTACCTTTTTTTTTTAATATATATATTTATATATGGAACAGGTTTTAATATGCATGGATTAGCTTCTAAATTTGATTTTCACCAAAACTGAAGCTGATTTTCCATTGGTACACAAATCTTTTTGGTGCACTAGGTTTTCTGCTTAGTGTTTGTGGCATTTACATACTTTATACAAGACAAAACGTGTGATATTGGCTTCTTTACTCCAGTACTTTAAGGAGGTGGAGAAATGGCAAAGTGATGGAGGTTTGGGGTGCTCATAATGCTGCCATTCAATCAGTTATAAAGCTTCCATCAGGCGAACTGGTCACAGGTACTACTTCAAATAGGGACTGGAGTCTGTTTGAGTTATAATTTAGATAAGCTTTGCCCCATTCTCCCTTTGTGTATCCTGGTTTCAAATTCATCAGTGCTTTCATTACGATTTTTTTTTTTTTTTTTTGAAAGAAAACAAATTTTTCATTGATTTAATGAAAAGAGACTAATACTCATATTACAATTGCAGTGCTTTCATTATGATTGAGCCTTGATTCAGCAACATTTATGTTATGTTTCAAACCATATGATATTGGTGCAAACTACATTTTGACATTATTGGACTACCGTGTAGTGTTTACCCCACTTATCTTATTATTTGTATAAAATTGATCTCTGTTAATCATTTTGATATACATTTTAATTTGTTACAAAGATCCATGAGGAAAATAATTTCGATGGTCTTTAAAGAGAAAACATCTGAGGAATTCTTGGAATGAGTTAATACTCTCCATCCAAGAGAGATGACCATCCTCACCTTTCCTATCTGATTCTCACCTTTCCTATCTGATTGGTGCGTGTTAGGTCATTTTGTTTCTGGGATCACCCAAGATAAGAATAGAGCCAGATGCTTCATCTTAGACATTAAGGATCTTGGTAGATGGGTGTTTGAACTCTGA

mRNA sequence

ATGGAGACGGGCTCCAATGATTACAGATTGCGGTGCGAGCTCACTGGTCATGAAGACGACGTTCGTGGAATTTGCGTGTGCGGAAATGAGGGGATTGCCACTTCGTCGAGGGACAAAACTGTGAGGTTTTGGAATTTGGATGGACGGAAGTATGTAGAATCGAAAATCCTGCTAGGGCATACGAGTTTTGTGGGTCCTTTGGCTTGGATTTCGCCGGATGAGGAGTACCCCGAGGGGGGAATTGTGTCTGGTGGAATGGATACACTCGTCATTGTTTGGGACTTAAGAACGGGTGAGAAGGTGCAGACGCTTAAGGGCCATCAGCAGCAAGTCACTGGCATTACGTTGGATAATGGTGACATTGTGTCATCCTCTGTTGACTGTACTTTAAGGAGGTGGAGAAATGGCAAAGTGATGGAGGTTTGGGGTGCTCATAATGCTGCCATTCAATCAGTTATAAAGCTTCCATCAGGCGAACTGGTCACAGGTCATTTTGTTTCTGGGATCACCCAAGATAAGAATAGAGCCAGATGCTTCATCTTAGACATTAAGGATCTTGGTAGATGGGTGTTTGAACTCTGA

Coding sequence (CDS)

ATGGAGACGGGCTCCAATGATTACAGATTGCGGTGCGAGCTCACTGGTCATGAAGACGACGTTCGTGGAATTTGCGTGTGCGGAAATGAGGGGATTGCCACTTCGTCGAGGGACAAAACTGTGAGGTTTTGGAATTTGGATGGACGGAAGTATGTAGAATCGAAAATCCTGCTAGGGCATACGAGTTTTGTGGGTCCTTTGGCTTGGATTTCGCCGGATGAGGAGTACCCCGAGGGGGGAATTGTGTCTGGTGGAATGGATACACTCGTCATTGTTTGGGACTTAAGAACGGGTGAGAAGGTGCAGACGCTTAAGGGCCATCAGCAGCAAGTCACTGGCATTACGTTGGATAATGGTGACATTGTGTCATCCTCTGTTGACTGTACTTTAAGGAGGTGGAGAAATGGCAAAGTGATGGAGGTTTGGGGTGCTCATAATGCTGCCATTCAATCAGTTATAAAGCTTCCATCAGGCGAACTGGTCACAGGTCATTTTGTTTCTGGGATCACCCAAGATAAGAATAGAGCCAGATGCTTCATCTTAGACATTAAGGATCTTGGTAGATGGGTGTTTGAACTCTGA

Protein sequence

METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDGRKYVESKILLGHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGDIVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTGHFVSGITQDKNRARCFILDIKDLGRWVFEL

Homology

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BLAST of Cla015961 vs. Swiss-Prot
Match: PLAP_XENLA (Phospholipase A-2-activating protein OS=Xenopus laevis GN=plaa PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 63/167 (37.72%), Postives = 92/167 (55.09%), Query Frame = 1


Query: 4   GSNDYRLRCELTGHEDDVRGICVCG---NEGIATSSRDKTVRFWNLDG--RKYVESKILL 63
           G + YRLRC L GHE DVRG+  C     EG  + SRD++ R W  D   R ++E + + 
Sbjct: 9   GDSCYRLRCSLLGHELDVRGVARCPLWPGEGFVSVSRDRSSRLWVPDSPNRGFIELQRMS 68

Query: 64  GHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDN 123
           GH++FV  +  + P + YP G I +GG D  + V+ L + + + TLKGH+  V  ++   
Sbjct: 69  GHSNFVSCVCILPPSDLYPRGLIATGGNDQNICVFSLDSEKPLYTLKGHKNTVCSLSSGK 128

Query: 124 -GDIVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLP-SGELVTG 164
            G ++S S D T + W N K M     H AA+ +V  LP  G ++TG
Sbjct: 129 FGTLLSGSWDTTGKVWLNDKCMMTLQGHTAAVWAVKILPEQGLMLTG 175

[Close]

BLAST of Cla015961 vs. Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.5e-13
Identity = 51/168 (30.36%), Postives = 79/168 (47.02%), Query Frame = 1


Query: 7   DYRLRCELTGHEDDVRGICVCGN-EGIATSSRDKTVRFWNLDGRKYVESKILLGHTSFVG 66
           +Y L+C L GH + V  +    N E +A+SS D+ +  W     KY   K L GH   + 
Sbjct: 30  NYALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKY--EKTLYGHNLEIS 89

Query: 67  PLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQV--TGITLDNGDIVS 126
            +AW S         +VS   D  + +WD+R+G+ ++TLKGH   V        +  I+S
Sbjct: 90  DVAWSSDSSR-----LVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIIS 149

Query: 127 SSVDCTLRRW--RNGKVMEVWGAHNAAIQSVIKLPSGELVTGHFVSGI 170
            S D T++ W  + GK ++   AH+  + +V    SG L+      G+
Sbjct: 150 GSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGL 190

HSP 2 Score: 53.9 bits (128), Expect = 2.2e-06
Identity = 45/183 (24.59%), Postives = 83/183 (45.36%), Query Frame = 1


Query: 4   GSNDYRLRCELTGHEDDVRGICVCGNEG-IATSSRDKTVRFWNLDGRKYVESKILLGHTS 63
           G+ D +    L GH  ++  +    +   + ++S DKT++ W++   K +  K L GH++
Sbjct: 69  GAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCL--KTLKGHSN 128

Query: 64  FVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGI--TLDNGD 123
           +V        +   P   I+SG  D  V +W+++TG+ ++TL  H   V+ +        
Sbjct: 129 YV-----FCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSL 188

Query: 124 IVSSSVDCTLRRW--RNGKVMEVWGAHNAAIQSVIKL-PSGELVTGHFVSGITQ--DKNR 179
           IVS S D   R W   +G+ ++     +    S +K  P+G+ +    +    +  D +R
Sbjct: 189 IVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSR 244

HSP 3 Score: 39.7 bits (91), Expect = 4.4e-02
Identity = 31/107 (28.97%), Postives = 48/107 (44.86%), Query Frame = 1


Query: 32  IATSSRDKTVRFWNLDGRKYVESKILLGHTSFVGPLAWISPDEEYPEGG-IVSGGMDTLV 91
           I T++ D T++ W+     Y   + L  +T        I  +     G  IVSG  D LV
Sbjct: 225 ILTATLDNTLKLWD-----YSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 284

Query: 92  IVWDLRTGEKVQTLKGHQQQVTGITL-DNGDIVSSSV---DCTLRRW 134
            +W+L+T E VQ L+GH   V         ++++S+    D T++ W
Sbjct: 285 YIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAALENDKTIKLW 326

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BLAST of Cla015961 vs. Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.4e-13
Identity = 50/168 (29.76%), Postives = 79/168 (47.02%), Query Frame = 1


Query: 7   DYRLRCELTGHEDDVRGICVCGN-EGIATSSRDKTVRFWNLDGRKYVESKILLGHTSFVG 66
           +Y L+C L GH + V  +    N E +A+SS D+ +  W     KY   + L GH   + 
Sbjct: 30  NYALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKY--ERTLYGHNLEIS 89

Query: 67  PLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQV--TGITLDNGDIVS 126
            +AW S         +VS   D  + +WD+R+G+ ++TLKGH   V        +  I+S
Sbjct: 90  DVAWSSDSSR-----LVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIIS 149

Query: 127 SSVDCTLRRW--RNGKVMEVWGAHNAAIQSVIKLPSGELVTGHFVSGI 170
            S D T++ W  + GK ++   AH+  + +V    SG L+      G+
Sbjct: 150 GSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGL 190

HSP 2 Score: 54.3 bits (129), Expect = 1.7e-06
Identity = 45/183 (24.59%), Postives = 83/183 (45.36%), Query Frame = 1


Query: 4   GSNDYRLRCELTGHEDDVRGICVCGNEG-IATSSRDKTVRFWNLDGRKYVESKILLGHTS 63
           G+ D +    L GH  ++  +    +   + ++S DKT++ W++   K +  K L GH++
Sbjct: 69  GAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCL--KTLKGHSN 128

Query: 64  FVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGI--TLDNGD 123
           +V        +   P   I+SG  D  V +W+++TG+ ++TL  H   V+ +        
Sbjct: 129 YV-----FCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSL 188

Query: 124 IVSSSVDCTLRRW--RNGKVMEVWGAHNAAIQSVIKL-PSGELVTGHFVSGITQ--DKNR 179
           IVS S D   R W   +G+ ++     +    S +K  P+G+ +    +    +  D +R
Sbjct: 189 IVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSR 244

HSP 3 Score: 39.7 bits (91), Expect = 4.4e-02
Identity = 31/107 (28.97%), Postives = 48/107 (44.86%), Query Frame = 1


Query: 32  IATSSRDKTVRFWNLDGRKYVESKILLGHTSFVGPLAWISPDEEYPEGG-IVSGGMDTLV 91
           I T++ D T++ W+     Y   + L  +T        I  +     G  IVSG  D LV
Sbjct: 225 ILTATLDNTLKLWD-----YSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 284

Query: 92  IVWDLRTGEKVQTLKGHQQQVTGITL-DNGDIVSSSV---DCTLRRW 134
            +W+L+T E VQ L+GH   V         ++++S+    D T++ W
Sbjct: 285 YIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAALENDKTIKLW 326

[Close]

BLAST of Cla015961 vs. Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.7e-12
Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = 1


Query: 7   DYRLRCELTGHEDDVRGICVCGN-EGIATSSRDKTVRFWNLDGRKYVESKILLGHTSFVG 66
           +Y L+  L GH   V  +    N E +A+SS DK ++ W     K+   K + GH   + 
Sbjct: 61  NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGIS 120

Query: 67  PLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQV--TGITLDNGDIVS 126
            +AW S         +VSG  D  + VW+L TG+ ++TLKGH   V        +  IVS
Sbjct: 121 DVAWSSDSRL-----LVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVS 180

Query: 127 SSVDCTLRRW--RNGKVMEVWGAHNAAIQSVIKLPSGELVTGHFVSGI 170
            S D ++R W  R GK ++   AH+  + +V     G L+      G+
Sbjct: 181 GSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 221

HSP 2 Score: 38.9 bits (89), Expect = 7.5e-02
Identity = 31/109 (28.44%), Postives = 50/109 (45.87%), Query Frame = 1


Query: 32  IATSSRDKTVRFWNLDGRKYVESKILLGHTSFVGPLAWISPDEEYPEGG-IVSGGMDTLV 91
           I  ++ D T++ W+     Y + K L  +T        I  +     G  IVSG  D +V
Sbjct: 256 ILAATLDNTLKLWD-----YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMV 315

Query: 92  IVWDLRTGEKVQTLKGHQQQV--TGITLDNGDIVSSSV--DCTLRRWRN 136
            +W+L++ E VQ L+GH   V  T        I S+++  D T++ W++
Sbjct: 316 YIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359

[Close]

BLAST of Cla015961 vs. Swiss-Prot
Match: Y2800_NOSS1 (Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-11
Identity = 49/177 (27.68%), Postives = 90/177 (50.85%), Query Frame = 1


Query: 1    METGSNDYRLRC----------ELTGHEDDVRGICVC-GNEGIATSSRDKTVRFWNLDGR 60
            + +GSND  ++            L GH D + GI     ++ +A++S D +VR WN+   
Sbjct: 951  LASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTG 1010

Query: 61   KYVESKILLGHTSFVGPLAWISPDEEYPEGGIVS-GGMDTLVIVWDLRTGEKVQTLKGHQ 120
            +  +  ILL HT +V  + +      +P+G I++ G  D  V +W++ TG+ ++TL  H 
Sbjct: 1011 QCFQ--ILLEHTDWVYAVVF------HPQGKIIATGSADCTVKLWNISTGQCLKTLSEHS 1070

Query: 121  QQVTGI--TLDNGDIVSSSVDCTLRRWR--NGKVMEVWGAHNAAIQSVIKLPSGELV 162
             ++ G+  + D   + S+S D ++R W    G+ + +   H+  + S I  P+GE++
Sbjct: 1071 DKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEII 1119

HSP 2 Score: 63.2 bits (152), Expect = 3.7e-09
Identity = 43/153 (28.10%), Postives = 78/153 (50.98%), Query Frame = 1


Query: 14   LTGHEDDVRGICVCGN-EGIATSSRDKTVRFWNLDGRKYVESKILLGHTSFVGPLAWISP 73
            L GH ++V  +    + + +A  S D++VR WN    + +  K   G+T +  P+A+ SP
Sbjct: 890  LHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCL--KAWYGNTDWALPVAF-SP 949

Query: 74   DEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITL--DNGDIVSSSVDCTL 133
            D +     + SG  D  V +WD +TG+ + +L+GH   + GI    D+  + S+S D ++
Sbjct: 950  DRQI----LASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSV 1009

Query: 134  RRWR--NGKVMEVWGAHNAAIQSVIKLPSGELV 162
            R W    G+  ++   H   + +V+  P G+++
Sbjct: 1010 RLWNISTGQCFQILLEHTDWVYAVVFHPQGKII 1035

HSP 3 Score: 62.4 bits (150), Expect = 6.3e-09
Identity = 42/153 (27.45%), Postives = 78/153 (50.98%), Query Frame = 1


Query: 14  LTGHEDDVRGICVCGN-EGIATSSRDKTVRFWNLDGRKYVESKILLGHTSFVGPLAWISP 73
           LTGHE +V  +    + E +A++S DKT++ W++     +++  L GHT +V  +A+ SP
Sbjct: 722 LTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQT--LTGHTDWVRCVAF-SP 781

Query: 74  DEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGI--TLDNGDIVSSSVDCTL 133
           D       + S   D  + +WD+  G+ ++TLK H   V  +  + D   + S S D T+
Sbjct: 782 DGNT----LASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTI 841

Query: 134 RRW--RNGKVMEVWGAHNAAIQSVIKLPSGELV 162
           + W    G+ ++ +  H  ++ S+   P  +++
Sbjct: 842 KIWNYHTGECLKTYIGHTNSVYSIAYSPDSKIL 867

HSP 4 Score: 53.9 bits (128), Expect = 2.2e-06
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 1


Query: 14   LTGHEDDVRGICVCGNEGI-ATSSRDKTVRFWNLDGRKYVESKILLGHTSFVGPLAWISP 73
            LTGH + V  I    +  I A++S D+TVR W+++  K     I +GHT  V  +A+ SP
Sbjct: 1142 LTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKC--HHICIGHTHLVSSVAF-SP 1201

Query: 74   DEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQ----QQVTGIT 116
            D E     + SG  D  V +W+++TGE +Q L+  +      +TG+T
Sbjct: 1202 DGEV----VASGSQDQTVRIWNVKTGECLQILRAKRLYEGMNITGVT 1241

HSP 5 Score: 50.8 bits (120), Expect = 1.9e-05
Identity = 38/131 (29.01%), Postives = 62/131 (47.33%), Query Frame = 1


Query: 32  IATSSRDKTVRFWNLDGRKYVESKILLGHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVI 91
           +AT   D  VR W +   K +   I  GH+++V  + + SPD E     + S G D  V 
Sbjct: 657 LATCDTDCHVRVWEVKSGKLL--LICRGHSNWVRFVVF-SPDGEI----LASCGADENVK 716

Query: 92  VWDLRTGEKVQTLKGHQQQVTGITL--DNGDIVSSSVDCTLRRW--RNGKVMEVWGAHNA 151
           +W +R G  ++TL GH+ +V  +    D   + S+S D T++ W  ++G  ++    H  
Sbjct: 717 LWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTD 776

Query: 152 AIQSVIKLPSG 159
            ++ V   P G
Sbjct: 777 WVRCVAFSPDG 780

[Close]

BLAST of Cla015961 vs. TrEMBL
Match: A0A0A0K4Y1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075640 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-84
Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDGRKYVESKILLGH 60
           METG + Y+LRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWN DGRKYVESKILLGH
Sbjct: 1   METGHSGYKLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNSDGRKYVESKILLGH 60

Query: 61  TSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD 120
           TSFVGPLAWISPDEE+PEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD
Sbjct: 61  TSFVGPLAWISPDEEFPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD 120

Query: 121 IVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
           IVSSSVDCTLRRWRNG+V+E WGAHNAAIQSVIKLPSG LVTG
Sbjct: 121 IVSSSVDCTLRRWRNGQVLEFWGAHNAAIQSVIKLPSGVLVTG 163

[Close]

BLAST of Cla015961 vs. TrEMBL
Match: A0A061E0I9_THECC (Transducin family protein / WD-40 repeat family protein OS=Theobroma cacao GN=TCM_007281 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.8e-72
Identity = 133/166 (80.12%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDG---RKYVESKIL 60
           ME    +Y+LRC L GHEDDVRGICVCG+EGIATSSRD+TVRFW+LD    RKYV SKIL
Sbjct: 4   MEIDFKEYQLRCHLRGHEDDVRGICVCGSEGIATSSRDRTVRFWSLDSSDKRKYVSSKIL 63

Query: 61  LGHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLD 120
           LGH+SFVGPLAWISPDEE+PEGGIVSGGMDT+V VWDLRTGEKVQ+LKGHQ QVTG+ LD
Sbjct: 64  LGHSSFVGPLAWISPDEEFPEGGIVSGGMDTMVFVWDLRTGEKVQSLKGHQLQVTGVLLD 123

Query: 121 NGDIVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
           NGDIVSSSVDCTLRRWRNG+ +E W AH +AIQ+VIKLPSGELV+G
Sbjct: 124 NGDIVSSSVDCTLRRWRNGQPVESWEAHKSAIQAVIKLPSGELVSG 169

[Close]

BLAST of Cla015961 vs. TrEMBL
Match: A0A0D2VZI3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146700 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.8e-70
Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDG---RKYVESKIL 60
           ME     Y+LRC+L GHEDDVRGICVCG+EGIATSSRD+TVRFW+LD    RKYV SK+L
Sbjct: 4   MEIDFKQYQLRCQLRGHEDDVRGICVCGSEGIATSSRDRTVRFWSLDSSDKRKYVSSKML 63

Query: 61  LGHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLD 120
           LGH+SFVGPLAWI+PDEE+PEGGIVSGGMDT+V VWDLRTGEKVQ+LKGHQ QVTG+ LD
Sbjct: 64  LGHSSFVGPLAWIAPDEEFPEGGIVSGGMDTMVFVWDLRTGEKVQSLKGHQLQVTGVVLD 123

Query: 121 NGDIVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
            GDI+SSSVDCTLRRWR G+ +E W AH +AIQ+VIKLPSGELV+G
Sbjct: 124 GGDIISSSVDCTLRRWRKGQPVESWEAHKSAIQAVIKLPSGELVSG 169

[Close]

BLAST of Cla015961 vs. TrEMBL
Match: A0A0D2S3B9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146700 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.8e-70
Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDG---RKYVESKIL 60
           ME     Y+LRC+L GHEDDVRGICVCG+EGIATSSRD+TVRFW+LD    RKYV SK+L
Sbjct: 4   MEIDFKQYQLRCQLRGHEDDVRGICVCGSEGIATSSRDRTVRFWSLDSSDKRKYVSSKML 63

Query: 61  LGHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLD 120
           LGH+SFVGPLAWI+PDEE+PEGGIVSGGMDT+V VWDLRTGEKVQ+LKGHQ QVTG+ LD
Sbjct: 64  LGHSSFVGPLAWIAPDEEFPEGGIVSGGMDTMVFVWDLRTGEKVQSLKGHQLQVTGVVLD 123

Query: 121 NGDIVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
            GDI+SSSVDCTLRRWR G+ +E W AH +AIQ+VIKLPSGELV+G
Sbjct: 124 GGDIISSSVDCTLRRWRKGQPVESWEAHKSAIQAVIKLPSGELVSG 169

[Close]

BLAST of Cla015961 vs. TrEMBL
Match: A0A0D2V5H3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146700 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.8e-70
Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDG---RKYVESKIL 60
           ME     Y+LRC+L GHEDDVRGICVCG+EGIATSSRD+TVRFW+LD    RKYV SK+L
Sbjct: 4   MEIDFKQYQLRCQLRGHEDDVRGICVCGSEGIATSSRDRTVRFWSLDSSDKRKYVSSKML 63

Query: 61  LGHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLD 120
           LGH+SFVGPLAWI+PDEE+PEGGIVSGGMDT+V VWDLRTGEKVQ+LKGHQ QVTG+ LD
Sbjct: 64  LGHSSFVGPLAWIAPDEEFPEGGIVSGGMDTMVFVWDLRTGEKVQSLKGHQLQVTGVVLD 123

Query: 121 NGDIVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
            GDI+SSSVDCTLRRWR G+ +E W AH +AIQ+VIKLPSGELV+G
Sbjct: 124 GGDIISSSVDCTLRRWRKGQPVESWEAHKSAIQAVIKLPSGELVSG 169

[Close]

BLAST of Cla015961 vs. NCBI nr
Match: gi|659109779|ref|XP_008454875.1| (PREDICTED: phospholipase A-2-activating protein [Cucumis melo])

HSP 1 Score: 322.0 bits (824), Expect = 7.1e-85
Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDGRKYVESKILLGH 60
           METG N Y+LRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWN DGRKYVESKILLGH
Sbjct: 1   METGHNGYKLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNSDGRKYVESKILLGH 60

Query: 61  TSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD 120
           TSFVGPLAWISPDEE+PEGGIVSGGMDTLVIVWD+RTGEKVQTLKGHQQQVTGITLDNGD
Sbjct: 61  TSFVGPLAWISPDEEFPEGGIVSGGMDTLVIVWDMRTGEKVQTLKGHQQQVTGITLDNGD 120

Query: 121 IVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
           IVSSSVDCTLRRWRNG+V+E WGAHNAAIQSVIKLPSG LVTG
Sbjct: 121 IVSSSVDCTLRRWRNGQVLEFWGAHNAAIQSVIKLPSGVLVTG 163

[Close]

BLAST of Cla015961 vs. NCBI nr
Match: gi|778725289|ref|XP_011658928.1| (PREDICTED: LOW QUALITY PROTEIN: phospholipase A-2-activating protein [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 1.6e-84
Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDGRKYVESKILLGH 60
           METG + Y+LRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWN DGRKYVESKILLGH
Sbjct: 1   METGHSGYKLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNSDGRKYVESKILLGH 60

Query: 61  TSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD 120
           TSFVGPLAWISPDEE+PEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD
Sbjct: 61  TSFVGPLAWISPDEEFPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD 120

Query: 121 IVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
           IVSSSVDCTLRRWRNG+V+E WGAHNAAIQSVIKLPSG LVTG
Sbjct: 121 IVSSSVDCTLRRWRNGQVLEFWGAHNAAIQSVIKLPSGVLVTG 163

[Close]

BLAST of Cla015961 vs. NCBI nr
Match: gi|700188751|gb|KGN43984.1| (hypothetical protein Csa_7G075640 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 1.6e-84
Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDGRKYVESKILLGH 60
           METG + Y+LRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWN DGRKYVESKILLGH
Sbjct: 1   METGHSGYKLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNSDGRKYVESKILLGH 60

Query: 61  TSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD 120
           TSFVGPLAWISPDEE+PEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD
Sbjct: 61  TSFVGPLAWISPDEEFPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLDNGD 120

Query: 121 IVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
           IVSSSVDCTLRRWRNG+V+E WGAHNAAIQSVIKLPSG LVTG
Sbjct: 121 IVSSSVDCTLRRWRNGQVLEFWGAHNAAIQSVIKLPSGVLVTG 163

[Close]

BLAST of Cla015961 vs. NCBI nr
Match: gi|590687648|ref|XP_007042723.1| (Transducin family protein / WD-40 repeat family protein [Theobroma cacao])

HSP 1 Score: 278.9 bits (712), Expect = 6.8e-72
Identity = 133/166 (80.12%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDG---RKYVESKIL 60
           ME    +Y+LRC L GHEDDVRGICVCG+EGIATSSRD+TVRFW+LD    RKYV SKIL
Sbjct: 4   MEIDFKEYQLRCHLRGHEDDVRGICVCGSEGIATSSRDRTVRFWSLDSSDKRKYVSSKIL 63

Query: 61  LGHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLD 120
           LGH+SFVGPLAWISPDEE+PEGGIVSGGMDT+V VWDLRTGEKVQ+LKGHQ QVTG+ LD
Sbjct: 64  LGHSSFVGPLAWISPDEEFPEGGIVSGGMDTMVFVWDLRTGEKVQSLKGHQLQVTGVLLD 123

Query: 121 NGDIVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
           NGDIVSSSVDCTLRRWRNG+ +E W AH +AIQ+VIKLPSGELV+G
Sbjct: 124 NGDIVSSSVDCTLRRWRNGQPVESWEAHKSAIQAVIKLPSGELVSG 169

[Close]

BLAST of Cla015961 vs. NCBI nr
Match: gi|763810709|gb|KJB77611.1| (hypothetical protein B456_012G146700 [Gossypium raimondii])

HSP 1 Score: 271.9 bits (694), Expect = 8.4e-70
Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 1


Query: 1   METGSNDYRLRCELTGHEDDVRGICVCGNEGIATSSRDKTVRFWNLDG---RKYVESKIL 60
           ME     Y+LRC+L GHEDDVRGICVCG+EGIATSSRD+TVRFW+LD    RKYV SK+L
Sbjct: 4   MEIDFKQYQLRCQLRGHEDDVRGICVCGSEGIATSSRDRTVRFWSLDSSDKRKYVSSKML 63

Query: 61  LGHTSFVGPLAWISPDEEYPEGGIVSGGMDTLVIVWDLRTGEKVQTLKGHQQQVTGITLD 120
           LGH+SFVGPLAWI+PDEE+PEGGIVSGGMDT+V VWDLRTGEKVQ+LKGHQ QVTG+ LD
Sbjct: 64  LGHSSFVGPLAWIAPDEEFPEGGIVSGGMDTMVFVWDLRTGEKVQSLKGHQLQVTGVVLD 123

Query: 121 NGDIVSSSVDCTLRRWRNGKVMEVWGAHNAAIQSVIKLPSGELVTG 164
            GDI+SSSVDCTLRRWR G+ +E W AH +AIQ+VIKLPSGELV+G
Sbjct: 124 GGDIISSSVDCTLRRWRKGQPVESWEAHKSAIQAVIKLPSGELVSG 169

The following BLAST results are available for this feature:

BLAST of Cla015961 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLAP_XENLA	1.1e-21	37.72	Phospholipase A-2-activating protein OS=Xenopus laevis GN=plaa PE=2 SV=2	[more]
WDR5B_HUMAN	5.5e-13	30.36	WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1	[more]
WDR5B_PONAB	9.4e-13	29.76	WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1	[more]
WDS_DROME	4.7e-12	30.95	Protein will die slowly OS=Drosophila melanogaster GN=wds PE=1 SV=1	[more]
Y2800_NOSS1	5.2e-11	27.68	Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7...	[more]

BLAST of Cla015961 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4Y1_CUCSA	1.1e-84	93.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075640 PE=4 SV=1	[more]
A0A061E0I9_THECC	4.8e-72	80.12	Transducin family protein / WD-40 repeat family protein OS=Theobroma cacao GN=TC...	[more]
A0A0D2VZI3_GOSRA	5.8e-70	77.11	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146700 PE=4 SV=1	[more]
A0A0D2S3B9_GOSRA	5.8e-70	77.11	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146700 PE=4 SV=1	[more]
A0A0D2V5H3_GOSRA	5.8e-70	77.11	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146700 PE=4 SV=1	[more]

BLAST of Cla015961 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109779\|ref\|XP_008454875.1\|	7.1e-85	93.87	PREDICTED: phospholipase A-2-activating protein [Cucumis melo]	[more]
gi\|778725289\|ref\|XP_011658928.1\|	1.6e-84	93.87	PREDICTED: LOW QUALITY PROTEIN: phospholipase A-2-activating protein [Cucumis sa...	[more]
gi\|700188751\|gb\|KGN43984.1\|	1.6e-84	93.87	hypothetical protein Csa_7G075640 [Cucumis sativus]	[more]
gi\|590687648\|ref\|XP_007042723.1\|	6.8e-72	80.12	Transducin family protein / WD-40 repeat family protein [Theobroma cacao]	[more]
gi\|763810709\|gb\|KJB77611.1\|	8.4e-70	77.11	hypothetical protein B456_012G146700 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR020472	G-protein_beta_WD-40_rep

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla015961	Cla015961	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla015961	Cla015961.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla015961.1.cds4	Cla015961.1.cds4	CDS
Cla015961.1.cds3	Cla015961.1.cds3	CDS
Cla015961.1.cds2	Cla015961.1.cds2	CDS
Cla015961.1.cds1	Cla015961.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 13..45 score: 7.9E-5coord: 98..133 score: 0
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 50..94 score: 9.5coord: 7..45 score: 3.8E-6coord: 97..134 score: 0
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 81..103 score: 9.874coord: 14..54 score: 10
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 9..161 score: 7.2
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 14..133 score: 20
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 7..164 score: 2.14
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 32..46 score: -coord: 81..95 scor
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 81..95 score: 4.0E-5coord: 32..46 score: 4.0E-5coord: 121..135 score: 4.
None	No IPR available	PANTHER	PTHR19849	PHOSPHOLIPASE A-2-ACTIVATING PROTEIN	coord: 2..163 score: 8.3