Cla015854.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla015854
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	EF-hands-containing protein (Fragment) (AHRD V1 -- F1BQA6_PINMU); contains Interpro domain(s) IPR002048 Calcium-binding EF-hand
Location	Chr2 : 4163980 .. 4166763 (-)
Sequence length	1125

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTGCTTCTTCACCACCTTCATCATCATCTTCACCATTGAAACGACCTACTGGACAGGTTCTGGACGGTTCAGAAATTATGGAGTTGGTTGCCAACAACCAAGTCTTCTCCTCTTTCGTCGACCATAAGTTTCACGAGCTCGACACCGACAAAGACGGCAAACTTTCCCTCAAAGAACTTCACCCTGCCGTCGCCGACATTGGTGCCGCTCTTGGCCTTCCTCCTCAAGGCACTTCCCTTGATTCCGACAACATTTACTCTGAGGTTTCTTTTCCTTCCTCCTCTTTTCTCCTTTTCATTCACTTCTTCTTATTCTTCATTAGGTTTCCTTGATTATTTACTGCCGAATTACTTGGATTGGAATTTCCCAATGCGATTTCCGGATAACGACAAGAACTGTCCCTATTTGTGTAGTTTGTTGCTTCTCTAGTTGCTGATTGCTTGCTACTTCTGTTTTCGTTTGAATGATTTGATTTGATCTATACATATTGGAGTCTGTTGGTGATCAATCTGATGATCAGTTTGTCCACTACTGGATTTGAGAGACCACAATTATGGTGTTATTAAATTTGATGAAAGTTCTGTTCATCTTTTCTCTTTTTAACTCTGACCTTGATAAATTAAACACAGTTTTGATTATGTTTAAATGCTCTATGTTTATGTCCAAACGTGCAATTGGGAGAATATTTAATGCGTGGATTTTGAATAGTTTAATGAGGATTATTTTATTGTATAAGCTAGACAAAGATCCCATTTCATATTTTACTTCAAAAGGACCGTCCAAATATTATAACATGGTAATGCCAGCCCTTCACAAGGGTTACTTCAAATTTGATGATTGTGATGATGATCTAAAGGTTTAGTGGGTAATGATGATTTTACTTTCCCTTCTTGGTCTACAAAATACAAATTATTATTTTCCATTTACAGATAGCTTGAGAAGTATCCAACTTATGGTCCAACATGGCCGGTGGGTTCATTACAACTTTCTGGTTTTCCCTTTTCAGTTCATATTCTCTTTTCCTTTTTGACTTTTTTTCTTTTATTACTTTTTTCTTTTCTTTCTTTCTTGGTTCTTTTATCTTCATGTACAAGGAGGAATCTATGACGAGTGCTTTGAAAACTATACCCCTTTTTATCATTAACAATGTTAGAATTGTCAACATCTGACATCAATAATAATAAAGCAAGTTTCCTGCTTCAATAATTAAGCAAAAGAAGTGGATGATCTATGTATAAACAATTAAGGCTTTTGTTGATAAAACTGTTCTTGTTTCCTACTTGTCTTTTTTTGCCAAAATATATTGCACATTTTCAAATTTTGGCAGGTTGTGATACTACTTCTGACTTTGTTTCCTTGAGTTTATTGTCAAATATGTCTTCTTTAGTGCAAACAGTTTCCATTCTTGTTAGTTCATTCAACTCTGACACTTTCTGCTCTGGATGGGGTTGTTCTTTGGGTGGTTCTGTAGGTATTGAATGAATTTACCCATGGATCAAGAGACAAGGTAAGCAAGACCGAGTTTAAAGAAGTTCTCTCTGATATTCTGCTAGGCATGGCTGCCGGGTTGAAGCGAGATCCTATTGTTATACTTCGGATCGATGGAGAAGACCTTCTTGAATTCATAAATAGCCCTGCTTACGAGCCTGAGATGATCTCCACTTTTTCACAAATCCACCTACCTGAAGGATCTCTTCGTGATTACATTGTTAAAGCTTTTGAAAATCTTACTGTGGAACAAGGGATGCCTCCTCCTTCAGACCCCTGGGTAATTAATGATTTGAATAGAACTAATAAGATCTAGCTGAACTGTGACTGGATCATTTCATGCTCTAGTAGTTTTGTGATTGAATTTGTTCCAACTTCTCGTTAGGTTGTGAGCGATATTGTCGAACCAGCTCTGGTATCCTGTGCTGCAGGTGAGAATTGGGACAAGCCTGTCTCGCAAGAGACCTTCTTGTTGGAATTCAAGAGAGCTGCAGAGCACGTCACTCAACGCCTAAAAGAACAGCCCGTTATTGTCGCTCACAGTGAAAACACCTTTGATGGAAGTAGCATAAGAAGACTGTTATCCAACAAATTCGAACTGGACAAGGTAATATCACATCATAGTACAACTGTTTCCCATTCGTCTTGTTTGATTAAGATTGTTCTTGAATTGGTGTTCTCCGCCCCTAGTAAGAAAGTAAGCTCCAATTGAGCAAAGTGCCAAAGTCCTCAATAGGAAAAGTCTCTCCATAATTCTCTCTTTGTTCTAGATTCTACTGTTGTATTCCTTCATTTGCCTTCAACACTTGGGGATCATCTACGGTTAGTTCATCTGTCATTATTTGATCTTGATGCAGTCACTTAATACCGCAATTCAGAGTGTCCCGAAAGATAAAACCGGAAAATTGGCAAAGGAACATCTGCAGTTGGCGCTGGATTTGGTTGCTCCATTAGCCGGTTTACCACCGCTCGGTGCCCTCGATGAGGTTACGAAAACAATCAAAACCATCAATGACATTAACATTAAGCTAATCATTAGCTTCACTGAAACTGATGTTTGGTTTGTAAAATCTAATCTGCAGATGGACAAGCTTCTTCTTGATGTATTCAAGATGGTAGACGCCGATGACGGGAAGGCGGTTAAAGAGGACGAGTTCAAGAAACTATTGACTGAGATTCTGGGGGCAGTCATGTTGCAGTTGGAAGGCAATCCAATCTCGGTTTCTTCTAATTCTGTTGTGCATGAGCCTCTAGCTTGTTCTTCTACACTTTTGACACCATCCAGTTAG

mRNA sequence

ATGGATTCTGCTTCTTCACCACCTTCATCATCATCTTCACCATTGAAACGACCTACTGGACAGGTTCTGGACGGTTCAGAAATTATGGAGTTGGTTGCCAACAACCAAGTCTTCTCCTCTTTCGTCGACCATAAGTTTCACGAGCTCGACACCGACAAAGACGGCAAACTTTCCCTCAAAGAACTTCACCCTGCCGTCGCCGACATTGGTGCCGCTCTTGGCCTTCCTCCTCAAGGCACTTCCCTTGATTCCGACAACATTTACTCTGAGGTATTGAATGAATTTACCCATGGATCAAGAGACAAGGTAAGCAAGACCGAGTTTAAAGAAGTTCTCTCTGATATTCTGCTAGGCATGGCTGCCGGGTTGAAGCGAGATCCTATTGTTATACTTCGGATCGATGGAGAAGACCTTCTTGAATTCATAAATAGCCCTGCTTACGAGCCTGAGATGATCTCCACTTTTTCACAAATCCACCTACCTGAAGGATCTCTTCGTGATTACATTGTTAAAGCTTTTGAAAATCTTACTGTGGAACAAGGGATGCCTCCTCCTTCAGACCCCTGGGTTGTGAGCGATATTGTCGAACCAGCTCTGGTATCCTGTGCTGCAGGTGAGAATTGGGACAAGCCTGTCTCGCAAGAGACCTTCTTGTTGGAATTCAAGAGAGCTGCAGAGCACGTCACTCAACGCCTAAAAGAACAGCCCGTTATTGTCGCTCACAGTGAAAACACCTTTGATGGAAGTAGCATAAGAAGACTGTTATCCAACAAATTCGAACTGGACAAGTCACTTAATACCGCAATTCAGAGTGTCCCGAAAGATAAAACCGGAAAATTGGCAAAGGAACATCTGCAGTTGGCGCTGGATTTGGTTGCTCCATTAGCCGGTTTACCACCGCTCGGTGCCCTCGATGAGATGGACAAGCTTCTTCTTGATGTATTCAAGATGGTAGACGCCGATGACGGGAAGGCGGTTAAAGAGGACGAGTTCAAGAAACTATTGACTGAGATTCTGGGGGCAGTCATGTTGCAGTTGGAAGGCAATCCAATCTCGGTTTCTTCTAATTCTGTTGTGCATGAGCCTCTAGCTTGTTCTTCTACACTTTTGACACCATCCAGTTAG

Coding sequence (CDS)

ATGGATTCTGCTTCTTCACCACCTTCATCATCATCTTCACCATTGAAACGACCTACTGGACAGGTTCTGGACGGTTCAGAAATTATGGAGTTGGTTGCCAACAACCAAGTCTTCTCCTCTTTCGTCGACCATAAGTTTCACGAGCTCGACACCGACAAAGACGGCAAACTTTCCCTCAAAGAACTTCACCCTGCCGTCGCCGACATTGGTGCCGCTCTTGGCCTTCCTCCTCAAGGCACTTCCCTTGATTCCGACAACATTTACTCTGAGGTATTGAATGAATTTACCCATGGATCAAGAGACAAGGTAAGCAAGACCGAGTTTAAAGAAGTTCTCTCTGATATTCTGCTAGGCATGGCTGCCGGGTTGAAGCGAGATCCTATTGTTATACTTCGGATCGATGGAGAAGACCTTCTTGAATTCATAAATAGCCCTGCTTACGAGCCTGAGATGATCTCCACTTTTTCACAAATCCACCTACCTGAAGGATCTCTTCGTGATTACATTGTTAAAGCTTTTGAAAATCTTACTGTGGAACAAGGGATGCCTCCTCCTTCAGACCCCTGGGTTGTGAGCGATATTGTCGAACCAGCTCTGGTATCCTGTGCTGCAGGTGAGAATTGGGACAAGCCTGTCTCGCAAGAGACCTTCTTGTTGGAATTCAAGAGAGCTGCAGAGCACGTCACTCAACGCCTAAAAGAACAGCCCGTTATTGTCGCTCACAGTGAAAACACCTTTGATGGAAGTAGCATAAGAAGACTGTTATCCAACAAATTCGAACTGGACAAGTCACTTAATACCGCAATTCAGAGTGTCCCGAAAGATAAAACCGGAAAATTGGCAAAGGAACATCTGCAGTTGGCGCTGGATTTGGTTGCTCCATTAGCCGGTTTACCACCGCTCGGTGCCCTCGATGAGATGGACAAGCTTCTTCTTGATGTATTCAAGATGGTAGACGCCGATGACGGGAAGGCGGTTAAAGAGGACGAGTTCAAGAAACTATTGACTGAGATTCTGGGGGCAGTCATGTTGCAGTTGGAAGGCAATCCAATCTCGGTTTCTTCTAATTCTGTTGTGCATGAGCCTCTAGCTTGTTCTTCTACACTTTTGACACCATCCAGTTAG

Protein sequence

MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQGMPPPSDPWVVSDIVEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVAHSENTFDGSSIRRLLSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPPLGALDEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVHEPLACSSTLLTPSS

Homology

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BLAST of Cla015854 vs. TrEMBL
Match: A0A0A0K5V6_CUCSA (EF-Hand containing protein OS=Cucumis sativus GN=Csa_7G009170 PE=4 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 1.1e-184
Identity = 333/374 (89.04%), Postives = 351/374 (93.85%), Query Frame = 1


Query: 1   MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLK 60
           MD   S PSSSS P      QVLDGSEIMELVANN +FSSFVDHKFH+LDTDKDGKLSL+
Sbjct: 1   MDPLPSSPSSSSKP------QVLDGSEIMELVANNHLFSSFVDHKFHDLDTDKDGKLSLQ 60

Query: 61  ELHPAVADIGAALGLPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMA 120
           ELHPAVADIGAALGLPPQGTSLDSDNIYS+VLNEFTHGSRDKVSKTEFKEVLSDILLGMA
Sbjct: 61  ELHPAVADIGAALGLPPQGTSLDSDNIYSQVLNEFTHGSRDKVSKTEFKEVLSDILLGMA 120

Query: 121 AGLKRDPIVILRIDGEDLLEFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQ 180
           AGLKRDPIVILR+DGEDLLEFINS AYEPEM++TFS+I+LPEGSL+DYIVKAFE+LTVEQ
Sbjct: 121 AGLKRDPIVILRMDGEDLLEFINSSAYEPEMVATFSEINLPEGSLQDYIVKAFEDLTVEQ 180

Query: 181 GMPPPSDPWVVSDIVEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVA 240
           GMPPPSD WV+SDI+EPAL SCAAGENWDKPVSQE FLL FKRAA H+ QRLKEQPVIVA
Sbjct: 181 GMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLLAFKRAAVHIAQRLKEQPVIVA 240

Query: 241 HSENTFDGSSIRRLLSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPP 300
           HSENTFDGSSIRRLLSNKFELDKSLN A+Q+VP+DKTGKL KEHLQLALDLVAPLAGLPP
Sbjct: 241 HSENTFDGSSIRRLLSNKFELDKSLNAALQTVPRDKTGKLPKEHLQLALDLVAPLAGLPP 300

Query: 301 LGALDEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVH 360
           LGALDEMDKLLLDVFKMVDADDGK VKE+EFKKLLTEILGAVMLQLEGNPISVSSNSVVH
Sbjct: 301 LGALDEMDKLLLDVFKMVDADDGKVVKEEEFKKLLTEILGAVMLQLEGNPISVSSNSVVH 360

Query: 361 EPLACSSTLLTPSS 375
           EPLACSSTLLTP S
Sbjct: 361 EPLACSSTLLTPPS 368

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BLAST of Cla015854 vs. TrEMBL
Match: W9QG68_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003233 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 1.1e-149
Identity = 273/380 (71.84%), Postives = 331/380 (87.11%), Query Frame = 1


Query: 1   MDSASSPPSSSSS----PLKRPTGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGK 60
           M++ SS  ++++S    P  + +GQVLDGS IMELV N +VFS+FV+HKFHELD D DGK
Sbjct: 1   METTSSSTTTTTSLPGTPKNKKSGQVLDGSNIMELVGNEEVFSNFVEHKFHELDKDCDGK 60

Query: 61  LSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDIL 120
           LS+ EL PAVADIGAALGLP QG+S DSD+IYSEVL+EFTHG+++KVSKTEFKEVLSDIL
Sbjct: 61  LSVNELQPAVADIGAALGLPAQGSSSDSDHIYSEVLSEFTHGNQEKVSKTEFKEVLSDIL 120

Query: 121 LGMAAGLKRDPIVILRIDGEDLLEFINSPAYEPEMISTFSQIHLPEG--SLRDYIVKAFE 180
           LGMAAGLKRDPIVILRIDGEDLLEFI+SP++EPEMIS FS+I   +   SLRD I+KA E
Sbjct: 121 LGMAAGLKRDPIVILRIDGEDLLEFISSPSFEPEMISIFSEIESADQGLSLRDSIIKALE 180

Query: 181 NLTVEQGMPPPSDPWVVSDIVEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKE 240
            L+VEQGMPP SD WV+S+ VEPAL+S    ++ +KPVSQETFL+EFK+AAE V Q LKE
Sbjct: 181 KLSVEQGMPPSSDSWVISNFVEPALLSGDGHDDREKPVSQETFLVEFKKAAESVAQHLKE 240

Query: 241 QPVIVAHSENTFDGSSIRRLLSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAP 300
           +PVIVAHSENTFDGS I+RLL+NKFE DK+LN A++++P+D+ GK++KEHL++ALDL+AP
Sbjct: 241 RPVIVAHSENTFDGSGIKRLLANKFEQDKTLNVALENLPRDRNGKMSKEHLRVALDLLAP 300

Query: 301 LAGLPPLGALDEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVS 360
            AGLPP+GA++EMDK++ DVFKMV+ADDGK VK+DEFKK+LTEILG++MLQLEGNPISVS
Sbjct: 301 SAGLPPIGAIEEMDKVVGDVFKMVNADDGKVVKDDEFKKILTEILGSIMLQLEGNPISVS 360

Query: 361 SNSVVHEPLACSSTLLTPSS 375
           SNSVVHEPLA SSTLL PSS
Sbjct: 361 SNSVVHEPLASSSTLLQPSS 380

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BLAST of Cla015854 vs. TrEMBL
Match: M0ZMY5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001638 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 7.2e-149
Identity = 260/360 (72.22%), Postives = 319/360 (88.61%), Query Frame = 1


Query: 15  LKRPTGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALG 74
           +K    QV+DGS+IM+LV N  VFS+FVDHKF ELD DKDGKLS+KEL PAVADIG ALG
Sbjct: 9   MKSSESQVMDGSDIMKLVGNEAVFSNFVDHKFQELDIDKDGKLSVKELQPAVADIGVALG 68

Query: 75  LPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMAAGLKRDPIVILRID 134
           LPPQG+S +SD+IYSEVL EFTHG ++KVSKTEFKEVLSDILLGMAAGLKRDPIV+LR+D
Sbjct: 69  LPPQGSSPESDHIYSEVLQEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVLLRMD 128

Query: 135 GEDLLEFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQGMPPPSDPWVVSDI 194
           GEDLLEF+ SPA+EPEM+S +S++ LP+GSL+DYI+KAFE LTV+QGMPP SD WV+S++
Sbjct: 129 GEDLLEFVKSPAFEPEMLSLYSELELPDGSLKDYIIKAFEKLTVDQGMPPASDSWVMSNV 188

Query: 195 VEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVAHSENTFDGSSIRRL 254
           VEP + SC    N D+PV+QETFL EFK+ AE   QRLKEQPVIVAHSENTFDGS I+RL
Sbjct: 189 VEPVVESCIGASN-DQPVTQETFLAEFKKVAESAAQRLKEQPVIVAHSENTFDGSGIKRL 248

Query: 255 LSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPPLGALDEMDKLLLDV 314
           LSNKFELDK+L++A++++P+D+ GK++KE+L++ALD++AP AGLPP+GA+D+MDK++ +V
Sbjct: 249 LSNKFELDKTLDSALKTIPRDRHGKMSKEYLRVALDVLAPSAGLPPIGAVDQMDKVIQEV 308

Query: 315 FKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVHEPLACSSTLLTPSS 374
            KM+DADDGK VKE+EFKKLLTEILG++MLQLEGNP+SVS+NSVVHEPLA SSTLL P S
Sbjct: 309 CKMLDADDGKMVKEEEFKKLLTEILGSMMLQLEGNPVSVSTNSVVHEPLASSSTLLQPPS 367

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BLAST of Cla015854 vs. TrEMBL
Match: B9HRC2_POPTR (Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0009s13060g PE=4 SV=2)

HSP 1 Score: 535.0 bits (1377), Expect = 7.2e-149
Identity = 269/372 (72.31%), Postives = 318/372 (85.48%), Query Frame = 1


Query: 5   SSPPSSSSSPLKRP--TGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLKEL 64
           SS  S+S+  +K     GQVLDGS+IMELV N +VFSSFVDHKF ELD D+DGKLSLKEL
Sbjct: 7   SSSGSTSTEKIKTSGGNGQVLDGSDIMELVGNEEVFSSFVDHKFQELDRDRDGKLSLKEL 66

Query: 65  HPAVADIGAALGLPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMAAG 124
            PAVADIGAALGLP QG+S DSD+IY+EVLNEFTHG +++VSKTEFKEVLSD LLGMA+G
Sbjct: 67  EPAVADIGAALGLPAQGSSPDSDHIYTEVLNEFTHGKQERVSKTEFKEVLSDFLLGMASG 126

Query: 125 LKRDPIVILRIDGEDLLEFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQGM 184
           LKRDPIVILRIDGEDLLEFIN P YE EM+  FSQ+  P+GSL D+IVK  E LTV+QGM
Sbjct: 127 LKRDPIVILRIDGEDLLEFINGPDYEAEMVLLFSQLESPDGSLHDHIVKVLEQLTVDQGM 186

Query: 185 PPPSDPWVVSDIVEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVAHS 244
           PP SD WV+S+IVEPAL SC  G++ DKP+SQETFL EF++ AE V Q LKEQPVIVAH 
Sbjct: 187 PPSSDSWVMSNIVEPALQSC-TGQDHDKPLSQETFLAEFRKVAESVAQHLKEQPVIVAHC 246

Query: 245 ENTFDGSSIRRLLSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPPLG 304
           ENTFDGS IRRLLSNKFELDK+LNTA ++ PKD+ GK++ E+L++ALD VAP AGLPP+G
Sbjct: 247 ENTFDGSGIRRLLSNKFELDKTLNTATENAPKDRNGKISNEYLRVALDAVAPSAGLPPIG 306

Query: 305 ALDEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVHEP 364
           A+ EMD+++ +VFKM++ADDGK VKEDEFKK+LTEI+G++MLQLE NP+S+SSNSVVHEP
Sbjct: 307 AIQEMDEVISEVFKMMNADDGKLVKEDEFKKMLTEIMGSIMLQLESNPVSISSNSVVHEP 366

Query: 365 LACSSTLLTPSS 375
           LA S+TLL PSS
Sbjct: 367 LASSTTLLQPSS 377

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BLAST of Cla015854 vs. TrEMBL
Match: B9T715_RICCO (Calcium ion binding protein, putative OS=Ricinus communis GN=RCOM_0358080 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.7e-148
Identity = 264/355 (74.37%), Postives = 312/355 (87.89%), Query Frame = 1


Query: 20  GQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQG 79
           GQVLDGS+IMELV N +VFSSFVDHKF ELD D DG LS+KEL PAVADIGAALGLP QG
Sbjct: 20  GQVLDGSDIMELVGNEEVFSSFVDHKFRELDRDSDGHLSVKELQPAVADIGAALGLPAQG 79

Query: 80  TSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLL 139
           +S DSD IYSEVLNEFTHG ++KV+KTEFKEVLSDILLGMAAGLKRDP+VILR++G+DLL
Sbjct: 80  SSPDSDYIYSEVLNEFTHGKQEKVNKTEFKEVLSDILLGMAAGLKRDPVVILRMEGDDLL 139

Query: 140 EFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQGMPPPSDPWVVSDIVEPAL 199
           EF+N P+YE EM+S FSQ+ LP+GSL D+I KA ENL V+QGMPP SD WV+S IVEPAL
Sbjct: 140 EFVNGPSYEAEMVSIFSQLQLPDGSLHDHIAKALENLRVDQGMPPSSDSWVMSTIVEPAL 199

Query: 200 VSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVAHSENTFDGSSIRRLLSNKF 259
            +C  G++ DKP+SQETFL EFK+ AE V Q LKEQPVIVAHSENTFDGS IRRLL+NKF
Sbjct: 200 QTC-TGQDHDKPISQETFLAEFKKVAERVAQNLKEQPVIVAHSENTFDGSGIRRLLANKF 259

Query: 260 ELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPPLGALDEMDKLLLDVFKMVD 319
           ELDK LNTAI++ PKD+ GK++KE L++ALD++AP AGLPP+GA+DE+DK++ ++F M++
Sbjct: 260 ELDKILNTAIENAPKDRNGKMSKEFLRVALDVIAPSAGLPPVGAVDEIDKVVGELFTMMN 319

Query: 320 ADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVHEPLACSSTLLTPSS 375
           ADDGK VKEDEFKK+LTEILG++MLQLEGNPI VS+NSVVHEPLA SSTLL P+S
Sbjct: 320 ADDGKPVKEDEFKKMLTEILGSIMLQLEGNPIPVSTNSVVHEPLASSSTLLQPTS 373

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BLAST of Cla015854 vs. NCBI nr
Match: gi|659094312|ref|XP_008447993.1| (PREDICTED: uncharacterized protein LOC103490312 isoform X1 [Cucumis melo])

HSP 1 Score: 661.4 bits (1705), Expect = 9.5e-187
Identity = 339/374 (90.64%), Postives = 352/374 (94.12%), Query Frame = 1


Query: 1   MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLK 60
           MD  SS PSSSS P      QVLDGSEIMELVANN +FSSFVDHKF +LDTDKDGKLSL+
Sbjct: 1   MDPLSSSPSSSSKP------QVLDGSEIMELVANNHLFSSFVDHKFQDLDTDKDGKLSLQ 60

Query: 61  ELHPAVADIGAALGLPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMA 120
           ELHPAVADIGAALGLPPQGTSLDSDNIYS+VLNEFTHGSRDKVSKTEFKEVLSDILLGMA
Sbjct: 61  ELHPAVADIGAALGLPPQGTSLDSDNIYSQVLNEFTHGSRDKVSKTEFKEVLSDILLGMA 120

Query: 121 AGLKRDPIVILRIDGEDLLEFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQ 180
           AGLKRDPIVILR+DGEDLLEFINS AYEPEMI+TFS+I+LPEGSL DYIVKAFENLTVEQ
Sbjct: 121 AGLKRDPIVILRMDGEDLLEFINSSAYEPEMIATFSEINLPEGSLHDYIVKAFENLTVEQ 180

Query: 181 GMPPPSDPWVVSDIVEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVA 240
           GMPPPSD WV+SDI+EPAL SCAAGENWDKPVSQE FL EFKRAAEHV QRLKEQPVIVA
Sbjct: 181 GMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLFEFKRAAEHVAQRLKEQPVIVA 240

Query: 241 HSENTFDGSSIRRLLSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPP 300
           HSENTFDGSSIRRLLSNKFELDKSLNTA+QSVP+DKTGKL KEHLQLALDLVAPLAGLPP
Sbjct: 241 HSENTFDGSSIRRLLSNKFELDKSLNTALQSVPRDKTGKLPKEHLQLALDLVAPLAGLPP 300

Query: 301 LGALDEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVH 360
           LGALDEMDKLLLDVFKMVDADDGK VKEDEFKKLLTEILGAVMLQLEG+PISVSSNSVVH
Sbjct: 301 LGALDEMDKLLLDVFKMVDADDGKVVKEDEFKKLLTEILGAVMLQLEGSPISVSSNSVVH 360

Query: 361 EPLACSSTLLTPSS 375
           EPLACSSTLLTP S
Sbjct: 361 EPLACSSTLLTPPS 368

[Close]

BLAST of Cla015854 vs. NCBI nr
Match: gi|449454341|ref|XP_004144914.1| (PREDICTED: uncharacterized protein LOC101204305 isoform X1 [Cucumis sativus])

HSP 1 Score: 654.1 bits (1686), Expect = 1.5e-184
Identity = 333/374 (89.04%), Postives = 351/374 (93.85%), Query Frame = 1


Query: 1   MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLK 60
           MD   S PSSSS P      QVLDGSEIMELVANN +FSSFVDHKFH+LDTDKDGKLSL+
Sbjct: 1   MDPLPSSPSSSSKP------QVLDGSEIMELVANNHLFSSFVDHKFHDLDTDKDGKLSLQ 60

Query: 61  ELHPAVADIGAALGLPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMA 120
           ELHPAVADIGAALGLPPQGTSLDSDNIYS+VLNEFTHGSRDKVSKTEFKEVLSDILLGMA
Sbjct: 61  ELHPAVADIGAALGLPPQGTSLDSDNIYSQVLNEFTHGSRDKVSKTEFKEVLSDILLGMA 120

Query: 121 AGLKRDPIVILRIDGEDLLEFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQ 180
           AGLKRDPIVILR+DGEDLLEFINS AYEPEM++TFS+I+LPEGSL+DYIVKAFE+LTVEQ
Sbjct: 121 AGLKRDPIVILRMDGEDLLEFINSSAYEPEMVATFSEINLPEGSLQDYIVKAFEDLTVEQ 180

Query: 181 GMPPPSDPWVVSDIVEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVA 240
           GMPPPSD WV+SDI+EPAL SCAAGENWDKPVSQE FLL FKRAA H+ QRLKEQPVIVA
Sbjct: 181 GMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLLAFKRAAVHIAQRLKEQPVIVA 240

Query: 241 HSENTFDGSSIRRLLSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPP 300
           HSENTFDGSSIRRLLSNKFELDKSLN A+Q+VP+DKTGKL KEHLQLALDLVAPLAGLPP
Sbjct: 241 HSENTFDGSSIRRLLSNKFELDKSLNAALQTVPRDKTGKLPKEHLQLALDLVAPLAGLPP 300

Query: 301 LGALDEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVH 360
           LGALDEMDKLLLDVFKMVDADDGK VKE+EFKKLLTEILGAVMLQLEGNPISVSSNSVVH
Sbjct: 301 LGALDEMDKLLLDVFKMVDADDGKVVKEEEFKKLLTEILGAVMLQLEGNPISVSSNSVVH 360

Query: 361 EPLACSSTLLTPSS 375
           EPLACSSTLLTP S
Sbjct: 361 EPLACSSTLLTPPS 368

[Close]

BLAST of Cla015854 vs. NCBI nr
Match: gi|703070055|ref|XP_010088681.1| (hypothetical protein L484_003233 [Morus notabilis])

HSP 1 Score: 537.7 bits (1384), Expect = 1.6e-149
Identity = 273/380 (71.84%), Postives = 331/380 (87.11%), Query Frame = 1


Query: 1   MDSASSPPSSSSS----PLKRPTGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGK 60
           M++ SS  ++++S    P  + +GQVLDGS IMELV N +VFS+FV+HKFHELD D DGK
Sbjct: 1   METTSSSTTTTTSLPGTPKNKKSGQVLDGSNIMELVGNEEVFSNFVEHKFHELDKDCDGK 60

Query: 61  LSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDIL 120
           LS+ EL PAVADIGAALGLP QG+S DSD+IYSEVL+EFTHG+++KVSKTEFKEVLSDIL
Sbjct: 61  LSVNELQPAVADIGAALGLPAQGSSSDSDHIYSEVLSEFTHGNQEKVSKTEFKEVLSDIL 120

Query: 121 LGMAAGLKRDPIVILRIDGEDLLEFINSPAYEPEMISTFSQIHLPEG--SLRDYIVKAFE 180
           LGMAAGLKRDPIVILRIDGEDLLEFI+SP++EPEMIS FS+I   +   SLRD I+KA E
Sbjct: 121 LGMAAGLKRDPIVILRIDGEDLLEFISSPSFEPEMISIFSEIESADQGLSLRDSIIKALE 180

Query: 181 NLTVEQGMPPPSDPWVVSDIVEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKE 240
            L+VEQGMPP SD WV+S+ VEPAL+S    ++ +KPVSQETFL+EFK+AAE V Q LKE
Sbjct: 181 KLSVEQGMPPSSDSWVISNFVEPALLSGDGHDDREKPVSQETFLVEFKKAAESVAQHLKE 240

Query: 241 QPVIVAHSENTFDGSSIRRLLSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAP 300
           +PVIVAHSENTFDGS I+RLL+NKFE DK+LN A++++P+D+ GK++KEHL++ALDL+AP
Sbjct: 241 RPVIVAHSENTFDGSGIKRLLANKFEQDKTLNVALENLPRDRNGKMSKEHLRVALDLLAP 300

Query: 301 LAGLPPLGALDEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVS 360
            AGLPP+GA++EMDK++ DVFKMV+ADDGK VK+DEFKK+LTEILG++MLQLEGNPISVS
Sbjct: 301 SAGLPPIGAIEEMDKVVGDVFKMVNADDGKVVKDDEFKKILTEILGSIMLQLEGNPISVS 360

Query: 361 SNSVVHEPLACSSTLLTPSS 375
           SNSVVHEPLA SSTLL PSS
Sbjct: 361 SNSVVHEPLASSSTLLQPSS 380

[Close]

BLAST of Cla015854 vs. NCBI nr
Match: gi|566187736|ref|XP_002313744.2| (calcium-binding EF hand family protein [Populus trichocarpa])

HSP 1 Score: 535.0 bits (1377), Expect = 1.0e-148
Identity = 269/372 (72.31%), Postives = 318/372 (85.48%), Query Frame = 1


Query: 5   SSPPSSSSSPLKRP--TGQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLKEL 64
           SS  S+S+  +K     GQVLDGS+IMELV N +VFSSFVDHKF ELD D+DGKLSLKEL
Sbjct: 7   SSSGSTSTEKIKTSGGNGQVLDGSDIMELVGNEEVFSSFVDHKFQELDRDRDGKLSLKEL 66

Query: 65  HPAVADIGAALGLPPQGTSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMAAG 124
            PAVADIGAALGLP QG+S DSD+IY+EVLNEFTHG +++VSKTEFKEVLSD LLGMA+G
Sbjct: 67  EPAVADIGAALGLPAQGSSPDSDHIYTEVLNEFTHGKQERVSKTEFKEVLSDFLLGMASG 126

Query: 125 LKRDPIVILRIDGEDLLEFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQGM 184
           LKRDPIVILRIDGEDLLEFIN P YE EM+  FSQ+  P+GSL D+IVK  E LTV+QGM
Sbjct: 127 LKRDPIVILRIDGEDLLEFINGPDYEAEMVLLFSQLESPDGSLHDHIVKVLEQLTVDQGM 186

Query: 185 PPPSDPWVVSDIVEPALVSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVAHS 244
           PP SD WV+S+IVEPAL SC  G++ DKP+SQETFL EF++ AE V Q LKEQPVIVAH 
Sbjct: 187 PPSSDSWVMSNIVEPALQSC-TGQDHDKPLSQETFLAEFRKVAESVAQHLKEQPVIVAHC 246

Query: 245 ENTFDGSSIRRLLSNKFELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPPLG 304
           ENTFDGS IRRLLSNKFELDK+LNTA ++ PKD+ GK++ E+L++ALD VAP AGLPP+G
Sbjct: 247 ENTFDGSGIRRLLSNKFELDKTLNTATENAPKDRNGKISNEYLRVALDAVAPSAGLPPIG 306

Query: 305 ALDEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVHEP 364
           A+ EMD+++ +VFKM++ADDGK VKEDEFKK+LTEI+G++MLQLE NP+S+SSNSVVHEP
Sbjct: 307 AIQEMDEVISEVFKMMNADDGKLVKEDEFKKMLTEIMGSIMLQLESNPVSISSNSVVHEP 366

Query: 365 LACSSTLLTPSS 375
           LA S+TLL PSS
Sbjct: 367 LASSTTLLQPSS 377

[Close]

BLAST of Cla015854 vs. NCBI nr
Match: gi|255586847|ref|XP_002534034.1| (PREDICTED: uncharacterized protein LOC8258929 [Ricinus communis])

HSP 1 Score: 533.1 bits (1372), Expect = 3.9e-148
Identity = 264/355 (74.37%), Postives = 312/355 (87.89%), Query Frame = 1


Query: 20  GQVLDGSEIMELVANNQVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQG 79
           GQVLDGS+IMELV N +VFSSFVDHKF ELD D DG LS+KEL PAVADIGAALGLP QG
Sbjct: 20  GQVLDGSDIMELVGNEEVFSSFVDHKFRELDRDSDGHLSVKELQPAVADIGAALGLPAQG 79

Query: 80  TSLDSDNIYSEVLNEFTHGSRDKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLL 139
           +S DSD IYSEVLNEFTHG ++KV+KTEFKEVLSDILLGMAAGLKRDP+VILR++G+DLL
Sbjct: 80  SSPDSDYIYSEVLNEFTHGKQEKVNKTEFKEVLSDILLGMAAGLKRDPVVILRMEGDDLL 139

Query: 140 EFINSPAYEPEMISTFSQIHLPEGSLRDYIVKAFENLTVEQGMPPPSDPWVVSDIVEPAL 199
           EF+N P+YE EM+S FSQ+ LP+GSL D+I KA ENL V+QGMPP SD WV+S IVEPAL
Sbjct: 140 EFVNGPSYEAEMVSIFSQLQLPDGSLHDHIAKALENLRVDQGMPPSSDSWVMSTIVEPAL 199

Query: 200 VSCAAGENWDKPVSQETFLLEFKRAAEHVTQRLKEQPVIVAHSENTFDGSSIRRLLSNKF 259
            +C  G++ DKP+SQETFL EFK+ AE V Q LKEQPVIVAHSENTFDGS IRRLL+NKF
Sbjct: 200 QTC-TGQDHDKPISQETFLAEFKKVAERVAQNLKEQPVIVAHSENTFDGSGIRRLLANKF 259

Query: 260 ELDKSLNTAIQSVPKDKTGKLAKEHLQLALDLVAPLAGLPPLGALDEMDKLLLDVFKMVD 319
           ELDK LNTAI++ PKD+ GK++KE L++ALD++AP AGLPP+GA+DE+DK++ ++F M++
Sbjct: 260 ELDKILNTAIENAPKDRNGKMSKEFLRVALDVIAPSAGLPPVGAVDEIDKVVGELFTMMN 319

Query: 320 ADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSVVHEPLACSSTLLTPSS 375
           ADDGK VKEDEFKK+LTEILG++MLQLEGNPI VS+NSVVHEPLA SSTLL P+S
Sbjct: 320 ADDGKPVKEDEFKKMLTEILGSIMLQLEGNPIPVSTNSVVHEPLASSSTLLQPTS 373

The following BLAST results are available for this feature:

BLAST of Cla015854 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5V6_CUCSA	1.1e-184	89.04	EF-Hand containing protein OS=Cucumis sativus GN=Csa_7G009170 PE=4 SV=1	[more]
W9QG68_9ROSA	1.1e-149	71.84	Uncharacterized protein OS=Morus notabilis GN=L484_003233 PE=4 SV=1	[more]
M0ZMY5_SOLTU	7.2e-149	72.22	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001638 PE=4 SV=1	[more]
B9HRC2_POPTR	7.2e-149	72.31	Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0009s1306...	[more]
B9T715_RICCO	2.7e-148	74.37	Calcium ion binding protein, putative OS=Ricinus communis GN=RCOM_0358080 PE=4 S...	[more]

BLAST of Cla015854 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094312\|ref\|XP_008447993.1\|	9.5e-187	90.64	PREDICTED: uncharacterized protein LOC103490312 isoform X1 [Cucumis melo]	[more]
gi\|449454341\|ref\|XP_004144914.1\|	1.5e-184	89.04	PREDICTED: uncharacterized protein LOC101204305 isoform X1 [Cucumis sativus]	[more]
gi\|703070055\|ref\|XP_010088681.1\|	1.6e-149	71.84	hypothetical protein L484_003233 [Morus notabilis]	[more]
gi\|566187736\|ref\|XP_002313744.2\|	1.0e-148	72.31	calcium-binding EF hand family protein [Populus trichocarpa]	[more]
gi\|255586847\|ref\|XP_002534034.1\|	3.9e-148	74.37	PREDICTED: uncharacterized protein LOC8258929 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla015854	Cla015854	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla015854	Cla015854.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla015854.1.cds5	Cla015854.1.cds5	CDS
Cla015854.1.cds4	Cla015854.1.cds4	CDS
Cla015854.1.cds3	Cla015854.1.cds3	CDS
Cla015854.1.cds2	Cla015854.1.cds2	CDS
Cla015854.1.cds1	Cla015854.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 310..338 score: 4.2coord: 41..69 score:
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 102..118 score: 5.224coord: 306..341 score: 8.432coord: 37..72 score: 10.999coord: 260..295 score: 6
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 39..114 score: 1.4E-5coord: 308..336 score: 2.
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 259..348 score: 1.29E-13coord: 45..128 score: 1.29
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 50..62 scor
None	No IPR available	PANTHER	PTHR34574	FAMILY NOT NAMED	coord: 4..374 score: 9.0E
None	No IPR available	PANTHER	PTHR34574:SF2	EF-HAND CONTAINING PROTEIN-LIKE	coord: 4..374 score: 9.0E