Cla013486.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013486
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Glucan endo-1 3-beta-glucosidase 4 (AHRD V1 -- B6T2U4_MAIZE); contains Interpro domain(s) IPR012946 X8
Location	Chr2 : 28866880 .. 28867935 (-)
Sequence length	564

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGGAGGTTCATTTGTAGCACTCTAATTCTATTCCTATTCATTCACTGTTTCAGCCCAGGTGAGAACTAAAGGCTTCTCTTCTCTTATACCTTCTTCATATCTTCTAATACGGGTATCTTCTTGTTTCTTCTGTTTCAAATCAAACAAGAAGTTCTTTTCATGTTTTCTTTAATCCATGAACTAATCCAATAAAACCCAGATGTTTGTTTGTTTGTTACTGTGGGAGTATTTGTTTTCGTTCTAAATAAAGCTATCAAAGTAGTTGTTATTATTCTGTCTTATTCTTGGGTAACTTCTTTTATGGTTTTACATGTCGTGGAGTTCGGAATTTTGAATGCTTTTGCATTCTTCTTTATCGAAATCAGAATCTTTCACTTTTGACTAATTGTTCAATTTCTTCAACATTTCAATGATGCGTAGCCAGAAAGCAAGTATATCACACACATTACAAGAAAAACAAAACAAAGAATTTCAATTCATCCACTAAGAAAACTAAAATCAGTTTGTTGTTTTTGTATGTACCTTGTCTTTTCCCCGAATTTGAAATCAGGTTCATCAAGAGCAGATCCTTCACAAAAACAGGGGCAGCAATTCAGAGCAGCATCCCGAAAATCTTCGACTCATCAAAAGGACATCACGACTCCAATAACGACAGTCCCAACAATCAACATCCCAACCATTCCCATCATAAACCCTACGAGTTCGAACCCCGACACCGTCTCCCCAACCATGACGACCCCAAGCTTTACACCGGCAACCACCGCGAGCGGTGGCTCCAGCTGGTGCATTGCGAGTCTAAGCGCGTCGCAGGCGGCGCTGCAATTAGCTCTGGACTACGCGTGCGGCATGGGCGGTGCCGATTGCTCGTCGATTCAAGCCGGCGGAAACTGCTACAACCCTAATTCGGTTCGAGACCATGCTTCTTACGCGTTCAATAGCTATTACCAGAAGAATCCGCTTCCGAATAGCTGTAATTTTGGAGGCACTGCCGTGATCACCAGCACCAATCCCAGTAAGTTTCTCTTCTTGCTTTATCTAATTAGGGTTTAG

mRNA sequence

ATGGATGGGAGGTTCATTTGTAGCACTCTAATTCTATTCCTATTCATTCACTGTTTCAGCCCAGGTTCATCAAGAGCAGATCCTTCACAAAAACAGGGGCAGCAATTCAGAGCAGCATCCCGAAAATCTTCGACTCATCAAAAGGACATCACGACTCCAATAACGACAGTCCCAACAATCAACATCCCAACCATTCCCATCATAAACCCTACGAGTTCGAACCCCGACACCGTCTCCCCAACCATGACGACCCCAAGCTTTACACCGGCAACCACCGCGAGCGGTGGCTCCAGCTGGTGCATTGCGAGTCTAAGCGCGTCGCAGGCGGCGCTGCAATTAGCTCTGGACTACGCGTGCGGCATGGGCGGTGCCGATTGCTCGTCGATTCAAGCCGGCGGAAACTGCTACAACCCTAATTCGGTTCGAGACCATGCTTCTTACGCGTTCAATAGCTATTACCAGAAGAATCCGCTTCCGAATAGCTGTAATTTTGGAGGCACTGCCGTGATCACCAGCACCAATCCCAGTAAGTTTCTCTTCTTGCTTTATCTAATTAGGGTTTAG

Coding sequence (CDS)

ATGGATGGGAGGTTCATTTGTAGCACTCTAATTCTATTCCTATTCATTCACTGTTTCAGCCCAGGTTCATCAAGAGCAGATCCTTCACAAAAACAGGGGCAGCAATTCAGAGCAGCATCCCGAAAATCTTCGACTCATCAAAAGGACATCACGACTCCAATAACGACAGTCCCAACAATCAACATCCCAACCATTCCCATCATAAACCCTACGAGTTCGAACCCCGACACCGTCTCCCCAACCATGACGACCCCAAGCTTTACACCGGCAACCACCGCGAGCGGTGGCTCCAGCTGGTGCATTGCGAGTCTAAGCGCGTCGCAGGCGGCGCTGCAATTAGCTCTGGACTACGCGTGCGGCATGGGCGGTGCCGATTGCTCGTCGATTCAAGCCGGCGGAAACTGCTACAACCCTAATTCGGTTCGAGACCATGCTTCTTACGCGTTCAATAGCTATTACCAGAAGAATCCGCTTCCGAATAGCTGTAATTTTGGAGGCACTGCCGTGATCACCAGCACCAATCCCAGTAAGTTTCTCTTCTTGCTTTATCTAATTAGGGTTTAG

Protein sequence

MDGRFICSTLILFLFIHCFSPGSSRADPSQKQGQQFRAASRKSSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATTASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPSKFLFLLYLIRV

Homology

[Close]

BLAST of Cla013486 vs. Swiss-Prot
Match: ALL10_OLEEU (Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-21
Identity = 52/119 (43.70%), Postives = 63/119 (52.94%), Query Frame = 1


Query: 59  TINIPTIPIINPTSSNPDTVSPTMTTPSFTPATTASGGSSWCIASLSASQAALQLALDYA 118
           T  +P  P+  PT S P + SP    P+        G   WC+    A+ A LQ  +DY 
Sbjct: 4   TAGVPDQPVPTPTPSVPTSSSPVPKPPT-------QGNKKWCVPKAEATDAQLQSNIDYV 63

Query: 119 CGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQ-KNPLPNSCNFGGTAVITSTNPS 177
           C   G DC  IQA G C+NPN+VR HASYA NS+YQ K      C+F GT  ITS++PS
Sbjct: 64  CSQSGMDCGPIQANGACFNPNTVRAHASYAMNSWYQSKGRNDFDCDFSGTGAITSSDPS 115

[Close]

BLAST of Cla013486 vs. Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.5e-18
Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = 1


Query: 77  TVSPTMT---TPSFTPATTASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGG 136
           +V+PT +   +P+ +P    SGG  WC+A   A+   LQ  ++YACG    DC  IQ+GG
Sbjct: 352 SVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYACGF--VDCKPIQSGG 411

Query: 137 NCYNPNSVRDHASYAFNSYYQKNPLPN-SCNFGGTAVITSTNPS 177
            C++PNS++ HASY  N+YYQ N   + +C+F GT ++TS++PS
Sbjct: 412 ACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPS 453

[Close]

BLAST of Cla013486 vs. Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.2e-18
Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 1


Query: 71  TSSNPDTVSPTMTTPSFTPATTAS-----------------GGSSWCIASLSASQAALQL 130
           T  N   VSPT +T   +P+ ++S                 G   WCIAS  AS   LQ 
Sbjct: 346 TGENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQT 405

Query: 131 ALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPN-SCNFGGTAVITS 177
           ALD+ACG G  DCS++Q    C+ P++V  HASYAFN+YYQ++   +  C+F G +V   
Sbjct: 406 ALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVD 465

[Close]

BLAST of Cla013486 vs. Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 1


Query: 98  SWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQK-N 157
           ++CIA        LQ ALD+ACG G ++CS IQ G +CY PN+V+ HAS+AFNSYYQK  
Sbjct: 380 TYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEG 439

Query: 158 PLPNSCNFGGTAVITSTNPS 177
               SC+F G A+IT+T+PS
Sbjct: 440 RASGSCDFKGVAMITTTDPS 459

[Close]

BLAST of Cla013486 vs. Swiss-Prot
Match: PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 97  SSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQ-K 156
           +SWC+     S + LQ  LDYACG  GADC+     G+C+NP++VR H +YA NS++Q K
Sbjct: 19  ASWCVCKTGLSDSVLQKTLDYACG-NGADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKK 78

Query: 157 NPLPNSCNFGGTAVITSTNPS 177
                SCNF GTA +T+T+PS
Sbjct: 79  GQASESCNFTGTATLTTTDPS 98

[Close]

BLAST of Cla013486 vs. TrEMBL
Match: A0A0A0KDA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139780 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 4.9e-90
Identity = 163/176 (92.61%), Postives = 168/176 (95.45%), Query Frame = 1


Query: 1   MDGRFICSTLILFLFIHCFSPGSSRADPSQKQGQQFRAASRKSSTHQKDITTPITTVPTI 60
           MDGRF+CSTLILFLFIH F PGSSRADP+QKQG+QFRAASRKSST QKDITTPITTVPTI
Sbjct: 1   MDGRFLCSTLILFLFIHWFCPGSSRADPTQKQGKQFRAASRKSSTTQKDITTPITTVPTI 60

Query: 61  NIPTIPIINPTSSNPDTVSPTMTTPSFTPATTASGGSSWCIASLSASQAALQLALDYACG 120
           NIPTIPIINP SSNPDTVSP MTTPSFTP+TT SGGSSWCIAS SASQAALQLALDYACG
Sbjct: 61  NIPTIPIINPASSNPDTVSPAMTTPSFTPSTTISGGSSWCIASQSASQAALQLALDYACG 120

Query: 121 MGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS 177
           +GGADCSSIQ GGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS
Sbjct: 121 IGGADCSSIQGGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS 176

[Close]

BLAST of Cla013486 vs. TrEMBL
Match: W9RHU1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021388 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.5e-49
Identity = 100/142 (70.42%), Postives = 119/142 (83.80%), Query Frame = 1


Query: 42  KSSTHQKDITTPITTVPTI--NIPT--IPIINPTSSNPDTVSPTMTTPSFTPATT---AS 101
           ++ST Q+DITTPITTVPTI  N PT   PI+NP +SNPD+ SP  TTP+ TP+ T   AS
Sbjct: 52  QTSTTQRDITTPITTVPTITPNNPTSSTPIMNP-NSNPDSTSPVTTTPTLTPSITTSPAS 111

Query: 102 GGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQ 161
            G+SWC++S  ASQ ALQ+ALDYACG GG DCS+IQ GG+CYNPN+++DHAS+AFNSYYQ
Sbjct: 112 TGASWCVSSQGASQIALQVALDYACGYGGTDCSAIQPGGSCYNPNTIQDHASFAFNSYYQ 171

Query: 162 KNPLPNSCNFGGTAVITSTNPS 177
           KNP+PNSCNFGGTAVITSTNPS
Sbjct: 172 KNPVPNSCNFGGTAVITSTNPS 192

[Close]

BLAST of Cla013486 vs. TrEMBL
Match: A0A0B2PWP6_GLYSO (Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Glycine soja GN=glysoja_019935 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.4e-49
Identity = 109/184 (59.24%), Postives = 123/184 (66.85%), Query Frame = 1


Query: 10  LILFLFIHCFSPGSSRADPS---------QKQGQQFRAASRKSSTHQKDITTPITTVPTI 69
           +I  L  H    GSSR               QG+Q   AS   ST Q+DITTPITT+P +
Sbjct: 9   VIFLLMCHFLCSGSSRTQKEVPGHVNVLGHDQGKQEFTAS--ISTVQRDITTPITTIPNL 68

Query: 70  -----NIPTIPIINPTSSNPDTVSPTMTTPSFTPATT---ASGGSSWCIASLSASQAALQ 129
                 I T P +NP +SNPDTVSP  T P  TP T     S G+SWCIAS +ASQ  LQ
Sbjct: 69  VPTTPTISTSPFLNP-NSNPDTVSPASTIPFTTPTTVNSPISSGASWCIASPTASQTTLQ 128

Query: 130 LALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITS 177
           +ALDYACG  GADCS+IQ GG+CYNPNS+RDHASYAFN YYQKNP+PNSCNFGGTAVI S
Sbjct: 129 IALDYACGYDGADCSAIQPGGSCYNPNSIRDHASYAFNKYYQKNPVPNSCNFGGTAVIIS 188

[Close]

BLAST of Cla013486 vs. TrEMBL
Match: K7M4M3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G028400 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.4e-49
Identity = 109/184 (59.24%), Postives = 123/184 (66.85%), Query Frame = 1


Query: 10  LILFLFIHCFSPGSSRADPS---------QKQGQQFRAASRKSSTHQKDITTPITTVPTI 69
           +I  L  H    GSSR               QG+Q   AS   ST Q+DITTPITT+P +
Sbjct: 9   VIFLLMCHFLCSGSSRTQKEVPGHVNVLGHDQGKQEFTAS--ISTVQRDITTPITTIPNL 68

Query: 70  -----NIPTIPIINPTSSNPDTVSPTMTTPSFTPATT---ASGGSSWCIASLSASQAALQ 129
                 I T P +NP +SNPDTVSP  T P  TP T     S G+SWCIAS +ASQ  LQ
Sbjct: 69  VPTTPTISTSPFLNP-NSNPDTVSPASTIPFTTPTTVNSPISSGASWCIASPTASQTTLQ 128

Query: 130 LALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITS 177
           +ALDYACG  GADCS+IQ GG+CYNPNS+RDHASYAFN YYQKNP+PNSCNFGGTAVI S
Sbjct: 129 IALDYACGYDGADCSAIQPGGSCYNPNSIRDHASYAFNKYYQKNPVPNSCNFGGTAVIIS 188

[Close]

BLAST of Cla013486 vs. TrEMBL
Match: B9GT34_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s06050g PE=4 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 2.7e-48
Identity = 115/192 (59.90%), Postives = 134/192 (69.79%), Query Frame = 1


Query: 1   MDGRFICSTLILFLFIHCFSPGSS----RADPSQKQG----QQFRAASRKSSTHQKDITT 60
           M GR I S L+ FL     S GSS     AD + +Q     +Q    +   S+ +KDITT
Sbjct: 1   MGGRVIYS-LMFFLLGLFLSSGSSVAEMLADENSRQADHGTKQVVVDASSISSTRKDITT 60

Query: 61  PITTVPTINIPTIP-----IINPTSSNPDTVSPTMTTPSFTPATTASG---GSSWCIASL 120
           PITTVPTI IPT P     +INP +S PD+ SP   TP  TP +TAS    G+SWCIAS 
Sbjct: 61  PITTVPTI-IPTTPTASTPVINP-NSEPDSTSPATMTPMVTPTSTASPVSPGASWCIASQ 120

Query: 121 SASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNF 177
           SAS  ALQ+ALDYACG GGADCS+IQ  G+CYNPN++RDHASYAFNSYYQKNP+P+SCNF
Sbjct: 121 SASPTALQVALDYACGYGGADCSAIQPSGSCYNPNTLRDHASYAFNSYYQKNPVPSSCNF 180

[Close]

BLAST of Cla013486 vs. NCBI nr
Match: gi|659112882|ref|XP_008456350.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 1 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 4.9e-91
Identity = 166/176 (94.32%), Postives = 169/176 (96.02%), Query Frame = 1


Query: 1   MDGRFICSTLILFLFIHCFSPGSSRADPSQKQGQQFRAASRKSSTHQKDITTPITTVPTI 60
           MDGRFI STLILFLFIHCFSPGSSRADP QKQG+QFRAA RKSST QKDITTPITTVPTI
Sbjct: 1   MDGRFIYSTLILFLFIHCFSPGSSRADPPQKQGKQFRAALRKSSTSQKDITTPITTVPTI 60

Query: 61  NIPTIPIINPTSSNPDTVSPTMTTPSFTPATTASGGSSWCIASLSASQAALQLALDYACG 120
           NIPTIPIINPTSSNPDTVSP MTTPSFTPATT +GGSSWCIAS SASQAALQLALDYACG
Sbjct: 61  NIPTIPIINPTSSNPDTVSPAMTTPSFTPATTITGGSSWCIASQSASQAALQLALDYACG 120

Query: 121 MGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS 177
           MGGADCSSIQAGGNCYNPNSVRDHASYAFN+YYQKNPLPNSCNFGGTAVITSTNPS
Sbjct: 121 MGGADCSSIQAGGNCYNPNSVRDHASYAFNNYYQKNPLPNSCNFGGTAVITSTNPS 176

[Close]

BLAST of Cla013486 vs. NCBI nr
Match: gi|778713155|ref|XP_011656991.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 7.1e-90
Identity = 163/176 (92.61%), Postives = 168/176 (95.45%), Query Frame = 1


Query: 1   MDGRFICSTLILFLFIHCFSPGSSRADPSQKQGQQFRAASRKSSTHQKDITTPITTVPTI 60
           MDGRF+CSTLILFLFIH F PGSSRADP+QKQG+QFRAASRKSST QKDITTPITTVPTI
Sbjct: 1   MDGRFLCSTLILFLFIHWFCPGSSRADPTQKQGKQFRAASRKSSTTQKDITTPITTVPTI 60

Query: 61  NIPTIPIINPTSSNPDTVSPTMTTPSFTPATTASGGSSWCIASLSASQAALQLALDYACG 120
           NIPTIPIINP SSNPDTVSP MTTPSFTP+TT SGGSSWCIAS SASQAALQLALDYACG
Sbjct: 61  NIPTIPIINPASSNPDTVSPAMTTPSFTPSTTISGGSSWCIASQSASQAALQLALDYACG 120

Query: 121 MGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS 177
           +GGADCSSIQ GGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS
Sbjct: 121 IGGADCSSIQGGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS 176

[Close]

BLAST of Cla013486 vs. NCBI nr
Match: gi|778713159|ref|XP_011656992.1| (PREDICTED: major pollen allergen Ole e 10 isoform X2 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 7.1e-90
Identity = 163/176 (92.61%), Postives = 168/176 (95.45%), Query Frame = 1


Query: 1   MDGRFICSTLILFLFIHCFSPGSSRADPSQKQGQQFRAASRKSSTHQKDITTPITTVPTI 60
           MDGRF+CSTLILFLFIH F PGSSRADP+QKQG+QFRAASRKSST QKDITTPITTVPTI
Sbjct: 1   MDGRFLCSTLILFLFIHWFCPGSSRADPTQKQGKQFRAASRKSSTTQKDITTPITTVPTI 60

Query: 61  NIPTIPIINPTSSNPDTVSPTMTTPSFTPATTASGGSSWCIASLSASQAALQLALDYACG 120
           NIPTIPIINP SSNPDTVSP MTTPSFTP+TT SGGSSWCIAS SASQAALQLALDYACG
Sbjct: 61  NIPTIPIINPASSNPDTVSPAMTTPSFTPSTTISGGSSWCIASQSASQAALQLALDYACG 120

Query: 121 MGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS 177
           +GGADCSSIQ GGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS
Sbjct: 121 IGGADCSSIQGGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPS 176

[Close]

BLAST of Cla013486 vs. NCBI nr
Match: gi|1009126412|ref|XP_015880140.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 3, partial [Ziziphus jujuba])

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-49
Identity = 101/143 (70.63%), Postives = 116/143 (81.12%), Query Frame = 1


Query: 42  KSSTHQKDITTPITTVPTIN-----IPTIPIINPTSSNPDTVSPTMTTPSFTPATTAS-- 101
           K ST ++DITTPITTVPT+        T P++NP +SNPD+ SP   TPS  P  TAS  
Sbjct: 42  KISTTKRDITTPITTVPTLTPTTTPTSTTPLLNP-NSNPDSSSPANMTPSLPPTITASPA 101

Query: 102 -GGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYY 161
             G+SWCIAS S+SQ ALQ+ALDYACG GGADCS+IQ+GG+CYNPNS+RDHASYAFNSYY
Sbjct: 102 SSGASWCIASQSSSQTALQVALDYACGYGGADCSAIQSGGSCYNPNSIRDHASYAFNSYY 161

Query: 162 QKNPLPNSCNFGGTAVITSTNPS 177
           QKNP+PNSCNFGGTAVITSTNPS
Sbjct: 162 QKNPVPNSCNFGGTAVITSTNPS 183

[Close]

BLAST of Cla013486 vs. NCBI nr
Match: gi|703120681|ref|XP_010102154.1| (hypothetical protein L484_021388 [Morus notabilis])

HSP 1 Score: 203.4 bits (516), Expect = 3.5e-49
Identity = 100/142 (70.42%), Postives = 119/142 (83.80%), Query Frame = 1


Query: 42  KSSTHQKDITTPITTVPTI--NIPT--IPIINPTSSNPDTVSPTMTTPSFTPATT---AS 101
           ++ST Q+DITTPITTVPTI  N PT   PI+NP +SNPD+ SP  TTP+ TP+ T   AS
Sbjct: 52  QTSTTQRDITTPITTVPTITPNNPTSSTPIMNP-NSNPDSTSPVTTTPTLTPSITTSPAS 111

Query: 102 GGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQ 161
            G+SWC++S  ASQ ALQ+ALDYACG GG DCS+IQ GG+CYNPN+++DHAS+AFNSYYQ
Sbjct: 112 TGASWCVSSQGASQIALQVALDYACGYGGTDCSAIQPGGSCYNPNTIQDHASFAFNSYYQ 171

Query: 162 KNPLPNSCNFGGTAVITSTNPS 177
           KNP+PNSCNFGGTAVITSTNPS
Sbjct: 172 KNPVPNSCNFGGTAVITSTNPS 192

The following BLAST results are available for this feature:

BLAST of Cla013486 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALL10_OLEEU	1.8e-21	43.70	Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1	[more]
E13B_WHEAT	5.5e-18	43.27	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	[more]
E1312_ARATH	7.2e-18	39.52	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV...	[more]
E131_ARATH	1.6e-17	53.75	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=...	[more]
PDCB2_ARATH	1.0e-16	49.38	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV...	[more]

BLAST of Cla013486 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDA3_CUCSA	4.9e-90	92.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139780 PE=4 SV=1	[more]
W9RHU1_9ROSA	2.5e-49	70.42	Uncharacterized protein OS=Morus notabilis GN=L484_021388 PE=4 SV=1	[more]
A0A0B2PWP6_GLYSO	9.4e-49	59.24	Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Glycine soja GN=glysoja_01993...	[more]
K7M4M3_SOYBN	9.4e-49	59.24	Uncharacterized protein OS=Glycine max GN=GLYMA_14G028400 PE=4 SV=1	[more]
B9GT34_POPTR	2.7e-48	59.90	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s06050g PE=4 SV=2	[more]

BLAST of Cla013486 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112882\|ref\|XP_008456350.1\|	4.9e-91	94.32	PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 1 [Cucumis melo]	[more]
gi\|778713155\|ref\|XP_011656991.1\|	7.1e-90	92.61	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5 isoform X1 [Cucumis sativus]	[more]
gi\|778713159\|ref\|XP_011656992.1\|	7.1e-90	92.61	PREDICTED: major pollen allergen Ole e 10 isoform X2 [Cucumis sativus]	[more]
gi\|1009126412\|ref\|XP_015880140.1\|	1.2e-49	70.63	PREDICTED: glucan endo-1,3-beta-glucosidase 3, partial [Ziziphus jujuba]	[more]
gi\|703120681\|ref\|XP_010102154.1\|	3.5e-49	70.42	hypothetical protein L484_021388 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018106	peptidyl-histidine phosphorylation
cellular_component	GO:0009365	protein histidine kinase complex
molecular_function	GO:0004673	protein histidine kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla013486	Cla013486	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla013486	Cla013486.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla013486.1.cds2	Cla013486.1.cds2	CDS
Cla013486.1.cds1	Cla013486.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 98..168 score: 9.7
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 98..178 score: 2.9
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 99..176 score: 3.6E-48coord: 49..73 score: 3.6
None	No IPR available	PANTHER	PTHR32227:SF127	CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN	coord: 49..73 score: 3.6E-48coord: 99..176 score: 3.6