Cla012520.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla012520
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Os01g0841200 protein (Fragment) (AHRD V1 **-- Q0JHU9_ORYSJ); contains Interpro domain(s) IPR004348 Protein of unknown function DUF246, plant
Location	Chr8 : 7034 .. 12385 (+)
Sequence length	924

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTATTTGCGTAAAGTCCTTCCGAAGCTCTTGCAATTGAGGTATGTTTTCCTTGTCTTAAAATAGGATTTTGATTTGAGAAGTTCTATCCCATTTAGATCTCCAGGGGTCCCATCCAGTTTGATAACGTTCATCAAATGTATATTTAAGACCAAATCTTGTAGATTCTTTTGATTTCAACAGTTTTAGACAATGACAAAAATTGCTTCTCATTCTGTGGTGTAGGGCTGTAAGGATTGCCCCATTCTCCAACCGGTTGGCTCATGGAGTTCCTTCAGATGTTCAAGCACTTAGATGCTTAGCCAATTTTGAAGCTTTGAGGTTTGCAGAATCTATAAGAATACTGGCAGATCTCATGGTTGATCGGATGATCAAAAAAAGCTCTCAGAGTGGAGGAAAATATATTTCTGTGCATCTTCGCTTTGAGGAGGTACTCATCGTGGTTTTTCTTTTAATTCATGATTACTAAGTTGCTTTTTAAGTGTAATTTATGACTAAAAATAAATATTCTGCTTATAAAAGGACATGGTTGCATTTTCGTGCTGTGAATATGATGGTGGAGAGGAAGAGAAGCATGAGATGGACCTGGCTAGAGAAAGGAGCTGGAGAGGAAAATTCAGAAGGAGGGGGAGGGTGATAAGGCCTGGTGCTAATAGGGTGGATGGAAAATGTCCTTTAACCCCACTGGAGGTGAATATACTTGGATTTCATCATCTTAATCAATTATCTGTTTTCAGTTTTCTGAAATAAAATTTTTAGGATGAAATGTGTATGTCGCACAAACACCTATTACTTAAGTACATCACACAATGGACACATTGATCACTGGTTGTTTCAAAAGGTAACCTACAGATGAATTGAAATATATATCTTTAAATATTTTAGTAATTTTATGTGATGAAATTTTGACAAAGTTTTCATAAAAACATTTCACATTTTATAAAAACTGGGCATCCAAAGACAAAAATTATGAATGCAGTTTAATAATAAATCAAACGTTCAATACGAAAAGAAATGAAATAATACAAGGGTATCTAAAAAAAAACGAAGTACACAAAAGGGAATCCAACTAAAGAAAGAGACTCCAATCAAGTAAAATAGGATCTAAAGAATAATTGTGAGAAGCCTTTGTCATTGATGCTCAAAGAGAAGCATAGAACTTAACAAGGGACTAAACTTTGGTAGAGTCTCTCCCATCCCTCTCTAAAGGTCCTATTATTCCTCTCACGCCACAAACTCCACAACAGCTTTGCATAAATCTCCTCCCATTCTCTCGAAAAGGAAGATGGGGAAGGAGCTCCTCAATTAATCTCCCTATAGCCGCTGTGTATAGCAAACTGAAAGGAAACCATGCCAAAAAAGAGACTACAAACAGTTTGAGCAAAGTCCCTGCTCCAAAGAGTATGATCAAGATCTTCCATTGTCAACATAGAAGGCAACCAAATGACCCAATCAAAGCAGACAACTTTTTCAAAAGCGGATTTAATCTGTTAGCTCTTCTATGGGTGACATGCCAAACAAACAATTGAACCTTCTTTGGAATTTTTATCTTCCAAAAAGACCAAAAAACATACTCATGGCTGGGGAGGGAATCAACAAATGTTGAGAGAAAGATATACAAGAAAAACCTTTAGCGGGGTTAGGACTATGAGAACAGATATCCCTTCTTCCCAACCTGAGCTCAAACTCTCCAATCAAAGATATGAGAGATAAAGATGTTAATCGTTTCCCTATCAGATAATGGACGATGGAAACCAAGTGAAGGAAAGTGAGAGCTCCCATAAGCCACTGAACAATTTTTCCTAGAGGACTGGAAAATAGAGCAAAGGTACATTCCCCAAATTCAAGCCCGCCAAGATTCATGGGCTTCCCCACCGTCTCCCAACTCACCAAAAATGCACATTCCTCCCCTCATCAATCCTTTCCCACCAAAAGCGTAATTTTACTAACCAAACAAGCTCTACAAAGGGAGAAGAAATAAATAGGGATATTCTTCATGTTGATTCTTTTTGTAATCTTGTACTACCTCTTTACCTTTTTTTCTCAATAATATGTGGGGTTGGGGATGTGAACATTTGACTGCTTGGTCGAGTCGAGAGTATATGTCTAAACCAATTGAACTATGGTCTATGCTCAAGTTGGCTCCTAATTTCTTTATGACTATGTTGTCTTGATGATTATTGATTGTCAAGTAGTTTTCTTCGAGGGAGTTTCCTCTGCCCTGACTCTTAGGCTGTCTTTTCTTATTTTTTTTTTTTAAGCACATTGTTTGTTTAAACTTCAAAAGAAGTTCTTAACATTATATATATAAAGCTAAGAAAGTTTCCGTAGAGGTTAGGAAGGATCAACGTAAATTCTTAAATCACCAATTGACCCAAAAGCTTAAGCTTTTAGCCTATGGGTGAAGGCAAAATGGCAAATTTAATACTATATTATCTAATACTCCCCTTCATTTGCGAGCTTGAGATATGAAGAAGACCCAACAAGTGGAAATCAATATCAAATGAGGAGGAAATAACTATGCAGGGGTTTGAACACAGGACCTCCCAAGACCACCTGCTCTAATACAATCTTTTTATTATTGTTATCATTATTATTATTTTTTTTAATGAGAAAGAGGAATTGTAATTTCATTGATTCTATGAAATTACAAAAGGGCAAATGAGCCATGAGAGTTTACATATTGCTTTTGCAGTGTGCTATAAGAGCAGTAAGATTGTAATCTCAAAAAGAAGACGTGAATTTACACCAAGATAAAGATGTGTACAAAAGAAAATAAAAAAGCTGAGTGAAATCCATATCTTTGTCTTCAAAAAGGCGTTGATTCCGTTCTTTCCAAATGAGCCAAGGAAGCCTTTGATGATAAAATCCCACATAATCGCCTTCTCATTCTTAAAAGGATGACCGGTCAGAAGCATGCTTAAGAGAATGAGGGAGTCATTATAATAGTTGTAGTATGAGAAGATTCTTCTCCAAAAAGATTGAGCAAATTCACAAAAAACCAGGATGTGCATAATGGTTTGCATAATGGTTTCATCACTCCGATGACATAGGACGCTCCAATTTAGAGCAGTTGCCATCCTGGGGCCTTTTTTGTGAGAACTTTGGTTGTCTTAATGCTAATGTGGCTGATCTCCCCTAGGAAGTAGGACGCTCCAATTTAGAGCAGTTGCCATCCTGGGGCCTTTTCTATGAGAACTTCGGTTGTCTTAATGCTAATGTGGCTGATCTCCCCTAGGAAGAAACGAAACTTCTTGGGAATAGGGCCCCTCCAAATATTTTTATAAAGGAGGGAGTTTTGATCTTTACCACTAGAAGCGAGATGTTGGCATAGGCATTTCGTAGTAAAATGACCAAACTTATCCAGATTCCATCTCCATTTGTCTTCCACCTCGGTGTCATATGGGGCAACAAGGAGGTAGAGAGAAGAGACCACTCATTATTCTCTTCGTCATTAAGGTTACGCCTTAACCCAAGATCCCATACTTCATAATCCGATTGACTCAAAAGCTTAAATAGTAAATGGTTAAGAGGGGATAGGTTCAAGTCAATAGTGGTCACCTTTGGGATTTAATCTTTTCTTGGCAACCAAATCTAGTAGGGTCAAGAAAGTTGCCCTATGAGAATTTTCGAGTTGCATAGATGATGCTTGAGCACACACAAAGATATGTTAAAGGATATTTAGAACCATGACATGGTCAGTTAAATGTTTGCTGAATTTCAAACCATCTTGTTATCTTAACATCAATATTCTGGATCATTCTTTGTGGCAGTGAAAAAATCTGTTAGTGCTGATCGATTTTGAATTAAAGTGCCTAGTGTATTGTTGCAGAGTTTATTTGAACCATCAATTATTGCTATTTTGTGTACATGTTTTTGCTGCTTGAGAATCTTGTGAAGACCCTTCATTATTTACAATTGCAAAGCTAGAGCGATCATTCACTTCTCCTTATCTCTTGTGATTTTGTTGATAACTTGCCACATGAAGGGGCAAGATTTAGAACATTTTGCTGCTTCATTTATTGTCCTTGCATCTTAAAATTTTTGGAACGCCTATCCTTTTTATTCCTTTCTTCGTGCTTTATTCTTTTGTCGGTAATTTGAAACTTTACTTGTTGAGACTTTGTATTATTGTTGGATTTGTCTGCCTTTGGCCATTGTTTCACAATAATGTTCTATTGCAATGAAAACTTTTGGTCCTGCAAGAGAAAGTCTATGCAGGGCCAATAACAATAATGCATCCATATCCTCAGAACCTGTGTTTCCAGTCTGCTGATTCATAATTCACCTTTATATGATATTGTAGGTCGGACTGATGCTTAGAGGAATGGGTTTTGATAATACAACTTCCATATATGTTGCAGCAGGAAAAATTTATAAAGCAGAGAAGTATATGGCTCCACTTAGGCAGATGTTTCCACGTTTAGAAACTAAAGATACTATAGCTACTAAGGAAGAACTTGCTCCATTCCAGGTATTTTGTCAAATTATTCTTAGGTTTATCTTACAAACAAGTTGTTTGTTTAGCTCAAAGTAAGTCTGTGATGCAGGGCCACTCTTCTCGATTGGCTGCTCTTGATTACACAGTATGTCTTCATAGTGAAGTCTTTGTCACAACTCAAGGTGGGAATTTCCCCCACTTTTTGACGGGTCACAGGCGCTATATTTATGGCGGACATGCAAAGACAGTCAAACCAGATAAGAGGAAACTAGCATTAATTTTTGATGATCCTAATATACGGTATGCTGAAGCTTTACACCTACTTTTTTTTGTTTTCATTTGTTGAACGTCTGTGCCTCATTATTGTGTTATAAAACTGGTTCAATTAAGTTCTGTAACTTTAAGATCTGCATTTTGGATAACTTGAAACTTAATTATCTCCCTTAACGCATTACCTGGTTAAGTCAGGTCAGCTTGTTTGTCTAAAATAAGAACTGAATGACCAAATGCATAATCGTACCTAAGAATATACGAATTATGCAACTGCTTCATTCACAACCATAATAATGATTACTTAAGTTCCAATATATGATTTCATGTGTTTTGAAGATGAGAACCAAATGACAGTGCTGCATTGTTAACCAGAAACGTTCACTGTAGTTTTGATTTATTATCTTATGTAGTTCATTGATTATATCTTTCTGGTTATACTCACATTTCTGATTTCTCTGTTAATTTTTGATAACAAACTCACAAATAGATGGCAAAACTTCGCGCAACAAATGCAAGATATGCTTCGCCACAACGATCAAAAGGGAATGGAAATGAAAAAGCCCAGTGGATCGTTGTATACGTTTCCCATGCCAGATTGCATGTGCAAAGTACCAAACACGAAGAACCATGATTAA

mRNA sequence

ATGTACTATTTGCGTAAAGTCCTTCCGAAGCTCTTGCAATTGAGGGCTGTAAGGATTGCCCCATTCTCCAACCGGTTGGCTCATGGAGTTCCTTCAGATGTTCAAGCACTTAGATGCTTAGCCAATTTTGAAGCTTTGAGGTTTGCAGAATCTATAAGAATACTGGCAGATCTCATGGTTGATCGGATGATCAAAAAAAGCTCTCAGAGTGGAGGAAAATATATTTCTGTGCATCTTCGCTTTGAGGAGGACATGGTTGCATTTTCGTGCTGTGAATATGATGGTGGAGAGGAAGAGAAGCATGAGATGGACCTGGCTAGAGAAAGGAGCTGGAGAGGAAAATTCAGAAGGAGGGGGAGGGTGATAAGGCCTGGTGCTAATAGGGTGGATGGAAAATGTCCTTTAACCCCACTGGAGGTCGGACTGATGCTTAGAGGAATGGGTTTTGATAATACAACTTCCATATATGTTGCAGCAGGAAAAATTTATAAAGCAGAGAAGTATATGGCTCCACTTAGGCAGATGTTTCCACGTTTAGAAACTAAAGATACTATAGCTACTAAGGAAGAACTTGCTCCATTCCAGGGCCACTCTTCTCGATTGGCTGCTCTTGATTACACAGTATGTCTTCATAGTGAAGTCTTTGTCACAACTCAAGGTGGGAATTTCCCCCACTTTTTGACGGGTCACAGGCGCTATATTTATGGCGGACATGCAAAGACAGTCAAACCAGATAAGAGGAAACTAGCATTAATTTTTGATGATCCTAATATACGATGGCAAAACTTCGCGCAACAAATGCAAGATATGCTTCGCCACAACGATCAAAAGGGAATGGAAATGAAAAAGCCCAGTGGATCGTTGTATACGTTTCCCATGCCAGATTGCATGTGCAAAGTACCAAACACGAAGAACCATGATTAA

Coding sequence (CDS)

ATGTACTATTTGCGTAAAGTCCTTCCGAAGCTCTTGCAATTGAGGGCTGTAAGGATTGCCCCATTCTCCAACCGGTTGGCTCATGGAGTTCCTTCAGATGTTCAAGCACTTAGATGCTTAGCCAATTTTGAAGCTTTGAGGTTTGCAGAATCTATAAGAATACTGGCAGATCTCATGGTTGATCGGATGATCAAAAAAAGCTCTCAGAGTGGAGGAAAATATATTTCTGTGCATCTTCGCTTTGAGGAGGACATGGTTGCATTTTCGTGCTGTGAATATGATGGTGGAGAGGAAGAGAAGCATGAGATGGACCTGGCTAGAGAAAGGAGCTGGAGAGGAAAATTCAGAAGGAGGGGGAGGGTGATAAGGCCTGGTGCTAATAGGGTGGATGGAAAATGTCCTTTAACCCCACTGGAGGTCGGACTGATGCTTAGAGGAATGGGTTTTGATAATACAACTTCCATATATGTTGCAGCAGGAAAAATTTATAAAGCAGAGAAGTATATGGCTCCACTTAGGCAGATGTTTCCACGTTTAGAAACTAAAGATACTATAGCTACTAAGGAAGAACTTGCTCCATTCCAGGGCCACTCTTCTCGATTGGCTGCTCTTGATTACACAGTATGTCTTCATAGTGAAGTCTTTGTCACAACTCAAGGTGGGAATTTCCCCCACTTTTTGACGGGTCACAGGCGCTATATTTATGGCGGACATGCAAAGACAGTCAAACCAGATAAGAGGAAACTAGCATTAATTTTTGATGATCCTAATATACGATGGCAAAACTTCGCGCAACAAATGCAAGATATGCTTCGCCACAACGATCAAAAGGGAATGGAAATGAAAAAGCCCAGTGGATCGTTGTATACGTTTCCCATGCCAGATTGCATGTGCAAAGTACCAAACACGAAGAACCATGATTAA

Protein sequence

MYYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVDRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRVIRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLETKDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKTVKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVPNTKNHD

Homology

[Close]

BLAST of Cla012520 vs. Swiss-Prot
Match: Y1491_ARATH (Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43
Identity = 115/311 (36.98%), Postives = 175/311 (56.27%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPS-DVQALRCLANFEALRFAESIRILADLMV 61
           +YL   L  + +  A+ + PFS+RLA  + + + Q LRC  N+ ALRF   I  L++ +V
Sbjct: 188 WYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMKLSESIV 247

Query: 62  DRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGR 121
           D++     +S G ++S+HLRFE DM+AF+ C      EE+  +   R+ ++  K     R
Sbjct: 248 DKL-----RSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKENFADK-----R 307

Query: 122 VIRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLE 181
           +I     R  GKCPLTP EVGL+LR M FDN+T IY+AAG+++  E++M P R +FPRL+
Sbjct: 308 LIY-NERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRLD 367

Query: 182 TKDTIATKEEL-APFQGHSSRLAALDYTVCLHSEVFVTTQGG--NFPHFLTGHRRYIYGG 241
              ++   EEL A  QG     +A+DY VCL S++F+ T  G  NF + L GHR  +Y G
Sbjct: 368 NHSSVDPSEELSATSQGLIG--SAVDYMVCLLSDIFMPTYDGPSNFANNLLGHR--LYYG 427

Query: 242 HAKTVKPDKRKLALIF-DDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDC 301
              T++PD++ LA IF      +   F + ++ ++   +  G   +    S YT   P+C
Sbjct: 428 FRTTIRPDRKALAPIFIAREKGKRAGFEEAVRRVMLKTNFGGPHKRVSPESFYTNSWPEC 483

Query: 302 MCKVPNTKNHD 308
            C++   K+ D
Sbjct: 488 FCQMNPKKSSD 483

[Close]

BLAST of Cla012520 vs. TrEMBL
Match: M5XQ50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003505mg PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 1.1e-152
Identity = 257/306 (83.99%), Postives = 284/306 (92.81%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVD 61
           YYL+KVLPKL ++ AVRIAPFSNRLAH VPS+VQ LRCLANFEALRF+ SIRILAD MVD
Sbjct: 253 YYLQKVLPKLEKMGAVRIAPFSNRLAHAVPSNVQRLRCLANFEALRFSNSIRILADKMVD 312

Query: 62  RMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRV 121
           RMIK SS SGGKY+SVHLRFEEDMVAFSCCEYDGGEEEK EMD+ARER WRGKFRRRGRV
Sbjct: 313 RMIKSSSHSGGKYVSVHLRFEEDMVAFSCCEYDGGEEEKREMDIARERGWRGKFRRRGRV 372

Query: 122 IRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLET 181
           IRPGANRVDGKCPLTPLEVG+MLRGMGFDNTTS+Y+AAGKIYKAEKYMAPL+QMFPRLE 
Sbjct: 373 IRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYIAAGKIYKAEKYMAPLKQMFPRLEM 432

Query: 182 KDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKT 241
           KDT+AT EELAPFQGH SRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRY+YGGH+KT
Sbjct: 433 KDTLATAEELAPFQGHLSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKT 492

Query: 242 VKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVP 301
           + PDKRKLAL+FD+P+IRW++F +Q+QDMLRH+DQKG+E+KKPS SLYTFPMPDCMCK  
Sbjct: 493 INPDKRKLALLFDNPSIRWEDFKRQVQDMLRHSDQKGVELKKPSASLYTFPMPDCMCKEA 552

Query: 302 NTKNHD 308
             +N +
Sbjct: 553 EARNEN 558

[Close]

BLAST of Cla012520 vs. TrEMBL
Match: V4TDS7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000533mg PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 4.3e-152
Identity = 257/304 (84.54%), Postives = 282/304 (92.76%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVD 61
           +YL+KVLPKL QL AVRIAPFSNRLA GVPS++Q LRCLANFEALRF+E IR+LA+ MVD
Sbjct: 343 HYLQKVLPKLQQLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVD 402

Query: 62  RMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRV 121
           RM+K SSQSGGKY+SVHLRFE DMVAFSCCEYDGGEEEKHEMD+ARERSWRGKFR+RGRV
Sbjct: 403 RMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKHEMDIARERSWRGKFRKRGRV 462

Query: 122 IRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLET 181
           IRPGANRVDGKCPLTPLEVG+MLRGMGFDNTTS+YVAAGKIYKAEKY+APLRQMFPRLET
Sbjct: 463 IRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLET 522

Query: 182 KDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKT 241
           KDT+AT EELA F+GHSSRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRY+YGGHAKT
Sbjct: 523 KDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKT 582

Query: 242 VKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVP 301
           +KPDKRKLAL+FD PNIRW +F +QM+DML H+D KG E++KPS SLYTFPMPDCMCK P
Sbjct: 583 IKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDVKGSELRKPSASLYTFPMPDCMCKQP 642

Query: 302 NTKN 306
              N
Sbjct: 643 EASN 646

[Close]

BLAST of Cla012520 vs. TrEMBL
Match: V4T3S2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000533mg PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 4.3e-152
Identity = 257/304 (84.54%), Postives = 282/304 (92.76%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVD 61
           +YL+KVLPKL QL AVRIAPFSNRLA GVPS++Q LRCLANFEALRF+E IR+LA+ MVD
Sbjct: 132 HYLQKVLPKLQQLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVD 191

Query: 62  RMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRV 121
           RM+K SSQSGGKY+SVHLRFE DMVAFSCCEYDGGEEEKHEMD+ARERSWRGKFR+RGRV
Sbjct: 192 RMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKHEMDIARERSWRGKFRKRGRV 251

Query: 122 IRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLET 181
           IRPGANRVDGKCPLTPLEVG+MLRGMGFDNTTS+YVAAGKIYKAEKY+APLRQMFPRLET
Sbjct: 252 IRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLET 311

Query: 182 KDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKT 241
           KDT+AT EELA F+GHSSRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRY+YGGHAKT
Sbjct: 312 KDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKT 371

Query: 242 VKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVP 301
           +KPDKRKLAL+FD PNIRW +F +QM+DML H+D KG E++KPS SLYTFPMPDCMCK P
Sbjct: 372 IKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDVKGSELRKPSASLYTFPMPDCMCKQP 431

Query: 302 NTKN 306
              N
Sbjct: 432 EASN 435

[Close]

BLAST of Cla012520 vs. TrEMBL
Match: V4SJC0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000533mg PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 4.3e-152
Identity = 257/304 (84.54%), Postives = 282/304 (92.76%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVD 61
           +YL+KVLPKL QL AVRIAPFSNRLA GVPS++Q LRCLANFEALRF+E IR+LA+ MVD
Sbjct: 257 HYLQKVLPKLQQLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVD 316

Query: 62  RMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRV 121
           RM+K SSQSGGKY+SVHLRFE DMVAFSCCEYDGGEEEKHEMD+ARERSWRGKFR+RGRV
Sbjct: 317 RMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKHEMDIARERSWRGKFRKRGRV 376

Query: 122 IRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLET 181
           IRPGANRVDGKCPLTPLEVG+MLRGMGFDNTTS+YVAAGKIYKAEKY+APLRQMFPRLET
Sbjct: 377 IRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLET 436

Query: 182 KDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKT 241
           KDT+AT EELA F+GHSSRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRY+YGGHAKT
Sbjct: 437 KDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKT 496

Query: 242 VKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVP 301
           +KPDKRKLAL+FD PNIRW +F +QM+DML H+D KG E++KPS SLYTFPMPDCMCK P
Sbjct: 497 IKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDVKGSELRKPSASLYTFPMPDCMCKQP 556

Query: 302 NTKN 306
              N
Sbjct: 557 EASN 560

[Close]

BLAST of Cla012520 vs. TrEMBL
Match: B9T5R6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1147840 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 5.7e-152
Identity = 255/304 (83.88%), Postives = 284/304 (93.42%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVD 61
           YYL+KVLPKL+Q+RAVRIAPFSNRLAH VP D+Q LRCLANFEALRFAE IR LA+ MVD
Sbjct: 272 YYLQKVLPKLIQMRAVRIAPFSNRLAHAVPPDIQRLRCLANFEALRFAEPIRTLAEKMVD 331

Query: 62  RMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRV 121
           RM+K SSQSG KY+SVHLRFE DMVAFSCCEYDGGEEEKHEMD+ARE+ WRGKFRRRGRV
Sbjct: 332 RMVKNSSQSGEKYVSVHLRFEMDMVAFSCCEYDGGEEEKHEMDIAREKGWRGKFRRRGRV 391

Query: 122 IRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLET 181
           IRPGANRVDGKCPLTPLEVG+MLRGMGFDNTTS+YVAAG IYKAEK+MAPL+Q+FPRLET
Sbjct: 392 IRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGNIYKAEKFMAPLKQIFPRLET 451

Query: 182 KDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKT 241
           KDT+AT EELAPF+GHSSRLAALDYTVCL+SEVFVTTQGGNFPHFL GHRRY+YGGHAKT
Sbjct: 452 KDTLATAEELAPFKGHSSRLAALDYTVCLNSEVFVTTQGGNFPHFLMGHRRYLYGGHAKT 511

Query: 242 VKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVP 301
           +KPDKRKLA++FD P+IRW+ F +QMQDMLRH+D KG E++KPSGSLYTFPMPDCMCK P
Sbjct: 512 LKPDKRKLAVLFDKPSIRWEVFKRQMQDMLRHSDLKGSELRKPSGSLYTFPMPDCMCKPP 571

Query: 302 NTKN 306
            T++
Sbjct: 572 ETRH 575

[Close]

BLAST of Cla012520 vs. NCBI nr
Match: gi|449447613|ref|XP_004141562.1| (PREDICTED: uncharacterized protein At1g04910 [Cucumis sativus])

HSP 1 Score: 615.1 bits (1585), Expect = 6.4e-173
Identity = 297/307 (96.74%), Postives = 303/307 (98.70%), Query Frame = 1


Query: 1   MYYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMV 60
           MYYL KVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIR+LADLMV
Sbjct: 267 MYYLHKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRMLADLMV 326

Query: 61  DRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGR 120
           DRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGR
Sbjct: 327 DRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGR 386

Query: 121 VIRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLE 180
           VIRPG NRVDGKCPLTPLEVG+MLRGMGFDNT+SIYVAAGKIYKAEK+MAPLRQMFPRLE
Sbjct: 387 VIRPGVNRVDGKCPLTPLEVGMMLRGMGFDNTSSIYVAAGKIYKAEKFMAPLRQMFPRLE 446

Query: 181 TKDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAK 240
           TKDTIATKEELAPF+GHSSRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRYIYGGHAK
Sbjct: 447 TKDTIATKEELAPFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYIYGGHAK 506

Query: 241 TVKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKV 300
           TVKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKK SGSLYTFPMPDCMCKV
Sbjct: 507 TVKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKSSGSLYTFPMPDCMCKV 566

Query: 301 PNTKNHD 308
           PN+KNHD
Sbjct: 567 PNSKNHD 573

[Close]

BLAST of Cla012520 vs. NCBI nr
Match: gi|659119453|ref|XP_008459666.1| (PREDICTED: uncharacterized protein At1g04910 [Cucumis melo])

HSP 1 Score: 612.8 bits (1579), Expect = 3.2e-172
Identity = 297/307 (96.74%), Postives = 301/307 (98.05%), Query Frame = 1


Query: 1   MYYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMV 60
           MYYL KVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIR+LADLMV
Sbjct: 250 MYYLHKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRMLADLMV 309

Query: 61  DRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGR 120
           DRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGR
Sbjct: 310 DRMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGR 369

Query: 121 VIRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLE 180
           VIRPG NRVDGKCPLTPLEVG+MLRGMGFDNT+SIYVAAGKIYKAEKYMAPLRQMFPRLE
Sbjct: 370 VIRPGVNRVDGKCPLTPLEVGMMLRGMGFDNTSSIYVAAGKIYKAEKYMAPLRQMFPRLE 429

Query: 181 TKDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAK 240
           TKDTIATKEELAPF+ HSSRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRYIY GHAK
Sbjct: 430 TKDTIATKEELAPFKRHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYIYAGHAK 489

Query: 241 TVKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKV 300
           TVKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKK SGSLYTFPMPDCMCKV
Sbjct: 490 TVKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKSSGSLYTFPMPDCMCKV 549

Query: 301 PNTKNHD 308
           PNTKNHD
Sbjct: 550 PNTKNHD 556

[Close]

BLAST of Cla012520 vs. NCBI nr
Match: gi|596141517|ref|XP_007222464.1| (hypothetical protein PRUPE_ppa003505mg [Prunus persica])

HSP 1 Score: 547.4 bits (1409), Expect = 1.6e-152
Identity = 257/306 (83.99%), Postives = 284/306 (92.81%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVD 61
           YYL+KVLPKL ++ AVRIAPFSNRLAH VPS+VQ LRCLANFEALRF+ SIRILAD MVD
Sbjct: 253 YYLQKVLPKLEKMGAVRIAPFSNRLAHAVPSNVQRLRCLANFEALRFSNSIRILADKMVD 312

Query: 62  RMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRV 121
           RMIK SS SGGKY+SVHLRFEEDMVAFSCCEYDGGEEEK EMD+ARER WRGKFRRRGRV
Sbjct: 313 RMIKSSSHSGGKYVSVHLRFEEDMVAFSCCEYDGGEEEKREMDIARERGWRGKFRRRGRV 372

Query: 122 IRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLET 181
           IRPGANRVDGKCPLTPLEVG+MLRGMGFDNTTS+Y+AAGKIYKAEKYMAPL+QMFPRLE 
Sbjct: 373 IRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYIAAGKIYKAEKYMAPLKQMFPRLEM 432

Query: 182 KDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKT 241
           KDT+AT EELAPFQGH SRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRY+YGGH+KT
Sbjct: 433 KDTLATAEELAPFQGHLSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKT 492

Query: 242 VKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVP 301
           + PDKRKLAL+FD+P+IRW++F +Q+QDMLRH+DQKG+E+KKPS SLYTFPMPDCMCK  
Sbjct: 493 INPDKRKLALLFDNPSIRWEDFKRQVQDMLRHSDQKGVELKKPSASLYTFPMPDCMCKEA 552

Query: 302 NTKNHD 308
             +N +
Sbjct: 553 EARNEN 558

[Close]

BLAST of Cla012520 vs. NCBI nr
Match: gi|567884049|ref|XP_006434583.1| (hypothetical protein CICLE_v10000533mg [Citrus clementina])

HSP 1 Score: 545.4 bits (1404), Expect = 6.2e-152
Identity = 257/304 (84.54%), Postives = 282/304 (92.76%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVD 61
           +YL+KVLPKL QL AVRIAPFSNRLA GVPS++Q LRCLANFEALRF+E IR+LA+ MVD
Sbjct: 257 HYLQKVLPKLQQLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVD 316

Query: 62  RMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRV 121
           RM+K SSQSGGKY+SVHLRFE DMVAFSCCEYDGGEEEKHEMD+ARERSWRGKFR+RGRV
Sbjct: 317 RMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKHEMDIARERSWRGKFRKRGRV 376

Query: 122 IRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLET 181
           IRPGANRVDGKCPLTPLEVG+MLRGMGFDNTTS+YVAAGKIYKAEKY+APLRQMFPRLET
Sbjct: 377 IRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLET 436

Query: 182 KDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKT 241
           KDT+AT EELA F+GHSSRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRY+YGGHAKT
Sbjct: 437 KDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKT 496

Query: 242 VKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVP 301
           +KPDKRKLAL+FD PNIRW +F +QM+DML H+D KG E++KPS SLYTFPMPDCMCK P
Sbjct: 497 IKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDVKGSELRKPSASLYTFPMPDCMCKQP 556

Query: 302 NTKN 306
              N
Sbjct: 557 EASN 560

[Close]

BLAST of Cla012520 vs. NCBI nr
Match: gi|694368517|ref|XP_009362464.1| (PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 545.4 bits (1404), Expect = 6.2e-152
Identity = 257/304 (84.54%), Postives = 282/304 (92.76%), Query Frame = 1


Query: 2   YYLRKVLPKLLQLRAVRIAPFSNRLAHGVPSDVQALRCLANFEALRFAESIRILADLMVD 61
           YYL+KVLPKL Q+ AVRIAPFSNRLA  VPS VQ LRCLANFE LRF+ SIR LAD MV+
Sbjct: 135 YYLQKVLPKLEQMGAVRIAPFSNRLALAVPSKVQRLRCLANFETLRFSNSIRTLADKMVE 194

Query: 62  RMIKKSSQSGGKYISVHLRFEEDMVAFSCCEYDGGEEEKHEMDLARERSWRGKFRRRGRV 121
           RM+K SSQ GGKY+SVHLRFEEDMVAFSCCEYDGGEEEKHEMD+ARERSWRGKFRRRGRV
Sbjct: 195 RMVKSSSQRGGKYVSVHLRFEEDMVAFSCCEYDGGEEEKHEMDIARERSWRGKFRRRGRV 254

Query: 122 IRPGANRVDGKCPLTPLEVGLMLRGMGFDNTTSIYVAAGKIYKAEKYMAPLRQMFPRLET 181
           IRPGANRVDGKCPLTPLEVG+MLRGMGFDNTTS+YVAAGKIYKAEKYMAPL+QMFP LE 
Sbjct: 255 IRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYMAPLKQMFPHLEM 314

Query: 182 KDTIATKEELAPFQGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLTGHRRYIYGGHAKT 241
           KDT+AT EELAPF+GH SRLAALDYTVCLHSEVFVTTQGGNFPHFL GHRRY+YGGH+KT
Sbjct: 315 KDTLATAEELAPFKGHLSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKT 374

Query: 242 VKPDKRKLALIFDDPNIRWQNFAQQMQDMLRHNDQKGMEMKKPSGSLYTFPMPDCMCKVP 301
           +KPDKRKLAL+FD+PNIRW++F +QMQDMLRH+DQKG+E+KKPS SLYTFPMPDCMCK  
Sbjct: 375 IKPDKRKLALLFDNPNIRWEDFKRQMQDMLRHSDQKGVELKKPSASLYTFPMPDCMCKEA 434

Query: 302 NTKN 306
           + +N
Sbjct: 435 DARN 438

The following BLAST results are available for this feature:

BLAST of Cla012520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1491_ARATH	1.6e-43	36.98	Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1	[more]

BLAST of Cla012520 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XQ50_PRUPE	1.1e-152	83.99	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003505mg PE=4 SV=1	[more]
V4TDS7_9ROSI	4.3e-152	84.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000533mg PE=4 SV=1	[more]
V4T3S2_9ROSI	4.3e-152	84.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000533mg PE=4 SV=1	[more]
V4SJC0_9ROSI	4.3e-152	84.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000533mg PE=4 SV=1	[more]
B9T5R6_RICCO	5.7e-152	83.88	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1147840 PE=4 SV=1	[more]

BLAST of Cla012520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447613\|ref\|XP_004141562.1\|	6.4e-173	96.74	PREDICTED: uncharacterized protein At1g04910 [Cucumis sativus]	[more]
gi\|659119453\|ref\|XP_008459666.1\|	3.2e-172	96.74	PREDICTED: uncharacterized protein At1g04910 [Cucumis melo]	[more]
gi\|596141517\|ref\|XP_007222464.1\|	1.6e-152	83.99	hypothetical protein PRUPE_ppa003505mg [Prunus persica]	[more]
gi\|567884049\|ref\|XP_006434583.1\|	6.2e-152	84.54	hypothetical protein CICLE_v10000533mg [Citrus clementina]	[more]
gi\|694368517\|ref\|XP_009362464.1\|	6.2e-152	84.54	PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Pyrus x bretschnei...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR019378	GDP-Fuc_O-FucTrfase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla012520	Cla012520	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla012520	Cla012520.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla012520.1.cds1	Cla012520.1.cds1	CDS
Cla012520.1.cds2	Cla012520.1.cds2	CDS
Cla012520.1.cds3	Cla012520.1.cds3	CDS
Cla012520.1.cds4	Cla012520.1.cds4	CDS
Cla012520.1.cds5	Cla012520.1.cds5	CDS
Cla012520.1.cds6	Cla012520.1.cds6	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019378	GDP-fucose protein O-fucosyltransferase	PFAM	PF10250	O-FucT	coord: 2..233 score: 4.3
None	No IPR available	PANTHER	PTHR31288	FAMILY NOT NAMED	coord: 1..307 score: 5.1E
None	No IPR available	PANTHER	PTHR31288:SF8	O-FUCOSYLTRANSFERASE-LIKE PROTEIN	coord: 1..307 score: 5.1E