Cla011020.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla011020
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr1 : 17144782 .. 17145341 (-)
Sequence length	342

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCGTGAGCAACACGATCATTTAAGCCAGCAGATAGACGACCTGAGGAAGTTTATAAATCGTCTATGCCAGGTTAGATTCTATTCCTTCCGTTTGTTTTTTTTTCCATACTGATCGCATACTAACAGTTAAGCGATCACATACAAATTGTATGCGATCACATATAAATGGTATGCGATTGCATACAAATGATAAGTTATCGCTTAACTGTTAGTATGCGATCGCTTAGCATTTGTATGCGATTGCGTCCAATTGTTTGTCTAACATATTTCTTTGTTTGTCTGATTCAGAGTGGTGACGATGACGACAGAGAATACAATGGGAAGAACGAGGGTGGTGATGGAGATGGTCAAGCTGACGACCAACCCACCGAAGAAGAAGGGGGTGGCGGGGGTCACGAAAGAGGAGAGACTGAGGAAATGGCGATAGTGGTTTACGACAAAGCCATAGAGGAAGAAACCACTATCGCCACCAATGAAGAACCCACCCCAATCGACCCCCCCACGACACAGCCACCCTTCATCGAAGAGCTCCCCATTGAAGTGCTCCCCACTTAA

mRNA sequence

ATGGTTCGTGAGCAACACGATCATTTAAGCCAGCAGATAGACGACCTGAGGAAGTTTATAAATCGTCTATGCCAGAGTGGTGACGATGACGACAGAGAATACAATGGGAAGAACGAGGGTGGTGATGGAGATGGTCAAGCTGACGACCAACCCACCGAAGAAGAAGGGGGTGGCGGGGGTCACGAAAGAGGAGAGACTGAGGAAATGGCGATAGTGGTTTACGACAAAGCCATAGAGGAAGAAACCACTATCGCCACCAATGAAGAACCCACCCCAATCGACCCCCCCACGACACAGCCACCCTTCATCGAAGAGCTCCCCATTGAAGTGCTCCCCACTTAA

Coding sequence (CDS)

ATGGTTCGTGAGCAACACGATCATTTAAGCCAGCAGATAGACGACCTGAGGAAGTTTATAAATCGTCTATGCCAGAGTGGTGACGATGACGACAGAGAATACAATGGGAAGAACGAGGGTGGTGATGGAGATGGTCAAGCTGACGACCAACCCACCGAAGAAGAAGGGGGTGGCGGGGGTCACGAAAGAGGAGAGACTGAGGAAATGGCGATAGTGGTTTACGACAAAGCCATAGAGGAAGAAACCACTATCGCCACCAATGAAGAACCCACCCCAATCGACCCCCCCACGACACAGCCACCCTTCATCGAAGAGCTCCCCATTGAAGTGCTCCCCACTTAA

Protein sequence

MVREQHDHLSQQIDDLRKFINRLCQSGDDDDREYNGKNEGGDGDGQADDQPTEEEGGGGGHERGETEEMAIVVYDKAIEEETTIATNEEPTPIDPPTTQPPFIEELPIEVLPT

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla011020	Cla011020	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla011020	Cla011020.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla011020.1.cds2	Cla011020.1.cds2	CDS
Cla011020.1.cds1	Cla011020.1.cds1	CDS