Cla007932.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007932
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Auxin efflux carrier protein 3 (AHRD V1 ***- C6ZJZ6_SOYBN); contains Interpro domain(s) IPR004776 Auxin efflux carrier
Location	Chr11 : 8863182 .. 8863883 (+)
Sequence length	702

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGCCGGCAAGGATGTTTATGACATTTTCACTGCAATCGTTCCAATGTACTTTCCACTAATAATCGCCTTCATTACTGTACGATGGTTCAATCTCTTCACCGCCGAGCAATCCGCCGGAATAAACCGCTTCGTCAGACTTCTGGCCATTCCATTCCTCTGCTTCCAAGTCATCTCCACCAACAATCTCCTCCAAATTAATCTCAAACTCTTCGCTGCCGATTCGCTTCAGAAGCTCGTCTTCCTCGCCGCTCTGTCTCTCTGGAAATTGCTCTGTAAGAACGCCTCTCTCGATTGGGTCATCACTCTCTTCTCTCTCTCCTGTCTTCCCAATACGCTCATCATCGGCCTTCCGATGACGACGGCGATGTACGGCCAAGCATCGGTTAGTTTCATGATTCAGACTGTGGTTTTTCAGAGCGCAATTTGGGTGAATGTGTTGATTTTTCTGTTCGAGTATAGAGCAGCGAGGATATTTTTCGCGGCGGAGAGTTCGAAATTTGCGGCGAAAGAGATGCGTTCGGAGAAAACAGAGGTGAGTGTTGTGTGTGTGGATGGAGATGGTAATGAAGGTTTTCCGGGGAAAGAGATACGTCCGACTGACGGCGGCGGTGGTTCTGGCCATTTTGGGCTGATTAAGGAGGCTGAGAAGAAAGATGAGCTCCGATTGGAGGATACGTCTTCTTCCATAGGTAATTAA

mRNA sequence

ATGATCGCCGGCAAGGATGTTTATGACATTTTCACTGCAATCGTTCCAATGTACTTTCCACTAATAATCGCCTTCATTACTGTACGATGGTTCAATCTCTTCACCGCCGAGCAATCCGCCGGAATAAACCGCTTCGTCAGACTTCTGGCCATTCCATTCCTCTGCTTCCAAGTCATCTCCACCAACAATCTCCTCCAAATTAATCTCAAACTCTTCGCTGCCGATTCGCTTCAGAAGCTCGTCTTCCTCGCCGCTCTGTCTCTCTGGAAATTGCTCTGTAAGAACGCCTCTCTCGATTGGGTCATCACTCTCTTCTCTCTCTCCTGTCTTCCCAATACGCTCATCATCGGCCTTCCGATGACGACGGCGATGTACGGCCAAGCATCGGTTAGTTTCATGATTCAGACTGTGGTTTTTCAGAGCGCAATTTGGGTGAATGTGTTGATTTTTCTGTTCGAGTATAGAGCAGCGAGGATATTTTTCGCGGCGGAGAGTTCGAAATTTGCGGCGAAAGAGATGCGTTCGGAGAAAACAGAGGTGAGTGTTGTGTGTGTGGATGGAGATGGTAATGAAGGTTTTCCGGGGAAAGAGATACGTCCGACTGACGGCGGCGGTGGTTCTGGCCATTTTGGGCTGATTAAGGAGGCTGAGAAGAAAGATGAGCTCCGATTGGAGGATACGTCTTCTTCCATAGGTAATTAA

Coding sequence (CDS)

ATGATCGCCGGCAAGGATGTTTATGACATTTTCACTGCAATCGTTCCAATGTACTTTCCACTAATAATCGCCTTCATTACTGTACGATGGTTCAATCTCTTCACCGCCGAGCAATCCGCCGGAATAAACCGCTTCGTCAGACTTCTGGCCATTCCATTCCTCTGCTTCCAAGTCATCTCCACCAACAATCTCCTCCAAATTAATCTCAAACTCTTCGCTGCCGATTCGCTTCAGAAGCTCGTCTTCCTCGCCGCTCTGTCTCTCTGGAAATTGCTCTGTAAGAACGCCTCTCTCGATTGGGTCATCACTCTCTTCTCTCTCTCCTGTCTTCCCAATACGCTCATCATCGGCCTTCCGATGACGACGGCGATGTACGGCCAAGCATCGGTTAGTTTCATGATTCAGACTGTGGTTTTTCAGAGCGCAATTTGGGTGAATGTGTTGATTTTTCTGTTCGAGTATAGAGCAGCGAGGATATTTTTCGCGGCGGAGAGTTCGAAATTTGCGGCGAAAGAGATGCGTTCGGAGAAAACAGAGGTGAGTGTTGTGTGTGTGGATGGAGATGGTAATGAAGGTTTTCCGGGGAAAGAGATACGTCCGACTGACGGCGGCGGTGGTTCTGGCCATTTTGGGCTGATTAAGGAGGCTGAGAAGAAAGATGAGCTCCGATTGGAGGATACGTCTTCTTCCATAGGTAATTAA

Protein sequence

MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVISTNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPMTTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEVSVVCVDGDGNEGFPGKEIRPTDGGGGSGHFGLIKEAEKKDELRLEDTSSSIGN

Homology

[Close]

BLAST of Cla007932 vs. Swiss-Prot
Match: PIN2_ORYSJ (Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 9.2e-47
Identity = 101/235 (42.98%), Postives = 137/235 (58.30%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI G+D+YD+  AIVP+Y  + +A+ +VRW+ +FT +Q +GINRFV + A+P L F  IS
Sbjct: 1   MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKN--------ASLDWVITLFSLSCLPN 120
           TN+   +N +  AADSLQKLV LAAL++W  L           ASLDW ITLFSLS LPN
Sbjct: 61  TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120

Query: 121 TLIIGLPMTTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKE 180
           TL++G+P+  AMYG  S S M+Q VV QS IW  +++FLFEYR A+   + +        
Sbjct: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180

Query: 181 MRSEKTEVSVVCVDG------DGNEGFPGK---------EIRPTDGGGGSGHFGL 213
           + S + +  VV ++G      D   G  G+             T GGGG+   G+
Sbjct: 181 IASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGGGAARSGV 235

[Close]

BLAST of Cla007932 vs. Swiss-Prot
Match: PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.5e-46
Identity = 92/187 (49.20%), Postives = 124/187 (66.31%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI G D Y + TA+VP+Y  +I+A+ +V+W+ +FT +Q +GINRFV L A+P L F  IS
Sbjct: 1   MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           TNN   +NL+  AAD+LQKL+ LA L+LW  L +  SL+W ITLFSLS LPNTL++G+P+
Sbjct: 61  TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
              MYG+ S S M+Q VV Q  IW  +++F+FEYR ARI    E     A  + S   + 
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILI-TEQFPDTAGAIASIVVDA 180

Query: 181 SVVCVDG 188
            VV +DG
Sbjct: 181 DVVSLDG 186

[Close]

BLAST of Cla007932 vs. Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45
Identity = 88/187 (47.06%), Postives = 127/187 (67.91%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI GKD+YD+  A+VP+Y  +I+A+ +VRW+ +FT +Q +GINRFV + A+P L F  IS
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           +N+   +N    AADSLQK+V LAAL LW+   +  SL+W+ITLFSLS LPNTL++G+P+
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
             AMYG  S + M+Q VV QS IW  +++FLFE+R A++   +E     A  + S + + 
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLI-SEQFPETAGSITSFRVDS 180

Query: 181 SVVCVDG 188
            V+ ++G
Sbjct: 181 DVISLNG 186

[Close]

BLAST of Cla007932 vs. Swiss-Prot
Match: PIN3_ARATH (Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44
Identity = 87/187 (46.52%), Postives = 128/187 (68.45%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI+  D+Y + TA++P+Y  +I+A+ +VRW+ +F+ +Q +GINRFV + A+P L F  IS
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           TNN   +NL+  AAD+LQK++ L+ L LW    ++ SL+W IT+FSLS LPNTL++G+P+
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
             AMYG+ S S M+Q VV Q  IW  +L+FLFE+R A++    +  + AA  + S K E 
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFPETAA-SIVSFKVES 180

Query: 181 SVVCVDG 188
            VV +DG
Sbjct: 181 DVVSLDG 186

[Close]

BLAST of Cla007932 vs. Swiss-Prot
Match: PIN1_ORYSJ (Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44
Identity = 89/187 (47.59%), Postives = 123/187 (65.78%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI   D Y + TA+VP+Y  +I+A+ +V+W+ +FT +Q +GINRFV L A+P L F  IS
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           TNN   +NL+  AAD+LQKL+ LA L+ W  L +  SL+W ITLFSLS LPNTL++G+P+
Sbjct: 61  TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
              MYG+ S S M+Q VV Q  IW  +++F+FEYR AR+    +    AA  + S   + 
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPDTAA-NIASIVVDP 180

Query: 181 SVVCVDG 188
            VV +DG
Sbjct: 181 DVVSLDG 186

[Close]

BLAST of Cla007932 vs. TrEMBL
Match: A0A0A0LH32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074260 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 7.7e-85
Identity = 174/250 (69.60%), Postives = 195/250 (78.00%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MIAGKDV +I +AIVPMYFPL IA+ITVRWFNLFT +QSAGI+RFVR LAIPFLCFQVIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           +NNLL INLKLFAADSLQKL+ LAAL LWKLLC NASLDW+ITLFSLS LPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAA---------- 180
           TTAMYGQ SV FMIQT+VFQ+AIW+NVLI LFEYRAAR+  AAE  +             
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGGGECGLVDLN 180

Query: 181 --KEMRSEKTEVSVVCVDGD--------GNEGFPGKEIRPTDGGGGSGHFGLIKEAEKKD 231
             K++  +KTEVSV CVDGD        GN GFP KEI   DG GGS H G+I EAEK++
Sbjct: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKEN 240

[Close]

BLAST of Cla007932 vs. TrEMBL
Match: A0A0K9QE04_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189780 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 94/187 (50.27%), Postives = 135/187 (72.19%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI GKD+YD+F AI+P+Y  +I+A+ +VRW+ +FT +Q +GINRFV + A+P L F  IS
Sbjct: 1   MITGKDIYDVFAAIIPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           TN++ ++N    AAD LQK+V L+ALSLW L+ K  +L+W+ITLFSLS LPNTL++G+P+
Sbjct: 61  TNDIYKMNYHFIAADCLQKVVILSALSLWLLITKKGNLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
             AMYG  S + M+Q VV QS IW  +++FLFEYR A++  A +  + AA  + S + E 
Sbjct: 121 LKAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEYRGAKLLIAEQFPETAA-SITSFRVES 180

Query: 181 SVVCVDG 188
            VV ++G
Sbjct: 181 DVVSLNG 186

[Close]

BLAST of Cla007932 vs. TrEMBL
Match: A0A0K0L6A7_ANACO (Auxin efflux carrier protein OS=Ananas comosus GN=PIN2 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 96/187 (51.34%), Postives = 129/187 (68.98%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI GKD+YD+  AIVP+Y  +I+A+ +VRW+ +FT +Q +GINRFV + A+P L F  IS
Sbjct: 1   MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           TNN   +N +  AADSLQKLV LAALS+W  L    +LDW+ITLFSLS LPNTL++G+P+
Sbjct: 61  TNNPYAMNYQFLAADSLQKLVILAALSVWHNLSSRPTLDWMITLFSLSTLPNTLVVGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
             AMYG  S S M+Q VV QS IW  +++FLFEYR A+   + +     A  + S K E 
Sbjct: 121 LRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDIAGSITSFKVES 180

Query: 181 SVVCVDG 188
            V+ ++G
Sbjct: 181 DVMSLNG 187

[Close]

BLAST of Cla007932 vs. TrEMBL
Match: A5BFN9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032889 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 95/187 (50.80%), Postives = 130/187 (69.52%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI GKD+YD+  AIVP+Y  +I+A+ +VRW+ +FT EQ AGINRFV + A+P L F  IS
Sbjct: 1   MIRGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPEQCAGINRFVAVFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
            N++  +N K  AADSLQK+V L+AL LW+   KN SL+W+ITLFSLS LPNTL++G+P+
Sbjct: 61  LNDIYNMNYKFIAADSLQKIVILSALFLWQAFAKNGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
             AMYG  S S M+Q VV QS IW  +++F+FEYR A++    E     A  + S + E 
Sbjct: 121 LKAMYGDFSASLMVQIVVLQSVIWYTLMLFMFEYRGAKLLI-TEQFPETAGSITSFRVES 180

Query: 181 SVVCVDG 188
            V+ ++G
Sbjct: 181 DVMSLNG 186

[Close]

BLAST of Cla007932 vs. TrEMBL
Match: F6GXI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00440 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 95/187 (50.80%), Postives = 130/187 (69.52%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI GKD+YD+  AIVP+Y  +I+A+ +VRW+ +FT EQ AGINRFV + A+P L F  IS
Sbjct: 1   MIRGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPEQCAGINRFVAVFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
            N++  +N K  AADSLQK+V L+AL LW+   KN SL+W+ITLFSLS LPNTL++G+P+
Sbjct: 61  LNDIYNMNYKFIAADSLQKIVILSALFLWQAFAKNGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
             AMYG  S S M+Q VV QS IW  +++F+FEYR A++    E     A  + S + E 
Sbjct: 121 LKAMYGDFSASLMVQIVVLQSVIWYTLMLFMFEYRGAKLLI-TEQFPETAGSITSFRVES 180

Query: 181 SVVCVDG 188
            V+ ++G
Sbjct: 181 DVMSLNG 186

[Close]

BLAST of Cla007932 vs. NCBI nr
Match: gi|659082635|ref|XP_008441950.1| (PREDICTED: probable auxin efflux carrier component 2 [Cucumis melo])

HSP 1 Score: 331.6 bits (849), Expect = 1.1e-87
Identity = 178/258 (68.99%), Postives = 199/258 (77.13%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MIAGKDV DI +AIVPMYFPL IA++TVRWFNLFT +QSAGI+RFVR LAIPFLCFQVIS
Sbjct: 1   MIAGKDVIDILSAIVPMYFPLTIAYVTVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           +NNLL INLKLFAADSLQKL+ LAAL LWKLL  NASLDW+ITLFSLS LPNTLIIGLPM
Sbjct: 61  SNNLLAINLKLFAADSLQKLISLAALFLWKLLHTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAA---------- 180
           TTAMYGQ SV FMIQT+VFQ+AIW+NVLI LFEYRAAR+  AAE  +             
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGGGECGLVDLN 180

Query: 181 --KEMRSEKTEVSVVCVD--------------GDGNEGFPGKEIRPTDGGGGSGHFGLIK 233
             K++  EKTEVSVVCVD              G+GN GFP KEI P DG GGS H G+I 
Sbjct: 181 GLKQVFPEKTEVSVVCVDGNGEIGSEVDGNGNGNGNGGFPAKEIVPGDGSGGSRHIGVIV 240

[Close]

BLAST of Cla007932 vs. NCBI nr
Match: gi|778674092|ref|XP_011650130.1| (PREDICTED: auxin efflux carrier component 2-like [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 5.0e-85
Identity = 175/252 (69.44%), Postives = 196/252 (77.78%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MIAGKDV +I +AIVPMYFPL IA+ITVRWFNLFT +QSAGI+RFVR LAIPFLCFQVIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           +NNLL INLKLFAADSLQKL+ LAAL LWKLLC NASLDW+ITLFSLS LPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAA---------- 180
           TTAMYGQ SV FMIQT+VFQ+AIW+NVLI LFEYRAAR+  AAE  +             
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGGGECGLVDLN 180

Query: 181 --KEMRSEKTEVSVVCVDGD--------GNEGFPGKEIRPTDGGGGSGHFGLIKEAEKKD 233
             K++  +KTEVSV CVDGD        GN GFP KEI   DG GGS H G+I EAEK++
Sbjct: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKEN 240

[Close]

BLAST of Cla007932 vs. NCBI nr
Match: gi|700206146|gb|KGN61265.1| (hypothetical protein Csa_2G074260 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84
Identity = 174/250 (69.60%), Postives = 195/250 (78.00%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MIAGKDV +I +AIVPMYFPL IA+ITVRWFNLFT +QSAGI+RFVR LAIPFLCFQVIS
Sbjct: 1   MIAGKDVINILSAIVPMYFPLTIAYITVRWFNLFTPDQSAGISRFVRTLAIPFLCFQVIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           +NNLL INLKLFAADSLQKL+ LAAL LWKLLC NASLDW+ITLFSLS LPNTLIIGLPM
Sbjct: 61  SNNLLTINLKLFAADSLQKLISLAALFLWKLLCTNASLDWMITLFSLSSLPNTLIIGLPM 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAA---------- 180
           TTAMYGQ SV FMIQT+VFQ+AIW+NVLI LFEYRAAR+  AAE  +             
Sbjct: 121 TTAMYGQGSVGFMIQTLVFQNAIWINVLIVLFEYRAARMIVAAEEDRRGGGGECGLVDLN 180

Query: 181 --KEMRSEKTEVSVVCVDGD--------GNEGFPGKEIRPTDGGGGSGHFGLIKEAEKKD 231
             K++  +KTEVSV CVDGD        GN GFP KEI   DG GGS H G+I EAEK++
Sbjct: 181 GLKQVFPDKTEVSVGCVDGDGEVGSEGNGNGGFPVKEIVSADGDGGSRHIGVIVEAEKEN 240

[Close]

BLAST of Cla007932 vs. NCBI nr
Match: gi|902151250|gb|KNA05497.1| (hypothetical protein SOVF_189780 [Spinacia oleracea])

HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47
Identity = 94/187 (50.27%), Postives = 135/187 (72.19%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI GKD+YD+F AI+P+Y  +I+A+ +VRW+ +FT +Q +GINRFV + A+P L F  IS
Sbjct: 1   MITGKDIYDVFAAIIPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
           TN++ ++N    AAD LQK+V L+ALSLW L+ K  +L+W+ITLFSLS LPNTL++G+P+
Sbjct: 61  TNDIYKMNYHFIAADCLQKVVILSALSLWLLITKKGNLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
             AMYG  S + M+Q VV QS IW  +++FLFEYR A++  A +  + AA  + S + E 
Sbjct: 121 LKAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEYRGAKLLIAEQFPETAA-SITSFRVES 180

Query: 181 SVVCVDG 188
            VV ++G
Sbjct: 181 DVVSLNG 186

[Close]

BLAST of Cla007932 vs. NCBI nr
Match: gi|147783579|emb|CAN70111.1| (hypothetical protein VITISV_032889 [Vitis vinifera])

HSP 1 Score: 197.6 bits (501), Expect = 2.4e-47
Identity = 95/187 (50.80%), Postives = 130/187 (69.52%), Query Frame = 1


Query: 1   MIAGKDVYDIFTAIVPMYFPLIIAFITVRWFNLFTAEQSAGINRFVRLLAIPFLCFQVIS 60
           MI GKD+YD+  AIVP+Y  +I+A+ +VRW+ +FT EQ AGINRFV + A+P L F  IS
Sbjct: 1   MIRGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPEQCAGINRFVAVFAVPLLSFHFIS 60

Query: 61  TNNLLQINLKLFAADSLQKLVFLAALSLWKLLCKNASLDWVITLFSLSCLPNTLIIGLPM 120
            N++  +N K  AADSLQK+V L+AL LW+   KN SL+W+ITLFSLS LPNTL++G+P+
Sbjct: 61  LNDIYNMNYKFIAADSLQKIVILSALFLWQAFAKNGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 TTAMYGQASVSFMIQTVVFQSAIWVNVLIFLFEYRAARIFFAAESSKFAAKEMRSEKTEV 180
             AMYG  S S M+Q VV QS IW  +++F+FEYR A++    E     A  + S + E 
Sbjct: 121 LKAMYGDFSASLMVQIVVLQSVIWYTLMLFMFEYRGAKLLI-TEQFPETAGSITSFRVES 180

Query: 181 SVVCVDG 188
            V+ ++G
Sbjct: 181 DVMSLNG 186

The following BLAST results are available for this feature:

BLAST of Cla007932 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIN2_ORYSJ	9.2e-47	42.98	Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN...	[more]
PIN1C_ORYSJ	3.5e-46	49.20	Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PI...	[more]
PIN2_ARATH	3.0e-45	47.06	Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2	[more]
PIN3_ARATH	1.5e-44	46.52	Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1	[more]
PIN1_ORYSJ	1.9e-44	47.59	Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV...	[more]

BLAST of Cla007932 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH32_CUCSA	7.7e-85	69.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074260 PE=4 SV=1	[more]
A0A0K9QE04_SPIOL	1.3e-47	50.27	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189780 PE=4 SV=1	[more]
A0A0K0L6A7_ANACO	1.7e-47	51.34	Auxin efflux carrier protein OS=Ananas comosus GN=PIN2 PE=2 SV=1	[more]
A5BFN9_VITVI	1.7e-47	50.80	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032889 PE=4 SV=1	[more]
F6GXI9_VITVI	1.7e-47	50.80	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00440 PE=4 SV=...	[more]

BLAST of Cla007932 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082635\|ref\|XP_008441950.1\|	1.1e-87	68.99	PREDICTED: probable auxin efflux carrier component 2 [Cucumis melo]	[more]
gi\|778674092\|ref\|XP_011650130.1\|	5.0e-85	69.44	PREDICTED: auxin efflux carrier component 2-like [Cucumis sativus]	[more]
gi\|700206146\|gb\|KGN61265.1\|	1.1e-84	69.60	hypothetical protein Csa_2G074260 [Cucumis sativus]	[more]
gi\|902151250\|gb\|KNA05497.1\|	1.9e-47	50.27	hypothetical protein SOVF_189780 [Spinacia oleracea]	[more]
gi\|147783579\|emb\|CAN70111.1\|	2.4e-47	50.80	hypothetical protein VITISV_032889 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004776	Mem_trans

Vocabulary: **Biological Process**
Term	Definition
GO:0010315	auxin efflux
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0010329	auxin efflux transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010315	auxin efflux
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0048513	animal organ development
biological_process	GO:0060918	auxin transport
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0009733	response to auxin
biological_process	GO:0009605	response to external stimulus
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0010329	auxin efflux transmembrane transporter activity
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla007932	Cla007932	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla007932	Cla007932.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla007932.1.cds1	Cla007932.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 10..188 score: 9.2
None	No IPR available	PANTHER	PTHR31752	FAMILY NOT NAMED	coord: 2..162 score: 1.4