Cla007925.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGACGCTGTTATGCTGCCGAAATTTTTCTAAAGTATTAAGAGATAGTAAAGTTAGTTACAGGTTAAATTTTGGTAATATTCTCTAGTTTAGTATTAAAATTTGGGGGTGTTACAGCTAACCAACTTCGCTATTTCGGCAGGCGAGACTCTCGCTACATTTTCTCTGTTGTCAACTCTCCCTCTTTTTGGTCTCTGAGCAAAACTATTGCTTCAGCGCCCACTCCAGGTTTGTTTCTTGCTTTCTTCAATGCATGTTTGGGGGTAGTTTTCCTCAAATTTTGGGTTTGCTATGTTGATTCAAAACGAATTTTACTTTCTGGAAGTTGGGATGATCTGTTTCATAAAGATTTAGTGTCTTTTTATGTAAATAAATTGAATAAGTGCATATGAGCTGAGATATAATATTTTTTCCGGAAAACAGAAACTCCCATTAACGAGAGGGAGAGAAAGAGATTGTTCTCTCTATCATCTGCTTCAGGAATGGACATTAGTCCAATCTGTGCATTGGTTTTGAGTGGGAAAACAGCAGCTGAGAACGAAACTGCCAAATTGCTGAAGAGGAATGACACTTTGAAGCTCCCTGATGATACTGAAATTTCAGTTTTATTGCACTCAGAAAGGGATAAACCTTTGGAGGGAAATGAGTTTCGAATTGATTTGTATCTGAATGCTCTATCTACTGATACTTTTGGTAGATTTCTGATTTGGTCTCCACGAATTCCTTCTACTCAGGATGTTATTTCTCAGTATGTATAATAAAACATTTTTTTTTCTCCCACACTACATTTTCATTCGTTGGAGAGTCGGCTAACTATTAGTTTGCAACAGCAACTTTAGCAACCTTCCACTGGGTGCTGTTTGTGTGGCTGATGTTCAGTTCAAGGGAAGAGGTGCGTAGTCCTGATAGGAACAACAAACTGGTAACATTGTTTGTTAGTCTTGGAATTCCTCTTTCTATTGAAAGTCACTATGTGGATTTAAGTGAAGGTCGATCAAAGAATTTGTGGGAATCTCCCCCTGGTTGCCTTATGTTTTCCTTTACCATTCAAATGGAAGATGGGCGTATTGTTCCTCTATTACAGTATGTAATATCTCTCGCTATGACTGAGGCCATAAAAGATATTTCCAACGAAGAGGTAATTTTTGTCTTGTTTTGGTCCATATTAGCAACTCTCAATTGAAATCTTTGTTAAAAGATGGTAACTCTATTATAACAAATCTCTTAGATGAAAATTATGATCAACAACTAATGTTAATTTATCAATGGAGATTTCTTTTTTTTTTTTAACAAACAAAGAGAACGAGTGATGTTATTTTAATACCAGATAATTGTCTCCTAAGAAGCACATACACTTTAGTTTGGCAAGTGTGTCCGTGTCCATCACATGTCGGACACTTGGACGCTCCAACATTTGTTAGATACATATCACACACTTGTTAGTGCAACAAATGTGTAAACATGCATAGAACACTTGTTGAGTAGACTAAAAGATAGATATATGACAATAATAATAACTTTTGAGGGTGAAGTACATCAAGCTAAGTTTTTTAAGCATATAAATGCATCAACCCATTTACTTTTAATTTTCTCTTGGTATAAAAATGATATATAGTTTATAAAATGTATATTTTAATAAATGTGTCTTTGTTGTGTCATGTCCTAGATTTTTGAAATATGGTGTGTTGTCGTTGTGTCGTGTTTGTGTCTTTTATTCGTATTTAGGCTTCTTAGGTTGTCTCAATGCCAGCTAAGTAACCAACACTTTAGGAGAGGCGGGTGAGAAGTAGTGAGCTTGCAAGAGAAAAACATATGGTAATGGAAGGAGGAAATAATATGTTGGAAAGAATCTGGACGGACTTGAGGAATAGATAGGGTTTCAAGTCATGGTAGACTTCTATGGAGATGATTAAATGCTCTCGTATGTTTGTTATTTCAACTGTGCCAGTGTCATTGACTATCCCATTCATGTTAGGAGTCTTATCTGTAAATGGTCGTGCACTTGAGTTAAGGTTGATACTGCTCATTCTCTGTGGGTTCCTACAGGGGTTACCCTATATTGATTTGAAAATAAAGTGGCCAAATGATCTTTATGTGAATGACCTGAAAGTTGGAGGCATTCTATGTACTTCAACATATAGATCGAAGAAGTTCAACGTTACTGCTGGTGTGTTGTTTTTTCCATCTAATTTTCTTCTACATTCTTTTTTCCCCTTCCAATTTAAAACTTTTGGTCTCCATACCTTGCACCAATTTGAAAAACCTAGTGTGGTTGTGATTTATTTTAACTGCTTCATGTTCTTCCAGGTATAGGTTTGAATGTAGACAACGACGAACCATCAACATGCTTGAATGAAGCTCTTTCAAATTTATCCAGTACACCTTACAAGTTCAGAAAAGAGGATATTTTAGCATTCTTCTTTAACAAATTTGAAAGATTGTATGATGTTTTCATAAATCAAGGTATTTATATAACAATTTAATGCCTTTCTCATGATAAGTCAATAAGACATTGTCACATACATGCACGAATTTAGAGCTTCTTCAATCCAACCTCACCAATGCTTTGGAGATGGTTGTCAATTATGAAAATTTAAGCAGCTAACACCATTTGCTAAAATAATTTGCAACTGTCCATCTTTCTCTTCTTTTTTCCCTTGTTTCTGAACATGTAATTATGAACATCATTCTAACACCATCTGCCATAAGGTTTTGTGCATGCTAAGGGTTTGTTCATTAATTAGGTGGATTAATGATTTTATTTTATTCATTCTTTTTGGTCATTCTCCTATATAAAAAGGTAATGTATCTTACTATTGGAATCGTTGGAATACAAATATATTATTCCATTCAATTTAGATGATATATGAGTAGGATGTCCTGTGTTCAAATACTAGTAATATCATTTCCTCACCAATTGATATTGATTTCTACTTGTTAAGCTTTCTACAAATTTTCAAGCCTACAAGCGAGTGAAGTGTTAAAGGTAATTTTTCAGTGTCTTGTTTTAGCTGGCTCATAATGAGATGAGTTATGGGAGAATACGGTCCTCATAGGTCTGAAGGAAGAAGAGCTTTTTGGAATGAGTTGGGAGTTTGTTTGGTCTTTTGTGGTTCCCAATGGTGTGTGGCTGGAGACCCATTTCTGA ATGTTGACGCTGTTATGCTGCCGAAATTTTTCTAAAGTATTAAGAGATAGTAAAGTTAGTTACAGGCGAGACTCTCGCTACATTTTCTCTGTTGTCAACTCTCCCTCTTTTTGGTCTCTGAGCAAAACTATTGCTTCAGCGCCCACTCCAGAAACTCCCATTAACGAGAGGGAGAGAAAGAGATTGTTCTCTCTATCATCTGCTTCAGGAATGGACATTAGTCCAATCTGTGCATTGGTTTTGAGTGGGAAAACAGCAGCTGAGAACGAAACTGCCAAATTGCTGAAGAGGAATGACACTTTGAAGCTCCCTGATGATACTGAAATTTCAGTTTTATTGCACTCAGAAAGGGATAAACCTTTGGAGGGAAATGAGTTTCGAATTGATTTGTATCTGAATGCTCTATCTACTGATACTTTTGGTAGATTTCTGATTTGGTCTCCACGAATTCCTTCTACTCAGGATGTTATTTCTCATTCAAGGGAAGAGGTGCGTAGTCCTGATAGGAACAACAAACTGGTAACATTGTTTGTTAGTCTTGGAATTCCTCTTTCTATTGAAAGTCACTATGTGGATTTAAGTGAAGGTCGATCAAAGAATTTGTGGGAATCTCCCCCTGGTTGCCTTATGTTTTCCTTTACCATTCAAATGGAAGATGGGCGTATTGTTCCTCTATTACAGTATGTAATATCTCTCGCTATGACTGAGGCCATAAAAGATATTTCCAACGAAGAGGGGTTACCCTATATTGATTTGAAAATAAAGTGGCCAAATGATCTTTATGTGAATGACCTGAAAGTTGGAGGCATTCTATGTACTTCAACATATAGATCGAAGAAGTTCAACGTTACTGCTGGTATAGGTTTGAATGTAGACAACGACGAACCATCAACATGCTTGAATGAAGCTCTTTCAAATTTATCCAGTACACCTTACAAGTTCAGAAAAGAGGATATTTTAGCATTCTTCTTTAACAAATTTGAAAGATTGTATGATGTTTTCATAAATCAAGGTCTGAAGGAAGAAGAGCTTTTTGGAATGAGTTGGGAGTTTGTTTGGTCTTTTGTGGTTCCCAATGGTGTGTGGCTGGAGACCCATTTCTGA ATGTTGACGCTGTTATGCTGCCGAAATTTTTCTAAAGTATTAAGAGATAGTAAAGTTAGTTACAGGCGAGACTCTCGCTACATTTTCTCTGTTGTCAACTCTCCCTCTTTTTGGTCTCTGAGCAAAACTATTGCTTCAGCGCCCACTCCAGAAACTCCCATTAACGAGAGGGAGAGAAAGAGATTGTTCTCTCTATCATCTGCTTCAGGAATGGACATTAGTCCAATCTGTGCATTGGTTTTGAGTGGGAAAACAGCAGCTGAGAACGAAACTGCCAAATTGCTGAAGAGGAATGACACTTTGAAGCTCCCTGATGATACTGAAATTTCAGTTTTATTGCACTCAGAAAGGGATAAACCTTTGGAGGGAAATGAGTTTCGAATTGATTTGTATCTGAATGCTCTATCTACTGATACTTTTGGTAGATTTCTGATTTGGTCTCCACGAATTCCTTCTACTCAGGATGTTATTTCTCATTCAAGGGAAGAGGTGCGTAGTCCTGATAGGAACAACAAACTGGTAACATTGTTTGTTAGTCTTGGAATTCCTCTTTCTATTGAAAGTCACTATGTGGATTTAAGTGAAGGTCGATCAAAGAATTTGTGGGAATCTCCCCCTGGTTGCCTTATGTTTTCCTTTACCATTCAAATGGAAGATGGGCGTATTGTTCCTCTATTACAGTATGTAATATCTCTCGCTATGACTGAGGCCATAAAAGATATTTCCAACGAAGAGGGGTTACCCTATATTGATTTGAAAATAAAGTGGCCAAATGATCTTTATGTGAATGACCTGAAAGTTGGAGGCATTCTATGTACTTCAACATATAGATCGAAGAAGTTCAACGTTACTGCTGGTATAGGTTTGAATGTAGACAACGACGAACCATCAACATGCTTGAATGAAGCTCTTTCAAATTTATCCAGTACACCTTACAAGTTCAGAAAAGAGGATATTTTAGCATTCTTCTTTAACAAATTTGAAAGATTGTATGATGTTTTCATAAATCAAGGTCTGAAGGAAGAAGAGCTTTTTGGAATGAGTTGGGAGTTTGTTTGGTCTTTTGTGGTTCCCAATGGTGTGTGGCTGGAGACCCATTTCTGA MLTLLCCRNFSKVLRDSKVSYRRDSRYIFSVVNSPSFWSLSKTIASAPTPETPINERERKRLFSLSSASGMDISPICALVLSGKTAAENETAKLLKRNDTLKLPDDTEISVLLHSERDKPLEGNEFRIDLYLNALSTDTFGRFLIWSPRIPSTQDVISHSREEVRSPDRNNKLVTLFVSLGIPLSIESHYVDLSEGRSKNLWESPPGCLMFSFTIQMEDGRIVPLLQYVISLAMTEAIKDISNEEGLPYIDLKIKWPNDLYVNDLKVGGILCTSTYRSKKFNVTAGIGLNVDNDEPSTCLNEALSNLSSTPYKFRKEDILAFFFNKFERLYDVFINQGLKEEELFGMSWEFVWSFVVPNGVWLETHF
BLAST of Cla007925 vs. Swiss-Prot
Match: HCS1_ARATH (Biotin--protein ligase 1, chloroplastic OS=Arabidopsis thaliana GN=HCS1 PE=1 SV=2) HSP 1 Score: 305.8 bits (782), Expect = 6.2e-82 Identity = 154/299 (51.51%), Postives = 207/299 (69.23%), Query Frame = 1
BLAST of Cla007925 vs. Swiss-Prot
Match: HCS2_ARATH (Biotin--protein ligase 2 OS=Arabidopsis thaliana GN=HCS2 PE=2 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.3e-76 Identity = 143/282 (50.71%), Postives = 199/282 (70.57%), Query Frame = 1
BLAST of Cla007925 vs. Swiss-Prot
Match: BPL1_SCHPO (Biotin--protein ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bpl1 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.5e-19 Identity = 77/256 (30.08%), Postives = 121/256 (47.27%), Query Frame = 1
BLAST of Cla007925 vs. Swiss-Prot
Match: BPL1_HUMAN (Biotin--protein ligase OS=Homo sapiens GN=HLCS PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-18 Identity = 59/222 (26.58%), Postives = 112/222 (50.45%), Query Frame = 1
BLAST of Cla007925 vs. Swiss-Prot
Match: BPL1_MOUSE (Biotin--protein ligase OS=Mus musculus GN=Hlcs PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.7e-18 Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = 1
BLAST of Cla007925 vs. TrEMBL
Match: A0A0A0LBN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G455650 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 5.0e-139 Identity = 254/318 (79.87%), Postives = 273/318 (85.85%), Query Frame = 1
BLAST of Cla007925 vs. TrEMBL
Match: M5XAL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007504mg PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 3.3e-90 Identity = 167/284 (58.80%), Postives = 216/284 (76.06%), Query Frame = 1
BLAST of Cla007925 vs. TrEMBL
Match: A0A059BY35_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03750 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 5.0e-86 Identity = 170/311 (54.66%), Postives = 215/311 (69.13%), Query Frame = 1
BLAST of Cla007925 vs. TrEMBL
Match: A0A067GQ04_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0175182mg PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.2e-84 Identity = 167/305 (54.75%), Postives = 215/305 (70.49%), Query Frame = 1
BLAST of Cla007925 vs. TrEMBL
Match: A0A067KKH3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12047 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.6e-84 Identity = 166/293 (56.66%), Postives = 212/293 (72.35%), Query Frame = 1
BLAST of Cla007925 vs. NCBI nr
Match: gi|778681319|ref|XP_004150602.2| (PREDICTED: biotin--protein ligase 2-like [Cucumis sativus]) HSP 1 Score: 507.3 bits (1305), Expect = 2.3e-140 Identity = 258/329 (78.42%), Postives = 279/329 (84.80%), Query Frame = 1
BLAST of Cla007925 vs. NCBI nr
Match: gi|659093441|ref|XP_008447538.1| (PREDICTED: biotin--protein ligase 2-like isoform X1 [Cucumis melo]) HSP 1 Score: 506.9 bits (1304), Expect = 2.9e-140 Identity = 257/329 (78.12%), Postives = 281/329 (85.41%), Query Frame = 1
BLAST of Cla007925 vs. NCBI nr
Match: gi|659093443|ref|XP_008447539.1| (PREDICTED: biotin--protein ligase 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 506.9 bits (1304), Expect = 2.9e-140 Identity = 257/329 (78.12%), Postives = 281/329 (85.41%), Query Frame = 1
BLAST of Cla007925 vs. NCBI nr
Match: gi|659093445|ref|XP_008447540.1| (PREDICTED: biotin--protein ligase 2-like isoform X3 [Cucumis melo]) HSP 1 Score: 506.9 bits (1304), Expect = 2.9e-140 Identity = 257/329 (78.12%), Postives = 281/329 (85.41%), Query Frame = 1
BLAST of Cla007925 vs. NCBI nr
Match: gi|700202909|gb|KGN58042.1| (hypothetical protein Csa_3G455650 [Cucumis sativus]) HSP 1 Score: 502.3 bits (1292), Expect = 7.2e-139 Identity = 254/318 (79.87%), Postives = 273/318 (85.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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