Cla007914.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007914
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Endoribonuclease L-PSP family protein-like (AHRD V1 ***- Q6K987_ORYSJ); contains Interpro domain(s) IPR013813 Endoribonuclease L-PSP/chorismate mutase-like
Location	Chr11 : 9307298 .. 9308129 (+)
Sequence length	726

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGGATTGTGCTTGACGAATTCAAAGTTGTGATGCACTCATCAGATTCCATAGCACCAGTGGGGATCCTTCATCCTGTTTCCTTCCATTTGAAGTATAAGGAAAAAACCTCTTCTCTTGGTATATGTGACAACACCAATTTAGTTGACCATGAGAAAGTGGGTCTTCTATTTGAAATTCAAGGAGATTGCTTTCAAAATTGCGATGCATTACAATCGGTTGCTGATGCCTCTAGTGACAATCATATACTTAATGATGTTCCAGATAATAGGCTTCAAATTTCATGTTCAAGGATGGAGAATACATTTTCGATGTGTTGCTGGTTGCAAGATTCATGCGATACTTCTCCAGGTTGATTAAAGATACTCAGTTTTAAAGTATAAACTGTCATATTTACATTTCAAAATTTTAGCCTATATTTATTGTGATTTATCATGGTCAAGTCGTTGGTTGGCAGGTCTGCAGGATGATCTGAAGACTGTTCTTAGGGAAGTAGAATCAGAGCTTCTAGCACGTGGTTGTGGATGGAAAAATGTGCTCTATATTCATCTCTATCTTGCTAATATGACTGAGTTTGCTTTGGCTAACGAAACATATGTCAGTTTTATAACACAGGAGAAGTGTCCTTTTGGTGTTCCATCACGCAGTACAATTGAATTGCCTTTACAGCAAGTGAGATTGGGAAATGCATATATTGAAGTTCTGGTGGCAAATGACCAAACGAAAAGAGTTCTTCATGTGCAGAGTATATCATCTTGGGCACCTAGTTGCATTGGACCATATAGCCAGGTAAAAATTCCTCTCTTTCATAACGTAATGCATCTTTAA

mRNA sequence

ATGGCTAGGATTGTGCTTGACGAATTCAAAGTTGTGATGCACTCATCAGATTCCATAGCACCAGTGGGGATCCTTCATCCTGTTTCCTTCCATTTGAAGTATAAGGAAAAAACCTCTTCTCTTGGTATATGTGACAACACCAATTTAGTTGACCATGAGAAAGTGGGTCTTCTATTTGAAATTCAAGGAGATTGCTTTCAAAATTGCGATGCATTACAATCGGTTGCTGATGCCTCTAGTGACAATCATATACTTAATGATGTTCCAGATAATAGGCTTCAAATTTCATGTTCAAGGATGGAGAATACATTTTCGATGTGTTGCTGGTTGCAAGATTCATGCGATACTTCTCCAGGTCTGCAGGATGATCTGAAGACTGTTCTTAGGGAAGTAGAATCAGAGCTTCTAGCACGTGGTTGTGGATGGAAAAATGTGCTCTATATTCATCTCTATCTTGCTAATATGACTGAGTTTGCTTTGGCTAACGAAACATATGTCAGTTTTATAACACAGGAGAAGTGTCCTTTTGGTGTTCCATCACGCAGTACAATTGAATTGCCTTTACAGCAAGTGAGATTGGGAAATGCATATATTGAAGTTCTGGTGGCAAATGACCAAACGAAAAGAGTTCTTCATGTGCAGAGTATATCATCTTGGGCACCTAGTTGCATTGGACCATATAGCCAGGTAAAAATTCCTCTCTTTCATAACGTAATGCATCTTTAA

Coding sequence (CDS)

ATGGCTAGGATTGTGCTTGACGAATTCAAAGTTGTGATGCACTCATCAGATTCCATAGCACCAGTGGGGATCCTTCATCCTGTTTCCTTCCATTTGAAGTATAAGGAAAAAACCTCTTCTCTTGGTATATGTGACAACACCAATTTAGTTGACCATGAGAAAGTGGGTCTTCTATTTGAAATTCAAGGAGATTGCTTTCAAAATTGCGATGCATTACAATCGGTTGCTGATGCCTCTAGTGACAATCATATACTTAATGATGTTCCAGATAATAGGCTTCAAATTTCATGTTCAAGGATGGAGAATACATTTTCGATGTGTTGCTGGTTGCAAGATTCATGCGATACTTCTCCAGGTCTGCAGGATGATCTGAAGACTGTTCTTAGGGAAGTAGAATCAGAGCTTCTAGCACGTGGTTGTGGATGGAAAAATGTGCTCTATATTCATCTCTATCTTGCTAATATGACTGAGTTTGCTTTGGCTAACGAAACATATGTCAGTTTTATAACACAGGAGAAGTGTCCTTTTGGTGTTCCATCACGCAGTACAATTGAATTGCCTTTACAGCAAGTGAGATTGGGAAATGCATATATTGAAGTTCTGGTGGCAAATGACCAAACGAAAAGAGTTCTTCATGTGCAGAGTATATCATCTTGGGCACCTAGTTGCATTGGACCATATAGCCAGGTAAAAATTCCTCTCTTTCATAACGTAATGCATCTTTAA

Protein sequence

MARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLGICDNTNLVDHEKVGLLFEIQGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGLQDDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPSRSTIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKIPLFHNVMHL

Homology

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BLAST of Cla007914 vs. Swiss-Prot
Match: DPH6_SCHPO (Diphthine--ammonia ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug71 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 58/228 (25.44%), Postives = 99/228 (43.42%), Query Frame = 1


Query: 3   RIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLGICDNTNLVDHEKVGLLFEIQ 62
           RIVL + +VV HSS  +  + +   V      K+K     I   + LV +E+  LL E  
Sbjct: 215 RIVLTDKEVVEHSSGEVCYLKVKACV------KDKPEWQPISLKSELVPNEE--LLGEEY 274

Query: 63  GDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGLQD 122
              +        + D   +    + +P    + +  + + +F +   +  +  +    Q 
Sbjct: 275 SHIYHTISKKYELIDDQEETPT-SLIPIPLRESAFQQKKGSFLVLGNVVATKGSYNTFQG 334

Query: 123 DLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPSRS 182
           + ++ +  +   L   G   KNV ++ + L++M++FA  N  Y  +          PSRS
Sbjct: 335 EAESAINNLNELLGTYGYSNKNVYFVTVILSSMSKFAEFNSVYNKYFDFTN----PPSRS 394

Query: 183 TIELPL-QQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQ 230
            +  PL  + R+    +  +V +   KR LHVQ  S WAP+ IGPYSQ
Sbjct: 395 CVAAPLASEYRI---VMSCIVGDVTEKRALHVQGQSYWAPANIGPYSQ 426

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BLAST of Cla007914 vs. TrEMBL
Match: A0A0A0LKJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075360 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 6.7e-116
Identity = 206/232 (88.79%), Postives = 220/232 (94.83%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLG-ICDNTNLVDHEKVGLLFE 61
           ARIVLD+F+VVMHSSDSIAPVGILHPVSFHLKYK KTSSLG ICDNTNLVDHEK GLLFE
Sbjct: 217 ARIVLDKFEVVMHSSDSIAPVGILHPVSFHLKYKAKTSSLGSICDNTNLVDHEKGGLLFE 276

Query: 62  IQGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGL 121
           IQGDCFQNCD LQSVAD SSDNHIL++VPD+RLQISCSRM+NTF +CCWLQ+SC TSPGL
Sbjct: 277 IQGDCFQNCDILQSVADVSSDNHILDEVPDDRLQISCSRMQNTFLICCWLQNSCGTSPGL 336

Query: 122 QDDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPS 181
           QDDLKTVLR++ESELLARGCGWKNVLYIHLYLA+M  F LANETYVSFITQEKCPFGVPS
Sbjct: 337 QDDLKTVLRKIESELLARGCGWKNVLYIHLYLADMNGFGLANETYVSFITQEKCPFGVPS 396

Query: 182 RSTIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKI 233
           RST+ELPLQQV+LGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQ  +
Sbjct: 397 RSTVELPLQQVQLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQATL 448

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BLAST of Cla007914 vs. TrEMBL
Match: F6H602_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00850 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.6e-79
Identity = 151/240 (62.92%), Postives = 186/240 (77.50%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLGICDNTNLVDHEKVGLLFEI 61
           ARIVLDEF+VV+HSSDSIAPVGILHP++FHL+ K ++ SL   + TN    EK+  + E+
Sbjct: 251 ARIVLDEFQVVLHSSDSIAPVGILHPLAFHLENKVESISLSATNGTNDACLEKIDSVCEV 310

Query: 62  QGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGLQ 121
           QGDC + C A     DA+SD   L+DV ++RL IS +R +N FSMCCWLQDS  TS GLQ
Sbjct: 311 QGDCLRRCAAKGESVDAASD---LDDVIEHRLLISKTRKDNLFSMCCWLQDSSKTSSGLQ 370

Query: 122 DDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPSR 181
           +D+K VL+++ES+L+  G GW+NVLYIHLY+++M EFALANE YV +ITQEKCP GVPSR
Sbjct: 371 EDMKAVLKKIESQLMEYGFGWENVLYIHLYISDMNEFALANEIYVKYITQEKCPLGVPSR 430

Query: 182 STIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKIPLFHNVMHL 241
           STIELPL QV LG AY+EVLV  DQ+KRVLHVQSIS WAPSCIGPYSQ    L   ++H+
Sbjct: 431 STIELPLLQVGLGGAYVEVLVTTDQSKRVLHVQSISCWAPSCIGPYSQA--TLHKGILHM 485

[Close]

BLAST of Cla007914 vs. TrEMBL
Match: A5C6M1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044131 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.6e-79
Identity = 151/240 (62.92%), Postives = 186/240 (77.50%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLGICDNTNLVDHEKVGLLFEI 61
           ARIVLDEF+VV+HSSDSIAPVGILHP++FHL+ K ++ SL   + TN    EK+  + E+
Sbjct: 54  ARIVLDEFQVVLHSSDSIAPVGILHPLAFHLENKVESISLSATNGTNDACLEKIDSVCEV 113

Query: 62  QGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGLQ 121
           QGDC + C A     DA+SD   L+DV ++RL IS +R +N FSMCCWLQDS  TS GLQ
Sbjct: 114 QGDCLRRCAAKGESVDAASD---LDDVIEHRLLISKTRKDNLFSMCCWLQDSSKTSSGLQ 173

Query: 122 DDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPSR 181
           +D+K VL+++ES+L+  G GW+NVLYIHLY+++M EFALANE YV +ITQEKCP GVPSR
Sbjct: 174 EDMKAVLKKIESQLMEYGFGWENVLYIHLYISDMNEFALANEIYVKYITQEKCPLGVPSR 233

Query: 182 STIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKIPLFHNVMHL 241
           STIELPL QV LG AY+EVLV  DQ+KRVLHVQSIS WAPSCIGPYSQ    L   ++H+
Sbjct: 234 STIELPLLQVGLGRAYVEVLVTTDQSKRVLHVQSISCWAPSCIGPYSQA--TLHKGILHM 288

[Close]

BLAST of Cla007914 vs. TrEMBL
Match: V4T6J7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019185mg PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.8e-75
Identity = 144/231 (62.34%), Postives = 181/231 (78.35%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLGICDNTNLVDHEKVGLLFEI 61
           ARIVLDEF+VV+HS+DSIAPVG+LHP++FHL+YK  ++SL     T     EK GL+FE+
Sbjct: 142 ARIVLDEFQVVLHSADSIAPVGVLHPLAFHLEYKAGSASLSGRRETENSIQEKTGLVFEV 201

Query: 62  QGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGLQ 121
           QG+C QN +A+       +D+    +V DNRL IS ++ +NTFS+CCWLQ++  TS GL 
Sbjct: 202 QGECPQNSEAMCLPVAEVTDSV---EVTDNRLNISRTKKDNTFSICCWLQETQKTSAGLL 261

Query: 122 DDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPSR 181
           DDL+ VL+++ES+L+  G  W +VLYIHLY+++M EFA+ANETYV FIT EKCP GVPSR
Sbjct: 262 DDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSR 321

Query: 182 STIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKI 233
           STIELPL +V LG AYIEVLVANDQ+KRVLHVQSIS WAPSCIGPYSQ  +
Sbjct: 322 STIELPLLEVGLGKAYIEVLVANDQSKRVLHVQSISCWAPSCIGPYSQATL 369

[Close]

BLAST of Cla007914 vs. TrEMBL
Match: A0A067DRF0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004613mg PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.8e-75
Identity = 144/231 (62.34%), Postives = 180/231 (77.92%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLGICDNTNLVDHEKVGLLFEI 61
           ARIVLDEF+VV+HS+DSIAPVG+LHP++FHL+YK  ++SL     T     EK GL+FE+
Sbjct: 142 ARIVLDEFQVVLHSADSIAPVGVLHPLAFHLEYKAGSASLSGSRETENSIQEKTGLVFEV 201

Query: 62  QGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGLQ 121
           QG+C QN +A+       +D+    +V DNRL IS  + +NTFS+CCWLQ++  TS GL 
Sbjct: 202 QGECPQNSEAMCLPVAEVTDSV---EVTDNRLNISRRKKDNTFSICCWLQETQKTSAGLL 261

Query: 122 DDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPSR 181
           DDL+ VL+++ES+L+  G  W +VLYIHLY+++M EFA+ANETYV FIT EKCP GVPSR
Sbjct: 262 DDLRVVLKQIESKLVRYGFDWGHVLYIHLYISDMNEFAVANETYVKFITHEKCPCGVPSR 321

Query: 182 STIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKI 233
           STIELPL +V LG AYIEVLVANDQ+KRVLHVQSIS WAPSCIGPYSQ  +
Sbjct: 322 STIELPLLEVGLGKAYIEVLVANDQSKRVLHVQSISCWAPSCIGPYSQATL 369

[Close]

BLAST of Cla007914 vs. NCBI nr
Match: gi|778667915|ref|XP_004152819.2| (PREDICTED: diphthine--ammonia ligase isoform X1 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 9.6e-116
Identity = 206/232 (88.79%), Postives = 220/232 (94.83%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLG-ICDNTNLVDHEKVGLLFE 61
           ARIVLD+F+VVMHSSDSIAPVGILHPVSFHLKYK KTSSLG ICDNTNLVDHEK GLLFE
Sbjct: 217 ARIVLDKFEVVMHSSDSIAPVGILHPVSFHLKYKAKTSSLGSICDNTNLVDHEKGGLLFE 276

Query: 62  IQGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGL 121
           IQGDCFQNCD LQSVAD SSDNHIL++VPD+RLQISCSRM+NTF +CCWLQ+SC TSPGL
Sbjct: 277 IQGDCFQNCDILQSVADVSSDNHILDEVPDDRLQISCSRMQNTFLICCWLQNSCGTSPGL 336

Query: 122 QDDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPS 181
           QDDLKTVLR++ESELLARGCGWKNVLYIHLYLA+M  F LANETYVSFITQEKCPFGVPS
Sbjct: 337 QDDLKTVLRKIESELLARGCGWKNVLYIHLYLADMNGFGLANETYVSFITQEKCPFGVPS 396

Query: 182 RSTIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKI 233
           RST+ELPLQQV+LGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQ  +
Sbjct: 397 RSTVELPLQQVQLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQATL 448

[Close]

BLAST of Cla007914 vs. NCBI nr
Match: gi|778667923|ref|XP_011649009.1| (PREDICTED: diphthine--ammonia ligase isoform X3 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 9.6e-116
Identity = 206/232 (88.79%), Postives = 220/232 (94.83%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLG-ICDNTNLVDHEKVGLLFE 61
           ARIVLD+F+VVMHSSDSIAPVGILHPVSFHLKYK KTSSLG ICDNTNLVDHEK GLLFE
Sbjct: 170 ARIVLDKFEVVMHSSDSIAPVGILHPVSFHLKYKAKTSSLGSICDNTNLVDHEKGGLLFE 229

Query: 62  IQGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGL 121
           IQGDCFQNCD LQSVAD SSDNHIL++VPD+RLQISCSRM+NTF +CCWLQ+SC TSPGL
Sbjct: 230 IQGDCFQNCDILQSVADVSSDNHILDEVPDDRLQISCSRMQNTFLICCWLQNSCGTSPGL 289

Query: 122 QDDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPS 181
           QDDLKTVLR++ESELLARGCGWKNVLYIHLYLA+M  F LANETYVSFITQEKCPFGVPS
Sbjct: 290 QDDLKTVLRKIESELLARGCGWKNVLYIHLYLADMNGFGLANETYVSFITQEKCPFGVPS 349

Query: 182 RSTIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKI 233
           RST+ELPLQQV+LGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQ  +
Sbjct: 350 RSTVELPLQQVQLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQATL 401

[Close]

BLAST of Cla007914 vs. NCBI nr
Match: gi|659082418|ref|XP_008441829.1| (PREDICTED: diphthine--ammonia ligase isoform X1 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.4e-113
Identity = 203/232 (87.50%), Postives = 217/232 (93.53%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLG-ICDNTNLVDHEKVGLLFE 61
           ARIVLDEFKVVMHSSDSIAPVGILHPVSFHL+YK KTSSLG ICDN NLVD EK GLLFE
Sbjct: 217 ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLQYKAKTSSLGSICDNKNLVDQEKGGLLFE 276

Query: 62  IQGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGL 121
           IQGDCFQNCD LQSVAD SSD+HIL+DVPD+RLQISCSRM+ TF +CCWLQ+SC TSPGL
Sbjct: 277 IQGDCFQNCDILQSVADVSSDDHILDDVPDDRLQISCSRMQTTFLICCWLQNSCGTSPGL 336

Query: 122 QDDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPS 181
           QDDLK+VLR++ESELLARGCGWKNVLYIHLYLA+M  F LANETYVSFITQEKCPFGVPS
Sbjct: 337 QDDLKSVLRKIESELLARGCGWKNVLYIHLYLADMKGFGLANETYVSFITQEKCPFGVPS 396

Query: 182 RSTIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKI 233
           RST+ELPLQQV+LGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQ  +
Sbjct: 397 RSTVELPLQQVQLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQATL 448

[Close]

BLAST of Cla007914 vs. NCBI nr
Match: gi|659082422|ref|XP_008441832.1| (PREDICTED: diphthine--ammonia ligase isoform X3 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.4e-113
Identity = 203/232 (87.50%), Postives = 217/232 (93.53%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLG-ICDNTNLVDHEKVGLLFE 61
           ARIVLDEFKVVMHSSDSIAPVGILHPVSFHL+YK KTSSLG ICDN NLVD EK GLLFE
Sbjct: 170 ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLQYKAKTSSLGSICDNKNLVDQEKGGLLFE 229

Query: 62  IQGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGL 121
           IQGDCFQNCD LQSVAD SSD+HIL+DVPD+RLQISCSRM+ TF +CCWLQ+SC TSPGL
Sbjct: 230 IQGDCFQNCDILQSVADVSSDDHILDDVPDDRLQISCSRMQTTFLICCWLQNSCGTSPGL 289

Query: 122 QDDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPS 181
           QDDLK+VLR++ESELLARGCGWKNVLYIHLYLA+M  F LANETYVSFITQEKCPFGVPS
Sbjct: 290 QDDLKSVLRKIESELLARGCGWKNVLYIHLYLADMKGFGLANETYVSFITQEKCPFGVPS 349

Query: 182 RSTIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKI 233
           RST+ELPLQQV+LGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQ  +
Sbjct: 350 RSTVELPLQQVQLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQATL 401

[Close]

BLAST of Cla007914 vs. NCBI nr
Match: gi|778667919|ref|XP_011649008.1| (PREDICTED: diphthine--ammonia ligase isoform X2 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 2.9e-112
Identity = 203/232 (87.50%), Postives = 217/232 (93.53%), Query Frame = 1


Query: 2   ARIVLDEFKVVMHSSDSIAPVGILHPVSFHLKYKEKTSSLG-ICDNTNLVDHEKVGLLFE 61
           ARIVLD+F+VVMHSSDSIAPVGILHPVSFHLKYK KTSSLG ICDNTNLVDHEK GLLFE
Sbjct: 217 ARIVLDKFEVVMHSSDSIAPVGILHPVSFHLKYKAKTSSLGSICDNTNLVDHEKGGLLFE 276

Query: 62  IQGDCFQNCDALQSVADASSDNHILNDVPDNRLQISCSRMENTFSMCCWLQDSCDTSPGL 121
           IQGDCFQNCD LQSVAD SSDNHIL++VPD+RLQISCSRM+NTF +CCWLQ+SC    GL
Sbjct: 277 IQGDCFQNCDILQSVADVSSDNHILDEVPDDRLQISCSRMQNTFLICCWLQNSC----GL 336

Query: 122 QDDLKTVLREVESELLARGCGWKNVLYIHLYLANMTEFALANETYVSFITQEKCPFGVPS 181
           QDDLKTVLR++ESELLARGCGWKNVLYIHLYLA+M  F LANETYVSFITQEKCPFGVPS
Sbjct: 337 QDDLKTVLRKIESELLARGCGWKNVLYIHLYLADMNGFGLANETYVSFITQEKCPFGVPS 396

Query: 182 RSTIELPLQQVRLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQVKI 233
           RST+ELPLQQV+LGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQ  +
Sbjct: 397 RSTVELPLQQVQLGNAYIEVLVANDQTKRVLHVQSISSWAPSCIGPYSQATL 444

The following BLAST results are available for this feature:

BLAST of Cla007914 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPH6_SCHPO	1.3e-06	25.44	Diphthine--ammonia ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)...	[more]

BLAST of Cla007914 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKJ7_CUCSA	6.7e-116	88.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075360 PE=4 SV=1	[more]
F6H602_VITVI	8.6e-79	62.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00850 PE=4 SV=...	[more]
A5C6M1_VITVI	8.6e-79	62.92	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044131 PE=4 SV=1	[more]
V4T6J7_9ROSI	5.8e-75	62.34	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019185mg PE=4 SV=1	[more]
A0A067DRF0_CITSI	5.8e-75	62.34	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004613mg PE=4 SV=1	[more]

BLAST of Cla007914 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778667915\|ref\|XP_004152819.2\|	9.6e-116	88.79	PREDICTED: diphthine--ammonia ligase isoform X1 [Cucumis sativus]	[more]
gi\|778667923\|ref\|XP_011649009.1\|	9.6e-116	88.79	PREDICTED: diphthine--ammonia ligase isoform X3 [Cucumis sativus]	[more]
gi\|659082418\|ref\|XP_008441829.1\|	3.4e-113	87.50	PREDICTED: diphthine--ammonia ligase isoform X1 [Cucumis melo]	[more]
gi\|659082422\|ref\|XP_008441832.1\|	3.4e-113	87.50	PREDICTED: diphthine--ammonia ligase isoform X3 [Cucumis melo]	[more]
gi\|778667919\|ref\|XP_011649008.1\|	2.9e-112	87.50	PREDICTED: diphthine--ammonia ligase isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla007914	Cla007914	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla007914	Cla007914.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla007914.1.cds1	Cla007914.1.cds1	CDS
Cla007914.1.cds2	Cla007914.1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	GENE3D	G3DSA:3.30.1330.40		coord: 211..230 score: 8.6E-5coord: 114..187 score: 2.
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	unknown	SSF55298	YjgF-like	coord: 110..188 score: 5.7