Cla007888.1 (mRNA) Watermelon (97103) v1

Overview
NameCla007888
TypemRNA
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTranscriptional regulator ATRX (Fragment) (AHRD V1 *--- ATRX_MACEU)
LocationChr11 : 9941438 .. 9947858 (-)
Sequence length1272
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTCTCTGATGATGAAAATGGAGATGCTTGCCATAAAATCAAGATTGACATACCCAATGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATATGGCTTCTGTGCTTCCTTCGGCCTTATCTGATTTTGTGGAACCTCTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTGACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCTTTGATAAAAGAGGATTCTGCTTTCAATCTGACGACGTTGAACACCATATGTAACACGGAACAGAATGACCATGGTGCTGATTCTCTTCCATCAGAGCGTCCGAATGAGAAGATCCGTTGTACTGCTTGTGATCAAGTGGTTATTAAAGCATATGCTCATCCTTTCCTTAAAGTAATTGTTTGTGCAGATTGTAAATGCTTGATGGATGACAAGAAGAATGTAAAGGTACAGAAAGAAGTAACCTGTTGATCATACTAAAATTTGTATTTTTGTTTTGCATAAAATTTTGACTGCACTATGACATGGTTCATTATATCATACTAAGTTGATATACTAGGTTGTTTCAATGTTATGGGTAAAAAGAAATTAAAGCAATCAATGTATGCTGTCCAGTGTTATTAGTTAAAGCAGTCACTACCGATTTTTTCTGTTGAAACTTGAAAGAAAAAAAATGGTTGTTTAAGAACTATGTCTGGCTCAGTTTAAGGGGAGGCTTCCGCGTTGGCATCTTTCTAGTCATTTTGGTTATGTTTTCAGTTTCAAGCTTCATCTGCCTTCGTCAGCTTTCTAAGTTCTTCGTCACTCTTGGCTCAAGTTTTGCTCTTTGCCAACTGTTCTGTTCATTTTGGAAGTTTTGTTCTTTGGGTGCTTATATTTTACTTTCTTTTGTTTCTAAGGATTAGTCTTTTCATTTTTGTTCTTGTTAAATTGTTTTCTTGGTTGTTTTCTTTCATTACTTATTTCTTTGTACTATGAGCTTTTGGCTCTTTTCATTATATAATATAAAAAGTTTGGTTTTCGTTTAAAAAAAAATGAAAAAAGAAAAATTGTTGTATTTTGCATGGTTGGTTTTTATTATCCCACATGAAATGAAAGTAAAATGACTCGTCTTCTAGTCCTTTACATCCTATTGTTTATCCACAATAAGGCTTTTCTTAAAGTTCTTGGGTCTCATGTTCGAATGGTTTTAGGAACCTGATTGCTCTGAATGCTATTGCGGATGGTGTGGCTGCAATGCTGACTTAGTAAGTTGTAAATCATGTAAAACACTATTTTGTGTTGGTTGCATAAGGAGGAACCTTGGTGTCGAGTGCTTGCTCAAGGCCCAGGCTTCTGGCTGGCATTGTTGTTGTTGTCGCCCAAGTCTCTTGCAACCCTTAACCACGCAGTTGGAGGAAGCCTTAGGATCTGGAGAGTTGACAGGTTCAAGCTCTGATAGCGATTCAGACAACCCAAATGCAGATATAAATGTAACCATAAGGTAACTCACCAGCCATTAATCTTTTTCTCACATATTTTTTTTATAAGGAACAAAGACTTGTAATTTGTTGTAACAAAAAAATTTACAAAAAGATAAAAAAGGAGATGGAGCTATCCTCAAACAGATAAGGGAATTACAAACAAGGCTCCAAATTGAAGTTACAAAAAGTTACAAACACAGTTATGAAGAAATCCTTAAGGGCCCATTTGGAATGCATATATTGTTTCATGGGTGTCGATATTACATATATGAGATTTGAATATTTGAGTTTTAAATGCCTGAGATAATTAATGTTTGTGTTTGGATATGTAGGATAATTAATGTTTGGTTATTAAATATCAGTGTTTGATTTACTAATTTTGTATATAGAAATCAAAATCAAATAATTATTTAATTAAATGCAAAAGACCAATTATTTGAGTCATTAAATTTAGCATTATTCAATGGGATGTCTTCAAAAATAGAAAAACTGTTGAATATAATTACAAATATAGTGAAATTTTACTTTCTATCTGTACTAGACCGTGATAGACCCAAATAGACATCTATCACTTTACTTGATAGACACGGATAGATGTCTATTTGGGTCTATCGCAGATAGAAAGTAAAATTTTGCCATATTTGTAAATAGTTCGATATTTTTTCTAGTTAGAATGATTTTCCTTATTCAATATATTGTTATATGAATTAATTATTTAATCAATTAAAATAAATATAAAGGAATATTTTCATCTTAAACATTTATTAAACATAATTAAGTTTATTTAAATTAATTACTAAAATTAATTAAATTAATATAAATTAATTAGAAAAGTAATAATTAATAAGAATAATTTATATTGAATAGACAAGATAATATAAAATATTAATTATAAATATATTGGTTGAAATTTATTAAGTGTAAATAATATATTTTTATTTAATAATTAATTAAAATTAATAATAATGATTAATTGATAGTAATTTATTAATTAACTATACTATATTTTTATTATTCATCTCCTTTGCGTAAAAAATTTACTATTATGCGGGGTATTAAAAAACCCATGTCAGATGGGTTTTAAAGTGAAATCCTATGAGACAAACAAGGATGTTAAATGTCTGTTTGAAATCCCACTGAAAAACCTGTGAAATAAACGGGCCCTAAAGGAGAATACCATCATCAGTCCAACAAAACGCTATAAAAGTTGCAGAAAAATAACTTAACCCCATAGAATAAATTTGTGATTGGTTTATTTATTATTACTTTTTTTTTGATTGGTGACCAGTTCTTGGTTTTCTTAGGAAGATTGAAAGTAGCTTTTGGTTGGTTCTTAGTGTTTGGTGGATGCCTTATCCGTAGCTTCATCGTACATTCACAACCTCAAGCCTCTTTCTTCCCGACGAAAATATTTGAGAAGTCTCTAGTTCTTTAAATGCGTGTTTATTTTCTTGGTTATCTTTATAATGTTGTATTTGTTTGTATTGTTTCTTTCCAGTCTCTTTGAGATTATGTATCCCTTGAATATATATTCATTTTCATTGTATCAATGAGATGTTTCTTGTTCAAAGAAAATTTCAAGTGGAATAAAATAACAGTTTAAAACACACAACATGATTGTCCATTTTGAAAATTAGAAAACTGCCAATATAAAAACTGTTAGAATTAGAGGAAAAAATACTAGGTTTATGTGGAAACCCTAATAATGGGAGAAAAACCACAATTGAATTTTTTCTCTTATTGATTTGATACATTACAATGTTACAAGAGGGGAGAATAAATAAAGACTCTAATCAATAAAAGGAAAGGATATTAGGGAACATAAAAGGAAAAAATACACAATACATAATCTACAAAATCCCCCAATATCTTTTCTAATTTTCAACAAAAAAGAAAAAAAAAGAAAACCATCTAGGAGCTATATCAGTTTCAATGAAACACCAAAGAGGATAGACCTTGAAGCAGGCAGGGAATCTTCTCTTTGCAACACTAGGGAAGATTTCAACAAAACCAGACTTTTCTTGAGAAGCTTGCAATGTCAAAACTTTTAACTTAAAGCCACCTGAAAGGTAGATAATTGAGGAAAACCTATCCTCTAAGGAATTTGCATGATCTGACTAAATAAAATTCTTATAGTTGATAATATTTTGAGACAAATTATCTGGCTTTTATTACTTTTATTTTTTCTTGAGCTTCAGTTACCTAAAACTATGGCTAGGTTTTCTTTGCAATCATTTTTATTATTATAGCCTAAATTAGACTCTTGTTTTTCTGTTGTAATATGAATACTCTACTTTACCAATCAGCTCAAAGAGAAAGCGTAAGAAAAAGATACGGCGGATACTTGATGATGCTGAATTAGGAGAAGATACTAGAAAAAAAATTGCTATAGAAAAGGTAAATTTAATGGATTAATTTTGTATGATTTTACTTTGTAACTTTTAGAGAATGCTTCACCATGTTAAAATTTTTTTTTTCTCTCTAAAGGAACGCCAAGAACGTCTAAAATCATTACAAGTTCAGTTTTCCTCCAATTCTAAAATGATGAGCTCTGCTGGCTTTTGTGGAAATCTATCTGAAGGTGCCAGTGCCGAAGTCCTTGGTGATGCCTCAACAGGATATATAGTGAATGTTGTGAGGGAGAAAGGAGAAGAGGCCGTCAGAATTCCACCAAGCATTTCATCAAAGTTAAAAACCCATCAGGTTTGAACATAGCTGGCACATGCGCGTGATTCTCTTTTCAAAATTTTCTAGAATTTTTATTTTATTTTTTATTTTTTAATTTTTTTTAAAAAAAGGAAAAAAAAGAAAAAAGACTATTGCTCTAAGGATACAAACTCCACAATGGAGCTTTTCCACAACACAACCCAACCTACCATTTTGCTGTTCCATTTCTTTAAACTTGAGTAAGCCTAGCTTTCGATAAGAAACAAACTTTCAATGGACTACTAAGCTTCAACGTAACCTTGCATATTTTTCGCAAAAAATTAAAGTGCCATTTGTGTCATGCAAATTGGTAATCTCGATGTAATAGTTCCAGCTCAAAAATTCTCTCAATACCTTTTTTCTCATTACATGGATGAATCAATCTACTTGAAGAGTCTTTCACCATAGTGAAATGAGTGTGCTCAATTCTTGGCATGTGTTTCATGCAATCCGACCCCTTCAAATTTGTGCAACCCAACTCCAGTTTGGTCCTCCCCAGTTCTGATTTACTGCCTCCCTTTCATAAGTTTTTTTTCAACCCATTTCTTCGTTAATTATGGGTTATGCAACAACTTTTTAAATGGGTTTATAAGATGCTTTGATACTCCAACTTTGGCTAAAATGGCTGGGCAAAATCTTAGTGGTAGACATGTACATAGTTCTTAGAAACCAAAGAAAATTTTTGATGAGAGTAATGCTCTACAATTCTTAGATATTTTATGGGCTCTATCAATCTTTGTAGTTGCAATGCAAGATTTCCTTGGGATTACTACAAATCATCGATAAAAAAAGCTTTGTACTTTTTATTTTCCTTTTGAAACTTGAGTTTTTTTTTTTCTTTTTTTTCGGGAGGGATAGAATGATGTAGGATTACAATAAATTAGGTATCTTGGTCAATCTTTGATTGATTAGGATTATAATTAGTTTTCTCAGTTAATTAGAATTAGTTTTCTTAATTAATTAGGACAATGATTAGTTTGTTTTCAATTTTCTATAAATAGAAGAAGTTTTCCTTGTCGAGTTATGGGAAGTGGCTACCTAATAAAGATTGAATAAAAAAGACAGAACAAAAAAATGATTTTTGTTCTTTTGATAGTTTGGGGAATTAAAGCTTATTGTCTTCTTGTATTCGTAGTTTTGATAATAAAGATTTTGATTTAATTCTTGGAGAGTTCTCCTTTTATCTCTTAGACCACATCATTTAAGTTCATATGAGATAAATGTGGTGGCTTTTTCGCCATGTGCCATGTCCAGTCAAAGGGAAAGATCTTTGAATTTAGCATTTGCACGCCTAAAAATCAAGCAAAACAGAACAAGTTTTATTCCAGCTGTGGTTCATCATCCCATTGAGATTGTCAACGGTTATTTTCTTCTCCAAATTAGGGGTCTTCCCATCAAAAAACATTACACTGGCGATGAAGTTTTCTTATCAGAGGACCATGGCATTGATGAAGTTGTGAGATTTTCGGCATAACACAATAAAGAGAGGGCTCAATTTTCAGATCCTAACATCTTGGTTGATCGTATGGAGGTGGGGGCTAAAATAATGGGGTTTGATACTGTTAGACCACCAATACATTATACTTCAAGAGAGTAGTTCTTGTTCTGTTGTTAGCTGGTAGGCTGTTTGTTGTATGCTTGTTGGGTCTTTCTGAGTGCAGGTGGAAGGAGACCTAACCGATACTTTGGCTATGAGGGGGCTAAAATTAAGGAACCAATTAATATGGCCAACAAAAAGGTAAAATTTTGATTTAACCAAATTTATTTGTTTGCAAATTCTCCCCAATTACCATTCCTTCAAATTTTGACTTAGCTCCTTGATACGGTGGAGATTACACATGTCACAACCACCCAACCTTTCCTAATCCGAGGAAGAAAGTGTACACCAATGGGAAGAAAAACAAGCTCAAATGGGAACTACAGAACCTTAAATCTTTGGTTAAATCTGAATAAACAGCTACATTGGCTCTTTTGGAAGGAGTTGCAATTGATCAATGACATTTATAACTTGGAATGTGTGTGTGGATTGAATGCTTGGAAAAAACGAGAATTGGTTCAAATGTTATTGCAACAACATATCTCTAGTATTGTTCTTCTTTAGGAAACCGAACTTTTTGGTTTTGATTCGTATTTTATTAGATCTGTTTGGATCTCCTCACATATTGGCTGCACAATGCTTGATGCTGTTGATTCCTCAGGGGTATTTTACTGTTTTGGAGCGGGCTTGA

mRNA sequence

ATGGGGTTCTCTGATGATGAAAATGGAGATGCTTGCCATAAAATCAAGATTGACATACCCAATGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATATGGCTTCTGTGCTTCCTTCGGCCTTATCTGATTTTGTGGAACCTCTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTGACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCTTTGATAAAAGAGGATTCTGCTTTCAATCTGACGACGTTGAACACCATATGTAACACGGAACAGAATGACCATGGTGCTGATTCTCTTCCATCAGAGCGTCCGAATGAGAAGATCCGTTGTACTGCTTGTGATCAAGTGGTTATTAAAGCATATGCTCATCCTTTCCTTAAAGTAATTGTTTGTGCAGATTGTAAATGCTTGATGGATGACAAGAAGAATGTAAAGGAACCTGATTGCTCTGAATGCTATTGCGGATGGTGTGGCTGCAATGCTGACTTAGTAAGTTGTAAATCATGTAAAACACTATTTTGTGTTGGTTGCATAAGGAGGAACCTTGGTGTCGAGTGCTTGCTCAAGGCCCAGGCTTCTGGCTGGCATTGTTGTTGTTGTCGCCCAAGTCTCTTGCAACCCTTAACCACGCAGTTGGAGGAAGCCTTAGGATCTGGAGAGTTGACAGGTTCAAGCTCTGATAGCGATTCAGACAACCCAAATGCAGATATAAATGTAACCATAAGCTCAAAGAGAAAGCGTAAGAAAAAGATACGGCGGATACTTGATGATGCTGAATTAGGAGAAGATACTAGAAAAAAAATTGCTATAGAAAAGGAACGCCAAGAACGTCTAAAATCATTACAAGTTCAGTTTTCCTCCAATTCTAAAATGATGAGCTCTGCTGGCTTTTGTGGAAATCTATCTGAAGGTGCCAGTGCCGAAGTCCTTGGTGATGCCTCAACAGGATATATAGTGAATGTTGTGAGGGAGAAAGGAGAAGAGGCCGTCAGAATTCCACCAAGCATTTCATCAAAGTTAAAAACCCATCAGGTGGAAGGAGACCTAACCGATACTTTGGCTATGAGGGGGCTAAAATTAAGGAACCAATTAATATGGCCAACAAAAAGGAAACCGAACTTTTTGGTTTTGATTCGTATTTTATTAGATCTGTTTGGATCTCCTCACATATTGGCTGCACAATGCTTGATGCTGTTGATTCCTCAGGGGTATTTTACTGTTTTGGAGCGGGCTTGA

Coding sequence (CDS)

ATGGGGTTCTCTGATGATGAAAATGGAGATGCTTGCCATAAAATCAAGATTGACATACCCAATGGTTCTGATGCTTCAAGTGATATTGACATGGAAAGGTCTATGGAGCATATGGCTTCTGTGCTTCCTTCGGCCTTATCTGATTTTGTGGAACCTCTAGGTTCCAAGCGTTTAAATGATATGGAAGAATTGACCACTCAAACTAAAAAGAGTCGAACTAATGGTGTACATAATGATGAAAGTTCTTTGATAAAAGAGGATTCTGCTTTCAATCTGACGACGTTGAACACCATATGTAACACGGAACAGAATGACCATGGTGCTGATTCTCTTCCATCAGAGCGTCCGAATGAGAAGATCCGTTGTACTGCTTGTGATCAAGTGGTTATTAAAGCATATGCTCATCCTTTCCTTAAAGTAATTGTTTGTGCAGATTGTAAATGCTTGATGGATGACAAGAAGAATGTAAAGGAACCTGATTGCTCTGAATGCTATTGCGGATGGTGTGGCTGCAATGCTGACTTAGTAAGTTGTAAATCATGTAAAACACTATTTTGTGTTGGTTGCATAAGGAGGAACCTTGGTGTCGAGTGCTTGCTCAAGGCCCAGGCTTCTGGCTGGCATTGTTGTTGTTGTCGCCCAAGTCTCTTGCAACCCTTAACCACGCAGTTGGAGGAAGCCTTAGGATCTGGAGAGTTGACAGGTTCAAGCTCTGATAGCGATTCAGACAACCCAAATGCAGATATAAATGTAACCATAAGCTCAAAGAGAAAGCGTAAGAAAAAGATACGGCGGATACTTGATGATGCTGAATTAGGAGAAGATACTAGAAAAAAAATTGCTATAGAAAAGGAACGCCAAGAACGTCTAAAATCATTACAAGTTCAGTTTTCCTCCAATTCTAAAATGATGAGCTCTGCTGGCTTTTGTGGAAATCTATCTGAAGGTGCCAGTGCCGAAGTCCTTGGTGATGCCTCAACAGGATATATAGTGAATGTTGTGAGGGAGAAAGGAGAAGAGGCCGTCAGAATTCCACCAAGCATTTCATCAAAGTTAAAAACCCATCAGGTGGAAGGAGACCTAACCGATACTTTGGCTATGAGGGGGCTAAAATTAAGGAACCAATTAATATGGCCAACAAAAAGGAAACCGAACTTTTTGGTTTTGATTCGTATTTTATTAGATCTGTTTGGATCTCCTCACATATTGGCTGCACAATGCTTGATGCTGTTGATTCCTCAGGGGTATTTTACTGTTTTGGAGCGGGCTTGA

Protein sequence

MGFSDDENGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLNDMEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKIRCTACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKSCKTLFCVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDSDSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSNSKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQVEGDLTDTLAMRGLKLRNQLIWPTKRKPNFLVLIRILLDLFGSPHILAAQCLMLLIPQGYFTVLERA
Homology
[Close]
BLAST of Cla007888 vs. Swiss-Prot
Match: CHR20_ARATH (Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=2)

HSP 1 Score: 288.9 bits (738), Expect = 9.1e-77
Identity = 156/302 (51.66%), Postives = 206/302 (68.21%), Query Frame = 1 

Query: 67  QTKKSRTNG-VHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKIRCTAC 126
           Q K   T+  VHN E + I+E+  F+ + ++ +  +   +  A    S+ P    RCTAC
Sbjct: 429 QVKSPETSTQVHNSEVN-IEENGNFSNSDVDKMTPSTHINVDAKRDDSQNPANNFRCTAC 488

Query: 127 DQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKSCKTLF 186
           ++V ++ ++HP L+VIVC DCK  ++D+ + K  D  E +C WCG  ADL+ C++C+ LF
Sbjct: 489 NKVAVEVHSHPLLEVIVCMDCKRSIEDRVS-KVDDSLERHCEWCGHIADLIDCRTCEKLF 548

Query: 187 CVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEA--------LGSGELTGSS 246
           C  CI+RN+G E + +AQ+SGW CCCC P  LQ LT +LE+A        L S   + SS
Sbjct: 549 CASCIKRNIGEEYMSEAQSSGWDCCCCSPIPLQRLTLELEKAMRDKKSIELSSDSSSDSS 608

Query: 247 SDSDSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQF 306
           SD++S + +AD+NVTISSK+K KKKIRRI+DDAELG+DTR KIAIEK RQERL+SL  QF
Sbjct: 609 SDNNSVDTDADVNVTISSKKKSKKKIRRIIDDAELGKDTRTKIAIEKARQERLRSL--QF 668

Query: 307 SSNSKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQV 360
           S+  K +SS G   ++ EGA  EVLGDA +GYIVNVVRE GEEAVR+P SIS+KLK HQV
Sbjct: 669 SARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQV 726

[Close]
BLAST of Cla007888 vs. Swiss-Prot
Match: ATRX_MACEU (Transcriptional regulator ATRX (Fragment) OS=Macropus eugenii GN=ATRX PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.0e-11
Identity = 42/111 (37.84%), Postives = 54/111 (48.65%), Query Frame = 1 

Query: 120 IRCTACDQVVI-----KAYAHPFLKVIVCADC-KCLMDDKKNVKEPDCSECYCGWCGCNA 179
           + CTAC Q V        Y HP LKV++C +C K  M D  + ++ D  +  C WC    
Sbjct: 31  VSCTACGQQVNHFQKDSIYRHPTLKVLICKNCYKYYMSDDIS-RDADGMDEQCRWCAEGG 90

Query: 180 DLVSCKSCKTLFCVGCIRRNLGVECL--LKAQASGWHCCCCRPSLLQPLTT 223
           +L+ C  C   FC  CI RNLG + L  +  + S W+C  CRP  L  L T
Sbjct: 91  NLICCDFCHNAFCKKCILRNLGRKELSAIMDENSQWYCYICRPEPLLDLVT 140

[Close]
BLAST of Cla007888 vs. Swiss-Prot
Match: ATRX_HUMAN (Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-11
Identity = 61/235 (25.96%), Postives = 93/235 (39.57%), Query Frame = 1 

Query: 8   NGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND------- 67
           N D     K +  + S+ S      RS    + V     SD  +PL  + +N+       
Sbjct: 53  NSDMMENSKEEGTSSSEKSKSSGSSRSKRKPSIVTKYVESDDEKPLDDETVNEDASNENS 112

Query: 68  -----MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSER 127
                M+ L   T   +   V N++    K     + + + T    ++ + G   + S  
Sbjct: 113 ENDITMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVS-- 172

Query: 128 PNEKIRCTACDQVVI-----KAYAHPFLKVIVCADC-KCLMDDKKNVKEPDCSECYCGWC 187
                 CTAC Q V        Y HP L+V++C +C K  M D  + ++ D  +  C WC
Sbjct: 173 ------CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDIS-RDSDGMDEQCRWC 232

Query: 188 GCNADLVSCKSCKTLFCVGCIRRNLGVECL--LKAQASGWHCCCCRPSLLQPLTT 223
               +L+ C  C   FC  CI RNLG + L  +  + + W+C  C P  L  L T
Sbjct: 233 AEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278

[Close]
BLAST of Cla007888 vs. Swiss-Prot
Match: ATRX_PANTR (Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-11
Identity = 61/235 (25.96%), Postives = 93/235 (39.57%), Query Frame = 1 

Query: 8   NGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND------- 67
           N D     K +  + S+ S      RS    + V     SD  +PL  + +N+       
Sbjct: 53  NSDMMENSKEEGTSSSEKSKSSGSSRSKRKPSIVTKYVESDDEKPLDDETVNEDASNENS 112

Query: 68  -----MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSER 127
                M+ L   T   +   V N++    K     + + + T    ++ + G   + S  
Sbjct: 113 ENDITMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVS-- 172

Query: 128 PNEKIRCTACDQVVI-----KAYAHPFLKVIVCADC-KCLMDDKKNVKEPDCSECYCGWC 187
                 CTAC Q V        Y HP L+V++C +C K  M D  + ++ D  +  C WC
Sbjct: 173 ------CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDIS-RDSDGMDEQCRWC 232

Query: 188 GCNADLVSCKSCKTLFCVGCIRRNLGVECL--LKAQASGWHCCCCRPSLLQPLTT 223
               +L+ C  C   FC  CI RNLG + L  +  + + W+C  C P  L  L T
Sbjct: 233 AEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278

[Close]
BLAST of Cla007888 vs. Swiss-Prot
Match: ATRX_PONPY (Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-11
Identity = 61/235 (25.96%), Postives = 93/235 (39.57%), Query Frame = 1 

Query: 8   NGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND------- 67
           N D     K +  + S+ S      RS    + V     SD  +PL  + +N+       
Sbjct: 53  NSDMMENSKEEGTSSSEKSKSSGSSRSKRKPSIVTKYVESDDEKPLDDETVNEDASNENS 112

Query: 68  -----MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSER 127
                M+ L   T   +   V N++    K     + + + T    ++ + G   + S  
Sbjct: 113 ENDITMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVS-- 172

Query: 128 PNEKIRCTACDQVVI-----KAYAHPFLKVIVCADC-KCLMDDKKNVKEPDCSECYCGWC 187
                 CTAC Q V        Y HP L+V++C +C K  M D  + ++ D  +  C WC
Sbjct: 173 ------CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDIS-RDSDGMDEQCRWC 232

Query: 188 GCNADLVSCKSCKTLFCVGCIRRNLGVECL--LKAQASGWHCCCCRPSLLQPLTT 223
               +L+ C  C   FC  CI RNLG + L  +  + + W+C  C P  L  L T
Sbjct: 233 AEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278

[Close]
BLAST of Cla007888 vs. TrEMBL
Match: A0A0A0LMU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076520 PE=4 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 7.3e-182
Identity = 322/357 (90.20%), Postives = 332/357 (93.00%), Query Frame = 1 

Query: 1   MGFSDDENGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND 60
           MG SDDENGD   KIK+DIPNGSDASSDIDMERSMEH ASVLPSA S+FVEPLGSKRLND
Sbjct: 311 MGLSDDENGDV--KIKVDIPNGSDASSDIDMERSMEHTASVLPSASSNFVEPLGSKRLND 370

Query: 61  MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKI 120
           MEE+ TQTKKSRTNGVHNDE+S +KE SA     LNTICNTEQND+ ADSLPS  PNEKI
Sbjct: 371 MEEVITQTKKSRTNGVHNDENSPMKEHSAL----LNTICNTEQNDYDADSLPSTCPNEKI 430

Query: 121 RCTACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKS 180
            CTACDQVVIK YAHPFL+VIVCADCK +MDDKKNVKEPDCSECYCGWCG NADLVSCKS
Sbjct: 431 HCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSECYCGWCGHNADLVSCKS 490

Query: 181 CKTLFCVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDS 240
           CKTLFC GCIRRNLGVECLLKAQASGWHCCCCRPSLLQ LTTQLEEALGS ELTGSSSDS
Sbjct: 491 CKTLFCTGCIRRNLGVECLLKAQASGWHCCCCRPSLLQSLTTQLEEALGSEELTGSSSDS 550

Query: 241 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSN 300
           DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDT+KKIAIEKERQERLKSLQVQFSSN
Sbjct: 551 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLQVQFSSN 610

Query: 301 SKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQV 358
           SKMMSSAGFCGNLSEGAS EVLGDASTGYIVNVVREKGEEA+RIPPSISSKLKTHQV
Sbjct: 611 SKMMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQV 661

[Close]
BLAST of Cla007888 vs. TrEMBL
Match: E0CU60_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g01460 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 3.3e-110
Identity = 209/368 (56.79%), Postives = 261/368 (70.92%), Query Frame = 1 

Query: 1   MGFSDDENGDACHKIKIDIPNGSDASSDIDMERSMEH-MASVLP-SALSDFVEPLGSKRL 60
           +  S++ +  AC   K ++    +    +D ER   +  +SVL  S L D  E  G KR 
Sbjct: 345 VSISNNNDDGACQSSKTEVSESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKRS 404

Query: 61  NDMEELTTQTKKSRTNGVHNDESSL----IKEDSAFNLTTL---NTICNTEQNDHGADSL 120
           +D  EL    K+ RT  + +D+ +     +      N+T +   + +  TE +  G+ SL
Sbjct: 405 HDNGELDVDNKRFRTVIIDSDDETHEVGNVSNSLVNNMTKMEGQSVLQETEGDFVGSGSL 464

Query: 121 PSERPNEKIRCTACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGC 180
           PS+  N    CTAC++V I+ + HP LKVI+C DCKCL++ K +VK+PDCSECYCGWCG 
Sbjct: 465 PSKHMNGNFHCTACNKVAIEVHCHPLLKVIICGDCKCLIERKMHVKDPDCSECYCGWCGR 524

Query: 181 NADLVSCKSCKTLFCVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEALGSG 240
           + DLV CKSCKTLFC+ CI+RN+G ECL   +ASGW CCCC PSLLQ LT++LE+A+GS 
Sbjct: 525 SNDLVGCKSCKTLFCITCIKRNIGEECLSDVKASGWQCCCCSPSLLQQLTSELEKAIGSS 584

Query: 241 ELTGSSSDSDSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLK 300
            LT SSSDSDSD+ + DINV ISSKR+RKKKIRRILDDAELGE+T++KIAIEKERQERLK
Sbjct: 585 SLTVSSSDSDSDDSDEDINVAISSKRRRKKKIRRILDDAELGEETKRKIAIEKERQERLK 644

Query: 301 SLQVQFSSNSKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSK 360
           SLQVQFS  SKMM++A   GNLSE  S EVLGDAS GYIVNVVREKGEEAVRIPPSIS+K
Sbjct: 645 SLQVQFSEKSKMMNAASCNGNLSEDTSVEVLGDASKGYIVNVVREKGEEAVRIPPSISAK 704

[Close]
BLAST of Cla007888 vs. TrEMBL
Match: W9S6N2_9ROSA (Transcriptional regulator ATRX-like protein OS=Morus notabilis GN=L484_024481 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 5.7e-110
Identity = 210/358 (58.66%), Postives = 260/358 (72.63%), Query Frame = 1 

Query: 4   SDDENGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLP-SALSDFVEPLGSKRLNDME 63
           +D+E+G ACH  K D P+G + +S++D   SM +   + P SAL D  EP GSK   + E
Sbjct: 368 NDNESGIACHNSKTDFPDGFE-TSNVDKGISMSNGTFLPPESALPDSNEPRGSKHKLETE 427

Query: 64  ELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKIRC 123
           E   + K+SRT    ND+ S +K +   +L            + GAD+L     NEK  C
Sbjct: 428 EPDIENKRSRTVVRDNDDESTVKVEDQADL-------KENAGEFGADNL-----NEKFHC 487

Query: 124 TACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKSCK 183
           TAC+++ +K + HP LKVIVCADCK +M++K  V +PDC+ECYCGWCG + DLV+CKSCK
Sbjct: 488 TACNKIAVKVHPHPLLKVIVCADCKAIMEEKMRVMDPDCAECYCGWCGRSTDLVNCKSCK 547

Query: 184 TLFCVGCIRRNLGVECLLKAQASGWHCCCC-RPSLLQPLTTQLEEALGSGELTGSSSDSD 243
             FC+ CI+ N+G ECL + Q + W CCCC RP LLQ LT +LE+A+       SSS+SD
Sbjct: 548 MFFCMICIKGNIGTECLSEVQNASWQCCCCCRPGLLQKLTLELEKAMVVERSIDSSSESD 607

Query: 244 SDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSNS 303
           SDN +AD++V +SSKRKRKKKIRRILDDAELGE+T++KIAIEKERQERLKSLQVQFSS S
Sbjct: 608 SDNSDADVDVALSSKRKRKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSGS 667

Query: 304 KMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQVEG 360
           K+MSSAGF GNLSE AS EVLGDAS GYIVNVVREKGEEAVRIPPSIS+KLK HQ+ G
Sbjct: 668 KVMSSAGFNGNLSEDASTEVLGDASKGYIVNVVREKGEEAVRIPPSISAKLKVHQIAG 712

[Close]
BLAST of Cla007888 vs. TrEMBL
Match: B9I5Q4_POPTR (SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0013s04610g PE=4 SV=2)

HSP 1 Score: 404.4 bits (1038), Expect = 1.6e-109
Identity = 203/336 (60.42%), Postives = 251/336 (74.70%), Query Frame = 1 

Query: 26  SSDIDMERSMEHMASVLPSALSDFVEPLGSKRLNDMEELTTQTKKSRTNGVHNDESSLIK 85
           S D+DME+ M    SV P   SD  EP  SKR N+ E+L+   KK RT  + +D  + I 
Sbjct: 303 SGDLDMEQLMSESNSVFPE--SDASEPRRSKRPNESEDLSINNKKIRTVIIDSDNEADIL 362

Query: 86  EDSAFNLTTLNTICNTEQN--DHGADSLPSERPNEKIRCTACDQVVIKAYAHPFLKVIVC 145
           ED + +   +       +N  D  A   PS+  +EK +CTACD+V ++ ++HP LKVIVC
Sbjct: 363 EDKSVHGIKVEDQSTLLENIGDPSAGCNPSQGSSEKFQCTACDKVAVEVHSHPLLKVIVC 422

Query: 146 ADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKSCKTLFCVGCIRRNLGVECLLKAQ 205
            DCK LM++K +VK+PDCSECYCGWCG N DLVSC+SC+TLFC  CI+RN+G E L K  
Sbjct: 423 KDCKFLMEEKMHVKDPDCSECYCGWCGKNNDLVSCRSCRTLFCTACIKRNIGEEYLYKVP 482

Query: 206 ASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDSDSDNPNADINVTISSKRKRKKKI 265
            SGW CCCC PSLLQ LT+QLE+A+GSG++  SSSDSDSD+ + +  VTISSKRK++KKI
Sbjct: 483 VSGWQCCCCSPSLLQRLTSQLEKAMGSGDIMVSSSDSDSDSSDTNDGVTISSKRKKQKKI 542

Query: 266 RRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSNSKMMSSAGFCGNLSEGASAEVLG 325
           RRI+DDAELGE+T++KIAIEKERQERLKSL+V+FS  SKMM+ A   GNL EGAS EV+G
Sbjct: 543 RRIIDDAELGEETKRKIAIEKERQERLKSLKVKFSDKSKMMNFASCSGNLPEGASVEVIG 602

Query: 326 DASTGYIVNVVREKGEEAVRIPPSISSKLKTHQVEG 360
           DA+TGYIVNV REKGEEAVRIPPS+SSKLK HQV G
Sbjct: 603 DATTGYIVNVAREKGEEAVRIPPSLSSKLKAHQVAG 636

[Close]
BLAST of Cla007888 vs. TrEMBL
Match: M5W6K1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000170mg PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.6e-109
Identity = 201/338 (59.47%), Postives = 253/338 (74.85%), Query Frame = 1 

Query: 24  DASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLNDMEELTTQTKKSRTNGVHNDESSL 83
           + S+++D E  M + +S +P    D  E  GSKRLN+ EEL    K+ RT  + +D+ + 
Sbjct: 442 ETSNNVDQESIMSNGSSPVP----DSSESRGSKRLNEDEELNLDNKRGRTVIIDSDDDAP 501

Query: 84  IKEDSAFNLTTLNTICNTEQNDH--GADSLPSERPNEKIRCTACDQVVIKAYAHPFLKVI 143
           +K+ S  NL       N + +        LPS   N+K+ CTAC+++ ++  +HP LKVI
Sbjct: 502 LKDISDCNLIKSEDQSNADASISISATGGLPSHGLNKKVYCTACNKLAVEVRSHPLLKVI 561

Query: 144 VCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKSCKTLFCVGCIRRNLGVECLLK 203
           +C DC+CL+D+K +VK+PDC ECYCGWCG + DLVSCKSCKT FC  CI+RN+G ECL +
Sbjct: 562 ICTDCRCLLDEKMHVKDPDCCECYCGWCGQSKDLVSCKSCKTSFCTTCIKRNIGEECLSE 621

Query: 204 AQASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDSDSDNPNADINVTISSKRKRKK 263
           AQ  GW CC C PSL+Q L  QLE+A+GSG++  SSSDSDSDN +A+++V ISSKRKRKK
Sbjct: 622 AQTCGWRCCFCCPSLIQTLMLQLEKAIGSGDMVVSSSDSDSDNSDAELDVAISSKRKRKK 681

Query: 264 KIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSNSKMMSSAGFCGNLSEGASAEV 323
           +IRRI+DD ELGE+T++KIAIEKERQERLKSLQVQFS+ SKM SSA   GNL EGASAEV
Sbjct: 682 RIRRIIDDTELGEETKRKIAIEKERQERLKSLQVQFSAKSKMKSSASCNGNLPEGASAEV 741

Query: 324 LGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQVEG 360
           LGDAS GYIVNVVREKGEEAVRIPPSIS+KLKTHQ+ G
Sbjct: 742 LGDASAGYIVNVVREKGEEAVRIPPSISAKLKTHQITG 775

[Close]
BLAST of Cla007888 vs. NCBI nr
Match: gi|778667965|ref|XP_011649017.1| (PREDICTED: protein CHROMATIN REMODELING 20 isoform X2 [Cucumis sativus])

HSP 1 Score: 646.7 bits (1667), Expect = 2.7e-182
Identity = 322/359 (89.69%), Postives = 333/359 (92.76%), Query Frame = 1 

Query: 1   MGFSDDENGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND 60
           MG SDDENGD   KIK+DIPNGSDASSDIDMERSMEH ASVLPSA S+FVEPLGSKRLND
Sbjct: 370 MGLSDDENGDV--KIKVDIPNGSDASSDIDMERSMEHTASVLPSASSNFVEPLGSKRLND 429

Query: 61  MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKI 120
           MEE+ TQTKKSRTNGVHNDE+S +KE SA     LNTICNTEQND+ ADSLPS  PNEKI
Sbjct: 430 MEEVITQTKKSRTNGVHNDENSPMKEHSAL----LNTICNTEQNDYDADSLPSTCPNEKI 489

Query: 121 RCTACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKS 180
            CTACDQVVIK YAHPFL+VIVCADCK +MDDKKNVKEPDCSECYCGWCG NADLVSCKS
Sbjct: 490 HCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSECYCGWCGHNADLVSCKS 549

Query: 181 CKTLFCVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDS 240
           CKTLFC GCIRRNLGVECLLKAQASGWHCCCCRPSLLQ LTTQLEEALGS ELTGSSSDS
Sbjct: 550 CKTLFCTGCIRRNLGVECLLKAQASGWHCCCCRPSLLQSLTTQLEEALGSEELTGSSSDS 609

Query: 241 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSN 300
           DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDT+KKIAIEKERQERLKSLQVQFSSN
Sbjct: 610 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLQVQFSSN 669

Query: 301 SKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQVEG 360
           SKMMSSAGFCGNLSEGAS EVLGDASTGYIVNVVREKGEEA+RIPPSISSKLKTHQ+ G
Sbjct: 670 SKMMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQISG 722

[Close]
BLAST of Cla007888 vs. NCBI nr
Match: gi|778667969|ref|XP_011649018.1| (PREDICTED: protein CHROMATIN REMODELING 20 isoform X3 [Cucumis sativus])

HSP 1 Score: 646.7 bits (1667), Expect = 2.7e-182
Identity = 322/359 (89.69%), Postives = 333/359 (92.76%), Query Frame = 1 

Query: 1   MGFSDDENGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND 60
           MG SDDENGD   KIK+DIPNGSDASSDIDMERSMEH ASVLPSA S+FVEPLGSKRLND
Sbjct: 366 MGLSDDENGDV--KIKVDIPNGSDASSDIDMERSMEHTASVLPSASSNFVEPLGSKRLND 425

Query: 61  MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKI 120
           MEE+ TQTKKSRTNGVHNDE+S +KE SA     LNTICNTEQND+ ADSLPS  PNEKI
Sbjct: 426 MEEVITQTKKSRTNGVHNDENSPMKEHSAL----LNTICNTEQNDYDADSLPSTCPNEKI 485

Query: 121 RCTACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKS 180
            CTACDQVVIK YAHPFL+VIVCADCK +MDDKKNVKEPDCSECYCGWCG NADLVSCKS
Sbjct: 486 HCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSECYCGWCGHNADLVSCKS 545

Query: 181 CKTLFCVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDS 240
           CKTLFC GCIRRNLGVECLLKAQASGWHCCCCRPSLLQ LTTQLEEALGS ELTGSSSDS
Sbjct: 546 CKTLFCTGCIRRNLGVECLLKAQASGWHCCCCRPSLLQSLTTQLEEALGSEELTGSSSDS 605

Query: 241 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSN 300
           DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDT+KKIAIEKERQERLKSLQVQFSSN
Sbjct: 606 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLQVQFSSN 665

Query: 301 SKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQVEG 360
           SKMMSSAGFCGNLSEGAS EVLGDASTGYIVNVVREKGEEA+RIPPSISSKLKTHQ+ G
Sbjct: 666 SKMMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQISG 718

[Close]
BLAST of Cla007888 vs. NCBI nr
Match: gi|778667972|ref|XP_011649019.1| (PREDICTED: protein CHROMATIN REMODELING 20 isoform X4 [Cucumis sativus])

HSP 1 Score: 646.7 bits (1667), Expect = 2.7e-182
Identity = 322/359 (89.69%), Postives = 333/359 (92.76%), Query Frame = 1 

Query: 1   MGFSDDENGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND 60
           MG SDDENGD   KIK+DIPNGSDASSDIDMERSMEH ASVLPSA S+FVEPLGSKRLND
Sbjct: 269 MGLSDDENGDV--KIKVDIPNGSDASSDIDMERSMEHTASVLPSASSNFVEPLGSKRLND 328

Query: 61  MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKI 120
           MEE+ TQTKKSRTNGVHNDE+S +KE SA     LNTICNTEQND+ ADSLPS  PNEKI
Sbjct: 329 MEEVITQTKKSRTNGVHNDENSPMKEHSAL----LNTICNTEQNDYDADSLPSTCPNEKI 388

Query: 121 RCTACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKS 180
            CTACDQVVIK YAHPFL+VIVCADCK +MDDKKNVKEPDCSECYCGWCG NADLVSCKS
Sbjct: 389 HCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSECYCGWCGHNADLVSCKS 448

Query: 181 CKTLFCVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDS 240
           CKTLFC GCIRRNLGVECLLKAQASGWHCCCCRPSLLQ LTTQLEEALGS ELTGSSSDS
Sbjct: 449 CKTLFCTGCIRRNLGVECLLKAQASGWHCCCCRPSLLQSLTTQLEEALGSEELTGSSSDS 508

Query: 241 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSN 300
           DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDT+KKIAIEKERQERLKSLQVQFSSN
Sbjct: 509 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLQVQFSSN 568

Query: 301 SKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQVEG 360
           SKMMSSAGFCGNLSEGAS EVLGDASTGYIVNVVREKGEEA+RIPPSISSKLKTHQ+ G
Sbjct: 569 SKMMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQISG 621

[Close]
BLAST of Cla007888 vs. NCBI nr
Match: gi|778667959|ref|XP_011649015.1| (PREDICTED: protein CHROMATIN REMODELING 20 isoform X1 [Cucumis sativus])

HSP 1 Score: 646.7 bits (1667), Expect = 2.7e-182
Identity = 322/359 (89.69%), Postives = 333/359 (92.76%), Query Frame = 1 

Query: 1   MGFSDDENGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND 60
           MG SDDENGD   KIK+DIPNGSDASSDIDMERSMEH ASVLPSA S+FVEPLGSKRLND
Sbjct: 376 MGLSDDENGDV--KIKVDIPNGSDASSDIDMERSMEHTASVLPSASSNFVEPLGSKRLND 435

Query: 61  MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKI 120
           MEE+ TQTKKSRTNGVHNDE+S +KE SA     LNTICNTEQND+ ADSLPS  PNEKI
Sbjct: 436 MEEVITQTKKSRTNGVHNDENSPMKEHSAL----LNTICNTEQNDYDADSLPSTCPNEKI 495

Query: 121 RCTACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKS 180
            CTACDQVVIK YAHPFL+VIVCADCK +MDDKKNVKEPDCSECYCGWCG NADLVSCKS
Sbjct: 496 HCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSECYCGWCGHNADLVSCKS 555

Query: 181 CKTLFCVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDS 240
           CKTLFC GCIRRNLGVECLLKAQASGWHCCCCRPSLLQ LTTQLEEALGS ELTGSSSDS
Sbjct: 556 CKTLFCTGCIRRNLGVECLLKAQASGWHCCCCRPSLLQSLTTQLEEALGSEELTGSSSDS 615

Query: 241 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSN 300
           DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDT+KKIAIEKERQERLKSLQVQFSSN
Sbjct: 616 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLQVQFSSN 675

Query: 301 SKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQVEG 360
           SKMMSSAGFCGNLSEGAS EVLGDASTGYIVNVVREKGEEA+RIPPSISSKLKTHQ+ G
Sbjct: 676 SKMMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQISG 728

[Close]
BLAST of Cla007888 vs. NCBI nr
Match: gi|700206177|gb|KGN61296.1| (hypothetical protein Csa_2G076520 [Cucumis sativus])

HSP 1 Score: 644.8 bits (1662), Expect = 1.0e-181
Identity = 322/357 (90.20%), Postives = 332/357 (93.00%), Query Frame = 1 

Query: 1   MGFSDDENGDACHKIKIDIPNGSDASSDIDMERSMEHMASVLPSALSDFVEPLGSKRLND 60
           MG SDDENGD   KIK+DIPNGSDASSDIDMERSMEH ASVLPSA S+FVEPLGSKRLND
Sbjct: 311 MGLSDDENGDV--KIKVDIPNGSDASSDIDMERSMEHTASVLPSASSNFVEPLGSKRLND 370

Query: 61  MEELTTQTKKSRTNGVHNDESSLIKEDSAFNLTTLNTICNTEQNDHGADSLPSERPNEKI 120
           MEE+ TQTKKSRTNGVHNDE+S +KE SA     LNTICNTEQND+ ADSLPS  PNEKI
Sbjct: 371 MEEVITQTKKSRTNGVHNDENSPMKEHSAL----LNTICNTEQNDYDADSLPSTCPNEKI 430

Query: 121 RCTACDQVVIKAYAHPFLKVIVCADCKCLMDDKKNVKEPDCSECYCGWCGCNADLVSCKS 180
            CTACDQVVIK YAHPFL+VIVCADCK +MDDKKNVKEPDCSECYCGWCG NADLVSCKS
Sbjct: 431 HCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSECYCGWCGHNADLVSCKS 490

Query: 181 CKTLFCVGCIRRNLGVECLLKAQASGWHCCCCRPSLLQPLTTQLEEALGSGELTGSSSDS 240
           CKTLFC GCIRRNLGVECLLKAQASGWHCCCCRPSLLQ LTTQLEEALGS ELTGSSSDS
Sbjct: 491 CKTLFCTGCIRRNLGVECLLKAQASGWHCCCCRPSLLQSLTTQLEEALGSEELTGSSSDS 550

Query: 241 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTRKKIAIEKERQERLKSLQVQFSSN 300
           DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDT+KKIAIEKERQERLKSLQVQFSSN
Sbjct: 551 DSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLQVQFSSN 610

Query: 301 SKMMSSAGFCGNLSEGASAEVLGDASTGYIVNVVREKGEEAVRIPPSISSKLKTHQV 358
           SKMMSSAGFCGNLSEGAS EVLGDASTGYIVNVVREKGEEA+RIPPSISSKLKTHQV
Sbjct: 611 SKMMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQV 661

The following BLAST results are available for this feature:
BLAST of Cla007888 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHR20_ARATH9.1e-7751.66Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=2[more]
ATRX_MACEU1.0e-1137.84Transcriptional regulator ATRX (Fragment) OS=Macropus eugenii GN=ATRX PE=2 SV=1[more]
ATRX_HUMAN2.3e-1125.96Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5[more]
ATRX_PANTR2.3e-1125.96Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1[more]
ATRX_PONPY2.3e-1125.96Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1[more]
BLAST of Cla007888 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMU1_CUCSA7.3e-18290.20Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076520 PE=4 SV=1[more]
E0CU60_VITVI3.3e-11056.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g01460 PE=4 SV=... [more]
W9S6N2_9ROSA5.7e-11058.66Transcriptional regulator ATRX-like protein OS=Morus notabilis GN=L484_024481 PE... [more]
B9I5Q4_POPTR1.6e-10960.42SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0013s04610... [more]
M5W6K1_PRUPE1.6e-10959.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000170mg PE=4 SV=1[more]
BLAST of Cla007888 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778667965|ref|XP_011649017.1|2.7e-18289.69PREDICTED: protein CHROMATIN REMODELING 20 isoform X2 [Cucumis sativus][more]
gi|778667969|ref|XP_011649018.1|2.7e-18289.69PREDICTED: protein CHROMATIN REMODELING 20 isoform X3 [Cucumis sativus][more]
gi|778667972|ref|XP_011649019.1|2.7e-18289.69PREDICTED: protein CHROMATIN REMODELING 20 isoform X4 [Cucumis sativus][more]
gi|778667959|ref|XP_011649015.1|2.7e-18289.69PREDICTED: protein CHROMATIN REMODELING 20 isoform X1 [Cucumis sativus][more]
gi|700206177|gb|KGN61296.1|1.0e-18190.20hypothetical protein Csa_2G076520 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR025766ADD
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla007888Cla007888gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla007888Cla007888.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla007888.1.cds6Cla007888.1.cds6CDS
Cla007888.1.cds5Cla007888.1.cds5CDS
Cla007888.1.cds4Cla007888.1.cds4CDS
Cla007888.1.cds3Cla007888.1.cds3CDS
Cla007888.1.cds2Cla007888.1.cds2CDS
Cla007888.1.cds1Cla007888.1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025766ADD domainPROFILEPS51533ADDcoord: 110..240
score: 11