Cla007342.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007342
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Tubulin beta chain (AHRD V1 ***- A9PEU3_POPTR); contains Interpro domain(s) IPR002453 Beta tubulin
Location	Chr3 : 19625124 .. 19628116 (+)
Sequence length	1338

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGATGAACATGGCATAGATCCGACTGGTCGATACACTGGTACTTCCGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGTCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACAGGTCCTTATGGACAAATCTTCAGGCCGGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCTAAGGGCCATTACACAGAAGGAGCAGAACTCATTGATGCTGTTCTCGACGTCGTGAGAAAGGAGGCTGAGAATTGTGATTGCCTTCAAGGTATAATCTATATCTGACATCATGTGCTTGATTAGATGTGATTGCTTGGATCTAATGAGAAATGTTTAAGTTGAGGCCTTTAGATTTACAATTAGTCGTTTTGCTAATGTACCCTTTACTTTTATTTTTGGATGTTCATGTGGGATGAGGTTTCAAGACATGATTGAGAGTGTCAAACGATGGATCCAGTATCAAAATGCCTTTTTACTTCCACGTGCCTTGCATCTTTGTTTGAGTTATATACTTATCGTAAAGAATATTATTAAACTCATTCAAATACTATGGTCTCTTCTATGAAACAACTTCCAAACGTGCCAAAAAGTATGTTAACGTCTTCTTTTGCTACTTTACCTTTTGCTTTTAATACTGTTTTCAAAAAAGTGTACTTGGGTATGTGTCCAAGTGTTAAGCACTTCTGGCATCTGAGCACATCTTGTTCATGGTCTTGCTTGTTGCAAGGAAAGGTCAAGCAAAGTCAATGAGGTCCATAGTTATTAATTAATTAATTAATTAATTAATTTTGTACACAAGAAGACTATTTTTCTTCATTTTCTTACATCTAAGATCTGAAAACTTTTTCTTCTTTATTGATGAGAAGTCGCTATGAACCGAGGTCGTTTGTTTTTGTGACGACTTTATTGAGAAATCATTCATACTCTAGAATTTCTGTTACATAGAAAATATTACAGTTTCCTGTCATGGGATTTCTGATTCATTAAGTGTTTTTAACTCAGTTTGCTTGCTTGACATTTTTTTTTGTGACCTCACAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTCTGATTTCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTCACTTTCTCTGTCTTTCCTTCTCCAAAAGTGTCAGATACAGTTGTAGAGCCCTACAACGCAACGCTTTCCGTTCACCAGCTCGTTGAGAATGCGGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTCAAGTTAACAACCCCTAGCTGTAAGTATGATTGATATCCATCATTTGTTAACAGACTAGAACATAATGGTGGAAGGAGTTGATTCAGTATTTCAACCTGCTCTAATCTAAACTGATGGTTTAGGTCTCGTTAGATAACGATTTCATTCTTCGTTTTCTGTCTTTGAAATTTATGTTTGTTTCTTTCAAAATTTTCAATTATGGTTTTCACTTTTGTAAAATAAATACTTGAGTTTCTTGTCAAATTCTAAAAACAAAAACAAGTTTTTGAAAACTACGTTTTTTTAGTTTTTAAAACTTGGCTTGGTGTTTGAAAATATTATTAGGCCGTGTATAACAAAACATTGAAACTTATGGGTGGAAAATAGTGTTTGCAAGTTTAATCCTTAAAAACTACCACTAAAAGTCAAAAAGTTATCAAGCAAGGCCTTAGTTATTAAAATTCATGAAGACACATACCAATTGGCATTAAAGTCAATCTTGTAGTGGGCATTCTAAGATGATGAAAGTATCTCCATTTTTTTTGAGGTTCCCCTGTGAAAATTTAACTTCCTAACCTCTAAATTTAACTGCAAATTTTCAGATAACTTTATCTGTCATTCTATAATGTCCAAATCTTAACTGAAACTTAAGATTAGAGCTGCACCTTCTTTTACAATATACTCTGGAGCTTTCTGCTCCATTATATTTTCTCTCTTTCAAATAGAGATTTGCAAATGGCTACATGTTAAATGAGTTGTGTCCATTAATTCAAAAATAGTTTATTAATGTATCAAGCAGTGGCCTATAAAACTTCACAGCTCTTAGAAAAACACAAAGCTATTATGCATATCTTCATTTCATTCCTACTCTTGAAAAGTGGTAACTAAATCTGTTTTGTTTTTGGCTTCTTTGCTCTTGAAACAGTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTAACTTGCTGTCTCAGATTTCCTGGCCAGCTGAACTCCGACCTCAGAAAACTCGCTGTCAATCTAATTCCCTTTCCTCGTCTACACTTCTTTATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACGCAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGCCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTTGTCGAGTGGATTCCAAACAATGTTAAATCCAGTGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGCAACTCAACCTCCATTCAGGAAATGTTCCGGCGTGTGAGTGAGCAGTTCACGGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGACGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAAGATGCCACAGCTGATGAGGAGTATTACGAAGAGGAAGACGAAGACCTCGAACAGGAGTAA

mRNA sequence

ATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGATGAACATGGCATAGATCCGACTGGTCGATACACTGGTACTTCCGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGTCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACAGGTCCTTATGGACAAATCTTCAGGCCGGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCTAAGGGCCATTACACAGAAGGAGCAGAACTCATTGATGCTGTTCTCGACGTCGTGAGAAAGGAGGCTGAGAATTGTGATTGCCTTCAAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTCTGATTTCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTCACTTTCTCTGTCTTTCCTTCTCCAAAAGTGTCAGATACAGTTGTAGAGCCCTACAACGCAACGCTTTCCGTTCACCAGCTCGTTGAGAATGCGGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTCAAGTTAACAACCCCTAGCTTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTAACTTGCTGTCTCAGATTTCCTGGCCAGCTGAACTCCGACCTCAGAAAACTCGCTGTCAATCTAATTCCCTTTCCTCGTCTACACTTCTTTATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACGCAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGCCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTTGTCGAGTGGATTCCAAACAATGTTAAATCCAGTGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGCAACTCAACCTCCATTCAGGAAATGTTCCGGCGTGTGAGTGAGCAGTTCACGGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGACGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAAGATGCCACAGCTGATGAGGAGTATTACGAAGAGGAAGACGAAGACCTCGAACAGGAGTAA

Coding sequence (CDS)

ATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGATGAACATGGCATAGATCCGACTGGTCGATACACTGGTACTTCCGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGTCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACAGGTCCTTATGGACAAATCTTCAGGCCGGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCTAAGGGCCATTACACAGAAGGAGCAGAACTCATTGATGCTGTTCTCGACGTCGTGAGAAAGGAGGCTGAGAATTGTGATTGCCTTCAAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTCTGATTTCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTCACTTTCTCTGTCTTTCCTTCTCCAAAAGTGTCAGATACAGTTGTAGAGCCCTACAACGCAACGCTTTCCGTTCACCAGCTCGTTGAGAATGCGGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTCAAGTTAACAACCCCTAGCTTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTAACTTGCTGTCTCAGATTTCCTGGCCAGCTGAACTCCGACCTCAGAAAACTCGCTGTCAATCTAATTCCCTTTCCTCGTCTACACTTCTTTATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACGCAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGCCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTTGTCGAGTGGATTCCAAACAATGTTAAATCCAGTGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGCAACTCAACCTCCATTCAGGAAATGTTCCGGCGTGTGAGTGAGCAGTTCACGGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGACGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAAGATGCCACAGCTGATGAGGAGTATTACGAAGAGGAAGACGAAGACCTCGAACAGGAGTAA

Protein sequence

MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYEEEDEDLEQE

Homology

[Close]

BLAST of Cla007342 vs. Swiss-Prot
Match: TBB3_ARATH (Tubulin beta-3 chain OS=Arabidopsis thaliana GN=TUBB3 PE=2 SV=2)

HSP 1 Score: 869.4 bits (2245), Expect = 1.7e-251
Identity = 419/447 (93.74%), Postives = 433/447 (96.87%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGIDPTGRYTG SDLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDS+R+GPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYEEEDEDLEQE 446
           EYQQYQDATADEE  Y +EE+ + +QE
Sbjct: 421 EYQQYQDATADEEGDYEDEEEGEYQQE 447

[Close]

BLAST of Cla007342 vs. Swiss-Prot
Match: TBB2_ARATH (Tubulin beta-2 chain OS=Arabidopsis thaliana GN=TUBB2 PE=2 SV=2)

HSP 1 Score: 869.4 bits (2245), Expect = 1.7e-251
Identity = 419/447 (93.74%), Postives = 433/447 (96.87%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGIDPTGRYTG SDLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDS+R+GPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYEEEDEDLEQE 446
           EYQQYQDATADEE  Y +EE+ + +QE
Sbjct: 421 EYQQYQDATADEEGDYEDEEEGEYQQE 447

[Close]

BLAST of Cla007342 vs. Swiss-Prot
Match: TBB2_PEA (Tubulin beta-2 chain (Fragment) OS=Pisum sativum GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 867.8 bits (2241), Expect = 5.0e-251
Identity = 415/443 (93.68%), Postives = 431/443 (97.29%), Query Frame = 1


Query: 3   EILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYVPR 62
           EI+H+QGGQCGNQIG+KFWEV+C EHGIDPTGRY G +DLQLER+NVYYNEASCGRYVPR
Sbjct: 1   EIVHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDTDLQLERINVYYNEASCGRYVPR 60

Query: 63  AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
           AVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRK
Sbjct: 61  AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 120

Query: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVVEP 182
           EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVVEP
Sbjct: 121 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 180

Query: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
           YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF
Sbjct: 181 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 240

Query: 243 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMCA 302
           PGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQ YRAL+VPE+TQQMWDSKNMMCA
Sbjct: 241 PGQLNSDLRKLAVNLIPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMMCA 300

Query: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGLS 362
           ADPRHGRYLTASA+FRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P GL 
Sbjct: 301 ADPRHGRYLTASAIFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLK 360

Query: 363 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
           MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY
Sbjct: 361 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 420

Query: 423 QQYQDATADEEYYEEEDEDLEQE 446
           QQYQDATA+E+ YEEE+ED  QE
Sbjct: 421 QQYQDATAEEDEYEEEEEDYHQE 443

[Close]

BLAST of Cla007342 vs. Swiss-Prot
Match: TBB1_LUPAL (Tubulin beta-1 chain OS=Lupinus albus GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 867.1 bits (2239), Expect = 8.5e-251
Identity = 418/441 (94.78%), Postives = 429/441 (97.28%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGID TGRY G ++LQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDNELQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDED 442
           EYQQYQDATADE+ YE EDE+
Sbjct: 421 EYQQYQDATADEDGYEYEDEE 441

[Close]

BLAST of Cla007342 vs. Swiss-Prot
Match: TBB8_ARATH (Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TUBB8 PE=2 SV=2)

HSP 1 Score: 866.3 bits (2237), Expect = 1.4e-250
Identity = 419/448 (93.53%), Postives = 433/448 (96.65%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGID TGRY G +DLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE---YYEEEDEDLEQE 446
           EYQQYQDATADEE    YEE++ ++++E
Sbjct: 421 EYQQYQDATADEEEGYEYEEDEVEVQEE 448

[Close]

BLAST of Cla007342 vs. TrEMBL
Match: B6T505_MAIZE (Tubulin beta-4 chain OS=Zea mays PE=2 SV=1)

HSP 1 Score: 882.9 bits (2280), Expect = 1.7e-253
Identity = 425/440 (96.59%), Postives = 435/440 (98.86%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+CDEHGIDPTGRYTG SDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
            KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 MKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDE 441
           EYQQYQDATADEE YE+E+E
Sbjct: 421 EYQQYQDATADEEEYEDEEE 440

[Close]

BLAST of Cla007342 vs. TrEMBL
Match: A0A0K9RZJ2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016490 PE=3 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 3.7e-253
Identity = 429/446 (96.19%), Postives = 437/446 (97.98%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C EHGIDPTG+Y GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYNGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADE--EYYEEEDEDLEQ 445
           EYQQYQDATADE  EY EEE+ED +Q
Sbjct: 421 EYQQYQDATADEELEYDEEEEEDYQQ 446

[Close]

BLAST of Cla007342 vs. TrEMBL
Match: A9P8S7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 4.5e-251
Identity = 422/441 (95.69%), Postives = 434/441 (98.41%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+CDEHGIDPTGRY G+SDLQLERVN YYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYIGSSDLQLERVNEYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIP+NVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L+MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LAMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDED 442
           EYQQYQDATADEE   E++ED
Sbjct: 421 EYQQYQDATADEEGEYEDEED 441

[Close]

BLAST of Cla007342 vs. TrEMBL
Match: A0A061EQK8_THECC (Tubulin beta 8 OS=Theobroma cacao GN=TCM_021786 PE=3 SV=1)

HSP 1 Score: 873.2 bits (2255), Expect = 1.3e-250
Identity = 418/444 (94.14%), Postives = 434/444 (97.75%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGID TG+Y G SDLQLER+NVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCTEHGIDSTGKYNGDSDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPNG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDEDLEQ 445
           EYQQYQDATADEE YEE++E+ ++
Sbjct: 421 EYQQYQDATADEEEYEEDEEEYQE 444

[Close]

BLAST of Cla007342 vs. TrEMBL
Match: A0A067ESD6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013335mg PE=3 SV=1)

HSP 1 Score: 872.8 bits (2254), Expect = 1.7e-250
Identity = 416/442 (94.12%), Postives = 435/442 (98.42%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C EHGIDPTG+Y G +DLQLER+NVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDEDL 443
           EYQQYQDATA+E+YYE+E+E++
Sbjct: 421 EYQQYQDATAEEDYYEDEEEEV 442

[Close]

BLAST of Cla007342 vs. NCBI nr
Match: gi|195620716|gb|ACG32188.1| (tubulin beta-4 chain [Zea mays])

HSP 1 Score: 882.9 bits (2280), Expect = 2.4e-253
Identity = 425/440 (96.59%), Postives = 435/440 (98.86%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+CDEHGIDPTGRYTG SDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
            KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 MKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDE 441
           EYQQYQDATADEE YE+E+E
Sbjct: 421 EYQQYQDATADEEEYEDEEE 440

[Close]

BLAST of Cla007342 vs. NCBI nr
Match: gi|902236350|gb|KNA24349.1| (hypothetical protein SOVF_016490 [Spinacia oleracea])

HSP 1 Score: 881.7 bits (2277), Expect = 5.3e-253
Identity = 429/446 (96.19%), Postives = 437/446 (97.98%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C EHGIDPTG+Y GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYNGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADE--EYYEEEDEDLEQ 445
           EYQQYQDATADE  EY EEE+ED +Q
Sbjct: 421 EYQQYQDATADEELEYDEEEEEDYQQ 446

[Close]

BLAST of Cla007342 vs. NCBI nr
Match: gi|1021481397|ref|XP_016183844.1| (PREDICTED: tubulin beta-2 chain [Arachis ipaensis])

HSP 1 Score: 875.2 bits (2260), Expect = 5.0e-251
Identity = 420/444 (94.59%), Postives = 435/444 (97.97%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGIDPTGRY G +DLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDTDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRAL+VPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDEDLEQ 445
           EYQQYQDATADE+ YEEE+ED +Q
Sbjct: 421 EYQQYQDATADEDEYEEEEEDYQQ 444

[Close]

BLAST of Cla007342 vs. NCBI nr
Match: gi|118481679|gb|ABK92780.1| (unknown [Populus trichocarpa])

HSP 1 Score: 874.8 bits (2259), Expect = 6.5e-251
Identity = 422/441 (95.69%), Postives = 434/441 (98.41%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+CDEHGIDPTGRY G+SDLQLERVN YYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYIGSSDLQLERVNEYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIP+NVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L+MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LAMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDED 442
           EYQQYQDATADEE   E++ED
Sbjct: 421 EYQQYQDATADEEGEYEDEED 441

[Close]

BLAST of Cla007342 vs. NCBI nr
Match: gi|659069258|ref|XP_008448943.1| (PREDICTED: tubulin beta chain-like [Cucumis melo])

HSP 1 Score: 873.2 bits (2255), Expect = 1.9e-250
Identity = 419/443 (94.58%), Postives = 434/443 (97.97%), Query Frame = 1


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIG+KFWEV+C EHGID TG+Y G SDLQLER+NVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDTTGKYQGDSDLQLERINVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDS+R+G YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYEEEDEDLE 444
           EYQQYQDATA++EYYEEED+D+E
Sbjct: 421 EYQQYQDATAEDEYYEEEDDDVE 443

The following BLAST results are available for this feature:

BLAST of Cla007342 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TBB3_ARATH	1.7e-251	93.74	Tubulin beta-3 chain OS=Arabidopsis thaliana GN=TUBB3 PE=2 SV=2	[more]
TBB2_ARATH	1.7e-251	93.74	Tubulin beta-2 chain OS=Arabidopsis thaliana GN=TUBB2 PE=2 SV=2	[more]
TBB2_PEA	5.0e-251	93.68	Tubulin beta-2 chain (Fragment) OS=Pisum sativum GN=TUBB2 PE=2 SV=1	[more]
TBB1_LUPAL	8.5e-251	94.78	Tubulin beta-1 chain OS=Lupinus albus GN=TUBB1 PE=3 SV=1	[more]
TBB8_ARATH	1.4e-250	93.53	Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TUBB8 PE=2 SV=2	[more]

BLAST of Cla007342 vs. TrEMBL


Match Name	E-value	Identity	Description
B6T505_MAIZE	1.7e-253	96.59	Tubulin beta-4 chain OS=Zea mays PE=2 SV=1	[more]
A0A0K9RZJ2_SPIOL	3.7e-253	96.19	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016490 PE=3 SV=1	[more]
A9P8S7_POPTR	4.5e-251	95.69	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
A0A061EQK8_THECC	1.3e-250	94.14	Tubulin beta 8 OS=Theobroma cacao GN=TCM_021786 PE=3 SV=1	[more]
A0A067ESD6_CITSI	1.7e-250	94.12	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013335mg PE=3 SV=1	[more]

BLAST of Cla007342 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|195620716\|gb\|ACG32188.1\|	2.4e-253	96.59	tubulin beta-4 chain [Zea mays]	[more]
gi\|902236350\|gb\|KNA24349.1\|	5.3e-253	96.19	hypothetical protein SOVF_016490 [Spinacia oleracea]	[more]
gi\|1021481397\|ref\|XP_016183844.1\|	5.0e-251	94.59	PREDICTED: tubulin beta-2 chain [Arachis ipaensis]	[more]
gi\|118481679\|gb\|ABK92780.1\|	6.5e-251	95.69	unknown [Populus trichocarpa]	[more]
gi\|659069258\|ref\|XP_008448943.1\|	1.9e-250	94.58	PREDICTED: tubulin beta chain-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000217	Tubulin
IPR002453	Beta_tubulin
IPR003008	Tubulin_FtsZ_GTPase
IPR008280	Tub_FtsZ_C
IPR013838	Beta-tubulin_BS
IPR017975	Tubulin_CS
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR023123	Tubulin_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process

Vocabulary: **Molecular Function**
Term	Definition
GO:0005200	structural constituent of cytoskeleton
GO:0005525	GTP binding
GO:0003924	GTPase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006833	water transport
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051258	protein polymerization
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009932	cell tip growth
biological_process	GO:0016132	brassinosteroid biosynthetic process
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0006084	acetyl-CoA metabolic process
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005200	structural constituent of cytoskeleton
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla007342	Cla007342	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla007342	Cla007342.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla007342.1.cds1	Cla007342.1.cds1	CDS
Cla007342.1.cds2	Cla007342.1.cds2	CDS
Cla007342.1.cds3	Cla007342.1.cds3	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 132..150 score: 2.1E-105coord: 93..104 score: 2.1E-105coord: 10..30 score: 2.1E-105coord: 151..172 score: 2.1E-105coord: 190..210 score: 2.1E-105coord: 176..189 score: 2.1E-105coord: 370..398 score: 2.1E-105coord: 51..70 score: 2.1E-105coord: 106..130 score: 2.1E
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 5..442 score:
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 265..281 score: 3.1E-119coord: 412..430 score: 3.1E-119coord: 212..224 score: 3.1E-119coord: 329..343 score: 3.1E-119coord: 245..258 score: 3.1E-119coord: 347..370 score: 3.1E-119coord: 41..58 score: 3.1E-119coord: 230..239 score: 3.1E-119coord: 88..99 score: 3.1E-119coord: 108..126 score: 3.1E-119coord: 311..329 score: 3.1E-119coord: 377..388 score: 3.1E-119coord: 152..164 score: 3.1E
IPR003008	Tubulin/FtsZ, GTPase domain	GENE3D	G3DSA:3.40.50.1440		coord: 1..263 score: 9.7E
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 score: 4.5
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..244 score: 1.8
IPR003008	Tubulin/FtsZ, GTPase domain	unknown	SSF52490	Tubulin nucleotide-binding domain-like	coord: 1..243 score: 2.49E
IPR008280	Tubulin/FtsZ, C-terminal	unknown	SSF55307	Tubulin C-terminal domain-like	coord: 244..429 score: 2.08
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4 scor
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146 scor
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	GENE3D	G3DSA:3.30.1330.20		coord: 264..373 score: 2.7
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 261..381 score: 7.1
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 246..383 score: 2.6
IPR023123	Tubulin, C-terminal	GENE3D	G3DSA:1.10.287.600		coord: 374..430 score: 1.5
None	No IPR available	unknown	Coil	Coil	coord: 408..445 scor
None	No IPR available	PANTHER	PTHR11588:SF106	TUBULIN BETA-6 CHAIN	coord: 5..442 score: