Cla006551.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla006551
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	CASP-like protein At3g53850 (AHRD V1 ***- CSPLI_ARATH); contains Interpro domain(s) IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
Location	Chr11 : 1254069 .. 1256099 (-)
Sequence length	456

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGGAGTCCAGGAAGAATAAGCGGGCTGGCTCTCAGATGTGCGCAATGGCTCTTTGCTGCTGTGTCGATTGGGTTTATGGTCACTGCTCCTGGCTTCTTCAACTCCACTGCCTTCTGGTAATAATGCTAACCTATTTCCCATTCTTTTGTTTGACTGAGAAATGTGGACCAGATGCTCATTGACCCCTTGTAATGTGGGTGTTTCTGAAAATAGAGATTCAATTCAATAGGGGAAAGAAACGAAAGTTTCTTACATTATGTTTTTAGTGCGTAGAAAAATTAGAATTCGTATAATTGTATTTATTAACAGATGAAAATGTTGATAATATTGTTTTTCCAGGTCCATTTTTTCTGTACTAATCCCTTGCATCATGCTTGTAACATTTGTTTTCTCTTGTATGTTGGTTTAATTGCTTCATTCTTTTTGACCTTAGGAAATCTTAGCTTGGTGCCATTACATTCCTGAATACTAAATCCGACTGGAAGTCGTGAAAATGTCACTGATCTTAGTCTTAGAATCCACCCTAGCCTTTCAATTTCATTTATCTAGGCCTGCTAATTATTTGCATCTAATCTGCCCATTTGTTTTATCATAATGTTACTGTTTTATGTGGCAAAGGTCCGTCAGTGAACTAAGTGTTTGGACCCCCTGTTCTGTTCTTTGATTTGGAGATAATAATGCAGATACCGGCAATCCCTATTTTCAAAATGGAATTTCAAGTATAGCTGTTTGCATCCTTTACTCTCTCCGTTGAGGATTTTTCACTAAAACTCTTCTTTTTCCATATGAAACAACTTTTCAGAATTTCATTTATGTTCAGGGATGTGTGGTAGTTTGCAACTTACATTACTTAGGGGAGCTGACACGCATGGTTCCTGCCATGTTTGTGAATTGTATTTGGAACTTTTCTGGTGCTGAAATTTGCTAAGAACTCTTGGCTTCAAATGTTAATAAAACTACTTCCTCTGATTTTTACCTCATATTTTCATGGTTTTATGTGTCAGCTTTAACCACTCTTATCTGTAGTTCTATTGCAAAGTGGTGATTCTCGTCTAATTTCGGCTCTATTTAATTCGAGCAGTTACTTAATTGCTTCCATGGGGCTTCAAATTCTTTGGAGTTTTGGACTAGCATGCCTTGATTTGCATGCTTTGCGTATGAAGAAAAGCCTGCGGAATTCAGTTCTGTTGTGCTTATTTGCCATTGGAGATTGGGTGAGTATCTCTGTCCTTGAACTTTCCAAATTCATGAATATCACAATAGAATGAACTCAAACTAGTGAATGTTGGTGATTATTATATTTCTAATTTCTTGAAGTAGTTGCCATTTGCCTTGATTAAGCATTTGTACTACTGTAGTTAAGTGTTTATCAGCATGAACACCCTTTTTCCTTTTTAATGGAATAAACGAACTACCATTGGGAAGAATAAAAGTACACTAGGAGAGAATTGATGTATACATTTTTTCAAGTAACAGAAAGAAGAAAACTTTTATGACAAAAACTTTAGACATGATACCAATGAATTTCACAAGAACTATGACCCACTGTTCCATATGCTAAGACTTTTAAAGTGTAGCTGTCGGTTAAGTAGCATCGTAGTGTCTAAGACGTCAAGCCAGTAGATGGAAGCGTATCCCTGAATAGCATTCAGAGACCCTATGACTTTCCAGTATAGTTTAGCAGCAGTATATCCAGATTTTGAAGGTTCCAAATTATAAAACCAATCAAGAAAAACTATTACCTTATGGAAAGCTGCTTCATCGATGAATCCACTAATTACTTTTAGCATGGCTACCTCATCAATTCATCTACTTGAAATGCAGGTTGTAGCAACGCTTTCACTTGCGGCTGCATCCTCGTCTGCTGGGGTGGCCATTCTGTATTCAAGGGACTTGGACTACTGCAGATCACCTACTAAGATTCCTTGTAGCAAGATGGAAATATCTGTGGCTTTTGCTTTTATCTCATGGTTCCTACTTGCTATATCATCGCTAGTAACATTTTGGCTATTGGGCACAGTATAA

mRNA sequence

ATGTTTGGGAGTCCAGGAAGAATAAGCGGGCTGGCTCTCAGATGTGCGCAATGGCTCTTTGCTGCTGTGTCGATTGGGTTTATGGTCACTGCTCCTGGCTTCTTCAACTCCACTGCCTTCTGTTACTTAATTGCTTCCATGGGGCTTCAAATTCTTTGGAGTTTTGGACTAGCATGCCTTGATTTGCATGCTTTGCGTATGAAGAAAAGCCTGCGGAATTCAGTTCTGTTGTGCTTATTTGCCATTGGAGATTGGGTTGTAGCAACGCTTTCACTTGCGGCTGCATCCTCGTCTGCTGGGGTGGCCATTCTGTATTCAAGGGACTTGGACTACTGCAGATCACCTACTAAGATTCCTTGTAGCAAGATGGAAATATCTGTGGCTTTTGCTTTTATCTCATGGTTCCTACTTGCTATATCATCGCTAGTAACATTTTGGCTATTGGGCACAGTATAA

Coding sequence (CDS)

ATGTTTGGGAGTCCAGGAAGAATAAGCGGGCTGGCTCTCAGATGTGCGCAATGGCTCTTTGCTGCTGTGTCGATTGGGTTTATGGTCACTGCTCCTGGCTTCTTCAACTCCACTGCCTTCTGTTACTTAATTGCTTCCATGGGGCTTCAAATTCTTTGGAGTTTTGGACTAGCATGCCTTGATTTGCATGCTTTGCGTATGAAGAAAAGCCTGCGGAATTCAGTTCTGTTGTGCTTATTTGCCATTGGAGATTGGGTTGTAGCAACGCTTTCACTTGCGGCTGCATCCTCGTCTGCTGGGGTGGCCATTCTGTATTCAAGGGACTTGGACTACTGCAGATCACCTACTAAGATTCCTTGTAGCAAGATGGAAATATCTGTGGCTTTTGCTTTTATCTCATGGTTCCTACTTGCTATATCATCGCTAGTAACATTTTGGCTATTGGGCACAGTATAA

Protein sequence

MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACLDLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPCSKMEISVAFAFISWFLLAISSLVTFWLLGTV

Homology

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BLAST of Cla006551 vs. Swiss-Prot
Match: CSPLI_ARATH (CASP-like protein 5B2 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.0e-46
Identity = 87/151 (57.62%), Postives = 111/151 (73.51%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           + G PG + GL LR  Q   AA SIG MV+A  F   TAFCYLIASMGLQ+LWSFGLACL
Sbjct: 4   LLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGLACL 63

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           D++ALR KK L+N +L+ LF +GDWV A LSLAAA SSAGV +LY +D+ YC + ++ PC
Sbjct: 64  DVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQYPC 123

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
            + E++VA +F++W  +A+SS VTFW+L +V
Sbjct: 124 LRYEVAVALSFVTWIQIAVSSHVTFWILASV 154

[Close]

BLAST of Cla006551 vs. Swiss-Prot
Match: CSPLU_ARATH (CASP-like protein 5B1 OS=Arabidopsis thaliana GN=At5g02060 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.1e-44
Identity = 83/148 (56.08%), Postives = 107/148 (72.30%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           M GSPG +SGL LR  Q   AA SIG MV++  F N TAFC+L+ASMGLQ++WSFGLACL
Sbjct: 4   MIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGLACL 63

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           D++A+R K  LR+ +LL LF +GDWV A L+LAAA SSAGV +L+++D ++CR    + C
Sbjct: 64  DVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPALSC 123

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLL 149
            + +ISV  +F +WFL AISS   FW+L
Sbjct: 124 DRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of Cla006551 vs. Swiss-Prot
Match: CSPLQ_ORYSI (CASP-like protein 5B3 OS=Oryza sativa subsp. indica GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.2e-43
Identity = 83/149 (55.70%), Postives = 109/149 (73.15%), Query Frame = 1


Query: 3   GSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACLDL 62
           GSPG  SG++LR +Q +FA  S+  M +A GF N TAFCYLIASMGLQ+LWSFGLACLD+
Sbjct: 6   GSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGLACLDI 65

Query: 63  HALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPCSK 122
           ++L+ K+ L N VL+ LF +GDWV A LS AAAS+SAGV IL+ RD+ +CR   ++ C +
Sbjct: 66  YSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQLSCGR 125

Query: 123 MEISVAFAFISWFLLAISSLVTFWLLGTV 152
            E+SV  AFI+W  +A S++  FWLL ++
Sbjct: 126 YELSVILAFITWSFIATSAVSMFWLLASL 154

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BLAST of Cla006551 vs. Swiss-Prot
Match: CSPLQ_ORYSJ (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.2e-43
Identity = 83/149 (55.70%), Postives = 109/149 (73.15%), Query Frame = 1


Query: 3   GSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACLDL 62
           GSPG  SG++LR +Q +FA  S+  M +A GF N TAFCYLIASMGLQ+LWSFGLACLD+
Sbjct: 6   GSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGLACLDI 65

Query: 63  HALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPCSK 122
           ++L+ K+ L N VL+ LF +GDWV A LS AAAS+SAGV IL+ RD+ +CR   ++ C +
Sbjct: 66  YSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQLSCGR 125

Query: 123 MEISVAFAFISWFLLAISSLVTFWLLGTV 152
            E+SV  AFI+W  +A S++  FWLL ++
Sbjct: 126 YELSVILAFITWSFIATSAVSMFWLLASL 154

[Close]

BLAST of Cla006551 vs. Swiss-Prot
Match: CSPLI_MAIZE (CASP-like protein 5B3 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.8e-43
Identity = 84/146 (57.53%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 3   GSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACLDL 62
           GSPG  SG+ALR +Q + A  S+G M TA GF N TAFCYLIASMGLQ+LWSFGLACLD+
Sbjct: 6   GSPGTWSGMALRLSQCVSAGASMGAMATAYGFSNYTAFCYLIASMGLQLLWSFGLACLDV 65

Query: 63  HALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPCSK 122
           ++L+ K+ L N VL+ LF +GDWV A LS AAAS+SAGV IL+ RD+ +CR   ++ C +
Sbjct: 66  YSLKTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQLSCGR 125

Query: 123 MEISVAFAFISWFLLAISSLVTFWLL 149
             +SV  AFI+W  +A S++  FWLL
Sbjct: 126 YALSVVLAFITWSFIATSAVSMFWLL 151

[Close]

BLAST of Cla006551 vs. TrEMBL
Match: A0A0A0K7M5_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_6G008760 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-74
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           MFGSPGR+SGL LRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL
Sbjct: 74  MFGSPGRMSGLVLRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 133

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALRMKKSLRNSVLLCLFAIGDWVV+TLSLAAASSSAGVAILYSRDLDYCRSP  I C
Sbjct: 134 DLHALRMKKSLRNSVLLCLFAIGDWVVSTLSLAAASSSAGVAILYSRDLDYCRSPPYISC 193

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           SK+EISVAFAFISWFLL +SSLVTFWLLGTV
Sbjct: 194 SKIEISVAFAFISWFLLGLSSLVTFWLLGTV 224

[Close]

BLAST of Cla006551 vs. TrEMBL
Match: W9RR72_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_009892 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 8.1e-59
Identity = 113/151 (74.83%), Postives = 126/151 (83.44%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           MFGSPG++SGLALR  Q  FAA SIG M++APGFFNSTAFCYLIASMGLQ+LWSFGLACL
Sbjct: 4   MFGSPGKVSGLALRIGQCSFAAASIGTMISAPGFFNSTAFCYLIASMGLQVLWSFGLACL 63

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALR K+SL N VL+ LF +GDWV A LSL AA SSAGV +LYS+DL YC SP  +PC
Sbjct: 64  DLHALRSKRSLHNPVLVSLFVVGDWVTAILSLGAACSSAGVTVLYSKDLGYCNSPPHLPC 123

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           S  +ISVA AFISWFLLA+SSLV FWLLG V
Sbjct: 124 STFQISVALAFISWFLLAVSSLVMFWLLGAV 154

[Close]

BLAST of Cla006551 vs. TrEMBL
Match: M5XE04_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa012782mg PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.2e-58
Identity = 111/151 (73.51%), Postives = 129/151 (85.43%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           +FGSPG++SGLALR  Q  FAA SIG MV+A GFFNSTAFCYLIASMGLQ+LWS GLACL
Sbjct: 4   VFGSPGKVSGLALRIGQCSFAAASIGVMVSAHGFFNSTAFCYLIASMGLQVLWSLGLACL 63

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALR K+SL+N VL+ LF +GDWV A LSLAAA SSAGV +LYSRDL+YC  P ++PC
Sbjct: 64  DLHALRSKRSLQNPVLVSLFVVGDWVTAILSLAAACSSAGVTVLYSRDLNYCGPPAQLPC 123

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           S+ +I+VAFAFISWFLLA+SS+V FWLLG V
Sbjct: 124 SRFQIAVAFAFISWFLLAVSSIVMFWLLGAV 154

[Close]

BLAST of Cla006551 vs. TrEMBL
Match: A0A061FTJ9_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_042690 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-56
Identity = 111/151 (73.51%), Postives = 126/151 (83.44%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           +FGSPG++SGL LR  Q  FAA SIG MV+APGFFNSTAFCYLIASMGLQ+LWSFGLACL
Sbjct: 3   LFGSPGKLSGLLLRVGQCSFAAASIGVMVSAPGFFNSTAFCYLIASMGLQVLWSFGLACL 62

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALR K++L+N +L+ LF +GDWV A LSLAAA SSAGV +LYSRDL YCRSP  IPC
Sbjct: 63  DLHALRSKRNLQNPILVSLFVVGDWVTAILSLAAACSSAGVTVLYSRDLGYCRSP-HIPC 122

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           S+ + S+  AFISWFLLAISS VTFWLL  V
Sbjct: 123 SRFQASIFLAFISWFLLAISSHVTFWLLAAV 152

[Close]

BLAST of Cla006551 vs. TrEMBL
Match: A0A0D2UYG8_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_011G269200 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 7.1e-55
Identity = 110/151 (72.85%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           +FGSPG++SGL LR  Q   AA SIGFMV+A GFFNSTAFCYLIASMG+Q+LWSFGLACL
Sbjct: 3   LFGSPGKLSGLLLRIGQCFSAAASIGFMVSAHGFFNSTAFCYLIASMGIQVLWSFGLACL 62

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           D HALR K +L N VL+ LF IGDWV A LSLAAA SSAGV +LYSRDL YCRSP +IPC
Sbjct: 63  DFHALRSKTNLHNPVLVSLFVIGDWVTAILSLAAACSSAGVTVLYSRDLGYCRSP-QIPC 122

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           S  + S+ FAFISWFLLA+SS VTFWLL  V
Sbjct: 123 SHFKASILFAFISWFLLAVSSHVTFWLLAAV 152

[Close]

BLAST of Cla006551 vs. NCBI nr
Match: gi|449441364|ref|XP_004138452.1| (PREDICTED: CASP-like protein 5B1 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-74
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           MFGSPGR+SGL LRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL
Sbjct: 1   MFGSPGRMSGLVLRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALRMKKSLRNSVLLCLFAIGDWVV+TLSLAAASSSAGVAILYSRDLDYCRSP  I C
Sbjct: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVSTLSLAAASSSAGVAILYSRDLDYCRSPPYISC 120

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           SK+EISVAFAFISWFLL +SSLVTFWLLGTV
Sbjct: 121 SKIEISVAFAFISWFLLGLSSLVTFWLLGTV 151

[Close]

BLAST of Cla006551 vs. NCBI nr
Match: gi|700190541|gb|KGN45745.1| (hypothetical protein Csa_6G008760 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-74
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           MFGSPGR+SGL LRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL
Sbjct: 74  MFGSPGRMSGLVLRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 133

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALRMKKSLRNSVLLCLFAIGDWVV+TLSLAAASSSAGVAILYSRDLDYCRSP  I C
Sbjct: 134 DLHALRMKKSLRNSVLLCLFAIGDWVVSTLSLAAASSSAGVAILYSRDLDYCRSPPYISC 193

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           SK+EISVAFAFISWFLL +SSLVTFWLLGTV
Sbjct: 194 SKIEISVAFAFISWFLLGLSSLVTFWLLGTV 224

[Close]

BLAST of Cla006551 vs. NCBI nr
Match: gi|659081562|ref|XP_008441395.1| (PREDICTED: CASP-like protein At5g02060 [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-74
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           MFGSPGR+SGL LRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL
Sbjct: 1   MFGSPGRMSGLVLRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALRMKKSLRNSVLLCLFAIGDWVV+TLSLAAASSSAGVAILYSRDLDYCRSP  I C
Sbjct: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVSTLSLAAASSSAGVAILYSRDLDYCRSPPYISC 120

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           SK+EISVAFAFISWFLL +SSLVTFWLLGTV
Sbjct: 121 SKIEISVAFAFISWFLLVLSSLVTFWLLGTV 151

[Close]

BLAST of Cla006551 vs. NCBI nr
Match: gi|703133569|ref|XP_010105424.1| (hypothetical protein L484_009892 [Morus notabilis])

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58
Identity = 113/151 (74.83%), Postives = 126/151 (83.44%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           MFGSPG++SGLALR  Q  FAA SIG M++APGFFNSTAFCYLIASMGLQ+LWSFGLACL
Sbjct: 4   MFGSPGKVSGLALRIGQCSFAAASIGTMISAPGFFNSTAFCYLIASMGLQVLWSFGLACL 63

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALR K+SL N VL+ LF +GDWV A LSL AA SSAGV +LYS+DL YC SP  +PC
Sbjct: 64  DLHALRSKRSLHNPVLVSLFVVGDWVTAILSLGAACSSAGVTVLYSKDLGYCNSPPHLPC 123

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           S  +ISVA AFISWFLLA+SSLV FWLLG V
Sbjct: 124 STFQISVALAFISWFLLAVSSLVMFWLLGAV 154

[Close]

BLAST of Cla006551 vs. NCBI nr
Match: gi|596009796|ref|XP_007218544.1| (hypothetical protein PRUPE_ppa012782mg [Prunus persica])

HSP 1 Score: 231.9 bits (590), Expect = 7.5e-58
Identity = 111/151 (73.51%), Postives = 129/151 (85.43%), Query Frame = 1


Query: 1   MFGSPGRISGLALRCAQWLFAAVSIGFMVTAPGFFNSTAFCYLIASMGLQILWSFGLACL 60
           +FGSPG++SGLALR  Q  FAA SIG MV+A GFFNSTAFCYLIASMGLQ+LWS GLACL
Sbjct: 4   VFGSPGKVSGLALRIGQCSFAAASIGVMVSAHGFFNSTAFCYLIASMGLQVLWSLGLACL 63

Query: 61  DLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLDYCRSPTKIPC 120
           DLHALR K+SL+N VL+ LF +GDWV A LSLAAA SSAGV +LYSRDL+YC  P ++PC
Sbjct: 64  DLHALRSKRSLQNPVLVSLFVVGDWVTAILSLAAACSSAGVTVLYSRDLNYCGPPAQLPC 123

Query: 121 SKMEISVAFAFISWFLLAISSLVTFWLLGTV 152
           S+ +I+VAFAFISWFLLA+SS+V FWLLG V
Sbjct: 124 SRFQIAVAFAFISWFLLAVSSIVMFWLLGAV 154

The following BLAST results are available for this feature:

BLAST of Cla006551 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLI_ARATH	5.0e-46	57.62	CASP-like protein 5B2 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1	[more]
CSPLU_ARATH	8.1e-44	56.08	CASP-like protein 5B1 OS=Arabidopsis thaliana GN=At5g02060 PE=2 SV=1	[more]
CSPLQ_ORYSI	5.2e-43	55.70	CASP-like protein 5B3 OS=Oryza sativa subsp. indica GN=OsI_30532 PE=3 SV=1	[more]
CSPLQ_ORYSJ	5.2e-43	55.70	CASP-like protein 5B3 OS=Oryza sativa subsp. japonica GN=Os09g0249400 PE=2 SV=1	[more]
CSPLI_MAIZE	6.8e-43	57.53	CASP-like protein 5B3 OS=Zea mays PE=2 SV=1	[more]

BLAST of Cla006551 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7M5_CUCSA	1.4e-74	94.04	CASP-like protein OS=Cucumis sativus GN=Csa_6G008760 PE=3 SV=1	[more]
W9RR72_9ROSA	8.1e-59	74.83	CASP-like protein OS=Morus notabilis GN=L484_009892 PE=3 SV=1	[more]
M5XE04_PRUPE	5.2e-58	73.51	CASP-like protein OS=Prunus persica GN=PRUPE_ppa012782mg PE=3 SV=1	[more]
A0A061FTJ9_THECC	2.9e-56	73.51	CASP-like protein OS=Theobroma cacao GN=TCM_042690 PE=3 SV=1	[more]
A0A0D2UYG8_GOSRA	7.1e-55	72.85	CASP-like protein OS=Gossypium raimondii GN=B456_011G269200 PE=3 SV=1	[more]

BLAST of Cla006551 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441364\|ref\|XP_004138452.1\|	2.0e-74	94.04	PREDICTED: CASP-like protein 5B1 [Cucumis sativus]	[more]
gi\|700190541\|gb\|KGN45745.1\|	2.0e-74	94.04	hypothetical protein Csa_6G008760 [Cucumis sativus]	[more]
gi\|659081562\|ref\|XP_008441395.1\|	2.0e-74	94.04	PREDICTED: CASP-like protein At5g02060 [Cucumis melo]	[more]
gi\|703133569\|ref\|XP_010105424.1\|	1.2e-58	74.83	hypothetical protein L484_009892 [Morus notabilis]	[more]
gi\|596009796\|ref\|XP_007218544.1\|	7.5e-58	73.51	hypothetical protein PRUPE_ppa012782mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla006551	Cla006551	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla006551	Cla006551.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla006551.1.cds3	Cla006551.1.cds3	CDS
Cla006551.1.cds2	Cla006551.1.cds2	CDS
Cla006551.1.cds1	Cla006551.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 4..136 score: 3.0
None	No IPR available	PANTHER	PTHR32021	FAMILY NOT NAMED	coord: 1..151 score: 6.1
None	No IPR available	PANTHER	PTHR32021:SF0	SUBFAMILY NOT NAMED	coord: 1..151 score: 6.1