Cla006335.1 (mRNA) Watermelon (97103) v1

Overview
NameCla006335
TypemRNA
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionF-box family protein (AHRD V1 ***- B9HP23_POPTR); contains Interpro domain(s) IPR001810 Cyclin-like F-box
LocationChr3 : 22498330 .. 22499454 (-)
Sequence length1125
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCAACCAAAAATCAAATTCAAATTCCAATTCAAGATCGAGAAGAAGAACATGTAGAACAAGACTTTTTTGATCTTCTACCTGATGCAATTCTTCATCAAATCTTCACCAAATTAATCGACGCTCGCTCTCTAATTCGATGCCTCGCCGTCTCCAAACGATTCGCCTCTCTCATTTCGCAATCCGACGCCGTTTTCCTCGCCATTCCTCGTCTTCTCTTCGATTCCAAGCACAAATCCAGAATCACTCCTCGCTCCCTGTCCAATTCCACGATTAGGTTTTTCTTTCGTAAGTTTCTGTTTACGCCTTTTCGTTTAATTCGGCGTCTGATTACTCGTACTTCGAAATCCAGTTCTGGATTTGGCGATTGGTACTACTGGCCAAGCGTTGCGTTGAAGGAATTTAAAGGAATTAAGTTCGTTCATATGGAACTCCCTTGCTGCGGCGATGAAATCGGTTCAAATCACGGCGGCGGTGCGGTACTCAAATGGAAAGCCGAGTTCGGGGCGGAATTGAAGAGTTGCGTTGTTCTTGGAGCGTCGTCTTTACGAAGGAAGTCGATTGTTGAATCTGAATTAGAGGTTAAAGAAACAGAGGAAAATCGATTAGAAGTAGAATCGGAATCGGAAATGGGAGATGAAGAGCTTAAGTTACGAATTGTATGGACGATTTCATCGCTAATTGCGGCTTCCATGAGACATTACTTAGTGAAACAGATGGTGAATGATTTTCCGTTGTTACAAACAGTTTTGATTACCGATTCAACGAAACAAGGAAGGCTGTGTATGGAGGAGAAACAAGTGATGGAACTCAGAGAATCGATGAAATCATCTTCCAGTTCTTCGATTGGAGCTTCGGTAGAGAGGACTGTGATTCCAGACCTGAAGATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGGCCGGATTCGTAATGACTGCGGCGACGCTGGTGGTGATCCGGCCCAGTGGTGGAGGTATGGGTTTGGATGGATTAGATTCAATAGGAGATGATTTTGATGGTGAAGAAGAGGAAAAACTTGGAGTTTATGGAGAAGCTGTGAGGAAATTGTTGAAGTTGAAGAGAAATTATGCTTTGGAGGTAAATTCTTTCTGA

mRNA sequence

ATGGATCCAACCAAAAATCAAATTCAAATTCCAATTCAAGATCGAGAAGAAGAACATGTAGAACAAGACTTTTTTGATCTTCTACCTGATGCAATTCTTCATCAAATCTTCACCAAATTAATCGACGCTCGCTCTCTAATTCGATGCCTCGCCGTCTCCAAACGATTCGCCTCTCTCATTTCGCAATCCGACGCCGTTTTCCTCGCCATTCCTCGTCTTCTCTTCGATTCCAAGCACAAATCCAGAATCACTCCTCGCTCCCTGTCCAATTCCACGATTAGGTTTTTCTTTCGTAAGTTTCTGTTTACGCCTTTTCGTTTAATTCGGCGTCTGATTACTCGTACTTCGAAATCCAGTTCTGGATTTGGCGATTGGTACTACTGGCCAAGCGTTGCGTTGAAGGAATTTAAAGGAATTAAGTTCGTTCATATGGAACTCCCTTGCTGCGGCGATGAAATCGGTTCAAATCACGGCGGCGGTGCGGTACTCAAATGGAAAGCCGAGTTCGGGGCGGAATTGAAGAGTTGCGTTGTTCTTGGAGCGTCGTCTTTACGAAGGAAGTCGATTGTTGAATCTGAATTAGAGGTTAAAGAAACAGAGGAAAATCGATTAGAAGTAGAATCGGAATCGGAAATGGGAGATGAAGAGCTTAAGTTACGAATTGTATGGACGATTTCATCGCTAATTGCGGCTTCCATGAGACATTACTTAGTGAAACAGATGGTGAATGATTTTCCGTTGTTACAAACAGTTTTGATTACCGATTCAACGAAACAAGGAAGGCTGTGTATGGAGGAGAAACAAGTGATGGAACTCAGAGAATCGATGAAATCATCTTCCAGTTCTTCGATTGGAGCTTCGGTAGAGAGGACTGTGATTCCAGACCTGAAGATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGGCCGGATTCGTAATGACTGCGGCGACGCTGGTGGTGATCCGGCCCAGTGGTGGAGGTATGGGTTTGGATGGATTAGATTCAATAGGAGATGATTTTGATGGTGAAGAAGAGGAAAAACTTGGAGTTTATGGAGAAGCTGTGAGGAAATTGTTGAAGTTGAAGAGAAATTATGCTTTGGAGGTAAATTCTTTCTGA

Coding sequence (CDS)

ATGGATCCAACCAAAAATCAAATTCAAATTCCAATTCAAGATCGAGAAGAAGAACATGTAGAACAAGACTTTTTTGATCTTCTACCTGATGCAATTCTTCATCAAATCTTCACCAAATTAATCGACGCTCGCTCTCTAATTCGATGCCTCGCCGTCTCCAAACGATTCGCCTCTCTCATTTCGCAATCCGACGCCGTTTTCCTCGCCATTCCTCGTCTTCTCTTCGATTCCAAGCACAAATCCAGAATCACTCCTCGCTCCCTGTCCAATTCCACGATTAGGTTTTTCTTTCGTAAGTTTCTGTTTACGCCTTTTCGTTTAATTCGGCGTCTGATTACTCGTACTTCGAAATCCAGTTCTGGATTTGGCGATTGGTACTACTGGCCAAGCGTTGCGTTGAAGGAATTTAAAGGAATTAAGTTCGTTCATATGGAACTCCCTTGCTGCGGCGATGAAATCGGTTCAAATCACGGCGGCGGTGCGGTACTCAAATGGAAAGCCGAGTTCGGGGCGGAATTGAAGAGTTGCGTTGTTCTTGGAGCGTCGTCTTTACGAAGGAAGTCGATTGTTGAATCTGAATTAGAGGTTAAAGAAACAGAGGAAAATCGATTAGAAGTAGAATCGGAATCGGAAATGGGAGATGAAGAGCTTAAGTTACGAATTGTATGGACGATTTCATCGCTAATTGCGGCTTCCATGAGACATTACTTAGTGAAACAGATGGTGAATGATTTTCCGTTGTTACAAACAGTTTTGATTACCGATTCAACGAAACAAGGAAGGCTGTGTATGGAGGAGAAACAAGTGATGGAACTCAGAGAATCGATGAAATCATCTTCCAGTTCTTCGATTGGAGCTTCGGTAGAGAGGACTGTGATTCCAGACCTGAAGATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGGCCGGATTCGTAATGACTGCGGCGACGCTGGTGGTGATCCGGCCCAGTGGTGGAGGTATGGGTTTGGATGGATTAGATTCAATAGGAGATGATTTTGATGGTGAAGAAGAGGAAAAACTTGGAGTTTATGGAGAAGCTGTGAGGAAATTGTTGAAGTTGAAGAGAAATTATGCTTTGGAGGTAAATTCTTTCTGA

Protein sequence

MDPTKNQIQIPIQDREEEHVEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDSKHKSRITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEFKGIKFVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEENRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLVVIRPSGGGMGLDGLDSIGDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVNSF
Homology
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BLAST of Cla006335 vs. Swiss-Prot
Match: FB237_ARATH (F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.2e-50
Identity = 145/383 (37.86%), Postives = 206/383 (53.79%), Query Frame = 1 

Query: 18  EHVEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDS 77
           E  E D FD LPD+IL  IF  + D ++L RC  VSKRF SLI Q + VF+ +  ++ D 
Sbjct: 18  EPQEIDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDD 77

Query: 78  KHKSRIT--PRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSS------------SGFG 137
              S ++  PRS S ++      + +F P + + + + R+  SS            SG  
Sbjct: 78  DSSSLLSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGD 137

Query: 138 DW--------YYWPSVALKEFKGIKFVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKS 197
           D         ++ P+  LK F  IKF+ +ELP    E+G + G   +LKW+AEFG+ L++
Sbjct: 138 DGEIEQGGVTHHSPTQVLKNFDEIKFLKIELP--SGELGIDDG--VLLKWRAEFGSTLEN 197

Query: 198 CVVLGASSL----RRKSIVESELEVKETEENRLEVESESEMGDEELKLRIVWTISSLIAA 257
           CV+LGASS+           S   V   E+N    ES    G   LKLR+VWTISSLIAA
Sbjct: 198 CVILGASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGG--LKLRVVWTISSLIAA 257

Query: 258 SMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERT 317
           S RHYL++ ++ +   L ++++TD   QG LCM   Q+ ELR    S+SS+S     +RT
Sbjct: 258 SARHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSAS-----KRT 317

Query: 318 VIPDLKMKMWHVPVLDLPAAGFVMTAATLVVIRPSGGGMGLDGLDSIGDDFDGEEEEKLG 375
           ++P L M++W+ P L+LP  G V+  ATLV IRPS     +  +  +   FD        
Sbjct: 318 LVPALNMRLWYAPSLELP-DGTVLKGATLVAIRPSESKKEVCDVSWVSSAFDEP------ 377

[Close]
BLAST of Cla006335 vs. Swiss-Prot
Match: FB19_ARATH (F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-48
Identity = 138/378 (36.51%), Postives = 206/378 (54.50%), Query Frame = 1 

Query: 23  DFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDS----- 82
           D FDLLPD++L  IF K+ D + L RC  VS+RF SL+   + V + +  ++ D      
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 83  --KHKSRITPRSLSNS-----TIRFFFRKF---LFTPFRLIRRLITRTSKSSS------- 142
              H+  +   S+S++     +    FR     +F PF+++ +++     SSS       
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSA 143

Query: 143 ---GFGDWYYWPSVALKEFKGIKFVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCV 202
                G  ++ P+  LK F  I+F+ +ELP    E+G   G   +LKW+A+FG+ L +C+
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPT--GELGIEDG--ILLKWRADFGSTLDNCM 203

Query: 203 VLGASS-LRRKSIVESELEVKETEENRLEVESESEMGDEELKLRIVWTISSLIAASMRHY 262
           +LGASS ++  S+   E  V E   N      ES   +  LKLR+VWTISSLIAAS RHY
Sbjct: 204 ILGASSVIQSNSVKNHENSVDEDNGNI----PESFYTNGGLKLRVVWTISSLIAASARHY 263

Query: 263 LVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDL 322
           L++ ++N+   L  ++++D+  QG LCM  +Q+ ELR +  S+SS+S     +RT++P L
Sbjct: 264 LLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSAS-----KRTLVPAL 323

Query: 323 KMKMWHVPVLDLPAAGFVMTAATLVVIRPSGGGMGLDGLDSIGDDFDGEEEEKLGVYGEA 375
            M++W+ P LDLP  G V+  ATLV IRPS     +     + D F    EE  G     
Sbjct: 324 NMRLWYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDASWLSDAF----EEPFG----T 379

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BLAST of Cla006335 vs. Swiss-Prot
Match: FB285_ARATH (F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-47
Identity = 138/404 (34.16%), Postives = 207/404 (51.24%), Query Frame = 1 

Query: 12  IQDREEEHVEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIP 71
           I     + +E D FD LPD+IL  +F K+ D ++L RC  VS+RF SL+ Q D V + + 
Sbjct: 14  IHPEPPQTLEIDHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVD 73

Query: 72  RLLFDSKHKSRITPRSLSNSTIRFFFRKF------LFTPFRLIRRLI-TRTSKSSSGF-- 131
            ++ D    S  + +S S S+   F   F      +  P + + + + T+ S SS G   
Sbjct: 74  CVISDDDSSSLSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSSSSCGGSG 133

Query: 132 --------------------GDWYYWPSVALKEFKGIKFVHMELPCCGDEIGSNHGGGAV 191
                               G  ++ P+  LK F  I+++ +ELP    E+G + G   +
Sbjct: 134 SSSSSLSISGDDDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELP--SGELGIDDG--VL 193

Query: 192 LKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEENRLEVESESEMGDEE------ 251
           LKW+AEFG+ L +CV+LGASS+    I  + + V +  +    VE+     D+       
Sbjct: 194 LKWRAEFGSTLDNCVILGASSV----IPPNPMRVSQACDTTTVVEAPGSGSDDNGSIPES 253

Query: 252 ------LKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVM 311
                 LKLR+VWTISSLIAAS RHYL++ ++ +   L ++++TDS  QG LCM   Q+ 
Sbjct: 254 FYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLE 313

Query: 312 ELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLVVIRPSGGGM 371
           ELR    ++SS+S     +RT++P L M++W+ P L+LP  G V+  ATLV IRPS    
Sbjct: 314 ELRVKPLAASSAS-----KRTLVPALNMRLWYAPTLELP-DGTVLKGATLVAIRPSESKK 373

Query: 372 GLDGLDSIGDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVNSF 375
            +  +  +   F    EE      E   K+L  +R Y LE+NSF
Sbjct: 374 EVSDISWVSSAF----EEPY----ETAAKMLVKRRTYCLEMNSF 395

[Close]
BLAST of Cla006335 vs. Swiss-Prot
Match: FB91_ARATH (F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.0e-44
Identity = 121/352 (34.38%), Postives = 193/352 (54.83%), Query Frame = 1 

Query: 23  DFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDSKHKSR 82
           D FD +PD ++  I  ++ D ++LIRC +VSKRF SL +QS+++ L + ++L  ++  S 
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61

Query: 83  ITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEFKGIKFV 142
           I      +S I  FFR    +   L+  + ++ + S          P+  L  F+ I+ +
Sbjct: 62  I------DSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNL 121

Query: 143 HMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEEN 202
            +EL   G ++    G  A +KWKAEFG  LKSCV++   S    +   +  E     + 
Sbjct: 122 EVEL--YGGDVKLEKG--AAVKWKAEFGKTLKSCVIVAFRSATVNT--SAATEAAAVVDG 181

Query: 203 RLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRL 262
            +E +SE   G   LK R+VWTIS+L+AAS RHYL++ +V D   ++ +++ DS  +G +
Sbjct: 182 VVESDSEFVCG---LKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTV 241

Query: 263 CMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLVV 322
            M+   + E RE+     +       ERTV+P ++M M H P L L  +G  + AATLVV
Sbjct: 242 VMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRHAPSLML-KSGICLEAATLVV 301

Query: 323 IRPSGGGMGLDGLDSIGDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVNSF 375
           +RP+G     + ++ + + F G+ ++ +  YGEAV  LLK +RN  LE+NSF
Sbjct: 302 VRPTGVASDDNDVELVTEAFAGDGDDCM--YGEAVTALLKRRRN-VLEMNSF 334

[Close]
BLAST of Cla006335 vs. Swiss-Prot
Match: FB303_ARATH (F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-41
Identity = 127/354 (35.88%), Postives = 191/354 (53.95%), Query Frame = 1 

Query: 23  DFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDSKHKSR 82
           D FD LPD I+  I  K+ D ++L+RC ++SKRF SL+ QS+++ L +   + DS   + 
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSPVVTS 61

Query: 83  ITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEFKGIKFV 142
           I  RSL N  +    +           + IT T+ S S        P   L  F  I+ +
Sbjct: 62  IF-RSLFNGLVSLLSKP---------AKPITITTLSPS-------LPFKILSRFDRIRNL 121

Query: 143 HMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEEN 202
            +ELP  G ++    G  A +KWKAEFG  LKSCV++   + R    V S + V      
Sbjct: 122 DVELP--GGDVKLEKG--AAVKWKAEFGKTLKSCVIV---AFRSAGTVSSPVAV------ 181

Query: 203 RLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRL 262
             E ES++E     LK R+VWTIS+L+AAS RHYL++++V +   ++++++ D  ++G +
Sbjct: 182 --EGESDAEFVTG-LKTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREGTV 241

Query: 263 CMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLVV 322
            M E+ + ELR +             +R+V+P ++M M H P L L  +G  + +ATLV+
Sbjct: 242 VMNEEGLKELRNTEARVEDEERVVKNKRSVVPSVRMSMRHAPSLKL-KSGICLESATLVI 301

Query: 323 IRPSGGGMGLDGLDSIGDDFDGEEEEKLG--VYGEAVRKLLKLKRNYALEVNSF 375
           +RPSG          +GDD +   E  +G  +YGEAV  LLK K+N ALE+NSF
Sbjct: 302 VRPSGADF------EVGDDAELATEAFVGDCMYGEAVVALLKCKKN-ALEMNSF 314

[Close]
BLAST of Cla006335 vs. TrEMBL
Match: A0A0A0M086_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G617380 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 8.5e-150
Identity = 283/376 (75.27%), Postives = 310/376 (82.45%), Query Frame = 1 

Query: 1   MDPTKNQIQIPIQDREEEHVEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLI 60
           MDPT NQ             +QD FDLLPD+ILH IFTKL  A SLIRCLAVSKRFASLI
Sbjct: 1   MDPTNNQ-------------QQDLFDLLPDSILHLIFTKLTHAPSLIRCLAVSKRFASLI 60

Query: 61  SQSDAVFLAIPRLLFDSKHKSRITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSS 120
            QSD+VFL+IP LL     KSR TPRS +     FF RKF F PFR IRRLIT TS+S+ 
Sbjct: 61  PQSDSVFLSIPPLLLTPNPKSRTTPRSPT-----FFLRKFFFNPFRFIRRLITHTSQSTP 120

Query: 121 GFGDWYYWPSVALKEFKGIKFVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLG 180
            F DWYYWPSVALKE KG + +H++LPCCGDEIGSNH GGA+LKWKAEFG+ELK+CVVLG
Sbjct: 121 RFTDWYYWPSVALKELKGFQSLHIQLPCCGDEIGSNHNGGALLKWKAEFGSELKTCVVLG 180

Query: 181 ASSLRRKSIVESELEV--KETEENRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLV 240
           ASSLRRKS+VESE     +ETEENRL  ESESEMGD ELK RIVWTISSLIAASMRHYLV
Sbjct: 181 ASSLRRKSVVESESSAVKEETEENRLHAESESEMGDGELKSRIVWTISSLIAASMRHYLV 240

Query: 241 KQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKM 300
           KQMVNDFPLL+TVLITDS KQGRLCMEE++VMELRESM+ SSSS     VER+VIPDLKM
Sbjct: 241 KQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMQLSSSS----YVERSVIPDLKM 300

Query: 301 KMWHVPVLDLPAAGFVMTAATLVVIRPSGGGMGLDGLDSIGDDFDGEEEEKLGVYGEAVR 360
           KMW+VPVLDLP AGFVMTAATLVVI+PSGGGMGLDGL+ IGD+FD E+ EK GVYGEAVR
Sbjct: 301 KMWYVPVLDLPEAGFVMTAATLVVIKPSGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVR 354

Query: 361 KLLKLKRNYALEVNSF 375
           KL+KLKRNYALEVNSF
Sbjct: 361 KLMKLKRNYALEVNSF 354

[Close]
BLAST of Cla006335 vs. TrEMBL
Match: W9SFR5_9ROSA (F-box protein OS=Morus notabilis GN=L484_000159 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 9.6e-69
Identity = 152/362 (41.99%), Postives = 233/362 (64.36%), Query Frame = 1 

Query: 22  QDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDSKHKS 81
           +D+FD LPD +LH IF K++DA++L+RCL VSKRF SLISQ+DAVFL +P      K+K 
Sbjct: 21  RDYFDQLPDPLLHLIFNKILDAKTLVRCLPVSKRFNSLISQTDAVFLPLP----PQKNKP 80

Query: 82  RITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEFKGIKF 141
               RS                 FR + +++++  +++     +Y+ P   LK F  +K 
Sbjct: 81  AKLVRSF----------------FRFLHKIVSKKPRNAHR-NVFYHSPCEVLKGFNELKS 140

Query: 142 VHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEE 201
           +H+ELP C  E+G   G  ++LKWKAEFG+ L++CV+LGA+SL+++ I +++   KE + 
Sbjct: 141 LHLELPRCKGEMGFA-GKDSLLKWKAEFGSNLRNCVILGANSLKKEKIAKNDNLAKEND- 200

Query: 202 NRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGR 261
                 +++ + D+ELKLRIVW IS LIAAS RHYL+K++V+DFP L  V+++D  ++G+
Sbjct: 201 ------NQNALSDDELKLRIVWMISCLIAASARHYLLKRVVSDFPTLTNVVVSDGDRRGK 260

Query: 262 LCMEEKQVMELRESMKSSSSSSIG--ASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAAT 321
           + +  +++ ELR    S  SS +   +S+ER++IPDL MKMW+VP + LP  G+V+  AT
Sbjct: 261 VLIGGEELAELRSESVSGDSSDVALESSLERSLIPDLGMKMWYVPRMVLPTCGWVLEGAT 320

Query: 322 LVVIRPSGGGM---GLDGLDSI----GDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVN 375
           LVVI+P   G+   G DG D      G   DG+EEE+  +  EAVR+++K+K+ Y +E+ 
Sbjct: 321 LVVIKPLDRGVIGKGSDGCDCDLLVGGGGLDGDEEER-EILDEAVRQMVKMKKTYVMEMT 352

[Close]
BLAST of Cla006335 vs. TrEMBL
Match: B9SYQ6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0063160 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.1e-68
Identity = 155/354 (43.79%), Postives = 227/354 (64.12%), Query Frame = 1 

Query: 22  QDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDSKHKS 81
           +DFFD LPD++L  IF KL D+RSL +CL VSKRF+SL+ Q+D VFL+IP      K KS
Sbjct: 12  EDFFDPLPDSLLLLIFNKLCDSRSLAQCLLVSKRFSSLVFQADNVFLSIPT----PKPKS 71

Query: 82  RITPRS-LSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEFKGIK 141
             + R+  S + +R    KF+  P +    +    S  +SG    YY P+  LK FK +K
Sbjct: 72  ASSHRNRASRNLLRTLVHKFIAKPLQFFPCVAAPKSPGNSGCIS-YYSPNEVLKHFKNVK 131

Query: 142 FVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETE 201
            +H+++P   ++IG      ++LKW+AEF  ELK+CVVL A+S++  +  ++   +   E
Sbjct: 132 SLHIKVPFQCEKIGLECSN-SLLKWQAEFSGELKNCVVLSATSIQECN--KNHCCINHVE 191

Query: 202 ENRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQG 261
           E          + D+ELKLRIV TIS LIAAS RH L+KQ++ +  +L+ V I+D  KQG
Sbjct: 192 EGGGGGTVGQILNDDELKLRIVTTISCLIAASARHLLLKQILAEHHMLENVTISDVNKQG 251

Query: 262 RLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATL 321
           RLC+ + Q++E+R +MKS + S   +S+ERT +PDL MK+W+VPVL+LPA G++M  ATL
Sbjct: 252 RLCVGKDQIVEMRNAMKSLAVSESSSSIERTPVPDLSMKLWYVPVLELPATGYLMKGATL 311

Query: 322 VVIRPSGGGMGLDGLDSIGDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVNSF 375
           VVI+P  G        S   DFDG++ EK+  + EA R ++K+K++YA+ +NSF
Sbjct: 312 VVIKPVNGVTRKGSNQSDSFDFDGDKSEKM-AFVEAARMMVKMKKSYAMTMNSF 356

[Close]
BLAST of Cla006335 vs. TrEMBL
Match: F6HA13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03670 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.2e-65
Identity = 156/359 (43.45%), Postives = 223/359 (62.12%), Query Frame = 1 

Query: 17  EEHVEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFD 76
           E+    D FD L D ++  IF K++DA+SL RC  VSKRFASLI Q+D V L +P     
Sbjct: 3   EDQGPDDHFDRLSDELVTLIFNKVLDAKSLCRCSVVSKRFASLIPQTDNVSLIVP----- 62

Query: 77  SKHKSRITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEF 136
           S + S+    +     +++   KF+  P + + + +      +S   + Y + +  L+ F
Sbjct: 63  SSNNSKPKRGTFFIVFLKYLVGKFITKPLQFLYQTVVPKLSVNSDEDETYQFTTEVLRNF 122

Query: 137 KGIKFVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEV 196
             IK + ++LPC GDE+GS  G    L+WKAEFG EL+SCVVLGA+S  R S   S    
Sbjct: 123 INIKRLSIQLPCHGDELGSK-GTDYFLRWKAEFGRELESCVVLGATSFHRSSSTPSS--- 182

Query: 197 KETEENRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLL-QTVLITD 256
              +  +L    E     +ELK R+VW ISSLIAAS RH+L+KQ++ D P+  Q+V+I+D
Sbjct: 183 -HKKHKQLH---EPMSATDELKTRVVWMISSLIAASTRHWLLKQIIADIPMNPQSVMISD 242

Query: 257 STKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVM 316
           S+KQGRL M E+Q  ELR SM  +      A VERT++P +++K+WHVPVL+LPA+G VM
Sbjct: 243 SSKQGRLIMGEEQFKELRRSMNPT------APVERTMVPAVRVKLWHVPVLELPASGRVM 302

Query: 317 TAATLVVIRPSGGGMGLDGLD-SIGDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVNS 374
             ATL+VIRP+   M ++  D  +GD F+GEEEE+     EAVR++LK K+ Y +E++S
Sbjct: 303 NGATLIVIRPAERTMKMESEDEGLGDCFEGEEEEE--DLREAVREMLKEKKPYKIEMDS 340

[Close]
BLAST of Cla006335 vs. TrEMBL
Match: B9HP23_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s05230g PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.9e-65
Identity = 150/355 (42.25%), Postives = 219/355 (61.69%), Query Frame = 1 

Query: 20  VEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDSKH 79
           +E+D FD LPDA+L  IF K+ DA+SL RC++VSKRFASL+ ++D VFL+IP      KH
Sbjct: 23  MEEDCFDRLPDALLLVIFNKVGDAKSLTRCISVSKRFASLVFEADTVFLSIP----PRKH 82

Query: 80  KSRITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEFKGI 139
             +   RSL  +  +      +  P     R I   S +       +Y P   LK F+  
Sbjct: 83  NPKADNRSLRRNLFKILISTLIAKPLHFFHRFIADRSDTDRKTVS-FYSPKEVLKHFQQA 142

Query: 140 KFVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKET 199
           K +HMELP  G   G   G  +++KWKA FG+E+K+ V+L A+S +++      L   E 
Sbjct: 143 KTMHMELPSDGGMTGL-EGNDSLIKWKARFGSEIKNFVILSATSFQKRM---QPLSSDEF 202

Query: 200 EENRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQ 259
            EN  EV     + D ++KL+IV TI  L+AAS RHYL+KQ++ +   L+ ++ +D  KQ
Sbjct: 203 SENNGEV-----LTDGQMKLQIVQTIYCLLAASARHYLMKQVLEEHHALENIIASDVCKQ 262

Query: 260 GRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAAT 319
           GR+CM + +V E+R SMKS  +S+  +S+ERT +PDL MK+W+VPVL+LP  G++M  AT
Sbjct: 263 GRVCMGKDEVAEIRNSMKSMVAST-DSSLERTRVPDLSMKLWYVPVLELPENGYIMRGAT 322

Query: 320 LVVIRPSGGGMGLDGLDSIGDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVNSF 375
           L V+RP+  G   +G  S    FDGEE EK   + EAVR+++K+K++Y + V+SF
Sbjct: 323 LAVLRPNDDGQIGNGSKSDLFGFDGEECEK-KAFNEAVREMVKMKKSYLMTVDSF 361

[Close]
BLAST of Cla006335 vs. NCBI nr
Match: gi|659098966|ref|XP_008450369.1| (PREDICTED: F-box protein At4g18380-like [Cucumis melo])

HSP 1 Score: 559.7 bits (1441), Expect = 3.9e-156
Identity = 298/382 (78.01%), Postives = 325/382 (85.08%), Query Frame = 1 

Query: 1   MDPTKNQIQ------IPIQDREEEHVEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSK 60
           MDPT NQ+Q      IPIQ+++     QDFFDLLPD+ILH IFTKL  A SLIRCL VSK
Sbjct: 1   MDPTNNQLQLHIPIPIPIQNQQ-----QDFFDLLPDSILHLIFTKLTHAPSLIRCLTVSK 60

Query: 61  RFASLISQSDAVFLAIPRLLFDSKHKSRITPRSLSNSTIRFFFRKFLFTPFRLIRRLITR 120
           RFASLISQSD+VFL+IP LL     KSR TP SL     RFFFRKFLF PFR IRRLIT 
Sbjct: 61  RFASLISQSDSVFLSIPPLLLTPNPKSRTTPPSL-----RFFFRKFLFNPFRFIRRLITH 120

Query: 121 TSKSSSGFGDWYYWPSVALKEFKGIKFVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELK 180
           TS+S+S F DWYYWPSVALKE KG+K +H+ELPCCGDEIGSNH GGA+LKWKAEFG++LK
Sbjct: 121 TSQSTSRFSDWYYWPSVALKELKGLKSLHIELPCCGDEIGSNHNGGALLKWKAEFGSQLK 180

Query: 181 SCVVLGASSLRRKSIVESEL-EVK-ETEENRLEVESESEMGDEELKLRIVWTISSLIAAS 240
           +CVVLGASSLRRKS+VESE  EVK ETEENRL  ESESEMGD ELK RIVWTISSLIAAS
Sbjct: 181 TCVVLGASSLRRKSVVESESSEVKAETEENRLHSESESEMGDGELKSRIVWTISSLIAAS 240

Query: 241 MRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTV 300
           MRHYLVKQMVNDFPLL+TVLITDS KQGRLCMEE++VMELRESMK SSSS     VER+V
Sbjct: 241 MRHYLVKQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMKLSSSSC----VERSV 300

Query: 301 IPDLKMKMWHVPVLDLPAAGFVMTAATLVVIRPSGGGMGLDGLDSIGDDFDGEEEEKLGV 360
           IPDLKMKMW+VPVLDL AAGFVMTAATLVVI+PSGGGMGLDGL+ IGD+FD E+ EK GV
Sbjct: 301 IPDLKMKMWYVPVLDLAAAGFVMTAATLVVIKPSGGGMGLDGLERIGDEFDSEDGEKFGV 360

Query: 361 YGEAVRKLLKLKRNYALEVNSF 375
           YGEAVRKL+KLKRNYALEVNSF
Sbjct: 361 YGEAVRKLMKLKRNYALEVNSF 368

[Close]
BLAST of Cla006335 vs. NCBI nr
Match: gi|449442571|ref|XP_004139055.1| (PREDICTED: F-box protein At4g18380-like [Cucumis sativus])

HSP 1 Score: 538.1 bits (1385), Expect = 1.2e-149
Identity = 283/376 (75.27%), Postives = 310/376 (82.45%), Query Frame = 1 

Query: 1   MDPTKNQIQIPIQDREEEHVEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLI 60
           MDPT NQ             +QD FDLLPD+ILH IFTKL  A SLIRCLAVSKRFASLI
Sbjct: 1   MDPTNNQ-------------QQDLFDLLPDSILHLIFTKLTHAPSLIRCLAVSKRFASLI 60

Query: 61  SQSDAVFLAIPRLLFDSKHKSRITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSS 120
            QSD+VFL+IP LL     KSR TPRS +     FF RKF F PFR IRRLIT TS+S+ 
Sbjct: 61  PQSDSVFLSIPPLLLTPNPKSRTTPRSPT-----FFLRKFFFNPFRFIRRLITHTSQSTP 120

Query: 121 GFGDWYYWPSVALKEFKGIKFVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLG 180
            F DWYYWPSVALKE KG + +H++LPCCGDEIGSNH GGA+LKWKAEFG+ELK+CVVLG
Sbjct: 121 RFTDWYYWPSVALKELKGFQSLHIQLPCCGDEIGSNHNGGALLKWKAEFGSELKTCVVLG 180

Query: 181 ASSLRRKSIVESELEV--KETEENRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLV 240
           ASSLRRKS+VESE     +ETEENRL  ESESEMGD ELK RIVWTISSLIAASMRHYLV
Sbjct: 181 ASSLRRKSVVESESSAVKEETEENRLHAESESEMGDGELKSRIVWTISSLIAASMRHYLV 240

Query: 241 KQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKM 300
           KQMVNDFPLL+TVLITDS KQGRLCMEE++VMELRESM+ SSSS     VER+VIPDLKM
Sbjct: 241 KQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMQLSSSS----YVERSVIPDLKM 300

Query: 301 KMWHVPVLDLPAAGFVMTAATLVVIRPSGGGMGLDGLDSIGDDFDGEEEEKLGVYGEAVR 360
           KMW+VPVLDLP AGFVMTAATLVVI+PSGGGMGLDGL+ IGD+FD E+ EK GVYGEAVR
Sbjct: 301 KMWYVPVLDLPEAGFVMTAATLVVIKPSGGGMGLDGLERIGDEFDSEDGEKFGVYGEAVR 354

Query: 361 KLLKLKRNYALEVNSF 375
           KL+KLKRNYALEVNSF
Sbjct: 361 KLMKLKRNYALEVNSF 354

[Close]
BLAST of Cla006335 vs. NCBI nr
Match: gi|1009114363|ref|XP_015873646.1| (PREDICTED: F-box protein At4g18380-like [Ziziphus jujuba])

HSP 1 Score: 293.5 bits (750), Expect = 5.2e-76
Identity = 172/368 (46.74%), Postives = 242/368 (65.76%), Query Frame = 1 

Query: 16  EEEHVEQDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLF 75
           EEE  E+D+F  LPD IL  IF K++DA+SL+RC++VSKRFASL+ Q D+V L +P  L 
Sbjct: 26  EEEQEEEDWFGQLPDEILLFIFNKILDAKSLVRCVSVSKRFASLVPQIDSVVLHLPPHLP 85

Query: 76  DSKHKSRITPRSLSNST--IRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVAL 135
             K     +   L  S    +F   KF+  PFRL+    T+++ +S      YY P+  L
Sbjct: 86  IRKKGYYSSKGGLRRSLTLFKFLLNKFVSKPFRLL----TKSNSNSRRNELLYYSPTEVL 145

Query: 136 KEFKGIKFVHMELPCCGDEIGSNHGGG--AVLKWKAEFGAELKSCVVLGASSLRRKSIVE 195
           ++FK IK + +ELP  G E+G N      ++LKW A+FG++L+SC +LGA+SL RK   +
Sbjct: 146 RDFKEIKSLRLELPSHGGELGLNKPDSDLSLLKWNAQFGSKLRSCTILGANSLERKPNSQ 205

Query: 196 SELEVKETEENRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTV 255
              + KE EEN  E++S   + DEELKLRIVW +SSLIAAS RH+L+KQ+V  FP L  V
Sbjct: 206 INKQSKEHEENDGEIQSL--LDDEELKLRIVWMVSSLIAASARHHLLKQVVAGFPTLFDV 265

Query: 256 LITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAA 315
           +ITD  KQG+L M E+Q+ ELR S+ SS  S   +S+ER++IPDL MK+W+ PVL+LP +
Sbjct: 266 VITDGNKQGKLSMSEEQLGELRSSLDSSMVSE-SSSLERSMIPDLSMKLWYAPVLELPGS 325

Query: 316 GFVMTAATLVVIRP-----SGGGMGLDGLDSIGDDFDGEEEEKLGVYGEAVRKLLKLKRN 375
           GFVM  ATL+ I+P      G   G D L+ +    D E+EE+ G++GEAV++L+K+K+ 
Sbjct: 326 GFVMKGATLISIKPLDVEKKGNDHG-DQLE-VSGFHDEEDEEQRGLFGEAVKELMKMKKT 384

[Close]
BLAST of Cla006335 vs. NCBI nr
Match: gi|703162816|ref|XP_010113152.1| (F-box protein [Morus notabilis])

HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68
Identity = 152/362 (41.99%), Postives = 233/362 (64.36%), Query Frame = 1 

Query: 22  QDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDSKHKS 81
           +D+FD LPD +LH IF K++DA++L+RCL VSKRF SLISQ+DAVFL +P      K+K 
Sbjct: 21  RDYFDQLPDPLLHLIFNKILDAKTLVRCLPVSKRFNSLISQTDAVFLPLP----PQKNKP 80

Query: 82  RITPRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEFKGIKF 141
               RS                 FR + +++++  +++     +Y+ P   LK F  +K 
Sbjct: 81  AKLVRSF----------------FRFLHKIVSKKPRNAHR-NVFYHSPCEVLKGFNELKS 140

Query: 142 VHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEE 201
           +H+ELP C  E+G   G  ++LKWKAEFG+ L++CV+LGA+SL+++ I +++   KE + 
Sbjct: 141 LHLELPRCKGEMGFA-GKDSLLKWKAEFGSNLRNCVILGANSLKKEKIAKNDNLAKEND- 200

Query: 202 NRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGR 261
                 +++ + D+ELKLRIVW IS LIAAS RHYL+K++V+DFP L  V+++D  ++G+
Sbjct: 201 ------NQNALSDDELKLRIVWMISCLIAASARHYLLKRVVSDFPTLTNVVVSDGDRRGK 260

Query: 262 LCMEEKQVMELRESMKSSSSSSIG--ASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAAT 321
           + +  +++ ELR    S  SS +   +S+ER++IPDL MKMW+VP + LP  G+V+  AT
Sbjct: 261 VLIGGEELAELRSESVSGDSSDVALESSLERSLIPDLGMKMWYVPRMVLPTCGWVLEGAT 320

Query: 322 LVVIRPSGGGM---GLDGLDSI----GDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVN 375
           LVVI+P   G+   G DG D      G   DG+EEE+  +  EAVR+++K+K+ Y +E+ 
Sbjct: 321 LVVIKPLDRGVIGKGSDGCDCDLLVGGGGLDGDEEER-EILDEAVRQMVKMKKTYVMEMT 352

[Close]
BLAST of Cla006335 vs. NCBI nr
Match: gi|255580603|ref|XP_002531125.1| (PREDICTED: F-box protein At4g18380 [Ricinus communis])

HSP 1 Score: 267.7 bits (683), Expect = 3.1e-68
Identity = 155/354 (43.79%), Postives = 227/354 (64.12%), Query Frame = 1 

Query: 22  QDFFDLLPDAILHQIFTKLIDARSLIRCLAVSKRFASLISQSDAVFLAIPRLLFDSKHKS 81
           +DFFD LPD++L  IF KL D+RSL +CL VSKRF+SL+ Q+D VFL+IP      K KS
Sbjct: 12  EDFFDPLPDSLLLLIFNKLCDSRSLAQCLLVSKRFSSLVFQADNVFLSIPT----PKPKS 71

Query: 82  RITPRS-LSNSTIRFFFRKFLFTPFRLIRRLITRTSKSSSGFGDWYYWPSVALKEFKGIK 141
             + R+  S + +R    KF+  P +    +    S  +SG    YY P+  LK FK +K
Sbjct: 72  ASSHRNRASRNLLRTLVHKFIAKPLQFFPCVAAPKSPGNSGCIS-YYSPNEVLKHFKNVK 131

Query: 142 FVHMELPCCGDEIGSNHGGGAVLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETE 201
            +H+++P   ++IG      ++LKW+AEF  ELK+CVVL A+S++  +  ++   +   E
Sbjct: 132 SLHIKVPFQCEKIGLECSN-SLLKWQAEFSGELKNCVVLSATSIQECN--KNHCCINHVE 191

Query: 202 ENRLEVESESEMGDEELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQG 261
           E          + D+ELKLRIV TIS LIAAS RH L+KQ++ +  +L+ V I+D  KQG
Sbjct: 192 EGGGGGTVGQILNDDELKLRIVTTISCLIAASARHLLLKQILAEHHMLENVTISDVNKQG 251

Query: 262 RLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATL 321
           RLC+ + Q++E+R +MKS + S   +S+ERT +PDL MK+W+VPVL+LPA G++M  ATL
Sbjct: 252 RLCVGKDQIVEMRNAMKSLAVSESSSSIERTPVPDLSMKLWYVPVLELPATGYLMKGATL 311

Query: 322 VVIRPSGGGMGLDGLDSIGDDFDGEEEEKLGVYGEAVRKLLKLKRNYALEVNSF 375
           VVI+P  G        S   DFDG++ EK+  + EA R ++K+K++YA+ +NSF
Sbjct: 312 VVIKPVNGVTRKGSNQSDSFDFDGDKSEKM-AFVEAARMMVKMKKSYAMTMNSF 356

The following BLAST results are available for this feature:
BLAST of Cla006335 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB237_ARATH2.2e-5037.86F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1[more]
FB19_ARATH1.6e-4836.51F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1[more]
FB285_ARATH2.3e-4734.16F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1[more]
FB91_ARATH9.0e-4434.38F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1[more]
FB303_ARATH1.1e-4135.88F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1[more]
BLAST of Cla006335 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M086_CUCSA8.5e-15075.27Uncharacterized protein OS=Cucumis sativus GN=Csa_1G617380 PE=4 SV=1[more]
W9SFR5_9ROSA9.6e-6941.99F-box protein OS=Morus notabilis GN=L484_000159 PE=4 SV=1[more]
B9SYQ6_RICCO2.1e-6843.79Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0063160 PE=4 SV=1[more]
F6HA13_VITVI2.2e-6543.45Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03670 PE=4 SV=... [more]
B9HP23_POPTR4.9e-6542.25Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s05230g PE=4 SV=1[more]
BLAST of Cla006335 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659098966|ref|XP_008450369.1|3.9e-15678.01PREDICTED: F-box protein At4g18380-like [Cucumis melo][more]
gi|449442571|ref|XP_004139055.1|1.2e-14975.27PREDICTED: F-box protein At4g18380-like [Cucumis sativus][more]
gi|1009114363|ref|XP_015873646.1|5.2e-7646.74PREDICTED: F-box protein At4g18380-like [Ziziphus jujuba][more]
gi|703162816|ref|XP_010113152.1|1.4e-6841.99F-box protein [Morus notabilis][more]
gi|255580603|ref|XP_002531125.1|3.1e-6843.79PREDICTED: F-box protein At4g18380 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla006335Cla006335gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla006335Cla006335.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla006335.1.cds1Cla006335.1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 27..61
score: 4.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 14..78
score: 7.19
NoneNo IPR availableunknownCoilCoilcoord: 189..209
scor
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 15..66
score: 8.9
NoneNo IPR availablePANTHERPTHR31215FAMILY NOT NAMEDcoord: 1..374
score: 2.9E
NoneNo IPR availablePANTHERPTHR31215:SF2SUBFAMILY NOT NAMEDcoord: 1..374
score: 2.9E