Cla003538.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003538
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	CBS domain-containing protein-like (AHRD V1 ***- B8AP73_ORYSI); contains Interpro domain(s) IPR000644 Cystathionine beta-synthase, core
Location	Chr1 : 14149771 .. 14153280 (+)
Sequence length	708

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTATCGTTGCCTCAATCCAGGGCGAAGAGTTTTTCGGTTCAGGAGTTGTTATTTGGTCCTCGCCGTAGACATCCATCGCCTATACTTCATGCATCGGTGGCTCAGAGCTTCCCGGAGCTTCGAAAATTTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGGTGTGTTGTTCTGTTTATTATTATTATTATTATTATTATTATTATTATTGTTTTTCGTCTTTTTTTGTGTGAGTAATGGTGAATTCTAGTTGTTGGTTAGTTTGTCTCGAATGCTTCGTTGTGATTGAGATTAATATGCTTTCTCGATTTGAATTTTCTGGTAATTGTAATTTGATGGAACTTGGAGAATGTGAAATGATATTGGAGAAACTTTAATTTTGACTGATTTCTTGCTTTGTTAAGAAAACCTGACGAATTTGCATAATGCTTTTGAGGTATGGAGCTTAGTACATTTTGATGATTCATGCTGTTGTTTAATTGCTTCTGAGTTCTCTGTAATATTTTGATATGCAGTCAAGAAGTGGTGTATACACAGTTGGTGACTTTATGACCAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGGTAGTTGAAATTTTTGGAAATTTCCCACAACCTACTGGCAAAATGTGGCTTATTGTGTCTGTTTTTGCATGCAGCATTAGAAATTCTGGTGGAGAAAAGGATCACGGGATTTCCAGTAGTTGATGACAATTGGAAACTGGTATCATTTCATTTCTCATGTTTATTTGAGGGATTTCTCCACTATAGTTATGTTCTTATCTTGTTAGCCCGTTTGCAAGTATTTCTGGTTATCTAACATCCGAATATTGCCCCACGAAACCTTTCCTCTGAAGTTGTTCAGTTCTGTCCAGGATTTTACATCAAATTGTTGACTTGAATCGTCAAGTTTTCACTTTTCACTATGACTTGTATGATTTTTTTGTCTGTTCCCCATCAAGAATTAAATTGGGAAAGCATATGTTATTTCACCCACAATTTGTTTTGAATGTCGAATTGTGAACTTGAAAGTTAAGACAGATGGCACATGTTGCTTATTGCTATACAAGTCAATCCTTTACCATTTAGGTCATATTTACTACTCCGTAATCAAAATTATTGCAATCGTAATGGATTTTCTTTATTATTCGTAATTCACATAATATTGTTAACAGGTTTTTTTTTTTGTAAATGTATTTAAATGGGCCCCACTTTTCGGATTACGATCGATTGATTACATTTATTGGGAAGTAAACATGGCCTTATCTCAATTCCTGATCAGGATGAATGCAACCTTTAGTGCTTATAATGTGTGTGAATTGAAGCTCATATGATTTTTTTGTTGTCCCCTCAGACACCTTTATCTATATTATCAATGAACTGTATGATTGATTTAAATGGCCTAACCTTGGATACATAATCATCAACACTCATAATAGAAATTACTTCTTGATGCAGGTTGGCGTAGTTTCTGACTATGACTTGTTAGCACTAGATTCCATCTCAGGTATGCTTGAAATTTCTTGTTATTCCTGTCAGCAAGTCGTCTAATTCCCATTCCTTGCCACTACCATTGCTTATCCTGTTTGAGAAAGATTGCTCAATTGTCTTATCTTTTGTGTTTGTTGCATCTTTAGCTATGATTCTTTTTCAGGAAAGAAGAGAAAATTTAGCTTTTCTAGATTTTATATTTCTATTTAAATAACTCAAGTTTCTGTACTTGACTCTCTTTTCCTATACTTTTTTGCGAGATTAGTATTGATTTTTTTACATGTATTGATTTTCTTCTTCCAATTTTTTCAAAAGATAAAGGTTAAACTGTCATTTTTGTTCATATACTTAGCTTTTCATCCCATTTTAGTCCCTACACTTTCAATAAGTCTTAAATAAGTCTTAAATTTAGTCTATGTACTTTTACTAAATCTTAAATTTATTCTATTTACTTTCAGTAAACAAATTTAGTCCTTCAAAGAGACACCATGTGAGTCTATTTTCAAAACTTTTAAAGGGAATATTAATATTGACTTTTTTAAAAAATAGATATCAATAATAATAAACGAACAGCTGGACTAAGTTTATTGTAAGCACGAGAACTAAATTTGGACATTTGAAAATATAGAGACTAAAATAGAACAAAACCAGTATGTAGACCAAGATGATATTGTAGCCACAATTATCTTTGATCCCAAGAAAAGACTAATTTCCTTTTCATAACAAATCGTTTTATAGGTGTGGATATTGCAGAATTTTGGTTTTTGTAATCTGAGGAAATTGGTCTGACTGAACTTGTAATAAGTTCAAGTATTCTAGAGAGATAAAATTTTGATATGTTCTAATTAGGTGGTGGAAGGAGAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAGTATGCATTGACCTGCTCCTTTTATTTTATTTTATTTTATTTCTTTGCATTCCTTTTTTTTTTTTTTCTTTGTCCAACATCTTTTTGCCTTTTCCATCAGTGTTCCTGATGACTTTATCTGTGCAATAATTTCATCAGAGTATTAAATGAAGTAGAAAACTCAACTTTATAAAAAATTTACATAAAGTAAGAGTTACTGTATTAATTCGTTGAAAAGCATGCTTAAACCTTTAAATTTTACAAGAGAGCATACACAGCCCAGGTTATATTAGCAAGAAGCATGAACTTAAGTTTACTGGTCAAAGATTTCATTTTCATGCATAGTGTTTATGCCTCAGTGAGCACTGACATAGGCCTTGGTTTGTCTCTTCGCTTTTGGTTCTTTTTTCTTGCTCATGAACGTCAGTATCGGATTTGGCAAGAGGCATATGATGGGTAAAACTGTGCACTTTACGTCTTTACCAAAGTAATTTTGCTTTCTCCTTTTCATAATTCTGACTTCAAATTAATGTTTCTGTGGCTTACTTATTTCAATTGCCTGTTACTTTTACTAGTTTGTAAAGGGCATGAAATGGAAATATTCTGCACAAATGATGTCTCTAATCCTAAATCGTCCTTGTAGACATTTAATGAGGTACAAAGGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATGACCGATCTTGAGGATGTTGCTAGGTTCAATAACAATTTTCTCCACTGTTTTCATATCACATCATTTTTGTTCTTGCACCTGAATTTTGAAGTTTGTTTCTTTCTATTTATCAAATGCAGATTATTGCTTCAGACGAAGTATCGCCGACTTCCCGTGGTCGATGCTGATGGAAAGCTGGTAAGAGATATCCATTCCCCTCTTCTAATTTGAATTTGATGGTCGTCCTCTTCTCTCTTGAGCGTAAAATTATGAAATCTTTAATGAAGGTTGGAATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGA

mRNA sequence

ATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTATCGTTGCCTCAATCCAGGGCGAAGAGTTTTTCGGTTCAGGAGTTGTTATTTGGTCCTCGCCGTAGACATCCATCGCCTATACTTCATGCATCGGTGGCTCAGAGCTTCCCGGAGCTTCGAAAATTTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGTCAAGAAGTGGTGTATACACAGTTGGTGACTTTATGACCAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGCATTAGAAATTCTGGTGGAGAAAAGGATCACGGGATTTCCAGTAGTTGATGACAATTGGAAACTGGTTGGCGTAGTTTCTGACTATGACTTGTTAGCACTAGATTCCATCTCAGGTGGTGGAAGGAGAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAACATTTAATGAGGTACAAAGGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATGACCGATCTTGAGGATGTTGCTAGATTATTGCTTCAGACGAAGTATCGCCGACTTCCCGTGGTCGATGCTGATGGAAAGCTGGTTGGAATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGA

Coding sequence (CDS)

ATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTATCGTTGCCTCAATCCAGGGCGAAGAGTTTTTCGGTTCAGGAGTTGTTATTTGGTCCTCGCCGTAGACATCCATCGCCTATACTTCATGCATCGGTGGCTCAGAGCTTCCCGGAGCTTCGAAAATTTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGTCAAGAAGTGGTGTATACACAGTTGGTGACTTTATGACCAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGCATTAGAAATTCTGGTGGAGAAAAGGATCACGGGATTTCCAGTAGTTGATGACAATTGGAAACTGGTTGGCGTAGTTTCTGACTATGACTTGTTAGCACTAGATTCCATCTCAGGTGGTGGAAGGAGAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAACATTTAATGAGGTACAAAGGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATGACCGATCTTGAGGATGTTGCTAGATTATTGCTTCAGACGAAGTATCGCCGACTTCCCGTGGTCGATGCTGATGGAAAGCTGGTTGGAATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGA

Protein sequence

MESIGCSLSSLSLPQSRAKSFSVQELLFGPRRRHPSPILHASVAQSFPELRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENRT

Homology

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BLAST of Cla003538 vs. Swiss-Prot
Match: CBSX1_ARATH (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-78
Identity = 153/222 (68.92%), Postives = 174/222 (78.38%), Query Frame = 1


Query: 11  LSLPQSRAKSFSVQELLFGPRRRHPSPILHASVAQSFPELRKFTSL--AASGTLMANSVP 70
           LS    RA S      L  PR     P    + ++SFP   +  S   AA  TLM NS  
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRIPSASSAAGSTLMTNSSS 69

Query: 71  SRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDL 130
            RSGVYTVG+FMT+KE+LHVVKPTT+VDEALE+LVE RITGFPV+D++WKLVG+VSDYDL
Sbjct: 70  PRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDL 129

Query: 131 LALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVREMTDLE 190
           LALDSISG GR + SMFPEVDS+WKTFN VQ+LLSKTNGK+VGDLMTPAPLVV E T+LE
Sbjct: 130 LALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLE 189

Query: 191 DVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHA 231
           D A++LL+TKYRRLPVVD+DGKLVGIITRGNVVRAALQIK +
Sbjct: 190 DAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

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BLAST of Cla003538 vs. Swiss-Prot
Match: CBSX2_ARATH (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.9e-72
Identity = 130/171 (76.02%), Postives = 154/171 (90.06%), Query Frame = 1


Query: 65  NSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVS 124
           NSVP+++G YTVGDFMT ++ LHVVKP+TSVD+ALE+LVEK++TG PV+DDNW LVGVVS
Sbjct: 68  NSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVS 127

Query: 125 DYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVREM 184
           DYDLLALDSISG  + DT++FP+VDS+WKTFNE+Q+L+SKT GKVVGDLMTP+PLVVR+ 
Sbjct: 128 DYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDS 187

Query: 185 TDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENRT 236
           T+LED ARLLL+TK+RRLPVVDADGKL+GI+TRGNVVRAALQIK   EN T
Sbjct: 188 TNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETENST 238

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BLAST of Cla003538 vs. Swiss-Prot
Match: Y1426_METJA (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1426 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 38/145 (26.21%), Postives = 77/145 (53.10%), Query Frame = 1


Query: 88  VVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMFPE 147
           VV     + + + +  + +I+G PV++ + KLVG++S+ D++   +I         + P 
Sbjct: 26  VVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVK--TIVTHNEDLNLILPS 85

Query: 148 ----VDSSWKTFNEVQRLLSKTNGKV---VGDLMTPAPLVVREMTDLEDVARLLLQTKYR 207
               ++   KT  +++  +      +   V D+MT   +V +    + D A+L+++   +
Sbjct: 86  PLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIK 145

Query: 208 RLPVVDADGKLVGIITRGNVVRAAL 226
           RLPVVD +G L+GI+TRG+++ A +
Sbjct: 146 RLPVVDDEGNLIGIVTRGDLIEALI 168

HSP 2 Score: 45.8 bits (107), Expect = 7.4e-04
Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 1


Query: 166 NGKV--VGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRA 225
           NG++  + D+M   P+VV E  DL DV RL  + K    PV++ DGKLVGII+  ++V+ 
Sbjct: 11  NGEIMLIKDIMKK-PIVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKT 70

Query: 226 ALQIKHAEE 233
              + H E+
Sbjct: 71  I--VTHNED 76

HSP 3 Score: 43.1 bits (100), Expect = 4.8e-03
Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 1


Query: 76  VGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDLL 130
           V D MTRK  + V KP  ++++A +++V+  I   PVVDD   L+G+V+  DL+
Sbjct: 113 VRDVMTRK--VIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLI 164

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BLAST of Cla003538 vs. Swiss-Prot
Match: IMDH_AQUAE (Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) GN=guaB PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = 1


Query: 89  VKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMFPEV 148
           VKP T V EAL+I+ + +I+G PVVD+  KL+G++++ DL  +              PE 
Sbjct: 103 VKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDLRFIK-------------PED 162

Query: 149 DSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVR-EMTDLEDVARLLLQTKYRRLPVVDA 208
            S                 K V + MT   L+   E   L++   +  + K  +LP+VD 
Sbjct: 163 YS-----------------KPVSEFMTKENLITAPEGITLDEAEEIFRKYKIEKLPIVDK 207

Query: 209 DGKLVGIITRGNVVR 223
           +GK+ G+IT  ++V+
Sbjct: 223 EGKIKGLITIKDIVK 207

HSP 2 Score: 33.5 bits (75), Expect = 3.8e+00
Identity = 17/64 (26.56%), Postives = 33/64 (51.56%), Query Frame = 1


Query: 153 KTFNEVQRLLSKTNGKVVGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVVDADGKLV 212
           K   EV+++    +G ++       P+ V+  T +++   ++ + K   +PVVD + KL+
Sbjct: 81  KQAEEVEKVKKSESGMIIN------PVTVKPDTRVKEALDIMAKYKISGVPVVDEERKLI 138

Query: 213 GIIT 217
           GI+T
Sbjct: 141 GILT 138

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BLAST of Cla003538 vs. Swiss-Prot
Match: Y1225_METJA (Uncharacterized protein MJ1225 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1225 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 36/140 (25.71%), Postives = 71/140 (50.71%), Query Frame = 1


Query: 83  KEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDLLALDSISGGGRRDT 142
           +E +  +K    +DEA+E  + K + G P+V+D  +L+ ++++ D++             
Sbjct: 91  EENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIR------------ 150

Query: 143 SMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVREMTDLEDVARLLLQTKYRRL 202
           ++  ++D +                +V+ D +T   +V      L+DVAR +++  +RRL
Sbjct: 151 ALLDKIDEN----------------EVIDDYITRDVIVATPGERLKDVARTMVRNGFRRL 201

Query: 203 PVVDADGKLVGIITRGNVVR 223
           PVV ++G+LVGIIT  + ++
Sbjct: 211 PVV-SEGRLVGIITSTDFIK 201

HSP 2 Score: 39.7 bits (91), Expect = 5.3e-02
Identity = 35/149 (23.49%), Postives = 67/149 (44.97%), Query Frame = 1


Query: 76  VGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDLLALDSIS 135
           + D++TR  ++ V  P   + +    +V       PVV +  +LVG+++  D + L    
Sbjct: 150 IDDYITR--DVIVATPGERLKDVARTMVRNGFRRLPVVSEG-RLVGIITSTDFIKL---- 209

Query: 136 GGGRRDTSMFPEVDSSWKTFNEVQ--RLLSKTNGKVVGDLMTPAPLVVREMTDLEDVARL 195
                       + S W  FN +Q   +   TN ++  ++M    +  +E   L+ +A +
Sbjct: 210 ------------LGSDW-AFNHMQTGNVREITNVRME-EIMKRDVITAKEGDKLKKIAEI 269

Query: 196 LLQTKYRRLPVVDADGKLVGIITRGNVVR 223
           ++      LPVVD + ++ GIIT  +V++
Sbjct: 270 MVTNDIGALPVVDENLRIKGIITEKDVLK 277

HSP 3 Score: 32.3 bits (72), Expect = 8.5e+00
Identity = 18/44 (40.91%), Postives = 25/44 (56.82%), Query Frame = 1


Query: 179 LVVREMTDLEDVARLLLQTKYRRLPVVDA-DGKLVGIITRGNVV 222
           + V   T +      + + KYRRLPVV+A + K+VGIIT  ++V
Sbjct: 15  VTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIV 58

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BLAST of Cla003538 vs. TrEMBL
Match: A0A0A0LSY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G152500 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 8.0e-114
Identity = 217/234 (92.74%), Postives = 222/234 (94.87%), Query Frame = 1


Query: 1   MESIGCSLSSLSLPQSRAKSFSVQELLFGPRRRHPSPILHASVAQSFPELRKFTSLAASG 60
           MESIGCSLSSLSL   RAKSFSVQE+LFGP RR   PILHASVAQSFPELRK TS+AASG
Sbjct: 1   MESIGCSLSSLSLAPFRAKSFSVQEMLFGPCRRPSLPILHASVAQSFPELRKSTSIAASG 60

Query: 61  TLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLV 120
           TLMANSVPS +GVY VGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPV+DDNWKLV
Sbjct: 61  TLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDDNWKLV 120

Query: 121 GVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLV 180
           GVVSDYDLLALDSISGGGR DTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMT APLV
Sbjct: 121 GVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTTAPLV 180

Query: 181 VREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 235
           VRE+TDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR
Sbjct: 181 VREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 234

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BLAST of Cla003538 vs. TrEMBL
Match: F6H4H6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00200 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.2e-82
Identity = 160/207 (77.29%), Postives = 182/207 (87.92%), Query Frame = 1


Query: 26  LLFGPRRRHPSPILHASVAQSFPELRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEE 85
           LLF P R+ P      S ++    +R+  +LAA+GTLMANSVPS++GVYTVGDFMTRKE+
Sbjct: 38  LLFQPGRKPPVGSTVGSRSERISGIRRSPALAAAGTLMANSVPSKNGVYTVGDFMTRKED 97

Query: 86  LHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMF 145
           LHVVK TT+V+EALEILVE RITGFPV+DD+WKLVG+VSDYDLLALDSISGGG  DT MF
Sbjct: 98  LHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGLTDTIMF 157

Query: 146 PEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVV 205
           PEVDS+WKTFNE+Q+LLSKTNGKVVGDLMTPAP+VVRE T+LED ARLLL+TKYRRLPVV
Sbjct: 158 PEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 217

Query: 206 DADGKLVGIITRGNVVRAALQIKHAEE 233
           D+DGKLVGIITRGNVVRAALQIK A E
Sbjct: 218 DSDGKLVGIITRGNVVRAALQIKRAVE 244

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BLAST of Cla003538 vs. TrEMBL
Match: A0A067GUY1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 8.9e-81
Identity = 155/183 (84.70%), Postives = 169/183 (92.35%), Query Frame = 1


Query: 50  LRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITG 109
           LR+ +++ ASGTL ANS    SGVYTVGDFMT KEELHVVKPTT+VDEALEILVEKRITG
Sbjct: 59  LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118

Query: 110 FPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKV 169
           FPV+DD+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+
Sbjct: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178

Query: 170 VGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 229
           VGDLMTPAP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIKH
Sbjct: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238

Query: 230 AEE 233
           A E
Sbjct: 239 ATE 241

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BLAST of Cla003538 vs. TrEMBL
Match: V4UIP6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026357mg PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.0e-80
Identity = 155/183 (84.70%), Postives = 168/183 (91.80%), Query Frame = 1


Query: 50  LRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITG 109
           LR+ + + ASGTL ANS    SGVYTVGDFMT KEELHVVKPTT+VDEALEILVEKRITG
Sbjct: 59  LRRSSVVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118

Query: 110 FPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKV 169
           FPV+DD+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+
Sbjct: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178

Query: 170 VGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 229
           VGDLMTPAP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIKH
Sbjct: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238

Query: 230 AEE 233
           A E
Sbjct: 239 ATE 241

[Close]

BLAST of Cla003538 vs. TrEMBL
Match: A0A067GUL0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.4e-79
Identity = 155/188 (82.45%), Postives = 169/188 (89.89%), Query Frame = 1


Query: 50  LRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEA-----LEILVE 109
           LR+ +++ ASGTL ANS    SGVYTVGDFMT KEELHVVKPTT+VDEA     LEILVE
Sbjct: 59  LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVE 118

Query: 110 KRITGFPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSK 169
           KRITGFPV+DD+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSK
Sbjct: 119 KRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSK 178

Query: 170 TNGKVVGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAA 229
           TNGK+VGDLMTPAP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAA
Sbjct: 179 TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAA 238

Query: 230 LQIKHAEE 233
           LQIKHA E
Sbjct: 239 LQIKHATE 246

[Close]

BLAST of Cla003538 vs. NCBI nr
Match: gi|449443418|ref|XP_004139474.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 1.1e-113
Identity = 217/234 (92.74%), Postives = 222/234 (94.87%), Query Frame = 1


Query: 1   MESIGCSLSSLSLPQSRAKSFSVQELLFGPRRRHPSPILHASVAQSFPELRKFTSLAASG 60
           MESIGCSLSSLSL   RAKSFSVQE+LFGP RR   PILHASVAQSFPELRK TS+AASG
Sbjct: 1   MESIGCSLSSLSLAPFRAKSFSVQEMLFGPCRRPSLPILHASVAQSFPELRKSTSIAASG 60

Query: 61  TLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLV 120
           TLMANSVPS +GVY VGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPV+DDNWKLV
Sbjct: 61  TLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDDNWKLV 120

Query: 121 GVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLV 180
           GVVSDYDLLALDSISGGGR DTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMT APLV
Sbjct: 121 GVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTTAPLV 180

Query: 181 VREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 235
           VRE+TDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR
Sbjct: 181 VREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 234

[Close]

BLAST of Cla003538 vs. NCBI nr
Match: gi|659071762|ref|XP_008461810.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 417.5 bits (1072), Expect = 1.5e-113
Identity = 218/234 (93.16%), Postives = 222/234 (94.87%), Query Frame = 1


Query: 1   MESIGCSLSSLSLPQSRAKSFSVQELLFGPRRRHPSPILHASVAQSFPELRKFTSLAASG 60
           MESI CSLSSLSL   RAKSFSVQE+LFGP RR   PILHASVAQSFPELRK TSLAASG
Sbjct: 1   MESIVCSLSSLSLAHLRAKSFSVQEMLFGPCRRLSLPILHASVAQSFPELRKSTSLAASG 60

Query: 61  TLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLV 120
           TLMANSVPS +GVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPV+DDNWKLV
Sbjct: 61  TLMANSVPSGTGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDDNWKLV 120

Query: 121 GVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLV 180
           GVVSDYDLLALDSISGGGR DTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMT APLV
Sbjct: 121 GVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTTAPLV 180

Query: 181 VREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 235
           VRE+TDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR
Sbjct: 181 VREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 234

[Close]

BLAST of Cla003538 vs. NCBI nr
Match: gi|225438783|ref|XP_002283079.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Vitis vinifera])

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82
Identity = 160/207 (77.29%), Postives = 182/207 (87.92%), Query Frame = 1


Query: 26  LLFGPRRRHPSPILHASVAQSFPELRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEE 85
           LLF P R+ P      S ++    +R+  +LAA+GTLMANSVPS++GVYTVGDFMTRKE+
Sbjct: 38  LLFQPGRKPPVGSTVGSRSERISGIRRSPALAAAGTLMANSVPSKNGVYTVGDFMTRKED 97

Query: 86  LHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMF 145
           LHVVK TT+V+EALEILVE RITGFPV+DD+WKLVG+VSDYDLLALDSISGGG  DT MF
Sbjct: 98  LHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGLTDTIMF 157

Query: 146 PEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVV 205
           PEVDS+WKTFNE+Q+LLSKTNGKVVGDLMTPAP+VVRE T+LED ARLLL+TKYRRLPVV
Sbjct: 158 PEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 217

Query: 206 DADGKLVGIITRGNVVRAALQIKHAEE 233
           D+DGKLVGIITRGNVVRAALQIK A E
Sbjct: 218 DSDGKLVGIITRGNVVRAALQIKRAVE 244

[Close]

BLAST of Cla003538 vs. NCBI nr
Match: gi|641860427|gb|KDO79116.1| (hypothetical protein CISIN_1g025613mg [Citrus sinensis])

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 155/183 (84.70%), Postives = 169/183 (92.35%), Query Frame = 1


Query: 50  LRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITG 109
           LR+ +++ ASGTL ANS    SGVYTVGDFMT KEELHVVKPTT+VDEALEILVEKRITG
Sbjct: 59  LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118

Query: 110 FPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKV 169
           FPV+DD+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+
Sbjct: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178

Query: 170 VGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 229
           VGDLMTPAP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIKH
Sbjct: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238

Query: 230 AEE 233
           A E
Sbjct: 239 ATE 241

[Close]

BLAST of Cla003538 vs. NCBI nr
Match: gi|568883420|ref|XP_006494468.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic isoform X1 [Citrus sinensis])

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 155/183 (84.70%), Postives = 169/183 (92.35%), Query Frame = 1


Query: 50  LRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITG 109
           LR+ +++ ASGTL ANS    SGVYTVGDFMT KEELHVVKPTT+VDEALEILVEKRITG
Sbjct: 59  LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118

Query: 110 FPVVDDNWKLVGVVSDYDLLALDSISGGGRRDTSMFPEVDSSWKTFNEVQRLLSKTNGKV 169
           FPV+DD+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+
Sbjct: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178

Query: 170 VGDLMTPAPLVVREMTDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 229
           VGDLMTPAP+VVRE T+LED ARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIKH
Sbjct: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 238

Query: 230 AEE 233
           A E
Sbjct: 239 ATE 241

The following BLAST results are available for this feature:

BLAST of Cla003538 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CBSX1_ARATH	2.7e-78	68.92	CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CB...	[more]
CBSX2_ARATH	4.9e-72	76.02	CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CB...	[more]
Y1426_METJA	2.6e-09	26.21	Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]
IMDH_AQUAE	1.1e-07	30.37	Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) GN=guaB ...	[more]
Y1225_METJA	1.4e-07	25.71	Uncharacterized protein MJ1225 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]

BLAST of Cla003538 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSY7_CUCSA	8.0e-114	92.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G152500 PE=4 SV=1	[more]
F6H4H6_VITVI	1.2e-82	77.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00200 PE=4 SV=...	[more]
A0A067GUY1_CITSI	8.9e-81	84.70	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1	[more]
V4UIP6_9ROSI	2.0e-80	84.70	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026357mg PE=4 SV=1	[more]
A0A067GUL0_CITSI	6.4e-79	82.45	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1	[more]

BLAST of Cla003538 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443418\|ref\|XP_004139474.1\|	1.1e-113	92.74	PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sati...	[more]
gi\|659071762\|ref\|XP_008461810.1\|	1.5e-113	93.16	PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo...	[more]
gi\|225438783\|ref\|XP_002283079.1\|	1.8e-82	77.29	PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Vitis vinifera]	[more]
gi\|641860427\|gb\|KDO79116.1\|	1.3e-80	84.70	hypothetical protein CISIN_1g025613mg [Citrus sinensis]	[more]
gi\|568883420\|ref\|XP_006494468.1\|	1.3e-80	84.70	PREDICTED: CBS domain-containing protein CBSX1, chloroplastic isoform X1 [Citrus...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000644	CBS_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005623	cell
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla003538	Cla003538	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla003538	Cla003538.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla003538.1.cds1	Cla003538.1.cds1	CDS
Cla003538.1.cds2	Cla003538.1.cds2	CDS
Cla003538.1.cds3	Cla003538.1.cds3	CDS
Cla003538.1.cds4	Cla003538.1.cds4	CDS
Cla003538.1.cds5	Cla003538.1.cds5	CDS
Cla003538.1.cds6	Cla003538.1.cds6	CDS
Cla003538.1.cds7	Cla003538.1.cds7	CDS
Cla003538.1.cds8	Cla003538.1.cds8	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 170..223 score: 9.2E-15coord: 76..130 score: 1.1
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 177..225 score: 6.7E-13coord: 85..133 score: 3.
IPR000644	CBS domain	PROFILE	PS51371	CBS	coord: 174..231 score: 14.893coord: 80..142 score: 13
None	No IPR available	GENE3D	G3DSA:3.10.580.10		coord: 73..231 score: 3.1
None	No IPR available	PANTHER	PTHR11911	INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED	coord: 62..234 score: 3.0E
None	No IPR available	PANTHER	PTHR11911:SF109	SUBFAMILY NOT NAMED	coord: 62..234 score: 3.0E
None	No IPR available	unknown	SSF54631	CBS-domain pair	coord: 71..223 score: 4.13