Cla003271.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003271
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	SWIB/MDM2 domain containing protein (AHRD V1 ***- B6TD34_MAIZE); contains Interpro domain(s) IPR019835 SWIB domain
Location	Chr9 : 32932325 .. 32934930 (+)
Sequence length	1032

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTGCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTCGTTCAGGAGTTGCAGACCAAGCTTGGCCTTGACCTCTCTCATAAAGTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCACCCTCAACAACCCCATCACCACCACAACCACCACCAGCACCACCATCATCATCAACAGCAACAACAACAGCTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAGAGCCCTAATTTCCAATCTGCGCCTTCCCCCACTTCCTCTGCTTTTCATACCTTCACTGCTCAGCCTCCGCCGGTTAAGGCGGAATCCGCCGTCTCTCCCACTGTTCCGGGTTCTGACCCGCCAAAGGAAAGGTGGGGTTCTTTTAGTTTTTCCAATTTTTGGGGTTTTGGGGTTTTTATTTATTTATTTATTTTTGTTTCCCCCACTTGATTTACTTGTTGTTCATTTTGGGTGTGTGTGTTTAATGTTTGTGCAAATCTGTAGTGAAGTTGATTTCATTCTGTTTTCTTGCAATTCTACTGAATTGGTGGAAGGGCTTCTCGATTTTTACTTCAATAGTTCAGAATTAGGGCCAAAAAGGCAGTGAAGTTGTTTTTTTACTTGTGAACTCTGTTGAGAGGGTTTTGGAGTGTATAGATCACTAATTAGTGGCCGTTGGGTTGGTCTTAGTCTTACTCGAGGGTTCAATATTGTTAATTTTCCATTGAATGTTGGGTAGCTCCTGCTTCGTTTTCCTCTGGGTTCAGAAGGTTACTCAGGATTTCTGGTCACAAATGTGACTTTCTGCTTTTGTCATCGCTGTTGGAAAAGTAAATTTCCTCTTAATGATGCCTTGTCAAATGTGTGTGCATAAATATCTACTACGAGCATGTTGAGTTTTCATTTATTTTCTGTTTGTTTTCTTTAAATCGTATTATTTTTACATTCTTGTTGCTAGTCTGGTCAGCACAGCCATACACCATATATGGACAGAAATTTCTTGGGAATTTGTGATTTTGGATTTGTGCATCAGCACGGAAGTGGATAGGTAGGAAGTTAATTTGATGAGAGATGGAAGCTACCCTAGTTTACTGGAAATAGATATTGATATATGCTATCTACATGTGAGGAGTCTTTATCGTGTATATGCACTTTTCTATAAATATCACTGTAATTTTGACCTCTCAGCACACTCTTGAAAGTGACCGGCTAGCTCCTTACCAATCTGGGCTTTCTTTTATTGTGAAATCTAGTAATGTAGCTTAGTGCTTGCAATCTTGTCGAATCTATTATCAGCTGGAAGCCATAAGTATGGAACAATTTGTTGTGTACAACAGAGCTATGAAGCAGAATCTCTCAATTAGTTTTTGTTCCATGGAATGGTGAAATATACCATTCCTGTTTTATTCACAGATTAAAATAATATATGTTTCTCTAGTTCTTACTTCTTAGAACCCAAAGATGTATGTTTTGACTGATTAAATCTCACCTTCACAACTTGAAAGCAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCGGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCCATTGTTGGCCAACCAGAATTGCCAAGAACTGAGGTTTCTATCTCTTTCTTATGTCATAGTTGTTTGATTCTCAATTTTAGTACTTATGAGGTTCATATGATGCTTCTGTGTTTGGTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATTTGCAATGACGAGTTGCGGTTGGTATTTGAAACAGACTGCACCGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATCATTCCTCTTGAACCTACAAGTAAGTATCCAGTTTGATGCTCCCCCATCCCCCTAGTTCTGGAAGAAATCAATAGTTTATTTTATAATCCTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCTACAGTTGGTGTTAAAGGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCTTTAGCAAGTTTTTTTGGTGTCGATGGAAGGGAGATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAAAGTGAATCATCTTGAGGTTGGCAAATAAACTCTGGAAACTTTCACTTTGTTGCATGCTAGCCATTCACTATGTATATAGTCTATCCATCATAATATGAAAAATACTTTGCATGAATTTCCATCATACTTTTTGAACTTTAATACCATCTTTTCAACTTGAGAGGTCATTCCTTTGTAAAAATTCTGCATACTAATCATGGGGTATTGTTCTCATAACAACTTTTTTCCCCATTATCATTCACTTACATTGAATGGTCTTGTACTCACACATTTTGGGATCTTGAAAACAGGACCCTTTGAACCCGATGGCAGTTTTGTGCGATGTAAAACTCCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCATTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCATGA

mRNA sequence

ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTGCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTCGTTCAGGAGTTGCAGACCAAGCTTGGCCTTGACCTCTCTCATAAAGTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCACCCTCAACAACCCCATCACCACCACAACCACCACCAGCACCACCATCATCATCAACAGCAACAACAACAGCTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAGAGCCCTAATTTCCAATCTGCGCCTTCCCCCACTTCCTCTGCTTTTCATACCTTCACTGCTCAGCCTCCGCCGGTTAAGGCGGAATCCGCCGTCTCTCCCACTGTTCCGGGTTCTGACCCGCCAAAGGAAAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCGGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCCATTGTTGGCCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATTTGCAATGACGAGTTGCGGTTGGTATTTGAAACAGACTGCACCGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCTACAGTTGGTGTTAAAGGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCTTTAGCAAGTTTTTTTGGTGTCGATGGAAGGGAGATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAAAGTGAATCATCTTGAGGACCCTTTGAACCCGATGGCAGTTTTGTGCGATGTAAAACTCCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCATTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCATGA

Coding sequence (CDS)

ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTGCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTCGTTCAGGAGTTGCAGACCAAGCTTGGCCTTGACCTCTCTCATAAAGTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCACCCTCAACAACCCCATCACCACCACAACCACCACCAGCACCACCATCATCATCAACAGCAACAACAACAGCTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAGAGCCCTAATTTCCAATCTGCGCCTTCCCCCACTTCCTCTGCTTTTCATACCTTCACTGCTCAGCCTCCGCCGGTTAAGGCGGAATCCGCCGTCTCTCCCACTGTTCCGGGTTCTGACCCGCCAAAGGAAAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCGGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCCATTGTTGGCCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATTTGCAATGACGAGTTGCGGTTGGTATTTGAAACAGACTGCACCGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCTACAGTTGGTGTTAAAGGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCTTTAGCAAGTTTTTTTGGTGTCGATGGAAGGGAGATGCTCCAATCAGAGGTTCTGAGACGCATATGGGAATACATAAAAGTGAATCATCTTGAGGACCCTTTGAACCCGATGGCAGTTTTGTGCGATGTAAAACTCCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCATTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCATGA

Protein sequence

MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFILRSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQPPPVKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRRS

Homology

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BLAST of Cla003271 vs. Swiss-Prot
Match: TRI1_YEAST (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRI1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-13
Identity = 39/102 (38.24%), Postives = 62/102 (60.78%), Query Frame = 1


Query: 163 VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 222
           +S  LQ  +G  ELPRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF 
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFS 185

Query: 223 MNKLLAKHII-------PLEPTKPSSSKKARVENESTVGVKG 258
           MNKLL KH+          E  K +  K+ ++ENES   + G
Sbjct: 186 MNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLENESLPNLSG 226

HSP 2 Score: 47.8 bits (112), Expect = 2.9e-04
Identity = 27/98 (27.55%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 240 SSSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEVLRRIWEYIKVN 299
           S SK+ + +N+S      +       V++S  L  F G +  E+ +++V++ IW+YIK +
Sbjct: 102 SKSKRKKKKNDSP----DSNSISVRKVLLSAPLQKFLGSE--ELPRTQVVKMIWQYIKEH 161

Query: 300 HLEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRH 338
            L++P +   +LCD K+  +FG + ++   + ++L +H
Sbjct: 162 DLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKH 192

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BLAST of Cla003271 vs. Swiss-Prot
Match: UAF30_SCHPO (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spp27 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-13
Identity = 54/158 (34.18%), Postives = 79/158 (50.00%), Query Frame = 1


Query: 81  QQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQPPPVKAESAV-SPTVPGSDP 140
           ++++  L + +KDL AL     F    +P+        A     K + A  + T  G  P
Sbjct: 31  ERRKVDLSAHKKDLNALILKC-FDETAAPSEKESLEKQAPARKTKGKRATENGTEEGKKP 90

Query: 141 PKESTQTKT--------KRRGGPGG--LNKLCGVSPELQAIVGQPELPRTEIVKQLWAYI 200
            K + + K         KR   P    LNK   +SP+L   +G  +L R + VK+LW YI
Sbjct: 91  AKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYI 150

Query: 201 RKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL 228
           + ++LQDP++KR I+C+D+L+ VFE D   MF MNK L
Sbjct: 151 KAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYL 187

HSP 2 Score: 48.5 bits (114), Expect = 1.7e-04
Identity = 27/96 (28.12%), Postives = 52/96 (54.17%), Query Frame = 1


Query: 235 EPTKPSSSKKARVENESTVGVK--GAEPSICP---SVIISEALASFFGVDGREMLQSEVL 294
           E  KP+   + R E+    G +    +P+  P    + +S  LA F G++  ++ + + +
Sbjct: 85  EGKKPAKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLE--QLSRPQTV 144

Query: 295 RRIWEYIKVNHLEDPLNPMAVLCDVKLRELFGCESI 326
           +++WEYIK + L+DP +   +LCD KL+ +F  +++
Sbjct: 145 KKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTL 178

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BLAST of Cla003271 vs. Swiss-Prot
Match: UAF30_YEAST (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UAF30 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.5e-13
Identity = 36/78 (46.15%), Postives = 58/78 (74.36%), Query Frame = 1


Query: 163 VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 222
           +S  L +++G+ EL RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKS-TNMFE 185

Query: 223 MNKLLAKHIIPLEPTKPS 241
           M+K+LA H+   EP K S
Sbjct: 186 MHKILASHM--TEPKKIS 200

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BLAST of Cla003271 vs. Swiss-Prot
Match: MEOX2_HUMAN (Homeobox protein MOX-2 OS=Homo sapiens GN=MEOX2 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 5.6e-08
Identity = 46/152 (30.26%), Postives = 61/152 (40.13%), Query Frame = 1


Query: 13  CLLRDSASATNPNPFSSLNAVVQELQT-----KLGLDLSHKVDFIHAQIQFILRSHPQQP 72
           CL    A+A   +PFS  +  +          +L    S  +   +   + +  S   + 
Sbjct: 8   CLRSPHATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEEGMFASQHHRG 67

Query: 73  HHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQP----PP 132
           HHHH+HH HHHHHQQQQ Q         AL  + +     SP S+A H+   QP    PP
Sbjct: 68  HHHHHHHHHHHHHQQQQHQ---------ALQTNWHLPQMSSPPSAARHSLCLQPDSGGPP 127

Query: 133 VKAESAVSPTVPGSDPPKESTQTKTKRRGGPG 156
              E   SP V  S+     + T T     PG
Sbjct: 128 ---ELGSSPPVLCSNSSSLGSSTPTGAACAPG 147

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BLAST of Cla003271 vs. Swiss-Prot
Match: NR4A3_HUMAN (Nuclear receptor subfamily 4 group A member 3 OS=Homo sapiens GN=NR4A3 PE=1 SV=3)

HSP 1 Score: 57.4 bits (137), Expect = 3.6e-07
Identity = 38/97 (39.18%), Postives = 46/97 (47.42%), Query Frame = 1


Query: 64  PQQPHHHHNHHQHHHHHQQQQQQ--LP--SSQKDLFALHQSPNFQSAP--SPTSSAFHTF 123
           P   HHHH+HH HHHHHQQQ QQ  +P  SS +D      S  F+ +P  +PT+ AF   
Sbjct: 92  PSYHHHHHHHHHHHHHHQQQHQQPSIPPASSPEDEVLPSTSMYFKQSPPSTPTTPAF--- 151

Query: 124 TAQPPPVKA-ESAVSPTVPGS-------DPPKESTQT 147
              PP   A      P+ PG        DPP ++  T
Sbjct: 152 ---PPQAGALWDEALPSAPGCIAPGPLLDPPMKAVPT 182

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BLAST of Cla003271 vs. TrEMBL
Match: A0A0A0LEG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 9.4e-188
Identity = 326/343 (95.04%), Postives = 332/343 (96.79%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120
           RSHPQQPHHH +HH HHHH QQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ
Sbjct: 61  RSHPQQPHHHQHHH-HHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120

Query: 121 PPPVKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPP K +S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENES V VK AEPSICPSVIISEALA+FFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRRS 344
           LEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Cla003271 vs. TrEMBL
Match: M5WHH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008138mg PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.7e-118
Identity = 228/351 (64.96%), Postives = 261/351 (74.36%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNP----FSSLNAVVQELQTKLGLDLSHKVDFIHAQI 60
           MVT+QE+SQA+Q L+ D+ S  NPN     F++LN VVQ+L+++LGLDLSHK DFI  QI
Sbjct: 1   MVTEQEISQALQALIHDTTS--NPNTTTPTFTTLNDVVQQLESRLGLDLSHKTDFIRTQI 60

Query: 61  QFILRSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHT 120
            +  RSHP  P     H Q      Q Q   P   KD FAL+Q PN+     PT SAF T
Sbjct: 61  HYFFRSHPPTPQPQPQHQQQQQQQHQHQLPQPQHPKDHFALNQPPNYHH---PTPSAFQT 120

Query: 121 FTAQPPP--VKAE--SAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVG 180
           F++QPPP  +K E  SA   +V GS+ PK+S + K KR+GGPGGLNKLCGVSPELQ IVG
Sbjct: 121 FSSQPPPPLLKPEPGSAAPVSVSGSNTPKDSAKPKAKRKGGPGGLNKLCGVSPELQVIVG 180

Query: 181 QPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII 240
            P LPRTEIVKQLWAYIRKNNLQDP NKRKIICN+ELRLVFETDCTDMFKMNKLLAKHII
Sbjct: 181 HPTLPRTEIVKQLWAYIRKNNLQDPGNKRKIICNEELRLVFETDCTDMFKMNKLLAKHII 240

Query: 241 PLEPTKPSSSKKARVENESTVG-VKGAEPSICPSVIISEALASFFGVDGREMLQSEVLRR 300
            LEP+K S  KK +V   +     K  EP   PS+IISEALA+FFGV  REMLQSEVL R
Sbjct: 241 ALEPSKQSVPKKPKVPKVAVESRTKSTEPG--PSLIISEALANFFGVGAREMLQSEVLMR 300

Query: 301 IWEYIKVNHLEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRR 343
           IWEYIKVNHLEDP NPMA+ CD KL+E+FGCESISAL IP++L RHHIFRR
Sbjct: 301 IWEYIKVNHLEDPQNPMAIQCDAKLQEIFGCESISALEIPDILERHHIFRR 344

[Close]

BLAST of Cla003271 vs. TrEMBL
Match: G7J046_MEDTR (SWIB/MDM2 domain protein OS=Medicago truncatula GN=MTR_3g055330 PE=4 SV=2)

HSP 1 Score: 416.4 bits (1069), Expect = 3.4e-113
Identity = 225/354 (63.56%), Postives = 259/354 (73.16%), Query Frame = 1


Query: 2   VTDQELSQAIQCLLRDSASATNPNP--FSSLNAVVQELQTKLG-LDLSHKVDFIHAQIQF 61
           VT++E+  AI  L  +    TNP    F++LN VV ELQ+KLG  DL+HK+DFI  QI  
Sbjct: 4   VTEEEICSAIHSLFTE----TNPRTRTFTTLNQVVSELQSKLGGYDLTHKIDFITEQINL 63

Query: 62  ILRSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQ---------KDLFALHQSPNFQSAPSP 121
           +  +  Q    H   H HHH  QQ QQ  P  Q         KD F LHQ+PN  S P  
Sbjct: 64  LFAASSQ----HQQQHVHHHQQQQLQQPPPPQQQPQLISFERKDHFTLHQNPNSHSVP-- 123

Query: 122 TSSAFHTFTAQPPPVKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQA 181
            +SAF           A+++V+  V  +  PKES Q K KRRGGPGGLNKLCGVSPELQ 
Sbjct: 124 VTSAFRNNVVVSSAAVADASVAH-VSANVLPKESAQPKPKRRGGPGGLNKLCGVSPELQV 183

Query: 182 IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAK 241
           IVGQP +PRTEIVKQLWAYI+KNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLLAK
Sbjct: 184 IVGQPAMPRTEIVKQLWAYIKKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAK 243

Query: 242 HIIPLEPTKPSSSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEVL 301
           HII LEPTK  + KK +VE E  VG + AEP+  PSVIIS++LA+FFGV GREMLQ+EVL
Sbjct: 244 HIIALEPTKKPAPKKQKVEVE--VGTRSAEPAPTPSVIISDSLANFFGVTGREMLQTEVL 303

Query: 302 RRIWEYIKVNHLEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRRS 344
           RRIWEYIKVN LEDP+NPMA++CD KL+E+FGCESISALGIPEVLGRHHIFRRS
Sbjct: 304 RRIWEYIKVNQLEDPVNPMAIMCDAKLQEIFGCESISALGIPEVLGRHHIFRRS 344

[Close]

BLAST of Cla003271 vs. TrEMBL
Match: A0A0B2NQZ2_GLYSO (Upstream activation factor subunit spp27 OS=Glycine soja GN=glysoja_006348 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 3.4e-113
Identity = 227/355 (63.94%), Postives = 262/355 (73.80%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVT++E+S+A+Q LLR+S    NP+ F++LN VV+ELQ KLG DL+HK+DFI AQI  + 
Sbjct: 1   MVTEEEISEAVQSLLRES----NPSRFTTLNQVVEELQAKLGHDLTHKIDFITAQINLLF 60

Query: 61  --RSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFT 120
             R  PQ PH              +Q Q P   KD FA   +PNF SAP         F+
Sbjct: 61  GSRQPPQNPH--------------RQLQQP---KDHFAPPPNPNFHSAPVSVGFQLQNFS 120

Query: 121 AQPPPVKAESAV------SPTVP----GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ 180
           +    V A +A       +P+ P    G+  PKESTQTK KRRGGPGGL K+CGVSPELQ
Sbjct: 121 SSNAVVAAATAADASRIEAPSAPVVVEGNQVPKESTQTKVKRRGGPGGLTKICGVSPELQ 180

Query: 181 AIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLA 240
            IVGQP L RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLL+
Sbjct: 181 VIVGQPALSRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLS 240

Query: 241 KHIIPLEPTKPSSSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEV 300
           KHIIPLEPTK    KK +V+ ES  G + AEP+  PSVIIS+ALA+FFG+ GREMLQSEV
Sbjct: 241 KHIIPLEPTKKPVPKKQKVDVES--GTRSAEPT--PSVIISDALANFFGITGREMLQSEV 300

Query: 301 LRRIWEYIKVNHLEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRRS 344
           LRRIWEYIKVN LEDP NPMA++CD KL+E+FGCESISALGIPEVLGRHHIFR S
Sbjct: 301 LRRIWEYIKVNQLEDPANPMAIVCDGKLQEIFGCESISALGIPEVLGRHHIFRSS 330

[Close]

BLAST of Cla003271 vs. TrEMBL
Match: I1KYE8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G324000 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 3.4e-113
Identity = 227/355 (63.94%), Postives = 262/355 (73.80%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVT++E+S+A+Q LLR+S    NP+ F++LN VV+ELQ KLG DL+HK+DFI AQI  + 
Sbjct: 1   MVTEEEISEAVQSLLRES----NPSRFTTLNQVVEELQAKLGHDLTHKIDFITAQINLLF 60

Query: 61  --RSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFT 120
             R  PQ PH              +Q Q P   KD FA   +PNF SAP         F+
Sbjct: 61  GSRQPPQNPH--------------RQLQQP---KDHFAPPPNPNFHSAPVSVGFQLQNFS 120

Query: 121 AQPPPVKAESAV------SPTVP----GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ 180
           +    V A +A       +P+ P    G+  PKESTQTK KRRGGPGGL K+CGVSPELQ
Sbjct: 121 SSNAVVAAATAADASRIEAPSAPVVVEGNQVPKESTQTKVKRRGGPGGLTKICGVSPELQ 180

Query: 181 AIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLA 240
            IVGQP L RTEIVKQLWAYIRKNNLQDPSNKRKIICNDELR+VFETDCTDMFKMNKLL+
Sbjct: 181 VIVGQPALSRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLS 240

Query: 241 KHIIPLEPTKPSSSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEV 300
           KHIIPLEPTK    KK +V+ ES  G + AEP+  PSVIIS+ALA+FFG+ GREMLQSEV
Sbjct: 241 KHIIPLEPTKKPVPKKQKVDVES--GTRSAEPT--PSVIISDALANFFGITGREMLQSEV 300

Query: 301 LRRIWEYIKVNHLEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRRS 344
           LRRIWEYIKVN LEDP NPMA++CD KL+E+FGCESISALGIPEVLGRHHIFR S
Sbjct: 301 LRRIWEYIKVNQLEDPANPMAIVCDGKLQEIFGCESISALGIPEVLGRHHIFRSS 330

[Close]

BLAST of Cla003271 vs. NCBI nr
Match: gi|659093750|ref|XP_008447697.1| (PREDICTED: uncharacterized protein LOC103490111 [Cucumis melo])

HSP 1 Score: 666.0 bits (1717), Expect = 3.5e-188
Identity = 326/343 (95.04%), Postives = 331/343 (96.50%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120
           RSHPQQPHHH +HH HHH  QQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPVKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PP  KA+S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENES V VK AEPSICPSVIISEALA+FFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRRS 344
           LEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cla003271 vs. NCBI nr
Match: gi|449465075|ref|XP_004150254.1| (PREDICTED: angiomotin [Cucumis sativus])

HSP 1 Score: 664.1 bits (1712), Expect = 1.3e-187
Identity = 326/343 (95.04%), Postives = 332/343 (96.79%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNPFSSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120
           RSHPQQPHHH +HH HHHH QQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ
Sbjct: 61  RSHPQQPHHHQHHH-HHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120

Query: 121 PPPVKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPP K +S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENES V VK AEPSICPSVIISEALA+FFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRRS 344
           LEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Cla003271 vs. NCBI nr
Match: gi|1009165816|ref|XP_015901247.1| (PREDICTED: uncharacterized protein LOC107434308 [Ziziphus jujuba])

HSP 1 Score: 471.1 bits (1211), Expect = 1.7e-129
Identity = 241/342 (70.47%), Postives = 272/342 (79.53%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNPFSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60
           MVTDQE+ Q +Q L+R+S+S  NPN  ++L+ VVQ+L++KLG+DLSHK DFI AQIQ + 
Sbjct: 12  MVTDQEILQGLQSLIRESSS--NPNGLNTLSDVVQQLESKLGVDLSHKSDFIRAQIQLLF 71

Query: 61  RSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120
           RSHP QPH H  HH  H  H        S  KD FA HQ+PNF     PT SAF TF++Q
Sbjct: 72  RSHPPQPHPHQLHHHQHPQH--------SHPKDHFAPHQNPNFHH---PTPSAFQTFSSQ 131

Query: 121 PPPVKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPP K E+A S  V  S+PPK+STQTK K+RGGPGGLNKLCGVSPELQ IVGQP LPRTE
Sbjct: 132 PPPPKPEAAASVAVAPSEPPKDSTQTKPKKRGGPGGLNKLCGVSPELQTIVGQPALPRTE 191

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTK +
Sbjct: 192 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKQA 251

Query: 241 SSKKARVENESTVGVKGAEPSICPSVIISEALASFFGVDGREMLQSEVLRRIWEYIKVNH 300
           + K+ +V +   V  +       PSVIISEALA+FFGV  REMLQSEVLRR+WEYIKVNH
Sbjct: 252 APKRRKVVD---VEAETKSTESGPSVIISEALANFFGVGEREMLQSEVLRRVWEYIKVNH 311

Query: 301 LEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRR 343
           LEDPLN MA+LCD KL+ELFGC+SISALGIPEVL RHHIFRR
Sbjct: 312 LEDPLNQMAILCDAKLQELFGCQSISALGIPEVLARHHIFRR 337

[Close]

BLAST of Cla003271 vs. NCBI nr
Match: gi|645241394|ref|XP_008227057.1| (PREDICTED: upstream activation factor subunit spp27-like [Prunus mume])

HSP 1 Score: 436.0 bits (1120), Expect = 6.0e-119
Identity = 234/354 (66.10%), Postives = 267/354 (75.42%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNP----FSSLNAVVQELQTKLGLDLSHKVDFIHAQI 60
           MVT+QE+SQA+Q L+ D+ S  NPN     F++LN VVQ+L+++LGLDLSHK DFI  QI
Sbjct: 1   MVTEQEISQALQALIHDTTS--NPNTTTPTFTTLNDVVQQLESRLGLDLSHKTDFIRTQI 60

Query: 61  QFILRSHPQQPHHHHN-HHQHHHHHQQQQQQLPSSQ--KDLFALHQSPNFQSAPSPTSSA 120
            +  RSHP  P       HQ     QQ Q QLP  Q  KD FAL+Q PN+     PT SA
Sbjct: 61  HYFFRSHPPTPQPQPQPQHQQQQQQQQHQHQLPQPQHPKDHFALNQPPNYHH---PTPSA 120

Query: 121 FHTFTAQPPP--VKAE--SAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQA 180
           F TF++QPPP  +K E  SA   +V GS+ PK+S + K KR+GGPGGLNKLCGVSPELQA
Sbjct: 121 FQTFSSQPPPPLLKPEPGSAAPVSVSGSNTPKDSAKPKAKRKGGPGGLNKLCGVSPELQA 180

Query: 181 IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAK 240
           IVG P LPRTEIVKQLWAYIRKNNLQDP NKRKIICN+ELRLVFETDCTDMFKMNKLLAK
Sbjct: 181 IVGHPTLPRTEIVKQLWAYIRKNNLQDPGNKRKIICNEELRLVFETDCTDMFKMNKLLAK 240

Query: 241 HIIPLEPTKPSSSKKARVENEST-VGVKGAEPSICPSVIISEALASFFGVDGREMLQSEV 300
           HII LEP+K S  KK +V   +   G K  EP   PS+IISEALA+FFGV  REMLQSEV
Sbjct: 241 HIIALEPSKQSVPKKPKVPKVAVESGTKSTEPG--PSLIISEALANFFGVGVREMLQSEV 300

Query: 301 LRRIWEYIKVNHLEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRR 343
           L RIWEYIKVNHLEDP NPMA+ CD KL+E+FGCESISAL IP++L RHHIFRR
Sbjct: 301 LMRIWEYIKVNHLEDPQNPMAIQCDAKLQEIFGCESISALEIPDILERHHIFRR 347

[Close]

BLAST of Cla003271 vs. NCBI nr
Match: gi|595863140|ref|XP_007211527.1| (hypothetical protein PRUPE_ppa008138mg [Prunus persica])

HSP 1 Score: 433.3 bits (1113), Expect = 3.9e-118
Identity = 228/351 (64.96%), Postives = 261/351 (74.36%), Query Frame = 1


Query: 1   MVTDQELSQAIQCLLRDSASATNPNP----FSSLNAVVQELQTKLGLDLSHKVDFIHAQI 60
           MVT+QE+SQA+Q L+ D+ S  NPN     F++LN VVQ+L+++LGLDLSHK DFI  QI
Sbjct: 1   MVTEQEISQALQALIHDTTS--NPNTTTPTFTTLNDVVQQLESRLGLDLSHKTDFIRTQI 60

Query: 61  QFILRSHPQQPHHHHNHHQHHHHHQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHT 120
            +  RSHP  P     H Q      Q Q   P   KD FAL+Q PN+     PT SAF T
Sbjct: 61  HYFFRSHPPTPQPQPQHQQQQQQQHQHQLPQPQHPKDHFALNQPPNYHH---PTPSAFQT 120

Query: 121 FTAQPPP--VKAE--SAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVG 180
           F++QPPP  +K E  SA   +V GS+ PK+S + K KR+GGPGGLNKLCGVSPELQ IVG
Sbjct: 121 FSSQPPPPLLKPEPGSAAPVSVSGSNTPKDSAKPKAKRKGGPGGLNKLCGVSPELQVIVG 180

Query: 181 QPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII 240
            P LPRTEIVKQLWAYIRKNNLQDP NKRKIICN+ELRLVFETDCTDMFKMNKLLAKHII
Sbjct: 181 HPTLPRTEIVKQLWAYIRKNNLQDPGNKRKIICNEELRLVFETDCTDMFKMNKLLAKHII 240

Query: 241 PLEPTKPSSSKKARVENESTVG-VKGAEPSICPSVIISEALASFFGVDGREMLQSEVLRR 300
            LEP+K S  KK +V   +     K  EP   PS+IISEALA+FFGV  REMLQSEVL R
Sbjct: 241 ALEPSKQSVPKKPKVPKVAVESRTKSTEPG--PSLIISEALANFFGVGAREMLQSEVLMR 300

Query: 301 IWEYIKVNHLEDPLNPMAVLCDVKLRELFGCESISALGIPEVLGRHHIFRR 343
           IWEYIKVNHLEDP NPMA+ CD KL+E+FGCESISAL IP++L RHHIFRR
Sbjct: 301 IWEYIKVNHLEDPQNPMAIQCDAKLQEIFGCESISALEIPDILERHHIFRR 344

The following BLAST results are available for this feature:

BLAST of Cla003271 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRI1_YEAST	1.5e-13	38.24	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRI1 PE...	[more]
UAF30_SCHPO	1.5e-13	34.18	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
UAF30_YEAST	7.5e-13	46.15	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
MEOX2_HUMAN	5.6e-08	30.26	Homeobox protein MOX-2 OS=Homo sapiens GN=MEOX2 PE=1 SV=2	[more]
NR4A3_HUMAN	3.6e-07	39.18	Nuclear receptor subfamily 4 group A member 3 OS=Homo sapiens GN=NR4A3 PE=1 SV=3	[more]

BLAST of Cla003271 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG4_CUCSA	9.4e-188	95.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G758990 PE=4 SV=1	[more]
M5WHH4_PRUPE	2.7e-118	64.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008138mg PE=4 SV=1	[more]
G7J046_MEDTR	3.4e-113	63.56	SWIB/MDM2 domain protein OS=Medicago truncatula GN=MTR_3g055330 PE=4 SV=2	[more]
A0A0B2NQZ2_GLYSO	3.4e-113	63.94	Upstream activation factor subunit spp27 OS=Glycine soja GN=glysoja_006348 PE=4 ...	[more]
I1KYE8_SOYBN	3.4e-113	63.94	Uncharacterized protein OS=Glycine max GN=GLYMA_08G324000 PE=4 SV=1	[more]

BLAST of Cla003271 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659093750\|ref\|XP_008447697.1\|	3.5e-188	95.04	PREDICTED: uncharacterized protein LOC103490111 [Cucumis melo]	[more]
gi\|449465075\|ref\|XP_004150254.1\|	1.3e-187	95.04	PREDICTED: angiomotin [Cucumis sativus]	[more]
gi\|1009165816\|ref\|XP_015901247.1\|	1.7e-129	70.47	PREDICTED: uncharacterized protein LOC107434308 [Ziziphus jujuba]	[more]
gi\|645241394\|ref\|XP_008227057.1\|	6.0e-119	66.10	PREDICTED: upstream activation factor subunit spp27-like [Prunus mume]	[more]
gi\|595863140\|ref\|XP_007211527.1\|	3.9e-118	64.96	hypothetical protein PRUPE_ppa008138mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003121	SWIB_MDM2_domain
IPR014876	DEK_C
IPR019835	SWIB_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla003271	Cla003271	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla003271	Cla003271.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla003271.1.cds1	Cla003271.1.cds1	CDS
Cla003271.1.cds2	Cla003271.1.cds2	CDS
Cla003271.1.cds3	Cla003271.1.cds3	CDS
Cla003271.1.cds4	Cla003271.1.cds4	CDS
Cla003271.1.cds5	Cla003271.1.cds5	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003121	SWIB/MDM2 domain	GENE3D	G3DSA:1.10.245.10		coord: 265..339 score: 5.5E-19coord: 149..238 score: 2.8
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 160..231 score: 5.7E-28coord: 267..337 score: 3.3
IPR003121	SWIB/MDM2 domain	unknown	SSF47592	SWIB/MDM2 domain	coord: 260..338 score: 5.56E-18coord: 150..236 score: 5.4
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 2..59 score: 1.
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 157..236 score: 1.2E-44coord: 262..343 score: 1.
None	No IPR available	PANTHER	PTHR13844	BRG-1 ASSOCIATED FACTOR 60 BAF60	coord: 115..343 score: 1.1E-151coord: 1..92 score: 1.1E
None	No IPR available	PANTHER	PTHR13844:SF14	SUBFAMILY NOT NAMED	coord: 1..92 score: 1.1E-151coord: 115..343 score: 1.1E