Cla001944.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001944
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Nicotinate-nucleotide pyrophosphorylase (AHRD V1 ***- B9SJ41_RICCO); contains Interpro domain(s) IPR002638 Quinolinate phosphoribosyl transferase
Location	Chr7 : 13375877 .. 13378185 (+)
Sequence length	375

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACATCTGTATCCAAAGATTCTGGGATATCAGTTGCATCAGTAGCAATCCAGCCTCCATCTCACCCTACCTATGATCTGCGTGGCATCATCCAGTTAGCCCTTGCAGAAGATTCTGCTGACTTTGGTATAATGGATTATTTTATTATTAACTATTTAGAAGATTATATGGTGATGTTTGGGATTACCTCACATTCATTGTGATCAAATTGCAACCGAAGATTAAAAAAAAGAAAAAAAAAAAAGAACTAGTTGCTGGAATTTCATTTGCCAGGGCCCCGTTTGGTAATCATTTGGTTTTTGGTTTTTGTTTTTGAAAATTAAGCCTATAGAGACTACTTTCACTTTCAAATTTTTTTCTTTGTTATCTACTTTTTACAAATGGTTTAAAAAACCAAGCCAAAATTTGAAAACTAAAAAAAGTAGCTTTTAAAAACTTGTTTTTGTTAACCACCATGGGTTGGCTTGATGGTAAAAGAGGAGACATAGTCTTAATAAATGGCTAAGAGATCATGTGGTTCAATCCATGGTAGCCACCTACGTAGGATTTAATATCCTATGAGTTTCCTTGACACCCAAATGTTGTAGGGTTAGGCGGGTTGTCCTGTGGATTAGTCGAGGTGCGCGTAAACTGGCACACACTCACGGATATAAAAAAAAAAATAATTGTTTTGGTTTTGAAATTTGGCTAAGAATTCAACCATTGTAATTAAGAAAAATACAAATCATTATAAGAAATGAGGAGGAAATAGGTTTAATTTTCAAAAAACAGAAACAGAAAACGAAATCGATACCAAACGGGAGGCAAGTAATCCTTAGCATAGTGTTTGCTTCCTAGATATGGCTTTGAGTTGGATAAGAGGTCTATAGAAGCATTCAAATCATCTGTGTATCAATGTAGTTAGATTTTCAAGTTAAGATCTAATCTACTTGAGTTAGTTCTTTTTTTTTTCCCCCCGCCCTAAGTGAAGCCGCTGTGACTGAGGTCCATCAAGACAATAGAATTTTAAGCGATTTCCATTTAAGGATCTCCTAACCAATGCTTATATATCCAAGTCGTATACCATGATATTCTACCATTTTCTTTATCATTTTTCTATTGTTTTCCTTTGTGAGCAGCATTCTCAAATCTGATTTTAGATCAATTTCTATTTCCCAACAACCATTCTAATGGGCCAACTTCCAATCACATAGACCTAGCAGCCTGCATCAGATTGATTACGTCTCCTGCATGGGATGTCATGCCTGGGATGCATTTTAAGATTCACTTCCTGAGGCATCATGTTTATATCAGGAACCATAGAATTGAAATAAAAACCAAAGAGTTGAAATAGGATTGTATTGATAACTTGCAGGATATAGAAATAGGGAAAAACAACACCCCCAAATTTGAGGAACTTTGATGCCTCCTTAAGCAAACTCGAGCTCAAACAACTAATTAGTTGCTAACTTTCACCCCCTCCTGCTCAGCCCTTTTGTAGTCATTTTCTACTAATAGACTCCCTAACAAATGACTAACATATCAATCCTTAGTATCCTCTTAATATTTCTAACATTTATCCTGATAGTATTCTTAATATAATTGTAGGTGATGTAACATCTTTGGCTACCATTCCCTCTGACATGCTAGTGGATGCTTTCTTTTTGGCCAAAGAGGATGGCATTGTTGCCGGTATTGCTCTTGCAAACATGGTGTTCCAGGAGGTTGATCCTTCGATTAGGGTAATGTTGATGTTCTCTCTTATCCCTCCCTGACCCTCTTCATTTTGGTTCTTATTGAGTTATTTATGAGATGGATGTGTTCCCATTCATCCTGATCCACATTTTGTCTTCAGGTGGAATGGTCTCAAAAGGATGGAGATTATATTCATAAAGGACTACAATTTGGAAAAGTTTCAGGTAAGAATGGAGAATATCTAGGAAGCCTAACAAAACTCCGTGTTGAGTATAGTGTTGGAATGAGATACTCCAAACACATGATTTGAAGTGCTTGATTTTTATTTTTTTTATATGTTTGGACATGCTCATGAGAAAGAGTTGGGTGGCTGATTGATTTGGTTAGCCTTGCAAGGCTCTCCTTCTTTGACAATTTATCTATGAATTTTTCCAACACTTCATCCTTATCCAAGTTTTTCAATGTAGGGGATCTAGCTATTAGGATCTTCTTTCTCTATAGCAAAATGGCTATGGTGCTCTCATTGAGAGCCTAATATTTTGTGGCATTGGAAATTATGATCTAGTATGTTTGTAAGTGTGCAGGGTGGGTTTTGACCTTTGTGACTAAGGCACTTCAAGGAGTAAAGTAA

mRNA sequence

ATGTCTACATCTGTATCCAAAGATTCTGGGATATCAGTTGCATCAGTAGCAATCCAGCCTCCATCTCACCCTACCTATGATCTGCGTGGCATCATCCAGTTAGCCCTTGCAGAAGATTCTGCTGACTTTGGTGATGTAACATCTTTGGCTACCATTCCCTCTGACATGCTAGTGGATGCTTTCTTTTTGGCCAAAGAGGATGGCATTGTTGCCGGTATTGCTCTTGCAAACATGGTGTTCCAGGAGGTTGATCCTTCGATTAGGGTGGAATGGTCTCAAAAGGATGGAGATTATATTCATAAAGGACTACAATTTGGAAAAGTTTCAGGGTGGGTTTTGACCTTTGTGACTAAGGCACTTCAAGGAGTAAAGTAA

Coding sequence (CDS)

ATGTCTACATCTGTATCCAAAGATTCTGGGATATCAGTTGCATCAGTAGCAATCCAGCCTCCATCTCACCCTACCTATGATCTGCGTGGCATCATCCAGTTAGCCCTTGCAGAAGATTCTGCTGACTTTGGTGATGTAACATCTTTGGCTACCATTCCCTCTGACATGCTAGTGGATGCTTTCTTTTTGGCCAAAGAGGATGGCATTGTTGCCGGTATTGCTCTTGCAAACATGGTGTTCCAGGAGGTTGATCCTTCGATTAGGGTGGAATGGTCTCAAAAGGATGGAGATTATATTCATAAAGGACTACAATTTGGAAAAGTTTCAGGGTGGGTTTTGACCTTTGTGACTAAGGCACTTCAAGGAGTAAAGTAA

Protein sequence

MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDAFFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSGWVLTFVTKALQGVK

Homology

[Close]

BLAST of Cla001944 vs. Swiss-Prot
Match: NADC_ARATH (Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic OS=Arabidopsis thaliana GN=QPT PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-36
Identity = 72/110 (65.45%), Postives = 91/110 (82.73%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS S ++ +G    S+ I+PPSHPTYDL+ +I+LALAED+   GDVT +ATIP DM V+A
Sbjct: 22  MSASATQTAG--EVSMGIKPPSHPTYDLKAVIKLALAEDAGHTGDVTCMATIPFDMEVEA 81

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
           +FLAKEDGIVAG+ALA+M+F+ VDPS++VEW +KDGDY+HKGL+FGKVSG
Sbjct: 82  YFLAKEDGIVAGVALADMIFEHVDPSLKVEWMRKDGDYVHKGLKFGKVSG 129

[Close]

BLAST of Cla001944 vs. Swiss-Prot
Match: NADC_ORYSJ (Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0553600 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.6e-32
Identity = 61/97 (62.89%), Postives = 81/97 (83.51%), Query Frame = 1


Query: 14  ASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDAFFLAKEDGIVAGI 73
           A V + PP+HPTYDL+ +I LAL+ED+ D GDV+ LATIPSD+  +A F+AKEDG+VAGI
Sbjct: 56  ARVPVAPPAHPTYDLKAVINLALSEDAGDRGDVSCLATIPSDVKAEATFIAKEDGVVAGI 115

Query: 74  ALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
           +LA+M+F++VDPS++VEW + DG+Y+HKGLQFG+V G
Sbjct: 116 SLADMIFKQVDPSLKVEWFESDGNYVHKGLQFGRVYG 152

[Close]

BLAST of Cla001944 vs. Swiss-Prot
Match: NADC_RHORU (Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Rhodospirillum rubrum GN=nadC PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.5e-07
Identity = 33/101 (32.67%), Postives = 50/101 (49.50%), Query Frame = 1


Query: 21  PSHPT-----YDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDAFFLAKEDGIVAGIAL 80
           P+HP      + +   ++ ALAED    GD+TS ATIP+     A F+A++ GI+AG+  
Sbjct: 3   PNHPVAALSPFAIDEAVRRALAEDLGRAGDITSTATIPAATRAHARFVARQPGILAGLGC 62

Query: 81  ANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSGWVLTFV 117
           A   F  +D ++      +DG  I  G    +V+G   T +
Sbjct: 63  ARSAFALLDDTVTFTTPLEDGAEIAAGQTVAEVAGAARTIL 103

[Close]

BLAST of Cla001944 vs. TrEMBL
Match: B9HJA3_POPTR (Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Populus trichocarpa GN=POPTR_0008s12790g PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.2e-37
Identity = 76/110 (69.09%), Postives = 94/110 (85.45%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS + + + G+S  S+ ++PPSHPTYD++G+I+LALAED+ D GDVT LATIP DM V+A
Sbjct: 1   MSVAQTINPGVSFRSMVVKPPSHPTYDMKGVIKLALAEDAGDRGDVTCLATIPFDMEVEA 60

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
            FLAKEDGIVAGI+LA M+F EVDPS++VEWSQKDGDY+ KGLQFGKVSG
Sbjct: 61  HFLAKEDGIVAGISLAEMIFHEVDPSLKVEWSQKDGDYVQKGLQFGKVSG 110

[Close]

BLAST of Cla001944 vs. TrEMBL
Match: A0A068TXJ8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032828001 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.1e-37
Identity = 75/110 (68.18%), Postives = 94/110 (85.45%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS   +K++GI+ AS+ ++PP+HPTYDL+G+IQLAL+ED+ D GDVT  ATIP DM V+A
Sbjct: 25  MSAIATKNTGIAAASLGVKPPAHPTYDLKGVIQLALSEDAGDLGDVTCKATIPVDMEVEA 84

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
            FLAKEDGI+AGIALA MVF EVDP+++V+WS+KDGD IHKGLQFGKV G
Sbjct: 85  HFLAKEDGIIAGIALAEMVFNEVDPTLKVDWSRKDGDKIHKGLQFGKVHG 134

[Close]

BLAST of Cla001944 vs. TrEMBL
Match: B7FHY3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-36
Identity = 76/110 (69.09%), Postives = 92/110 (83.64%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS +   +  IS  S A++PP HPTYDL+GII+LALAED+ D GD+T LATIP DM V+A
Sbjct: 46  MSATEVTNPTISYESFAVKPPLHPTYDLKGIIKLALAEDAGDLGDITCLATIPFDMEVEA 105

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
           +FLAKEDGIVAGIALA M+F EVDPS++VEWS+KDGD++HKGLQFGKV G
Sbjct: 106 YFLAKEDGIVAGIALAEMIFNEVDPSLKVEWSKKDGDFVHKGLQFGKVHG 155

[Close]

BLAST of Cla001944 vs. TrEMBL
Match: I3S643_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-36
Identity = 76/110 (69.09%), Postives = 92/110 (83.64%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS +   +  IS  S A++PP HPTYDL+GII+LALAED+ D GD+T LATIP DM V+A
Sbjct: 46  MSATEVTNPTISYESFAVKPPLHPTYDLKGIIKLALAEDAGDLGDITCLATIPFDMEVEA 105

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
           +FLAKEDGIVAGIALA M+F EVDPS++VEWS+KDGD++HKGLQFGKV G
Sbjct: 106 YFLAKEDGIVAGIALAEMIFNEVDPSLKVEWSKKDGDFVHKGLQFGKVHG 155

[Close]

BLAST of Cla001944 vs. TrEMBL
Match: A0A072VQY4_MEDTR (Quinolinate phosphoribosyltransferase, putative OS=Medicago truncatula GN=MTR_1g030750 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-36
Identity = 76/110 (69.09%), Postives = 92/110 (83.64%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS +   +  IS  S A++PP HPTYDL+GII+LALAED+ D GD+T LATIP DM V+A
Sbjct: 46  MSATEVTNPTISYESFAVKPPLHPTYDLKGIIKLALAEDAGDLGDITCLATIPFDMEVEA 105

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
           +FLAKEDGIVAGIALA M+F EVDPS++VEWS+KDGD++HKGLQFGKV G
Sbjct: 106 YFLAKEDGIVAGIALAEMIFNEVDPSLKVEWSKKDGDFVHKGLQFGKVHG 155

[Close]

BLAST of Cla001944 vs. NCBI nr
Match: gi|778730689|ref|XP_011659842.1| (PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating])

HSP 1 Score: 208.4 bits (529), Expect = 7.3e-51
Identity = 105/110 (95.45%), Postives = 108/110 (98.18%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS SVSKDSGISVAS AIQPPSHPTYDLRGII+LALAEDSADFGDVTSLATIPSDMLVDA
Sbjct: 49  MSASVSKDSGISVASAAIQPPSHPTYDLRGIIKLALAEDSADFGDVTSLATIPSDMLVDA 108

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
           FFLAKEDGIVAGIALA+MVFQEVDPSIRVEWS+KDGDYIHKGLQFGKVSG
Sbjct: 109 FFLAKEDGIVAGIALADMVFQEVDPSIRVEWSKKDGDYIHKGLQFGKVSG 158

[Close]

BLAST of Cla001944 vs. NCBI nr
Match: gi|659109575|ref|XP_008454778.1| (PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating])

HSP 1 Score: 204.9 bits (520), Expect = 8.1e-50
Identity = 104/110 (94.55%), Postives = 107/110 (97.27%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS SVS DSGISVASVAIQPPSHPTYDLRGII+LALAEDSADFGDVTSLATIPSDMLVDA
Sbjct: 1   MSASVSNDSGISVASVAIQPPSHPTYDLRGIIKLALAEDSADFGDVTSLATIPSDMLVDA 60

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
           FFLAKEDGIVAGIALA+MVFQEVDPSIRVEWS+KDGDYI KGLQFGKVSG
Sbjct: 61  FFLAKEDGIVAGIALADMVFQEVDPSIRVEWSKKDGDYIRKGLQFGKVSG 110

[Close]

BLAST of Cla001944 vs. NCBI nr
Match: gi|659109569|ref|XP_008454775.1| (PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating])

HSP 1 Score: 204.9 bits (520), Expect = 8.1e-50
Identity = 104/110 (94.55%), Postives = 107/110 (97.27%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS SVS DSGISVASVAIQPPSHPTYDLRGII+LALAEDSADFGDVTSLATIPSDMLVDA
Sbjct: 49  MSASVSNDSGISVASVAIQPPSHPTYDLRGIIKLALAEDSADFGDVTSLATIPSDMLVDA 108

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
           FFLAKEDGIVAGIALA+MVFQEVDPSIRVEWS+KDGDYI KGLQFGKVSG
Sbjct: 109 FFLAKEDGIVAGIALADMVFQEVDPSIRVEWSKKDGDYIRKGLQFGKVSG 158

[Close]

BLAST of Cla001944 vs. NCBI nr
Match: gi|224101821|ref|XP_002312433.1| (quinolinate phosphoribosyl transferase family protein [Populus trichocarpa])

HSP 1 Score: 162.2 bits (409), Expect = 6.0e-37
Identity = 76/110 (69.09%), Postives = 94/110 (85.45%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS + + + G+S  S+ ++PPSHPTYD++G+I+LALAED+ D GDVT LATIP DM V+A
Sbjct: 1   MSVAQTINPGVSFRSMVVKPPSHPTYDMKGVIKLALAEDAGDRGDVTCLATIPFDMEVEA 60

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
            FLAKEDGIVAGI+LA M+F EVDPS++VEWSQKDGDY+ KGLQFGKVSG
Sbjct: 61  HFLAKEDGIVAGISLAEMIFHEVDPSLKVEWSQKDGDYVQKGLQFGKVSG 110

[Close]

BLAST of Cla001944 vs. NCBI nr
Match: gi|743784718|ref|XP_011023185.1| (PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating])

HSP 1 Score: 162.2 bits (409), Expect = 6.0e-37
Identity = 76/110 (69.09%), Postives = 94/110 (85.45%), Query Frame = 1


Query: 1   MSTSVSKDSGISVASVAIQPPSHPTYDLRGIIQLALAEDSADFGDVTSLATIPSDMLVDA 60
           MS + + + G+S  S+ ++PPSHPTYD++G+I+LALAED+ D GDVT LATIP DM V+A
Sbjct: 25  MSVAQTINPGVSFRSMVVKPPSHPTYDMKGVIKLALAEDAGDRGDVTCLATIPFDMEVEA 84

Query: 61  FFLAKEDGIVAGIALANMVFQEVDPSIRVEWSQKDGDYIHKGLQFGKVSG 111
            FLAKEDGIVAGI+LA M+F EVDPS++VEWSQKDGDY+ KGLQFGKVSG
Sbjct: 85  HFLAKEDGIVAGISLAEMIFHEVDPSLKVEWSQKDGDYVQKGLQFGKVSG 134

The following BLAST results are available for this feature:

BLAST of Cla001944 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NADC_ARATH	1.7e-36	65.45	Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic OS=Arabid...	[more]
NADC_ORYSJ	2.6e-32	62.89	Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic OS=Oryza ...	[more]
NADC_RHORU	6.5e-07	32.67	Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Rhodospirill...	[more]

BLAST of Cla001944 vs. TrEMBL


Match Name	E-value	Identity	Description
B9HJA3_POPTR	4.2e-37	69.09	Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Populus trichocarpa G...	[more]
A0A068TXJ8_COFCA	7.1e-37	68.18	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032828001 PE=4 SV=1	[more]
B7FHY3_MEDTR	1.6e-36	69.09	Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
I3S643_MEDTR	1.6e-36	69.09	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
A0A072VQY4_MEDTR	1.6e-36	69.09	Quinolinate phosphoribosyltransferase, putative OS=Medicago truncatula GN=MTR_1g...	[more]

BLAST of Cla001944 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730689\|ref\|XP_011659842.1\|	7.3e-51	95.45	PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating]	[more]
gi\|659109575\|ref\|XP_008454778.1\|	8.1e-50	94.55	PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating]	[more]
gi\|659109569\|ref\|XP_008454775.1\|	8.1e-50	94.55	PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating]	[more]
gi\|224101821\|ref\|XP_002312433.1\|	6.0e-37	69.09	quinolinate phosphoribosyl transferase family protein [Populus trichocarpa]	[more]
gi\|743784718\|ref\|XP_011023185.1\|	6.0e-37	69.09	PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR022412	Quinolinate_PRibosylTrfase_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0016763	transferase activity, transferring pentosyl groups

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046497	nicotinate nucleotide metabolic process
biological_process	GO:0009435	NAD biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016763	transferase activity, transferring pentosyl groups
molecular_function	GO:0004514	nicotinate-nucleotide diphosphorylase (carboxylating) activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla001944	Cla001944	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla001944	Cla001944.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla001944.1.cds1	Cla001944.1.cds1	CDS
Cla001944.1.cds2	Cla001944.1.cds2	CDS
Cla001944.1.cds3	Cla001944.1.cds3	CDS
Cla001944.1.cds4	Cla001944.1.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022412	Quinolinate phosphoribosyl transferase, N-terminal	GENE3D	G3DSA:3.90.1170.20		coord: 19..112 score: 1.8
IPR022412	Quinolinate phosphoribosyl transferase, N-terminal	PFAM	PF02749	QRPTase_N	coord: 42..110 score: 1.6
None	No IPR available	PANTHER	PTHR32179	FAMILY NOT NAMED	coord: 6..112 score: 1.1
None	No IPR available	PANTHER	PTHR32179:SF3	NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING]	coord: 6..112 score: 1.1
None	No IPR available	unknown	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like	coord: 19..116 score: 5.1