Cla001780.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCAACCATTTGAACCTGTTCAACAGGATGATGAACAACAACAGAACCAACCCAACAGAATCTGCCACTGTTTAACATCTGGGTACTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCTTTCTATTTCTTTGGAGGGTTTTTGTTTGATGGTTTTGGTTTCTCAGGTTGGGAATTGGAGCTGAGGTTTTGTGTGATGAATCATTGGCTTATTTTGAAAAACAATTTCGCCTGCTGGTACACTACACTACTTTCAAACTCCTATCTCTTCCTAACTAACATTTTCTTTTTTTTTTTTTTTAAGAAAAATTGAGCCTAATTTCATCTCACCTCTCATCTTCTTGAGAGAGAGAAGCAAGGAACCCTAATTTTTAAATCAGGTAGTTCTGTTCGGGCAAAAAAAAAAATTGAAGCAAATCGAATGGGCGGCAGAGAAAATAAAATGGGATGGAAGGAGAGGGAGGACTGAAAAAAATGAATCAAGAAACCCTAATCTTAAATTAAGTGGTTCGGTTTGAGCAAATCGGAAACCAAATCGAACCGGAAACCAAACCAAAGGTTTGGTGTTTAATAAAAACTGAGTAAACCAATTCAAATTGGTTTGATTAAGCTTTTTGTAATTTATAGGCTTGCTTTTCAAAAGTTAAAAAATGAAAAATCAAATTGTTATGAAAAAAGTTGTAATTTTCAAAATTTAAGTTGGTTTGAAATTCGTGGTTTTAAATCTAGGTGCGTGAGGAGGTGGAGACGCAATTGCAAGCTCACTTTAACCTCTCCCACCAATCATATTCTAGTTCAAGGTAATTTAATTTAATGCACGTCATAATTAGTTATACAACATTGATTACGTAATATAATGTGTGTTACTGAAGTTGATGTGTACTTGTGTAGTAGAAGTATGGAAGAAGTTGGTGTTATGGGGATGGTGAATTTAAGGTTACGTTTCATGAACAACATTCCATCCATCATATTCACCAAAGACAAGATCAAAGCCGAGAACCGGGAGGCAGTGGAAGTTGGATTATTTGATGCAACAAATAATAGCATTGTTGAGACCCAACATCCTTTGTCATCGATGTTGATTGAGGTGGTCGTTCTCAATGGAGAATTCAATGTAGATGAGGAAACAATAACTCACTCAGATTTTGACAAAAACATTGTCCCTCAAAGGATGGGACAACCACCTTTCCTTGTTGGTCATACGAGGTTTCGTTTGAAAAATGGAATTTCTTTTATTAACAATTTGTCTTTCACCACAAACTCCAGTCGGAGCAAAACTAAAAACATTCGACTAGGATTGCGAGTCATAGAAGACCAGATTGTGCCCAACAACAACTACCCCACAATCCGACGAGCTGTATCAAATCCTTTCAGAGTTAAGAATCGCCCACTCCAACGTCAGTATACCCACACGCCAACTTATTTAATTTTGCTATATTTCAAAATACTAGTTTTTATCATGCCACTTGCACTTTATATTTCAATTTTATTTATCAAATGTTAATACATTTTTTTTTTAAAAAAAAAGTGTATTAAATATTAAACTGGTTTATATTTTTAAAAATAATAAAATGTTTATGAAATTATAAAAAGTGATTTTTAAAAATCTGTCATACTAAAGTTTTTGTTTATTTAGATTTATTTTAATAACCCGTTAGTTTTTTTTTTTTTTAGTACAATATATATAGTAGTTTTGCTCTCAAAATTATACTATTTCTTGTATTTTTTAATTTCTATTTTAGAAAATAAATTAAAACTTATTCTAAATTAAACCTTTAGATCTTAAATATATATATATATATATTTTATTTATAACTAATTTTATTGTAAAAGATTTTTTTTCTAAAAAAAATATTAATAACTATATAATTTAAAAGCACACCAAAAATAGGTCCAATACAAAAAAAGTTAGTCCAATTCTTATTATAATTATGTTTTCAAAGCTTAATTTTAGTTTTTTTTTTTTTGGTTGAGTTTCAAAATCTAAATAACTAATCCTTGAATTAAAATAAAGCAATTATAAATAGACTTTGTTTAGGGATGTTTTCAAATATAGCAAAACGGTTGAAAATAATTACAAATATAGCAAAATTATACTTCCTCTATTTCAATCTATTGCGATTTATCATATATAAAAATAAAAAAAATTTGTTATATTTAAAAATATTTTTAATAGTTTTGTCATTTAAAACAATTTATCCTTTGTTTATATTTTTAGTTAGTTATATAGTTATAAATTTCTTAACATCGAAATTATATATAAAAAATAAGACCTCTTTATTATTATTGATTTGATGGAAAAAAATTATTCAGATAAAAAAGTACAAAAAAAATCTTAGAGAAATAATAATAAAAAATTATTATTATTATACAAATTGTTAAAGGGTTTTTTTAATTTTAAATTAAAATTTTTTTTCGTTGTCTTCTCTTTGTTCACATTCCTCACTCTCATCACGATTGCCTTCAAATCATGATTGTATTCAAATTATTAACTATTAGTTTGGCAAAAAGAAATCTCATTCAAAGTAAAGAAAAAACTTTTTTAAAAACTACTATTTTTTTAGTTATTTTAAATTTAACCTAAAAAATATTTATATTAAAAATTCATATTCTAATGATTTTTAACCACGCACATTGCACATGTTCTCTAACTAGTAAGACTAAATACGCACTTTTGGCCTTGAGGGTTAAATGTCTATTAATTTCTTTAAAAGAATTAACAAAATTATAATTAAATAAGTTTTACTATTACTTGTATCACTATTTTAATAACAATTTTAAAATTTCACTTTATAATTATTTTAAATTAATTAACAAACATTAATGCCAAAATTTTAAAAGGGAATAAATTTAGTAAAAAATCAAGATTAAAAGTGTAAAATCTTGAAATCTAAGGACTAAATTGAAAAAAAAATTCAAAACTTAAGGACTATAAGTATAATATTTTGAAACCTAGGGACCCACATAAACAATTAGGACAAAAAAAAAAGTGTTTTTCCCTTAAAGAAAAGTTTTTCAAGTAACAAACAATTGAAAAACCCTAAACTCAGCTTAAAAAATTGGGTGCAGACAAATATATTTAATTTTTATATTTAATATTCTAATTTAATTTCGTTTGGAATATCAATAGGGAACATGAAATACTATCCGCCAAAGGGAGAAGATGAAGTATGGCGATTGGAAGGAATTCGTCTGAATGGTGAATACCACAAGCGCTTATCTTCTAAAGGTATCCTAAATGTGGATAACTTTGTAAAGGCTTATCAAAGGGATGAACATAATCTAAGAAAGGTATGGTCAAGAAGGAAAAAAAGAGTATTTATATATATTCATAATCATTTTTAGCTTTAATTATTTTGTATTAAACAATATGTATATAATTGATTATTTTGGTTGCATGGGCAGGTCCTAGGCAACAGACTGTCCAACAAGAAATGGGAAGCAATGGTGAATCATGCTTTAGAATATGTTCCTCCAATCATGATCCCCACTTTTGATTCAACCAACTTTGGGGTTTCTTCCTCTCTCTATCATCATCTCTACATGCTTATTAAGATTAACAGCACGTTTTAA ATGGTGCAACCATTTGAACCTGTTCAACAGGATGATGAACAACAACAGAACCAACCCAACAGAATCTGCCACTGTTTAACATCTGGGTTGGGAATTGGAGCTGAGGTTTTGTGTGATGAATCATTGGCTTATTTTGAAAAACAATTTCGCCTGCTGGTGCGTGAGGAGGTGGAGACGCAATTGCAAGCTCACTTTAACCTCTCCCACCAATCATATTCTAGTTCAAGTAGAAGTATGGAAGAAGTTGGTGTTATGGGGATGGTGAATTTAAGGTTACGTTTCATGAACAACATTCCATCCATCATATTCACCAAAGACAAGATCAAAGCCGAGAACCGGGAGGCAGTGGAAGTTGGATTATTTGATGCAACAAATAATAGCATTGTTGAGACCCAACATCCTTTGTCATCGATGTTGATTGAGGTGGTCGTTCTCAATGGAGAATTCAATGTAGATGAGGAAACAATAACTCACTCAGATTTTGACAAAAACATTGTCCCTCAAAGGATGGGACAACCACCTTTCCTTGTTGGTCATACGAGGTTTCGTTTGAAAAATGGAATTTCTTTTATTAACAATTTGTCTTTCACCACAAACTCCAGTCGGAGCAAAACTAAAAACATTCGACTAGGATTGCGAGTCATAGAAGACCAGATTGTGCCCAACAACAACTACCCCACAATCCGACGAGCTGTATCAAATCCTTTCAGAGTTAAGAATCGCCCACTCCAACGGAACATGAAATACTATCCGCCAAAGGGAGAAGATGAAGTATGGCGATTGGAAGGAATTCGTCTGAATGGTGAATACCACAAGCGCTTATCTTCTAAAGGTATCCTAAATGTGGATAACTTTGTAAAGGCTTATCAAAGGGATGAACATAATCTAAGAAAGGTCCTAGGCAACAGACTGTCCAACAAGAAATGGGAAGCAATGGTGAATCATGCTTTAGAATATGTTCCTCCAATCATGATCCCCACTTTTGATTCAACCAACTTTGGGGTTTCTTCCTCTCTCTATCATCATCTCTACATGCTTATTAAGATTAACAGCACGTTTTAA ATGGTGCAACCATTTGAACCTGTTCAACAGGATGATGAACAACAACAGAACCAACCCAACAGAATCTGCCACTGTTTAACATCTGGGTTGGGAATTGGAGCTGAGGTTTTGTGTGATGAATCATTGGCTTATTTTGAAAAACAATTTCGCCTGCTGGTGCGTGAGGAGGTGGAGACGCAATTGCAAGCTCACTTTAACCTCTCCCACCAATCATATTCTAGTTCAAGTAGAAGTATGGAAGAAGTTGGTGTTATGGGGATGGTGAATTTAAGGTTACGTTTCATGAACAACATTCCATCCATCATATTCACCAAAGACAAGATCAAAGCCGAGAACCGGGAGGCAGTGGAAGTTGGATTATTTGATGCAACAAATAATAGCATTGTTGAGACCCAACATCCTTTGTCATCGATGTTGATTGAGGTGGTCGTTCTCAATGGAGAATTCAATGTAGATGAGGAAACAATAACTCACTCAGATTTTGACAAAAACATTGTCCCTCAAAGGATGGGACAACCACCTTTCCTTGTTGGTCATACGAGGTTTCGTTTGAAAAATGGAATTTCTTTTATTAACAATTTGTCTTTCACCACAAACTCCAGTCGGAGCAAAACTAAAAACATTCGACTAGGATTGCGAGTCATAGAAGACCAGATTGTGCCCAACAACAACTACCCCACAATCCGACGAGCTGTATCAAATCCTTTCAGAGTTAAGAATCGCCCACTCCAACGGAACATGAAATACTATCCGCCAAAGGGAGAAGATGAAGTATGGCGATTGGAAGGAATTCGTCTGAATGGTGAATACCACAAGCGCTTATCTTCTAAAGGTATCCTAAATGTGGATAACTTTGTAAAGGCTTATCAAAGGGATGAACATAATCTAAGAAAGGTCCTAGGCAACAGACTGTCCAACAAGAAATGGGAAGCAATGGTGAATCATGCTTTAGAATATGTTCCTCCAATCATGATCCCCACTTTTGATTCAACCAACTTTGGGGTTTCTTCCTCTCTCTATCATCATCTCTACATGCTTATTAAGATTAACAGCACGTTTTAA MVQPFEPVQQDDEQQQNQPNRICHCLTSGLGIGAEVLCDESLAYFEKQFRLLVREEVETQLQAHFNLSHQSYSSSSRSMEEVGVMGMVNLRLRFMNNIPSIIFTKDKIKAENREAVEVGLFDATNNSIVETQHPLSSMLIEVVVLNGEFNVDEETITHSDFDKNIVPQRMGQPPFLVGHTRFRLKNGISFINNLSFTTNSSRSKTKNIRLGLRVIEDQIVPNNNYPTIRRAVSNPFRVKNRPLQRNMKYYPPKGEDEVWRLEGIRLNGEYHKRLSSKGILNVDNFVKAYQRDEHNLRKVLGNRLSNKKWEAMVNHALEYVPPIMIPTFDSTNFGVSSSLYHHLYMLIKINSTF
BLAST of Cla001780 vs. Swiss-Prot
Match: CB60C_ARATH (Calmodulin-binding protein 60 C OS=Arabidopsis thaliana GN=CBP60C PE=2 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.3e-40 Identity = 110/313 (35.14%), Postives = 166/313 (53.04%), Query Frame = 1
BLAST of Cla001780 vs. Swiss-Prot
Match: CB60E_ARATH (Calmodulin-binding protein 60 E OS=Arabidopsis thaliana GN=CBP60E PE=2 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.4e-38 Identity = 103/303 (33.99%), Postives = 155/303 (51.16%), Query Frame = 1
BLAST of Cla001780 vs. Swiss-Prot
Match: CB60D_ARATH (Calmodulin-binding protein 60 D OS=Arabidopsis thaliana GN=CBP60D PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.4e-37 Identity = 112/343 (32.65%), Postives = 176/343 (51.31%), Query Frame = 1
BLAST of Cla001780 vs. Swiss-Prot
Match: CB60B_ARATH (Calmodulin-binding protein 60 B OS=Arabidopsis thaliana GN=CBP60B PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 4.5e-37 Identity = 109/341 (31.96%), Postives = 172/341 (50.44%), Query Frame = 1
BLAST of Cla001780 vs. Swiss-Prot
Match: CB60F_ARATH (Calmodulin-binding protein 60 F OS=Arabidopsis thaliana GN=CBP60F PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.2e-36 Identity = 98/302 (32.45%), Postives = 157/302 (51.99%), Query Frame = 1
BLAST of Cla001780 vs. TrEMBL
Match: A5B4G6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019567 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44 Identity = 115/289 (39.79%), Postives = 168/289 (58.13%), Query Frame = 1
BLAST of Cla001780 vs. TrEMBL
Match: F6I4R4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01470 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44 Identity = 115/289 (39.79%), Postives = 168/289 (58.13%), Query Frame = 1
BLAST of Cla001780 vs. TrEMBL
Match: M0WHJ6_HORVD (Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.5e-42 Identity = 114/324 (35.19%), Postives = 183/324 (56.48%), Query Frame = 1
BLAST of Cla001780 vs. TrEMBL
Match: M0WHJ9_HORVD (Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.5e-42 Identity = 114/324 (35.19%), Postives = 183/324 (56.48%), Query Frame = 1
BLAST of Cla001780 vs. TrEMBL
Match: M8CVM9_AEGTA (Uncharacterized protein OS=Aegilops tauschii GN=F775_03074 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41 Identity = 112/325 (34.46%), Postives = 181/325 (55.69%), Query Frame = 1
BLAST of Cla001780 vs. NCBI nr
Match: gi|659099363|ref|XP_008450562.1| (PREDICTED: uncharacterized protein LOC103492122 isoform X2 [Cucumis melo]) HSP 1 Score: 337.8 bits (865), Expect = 2.3e-89 Identity = 186/319 (58.31%), Postives = 225/319 (70.53%), Query Frame = 1
BLAST of Cla001780 vs. NCBI nr
Match: gi|659099361|ref|XP_008450560.1| (PREDICTED: uncharacterized protein LOC103492122 isoform X1 [Cucumis melo]) HSP 1 Score: 337.8 bits (865), Expect = 2.3e-89 Identity = 186/319 (58.31%), Postives = 225/319 (70.53%), Query Frame = 1
BLAST of Cla001780 vs. NCBI nr
Match: gi|659099365|ref|XP_008450563.1| (PREDICTED: uncharacterized protein LOC103492122 isoform X3 [Cucumis melo]) HSP 1 Score: 332.8 bits (852), Expect = 7.3e-88 Identity = 186/319 (58.31%), Postives = 224/319 (70.22%), Query Frame = 1
BLAST of Cla001780 vs. NCBI nr
Match: gi|659099355|ref|XP_008450557.1| (PREDICTED: uncharacterized protein LOC103492121 isoform X1 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 2.8e-87 Identity = 187/338 (55.33%), Postives = 232/338 (68.64%), Query Frame = 1
BLAST of Cla001780 vs. NCBI nr
Match: gi|659099357|ref|XP_008450558.1| (PREDICTED: uncharacterized protein LOC103492121 isoform X2 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 2.8e-87 Identity = 187/338 (55.33%), Postives = 232/338 (68.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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