Cla001588.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAAGAAGAAAGGTTCGACGACGACGGTATGCCCGCAGTTGACAGCGGCGGGTTCGAAGGTGGTGGTGGTTGTGGTTGTGTGTGCCGTGGTGTTGACATTGGCCATATTACTATTTCATTCTGATGAGTTGAAGCTAATTCAATCCTCCAACTTCACTTACCAATTCAGAAACAATGACTTCGGAGATAGCAATGGCTTCCAACCACCTCCTAAGATCGCATTTTTATTCCTCACTCGTAAAAGACTTCCTCTTGATTTTGTTTGGGCCAACTTCTTCAAGGTTTTCCCTGCATTTCCCATTCTTATTGCCTTGTTTCTATTTTGAATGGACAATGATTAAGTGCAACCTACGCTGTTCCTAATCCCATTTTGCCCCTTTCTTTTGCATTTCGAAATCTCTCCCCAATGTGCCGAATGGATAATTATTCGTTATTGTTTGATGAAATGTACAGAATGGAGACCAAGCCAAATTTTCTATTTACATTCACTCAAAGCCAGGCTTTGTGTTTGACAAATCAACCACAAAGTCTTGTTTCTTTTATAACAGACAATTGAACAACAGTATTCAGGTATTTCTCCATGATTTTCCTTTTTGTGTTTCTCAATTTTCTTGGCTCAATCTTGTGGCTATCAAATGTTTAGGTACTATGGGGAGAATCAAGCATGATCGAAGCAGAGCGCCTGCTATTTGGTGCAGCTCTTGATGATCCAGCAAACCAAAGATTCGTCCTTCTTTCCGATAGGTTCGTTTCGATCCTCAAAATTGTTGAATATTAGTCCTACATTAATCTCTAACTTCTTTTCCACTTTTGCAGCTGCATACCTCTCCATAACTTCAGCAGTACTTACAGTTATCTGATGTCTTCCCCAAAAAGCTTTGTCGACAGGTAACGTATTCGAAATGTCGGTAATGAAAGTCGTTAATATCGTCGTAAATCATTGAAATGATGTTGATTGTAAGTAGGGTGTGTTGTGTGTAGTGTAGTTTTTTGAATGTTAACGAAGGTCGATATAATCCCGAGATGTTGCCCATAATATCGCAGGAAAAATGGCGAAAGGGTTCTCAGGTTTAGCCTCTTTGTCTACTTACTTACTTACTTTATAAAATAACATACAACTGAATTTGTTGATGAATTTTTTGCAATTTGTTTTTCAGTGGATTACATTGGTGAGGAAACATGCTGAAGTTGTAGTGAATGATGCCATAATCTTCCCTGTCTTTAAGAAACTTTGTAAGGTGTGGAATGAAAGTTTCAACTTCAAGTAGTTCAATTCAGCAAATATTTTTGTAATATCATTATCCCATGCCCATCATCACACTTTTTCACCTTCGCAGCGATGGCCGCCGTCCACCGGAACGAAAATAACTGTAAGTGCTTTTTTTGGCTGTTTTGAGTAAATTGTAATTTGCTTTTGTTTAGAAACAGGAGTTTGACAAAATTGTTATTCAAAAGGAGAACTATCATCCCAACTGCATACCAGATGAGCATTATGTGCACACTTTACTTTCAGTGAGTTCCTTCCTTTTTCTTTTTCCCTTCAAAATTCAACTTTAATCATTTCTCGTGCTTTAACAATCACTTTTAGTCTCCTAAACTCTCATACAAGTAACAATTTATCACTTAACTTCGCTTTGTAGTGGTTTGATCCTACTCTTTAAAATTTGTATCGATTCAGTCTTTTATGTAGAAATTAGTTTTCAGATTTAATGAGATTTCTTGCACAAATAAACCCATAAACTAAATTAGTTTTCAAATTTGTTACCAACCAAATTTCAAGACTAAATTATTACTTTAAAAAAAAATTTAGAGACAAAAATGTATTTTACCCTACAACATTTTTTCGAGCCGTTACCGATTAGGATCTTCCATTTGAGATGTTAAGCAAAATTTAATTCTTATTAACTGCCAATCTTATTTTGAGGTCATTGTTGTTTCAATGTTCATATTCGTTAAAAACTATTTGTGTTGGTGTCATATAAGATAAGAGGCCTCGAGAACGAACTCGAACGGCGAACGTTGACGTACTCGACGTGGAACAGTTCTATCCCAAAAGGGGACAAAAGATCTTGGCATCCAGTTACTTTCCATCATCCAGATGCAACTCCTTTGAGAATGAAAGAAATAAAGGTCAGTGTGGAGTGTGCAAGTTTGATAAAAATACCTTAAACTGATTTGGTTGTTTGCTCTTATTATCTTTCATCTACTAGGAAATCAATCACATCGACTTTGAAACCGAACACCGAACAGAGTGGTGTCGCGTTAACTCGACGTATACGTCGTGCTTCTTGTTTGCAAGAAAGTTCACTCCCGGGGCGGGGTTGCGAATCTTGAAAAATGATTGA ATGACAAAGAAGAAAGGTTCGACGACGACGGTATGCCCGCAGTTGACAGCGGCGGGTTCGAAGGTGGTGGTGGTTGTGGTTGTGTGTGCCGTGGTGTTGACATTGGCCATATTACTATTTCATTCTGATGAGTTGAAGCTAATTCAATCCTCCAACTTCACTTACCAATTCAGAAACAATGACTTCGGAGATAGCAATGGCTTCCAACCACCTCCTAAGATCGCATTTTTATTCCTCACTCGTAAAAGACTTCCTCTTGATTTTGTTTGGGCCAACTTCTTCAAGAATGGAGACCAAGCCAAATTTTCTATTTACATTCACTCAAAGCCAGGCTTTGTGTTTGACAAATCAACCACAAAGTCTTGTTTCTTTTATAACAGACAATTGAACAACAGTATTCAGGTACTATGGGGAGAATCAAGCATGATCGAAGCAGAGCGCCTGCTATTTGGTGCAGCTCTTGATGATCCAGCAAACCAAAGATTCGTCCTTCTTTCCGATAGCTGCATACCTCTCCATAACTTCAGCAGTACTTACAGTTATCTGATGTCTTCCCCAAAAAGCTTTGTCGACAGTTTTTTGAATGTTAACGAAGGTCGATATAATCCCGAGATGTTGCCCATAATATCGCAGGAAAAATGGCGAAAGGGTTCTCAGTGGATTACATTGGTGAGGAAACATGCTGAAGTTGTAGTGAATGATGCCATAATCTTCCCTGTCTTTAAGAAACTTTGTAAGGAGAACTATCATCCCAACTGCATACCAGATGAGCATTATGTGCACACTTTACTTTCAATAAGAGGCCTCGAGAACGAACTCGAACGGCGAACGTTGACGTACTCGACGTGGAACAGTTCTATCCCAAAAGGGGACAAAAGATCTTGGCATCCAGTTACTTTCCATCATCCAGATGCAACTCCTTTGAGAATGAAAGAAATAAAGGAAATCAATCACATCGACTTTGAAACCGAACACCGAACAGAGTGGTGTCGCGTTAACTCGACGTATACGTCGTGCTTCTTGTTTGCAAGAAAGTTCACTCCCGGGGCGGGGTTGCGAATCTTGAAAAATGATTGA ATGACAAAGAAGAAAGGTTCGACGACGACGGTATGCCCGCAGTTGACAGCGGCGGGTTCGAAGGTGGTGGTGGTTGTGGTTGTGTGTGCCGTGGTGTTGACATTGGCCATATTACTATTTCATTCTGATGAGTTGAAGCTAATTCAATCCTCCAACTTCACTTACCAATTCAGAAACAATGACTTCGGAGATAGCAATGGCTTCCAACCACCTCCTAAGATCGCATTTTTATTCCTCACTCGTAAAAGACTTCCTCTTGATTTTGTTTGGGCCAACTTCTTCAAGAATGGAGACCAAGCCAAATTTTCTATTTACATTCACTCAAAGCCAGGCTTTGTGTTTGACAAATCAACCACAAAGTCTTGTTTCTTTTATAACAGACAATTGAACAACAGTATTCAGGTACTATGGGGAGAATCAAGCATGATCGAAGCAGAGCGCCTGCTATTTGGTGCAGCTCTTGATGATCCAGCAAACCAAAGATTCGTCCTTCTTTCCGATAGCTGCATACCTCTCCATAACTTCAGCAGTACTTACAGTTATCTGATGTCTTCCCCAAAAAGCTTTGTCGACAGTTTTTTGAATGTTAACGAAGGTCGATATAATCCCGAGATGTTGCCCATAATATCGCAGGAAAAATGGCGAAAGGGTTCTCAGTGGATTACATTGGTGAGGAAACATGCTGAAGTTGTAGTGAATGATGCCATAATCTTCCCTGTCTTTAAGAAACTTTGTAAGGAGAACTATCATCCCAACTGCATACCAGATGAGCATTATGTGCACACTTTACTTTCAATAAGAGGCCTCGAGAACGAACTCGAACGGCGAACGTTGACGTACTCGACGTGGAACAGTTCTATCCCAAAAGGGGACAAAAGATCTTGGCATCCAGTTACTTTCCATCATCCAGATGCAACTCCTTTGAGAATGAAAGAAATAAAGGAAATCAATCACATCGACTTTGAAACCGAACACCGAACAGAGTGGTGTCGCGTTAACTCGACGTATACGTCGTGCTTCTTGTTTGCAAGAAAGTTCACTCCCGGGGCGGGGTTGCGAATCTTGAAAAATGATTGA MTKKKGSTTTVCPQLTAAGSKVVVVVVVCAVVLTLAILLFHSDELKLIQSSNFTYQFRNNDFGDSNGFQPPPKIAFLFLTRKRLPLDFVWANFFKNGDQAKFSIYIHSKPGFVFDKSTTKSCFFYNRQLNNSIQVLWGESSMIEAERLLFGAALDDPANQRFVLLSDSCIPLHNFSSTYSYLMSSPKSFVDSFLNVNEGRYNPEMLPIISQEKWRKGSQWITLVRKHAEVVVNDAIIFPVFKKLCKENYHPNCIPDEHYVHTLLSIRGLENELERRTLTYSTWNSSIPKGDKRSWHPVTFHHPDATPLRMKEIKEINHIDFETEHRTEWCRVNSTYTSCFLFARKFTPGAGLRILKND
BLAST of Cla001588 vs. TrEMBL
Match: A0A0A0LQZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416130 PE=4 SV=1) HSP 1 Score: 601.3 bits (1549), Expect = 7.8e-169 Identity = 291/363 (80.17%), Postives = 318/363 (87.60%), Query Frame = 1
BLAST of Cla001588 vs. TrEMBL
Match: B9HZ98_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01410g PE=4 SV=2) HSP 1 Score: 427.2 bits (1097), Expect = 2.0e-116 Identity = 204/342 (59.65%), Postives = 254/342 (74.27%), Query Frame = 1
BLAST of Cla001588 vs. TrEMBL
Match: A0A061DKI0_THECC (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_002123 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 5.0e-115 Identity = 219/372 (58.87%), Postives = 266/372 (71.51%), Query Frame = 1
BLAST of Cla001588 vs. TrEMBL
Match: M5WQ58_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018994mg PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 6.5e-115 Identity = 206/347 (59.37%), Postives = 251/347 (72.33%), Query Frame = 1
BLAST of Cla001588 vs. TrEMBL
Match: E0CVP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00980 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 1.1e-114 Identity = 207/352 (58.81%), Postives = 262/352 (74.43%), Query Frame = 1
BLAST of Cla001588 vs. NCBI nr
Match: gi|659111924|ref|XP_008455976.1| (PREDICTED: uncharacterized protein LOC103496040 [Cucumis melo]) HSP 1 Score: 605.9 bits (1561), Expect = 4.5e-170 Identity = 290/349 (83.09%), Postives = 314/349 (89.97%), Query Frame = 1
BLAST of Cla001588 vs. NCBI nr
Match: gi|700208103|gb|KGN63222.1| (hypothetical protein Csa_2G416130 [Cucumis sativus]) HSP 1 Score: 601.3 bits (1549), Expect = 1.1e-168 Identity = 291/363 (80.17%), Postives = 318/363 (87.60%), Query Frame = 1
BLAST of Cla001588 vs. NCBI nr
Match: gi|778674437|ref|XP_011650213.1| (PREDICTED: uncharacterized protein LOC101210480 [Cucumis sativus]) HSP 1 Score: 599.0 bits (1543), Expect = 5.5e-168 Identity = 291/369 (78.86%), Postives = 318/369 (86.18%), Query Frame = 1
BLAST of Cla001588 vs. NCBI nr
Match: gi|743917200|ref|XP_011002584.1| (PREDICTED: uncharacterized protein LOC105109542 isoform X1 [Populus euphratica]) HSP 1 Score: 427.9 bits (1099), Expect = 1.7e-116 Identity = 206/342 (60.23%), Postives = 253/342 (73.98%), Query Frame = 1
BLAST of Cla001588 vs. NCBI nr
Match: gi|566193100|ref|XP_002317140.2| (hypothetical protein POPTR_0011s01410g [Populus trichocarpa]) HSP 1 Score: 427.2 bits (1097), Expect = 2.9e-116 Identity = 204/342 (59.65%), Postives = 254/342 (74.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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