Cla001524.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAGAAATCAAAGGGGTCTAGGAAGGGGAAGAAAGCATGGAGAGCAAACATAAGCACTGCTGAAATTGAGGATTTCTTCGAGAAGTCCACAAAGGATGCTCTCTCCGGCGGTTCTCTTTCCGCCGTTCCCAGCGATTCTCTTTTCGTCGTCGATAAGTCTCGAGGTATTGCTGCTTCTATTTTTCTTTCTATTTCCCCCTCCATAACCATGGGACACTTCGCCGGTTTTTGTTCTTCTTCTACCTCTCTTGGGTTCTGTTTTCTTAGTTGATTTTGATGTTTTCTTTGCATTGTTTCTGTTGGGTTTTGAGGATGTTAACTAAAGTATCCACAAAAAGTCACTAGAGGTCTCTGAAATTTTGTTTGACGCTAAACGAATCAAATTCCAGCTGCAAGCCTCCTAGCTCATCCTATATTCACCCATATGTTATAAATGAATACTTATAATTGAGAATTTTGAATAGTTTCTCTTGTATACGAGAACTTTGATTCCCAACTGAAATTAAGCCAGATATCCGTGCGTAAACAATTACATTATTTTAGAGATGTTAAATTCTGTCTCGATATGCACTTGGGCTTTGAAAGAAGAATCTATTTCCTTTCCACTTAATAGGAGATGAAACATGTTAGTCTTGGACCCTTTTTGTATACAATTTCTGATGATTGGATGGTATCCTCAATGAGATTTTATGATAATCGTGGGCAGAGGTTAGAGATTTGTTCGTGTGCTTTACCTTCTAATGAATTTGTTTGCTTTGACTTGGGAACTCGAGCGTAGATTAAACGTATATTTGTTTCCTTGAGAGTATAAGCTGATTTCCTTAAACAGAACATTGAATTTTTATAGTCGTATCGTATTGTTGTCATTGTTTGCACTAATTATTATTTCTTTGTTTTCCTTTATAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAGCGGGAAAAAGTCCTTTACTGTGATAGCATGTTAACGAAGAACCCGTTTGTCCAAGCTGTACCTTCTTCAGTAAATAAGAAATCCAAGAAAAAACCGGAAGAGGCTTCCTCAGTTAAAGAAATCTCTCAAGATGGTCCCAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTTTTTTTTTTCTTTTTCTCTCATTACTCTTTTGACATGTATCTCACTTTCGTTCTTAACAACCATTTTTAGTGAAAAAAAAATGAAATAATCAAACATTGCACTACTTGTTTTTGGTGCACTGCAGGTGAGGTTAGAAGCAAAAAAATCAGTAAGGTATGCTCTTTTACCTGGTTAATTAATAATGAGTCTTATATTTTATTGTATATTGTTTATGTCATAAGTTAGAGGTCATTGGTCTCAAATATAGTAATATCAATTTATGAAAATATTCAACTCATGTCCTTATGTGAAGAGGGGGGGAAAAAAAGAAAAGAGGATGTTGGAAAAGAAGAATTATAAGAAAGAAAGGAGAAAGAAAGTATAGATTTTGTTGCAGGAGTGTAACAAAGTAATTGTTGATGCAATCTTGGACAGAAATCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCTGGATGTTCGTTCAATCCATCACATGAGAGTCATCAGGTAAGATGTAACAATTCCAAGCATTGTTTCTTGAAGAAGATAAATAATGTTGTTGGGTGACATTTTCATAATAGATCGTTAAAAGTGTGCTTTTCCCCTTCAAACTCTTTATCATACCTGTTCTTTTACTTAATTTTCCCATTTCATGACTCAGGATGTACTTGCCCAAGCTGTTGCACAAGAAATGCAGAAAGTATATCGTAATGAACTGGGGCCTGCACCAGTTCCATTAACAGTCCCAGGAGAAGTTATTTGTGAAGAAGATGTGAGTAAATTGATCCGTAAACTTGAATTTTATTGGGATACTTATCCCAGTGCATAAAATCTGGTTCTTCCTTTTAGTTTCTTTTCTTGATTTGATAGATTATCTTCAATTCCTGTTTTGCAGATGTTGTTTTTGGATGCTGATAATAACACTGATGATGAAGCCAATTTGGACGAAATGGGTCAGGATGAAGATAATGAATTAGAAAAAAGGTTTCGTTTATGGGATCTAAACTATTTTAAAGATTGCAGATTTTTCCAAGTAGTTTGGATCAATTTTTTTGGCTCTCTTATGCATAGTTTCTCTATATTTGAGAGTGCACTATTGATTTACTGTGTGAATCTATCAGAGCTTAAAAGCTTATGTTCTTCATTATTATTGGGATTGGGCTTGAGCAGGTCTTGCTTACATATGCGTTTGGATTGTATGTCCTTGATGGTTTATCTCTCTAACTTGCGTGCTTTTGGGAGAGGGAAAATAAAATGTTTTTAGAATTCTATTCACCGACATTTTAGTATTTTAAAGAATAGGAAGGTTACTGGAGACGTTGGGATTGGGTAGCGATGAGATCATTGTGAATCTTGGTCATTTTCTTTGCAAACAGATCTTATTCTTTTGGTAACTAATAGTTTGAGAGTTTTGTTTTCTTTTGTTTACCTTTTATTCTAATTTTAATTTTATTCCCCGGGCTTTAGGTTGGGTTTGGACCTCTGGACTTTCTATGTTATTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTAGTTTTCTTTAAACTTAATTTTAATGTTTTTTGCTGTCAATAAGAATGGTTCTTAAATGTATGTTTTGTGATGCTGAATTTAGAGTTGGTATTATTTGAATAAATTAGGCTTGTTATTTAGGCCTTTGAAGATGAGAAGGGTGACTCGAGTGGAGTTGAATAAGAGAGCTAGGCATAAAGAAAAGGTCAGAAAGGAAGCCGAAGCAAAGAAGTTGGAAGGAATTTCTAAAGAGATTGACAGGTAAAGTTGTAACTTTGTTCTTCCATCGTTATGAAACATCCACAAGTTGAAAGGTGTTATAAAAAAAGAGAGACAAATGTTCTATGTAACTGAGCTTTTGCTCTTGTGGATTTAGCTTGCCGGATATCATTCACGAAATAGCCAAAGAGGACGAGGAGAGAGAAAATAGACGTATCCGGCGAACAATAGCCAAACAGGAGAGATTAAAGTCATGCCCGCCACGCTTGGGGAAGCACAAGTATGTAGTAATATATTGA ATGGGGAAGAAATCAAAGGGGTCTAGGAAGGGGAAGAAAGCATGGAGAGCAAACATAAGCACTGCTGAAATTGAGGATTTCTTCGAGAAGTCCACAAAGGATGCTCTCTCCGGCGGTTCTCTTTCCGCCGTTCCCAGCGATTCTCTTTTCGTCGTCGATAAGTCTCGAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAGCGGGAAAAAGTCCTTTACTGTGATAGCATGTTAACGAAGAACCCGTTTGTCCAAGCTGTACCTTCTTCAGTAAATAAGAAATCCAAGAAAAAACCGGAAGAGGCTTCCTCAGTTAAAGAAATCTCTCAAGATGGTCCCAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTGAGGTTAGAAGCAAAAAAATCAGTAAGAAATCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCTGGATGTTCGTTCAATCCATCACATGAGAGTCATCAGGATGTACTTGCCCAAGCTGTTGCACAAGAAATGCAGAAAGTATATCGTAATGAACTGGGGCCTGCACCAGTTCCATTAACAGTCCCAGGAGAAGTTATTTGTGAAGAAGATATGTTGTTTTTGGATGCTGATAATAACACTGATGATGAAGCCAATTTGGACGAAATGGGTCAGGATGAAGATAATGAATTAGAAAAAAGGCCTTTGAAGATGAGAAGGGTGACTCGAGTGGAGTTGAATAAGAGAGCTAGGCATAAAGAAAAGGTCAGAAAGGAAGCCGAAGCAAAGAAGTTGGAAGGAATTTCTAAAGAGATTGACAGCTTGCCGGATATCATTCACGAAATAGCCAAAGAGGACGAGGAGAGAGAAAATAGACGTATCCGGCGAACAATAGCCAAACAGGAGAGATTAAAGTCATGCCCGCCACGCTTGGGGAAGCACAAGTATGTAGTAATATATTGA ATGGGGAAGAAATCAAAGGGGTCTAGGAAGGGGAAGAAAGCATGGAGAGCAAACATAAGCACTGCTGAAATTGAGGATTTCTTCGAGAAGTCCACAAAGGATGCTCTCTCCGGCGGTTCTCTTTCCGCCGTTCCCAGCGATTCTCTTTTCGTCGTCGATAAGTCTCGAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAGCGGGAAAAAGTCCTTTACTGTGATAGCATGTTAACGAAGAACCCGTTTGTCCAAGCTGTACCTTCTTCAGTAAATAAGAAATCCAAGAAAAAACCGGAAGAGGCTTCCTCAGTTAAAGAAATCTCTCAAGATGGTCCCAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTGAGGTTAGAAGCAAAAAAATCAGTAAGAAATCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCTGGATGTTCGTTCAATCCATCACATGAGAGTCATCAGGATGTACTTGCCCAAGCTGTTGCACAAGAAATGCAGAAAGTATATCGTAATGAACTGGGGCCTGCACCAGTTCCATTAACAGTCCCAGGAGAAGTTATTTGTGAAGAAGATATGTTGTTTTTGGATGCTGATAATAACACTGATGATGAAGCCAATTTGGACGAAATGGGTCAGGATGAAGATAATGAATTAGAAAAAAGGCCTTTGAAGATGAGAAGGGTGACTCGAGTGGAGTTGAATAAGAGAGCTAGGCATAAAGAAAAGGTCAGAAAGGAAGCCGAAGCAAAGAAGTTGGAAGGAATTTCTAAAGAGATTGACAGCTTGCCGGATATCATTCACGAAATAGCCAAAGAGGACGAGGAGAGAGAAAATAGACGTATCCGGCGAACAATAGCCAAACAGGAGAGATTAAAGTCATGCCCGCCACGCTTGGGGAAGCACAAGTATGTAGTAATATATTGA MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEKKREKVLYCDSMLTKNPFVQAVPSSVNKKSKKKPEEASSVKEISQDGPKVGMLDLWDDKGEVRSKKISKKSKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRNELGPAPVPLTVPGEVICEEDMLFLDADNNTDDEANLDEMGQDEDNELEKRPLKMRRVTRVELNKRARHKEKVRKEAEAKKLEGISKEIDSLPDIIHEIAKEDEERENRRIRRTIAKQERLKSCPPRLGKHKYVVIY
BLAST of Cla001524 vs. Swiss-Prot
Match: GSR2_ARATH (Uncharacterized protein At2g40430 OS=Arabidopsis thaliana GN=At2g40430 PE=1 SV=2) HSP 1 Score: 258.1 bits (658), Expect = 1.3e-67 Identity = 145/286 (50.70%), Postives = 185/286 (64.69%), Query Frame = 1
HSP 2 Score: 106.7 bits (265), Expect = 4.7e-22 Identity = 68/167 (40.72%), Postives = 94/167 (56.29%), Query Frame = 1
BLAST of Cla001524 vs. Swiss-Prot
Match: GSCR2_HUMAN (Glioma tumor suppressor candidate region gene 2 protein OS=Homo sapiens GN=GLTSCR2 PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 5.1e-08 Identity = 62/212 (29.25%), Postives = 89/212 (41.98%), Query Frame = 1
HSP 2 Score: 39.3 bits (90), Expect = 9.3e-02 Identity = 37/152 (24.34%), Postives = 63/152 (41.45%), Query Frame = 1
BLAST of Cla001524 vs. Swiss-Prot
Match: YIY9_SCHPO (Uncharacterized protein C22F8.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22F8.09 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07 Identity = 75/311 (24.12%), Postives = 131/311 (42.12%), Query Frame = 1
BLAST of Cla001524 vs. Swiss-Prot
Match: GSCR2_DROME (Uncharacterized protein CG1785 OS=Drosophila melanogaster GN=CG1785 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.3e-07 Identity = 45/180 (25.00%), Postives = 84/180 (46.67%), Query Frame = 1
BLAST of Cla001524 vs. TrEMBL
Match: A0A0A0KP89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218800 PE=4 SV=1) HSP 1 Score: 568.9 bits (1465), Expect = 3.8e-159 Identity = 286/310 (92.26%), Postives = 299/310 (96.45%), Query Frame = 1
BLAST of Cla001524 vs. TrEMBL
Match: A0A068UZG7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039087001 PE=4 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 1.8e-116 Identity = 222/316 (70.25%), Postives = 255/316 (80.70%), Query Frame = 1
BLAST of Cla001524 vs. TrEMBL
Match: C6T7P0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G196400 PE=2 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 1.1e-115 Identity = 216/315 (68.57%), Postives = 258/315 (81.90%), Query Frame = 1
BLAST of Cla001524 vs. TrEMBL
Match: A0A0B2S5W0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009470 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 2.2e-114 Identity = 214/315 (67.94%), Postives = 257/315 (81.59%), Query Frame = 1
BLAST of Cla001524 vs. TrEMBL
Match: A0A151R1E5_CAJCA (Uncharacterized protein At2g40430 family OS=Cajanus cajan GN=KK1_042532 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.8e-113 Identity = 208/312 (66.67%), Postives = 256/312 (82.05%), Query Frame = 1
BLAST of Cla001524 vs. NCBI nr
Match: gi|659114114|ref|XP_008456910.1| (PREDICTED: uncharacterized protein At2g40430 [Cucumis melo]) HSP 1 Score: 574.7 bits (1480), Expect = 9.8e-161 Identity = 290/310 (93.55%), Postives = 301/310 (97.10%), Query Frame = 1
BLAST of Cla001524 vs. NCBI nr
Match: gi|449457484|ref|XP_004146478.1| (PREDICTED: uncharacterized protein At2g40430 [Cucumis sativus]) HSP 1 Score: 568.9 bits (1465), Expect = 5.4e-159 Identity = 286/310 (92.26%), Postives = 299/310 (96.45%), Query Frame = 1
BLAST of Cla001524 vs. NCBI nr
Match: gi|1009121495|ref|XP_015877487.1| (PREDICTED: uncharacterized protein At2g40430-like [Ziziphus jujuba]) HSP 1 Score: 429.5 bits (1103), Expect = 5.1e-117 Identity = 214/315 (67.94%), Postives = 261/315 (82.86%), Query Frame = 1
BLAST of Cla001524 vs. NCBI nr
Match: gi|661882360|emb|CDP13940.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 427.2 bits (1097), Expect = 2.5e-116 Identity = 222/316 (70.25%), Postives = 255/316 (80.70%), Query Frame = 1
BLAST of Cla001524 vs. NCBI nr
Match: gi|359807222|ref|NP_001241107.1| (uncharacterized protein LOC100797857 [Glycine max]) HSP 1 Score: 424.5 bits (1090), Expect = 1.6e-115 Identity = 216/315 (68.57%), Postives = 258/315 (81.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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