Cla001522.1 (mRNA) Watermelon (97103) v1

NameCla001522
TypemRNA
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr6 : 16616717 .. 16617124 (+)
Sequence length408
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTATGGGAAGTTTCCTTCCCAGCCTACGTCCAAAATGTGCAATGTCAGTGCCATCACCTCTGTGGCATGCATGGAGAGCACCCCGCCGCTTGTAGATGAACTAGCTGCTGAGCCTGTTGAGGATGTGAGTGTTATTGGAATTGAGGAGAATAGGACCAGCTCGCCAAAGAAACGTGGGGTAAGATTCGATCCTCTTTTGAATTTACATTCTTATGTTTCTGTTGTTCCTTTCCCTAGCAGGTTAGATGTTGTTAACAAAGTTGCACAAGAGGATGAGGTGAAATTTATTCAGCCCTCAGGTGACAAGAGCCCTACTACAAAGGTCAAAAAGGTTTGGGTTGAATTCCCCAAGGAGGGAAAAATAAGAGGAAAAGGTCAAGCAGGAGGTAGTCCTTCCAAGTAA

mRNA sequence

ATGCAGTATGGGAAGTTTCCTTCCCAGCCTACGTCCAAAATGTGCAATGTCAGTGCCATCACCTCTGTGGCATGCATGGAGAGCACCCCGCCGCTTGTAGATGAACTAGCTGCTGAGCCTGTTGAGGATGTGAGTGTTATTGGAATTGAGGAGAATAGGACCAGCTCGCCAAAGAAACGTGGGGTAAGATTCGATCCTCTTTTGAATTTACATTCTTATGTTTCTGTTGTTCCTTTCCCTAGCAGGTTAGATGTTGTTAACAAAGTTGCACAAGAGGATGAGGTGAAATTTATTCAGCCCTCAGGTGACAAGAGCCCTACTACAAAGGTCAAAAAGGTTTGGGTTGAATTCCCCAAGGAGGGAAAAATAAGAGGAAAAGGTCAAGCAGGAGGTAGTCCTTCCAAGTAA

Coding sequence (CDS)

ATGCAGTATGGGAAGTTTCCTTCCCAGCCTACGTCCAAAATGTGCAATGTCAGTGCCATCACCTCTGTGGCATGCATGGAGAGCACCCCGCCGCTTGTAGATGAACTAGCTGCTGAGCCTGTTGAGGATGTGAGTGTTATTGGAATTGAGGAGAATAGGACCAGCTCGCCAAAGAAACGTGGGGTAAGATTCGATCCTCTTTTGAATTTACATTCTTATGTTTCTGTTGTTCCTTTCCCTAGCAGGTTAGATGTTGTTAACAAAGTTGCACAAGAGGATGAGGTGAAATTTATTCAGCCCTCAGGTGACAAGAGCCCTACTACAAAGGTCAAAAAGGTTTGGGTTGAATTCCCCAAGGAGGGAAAAATAAGAGGAAAAGGTCAAGCAGGAGGTAGTCCTTCCAAGTAA

Protein sequence

MQYGKFPSQPTSKMCNVSAITSVACMESTPPLVDELAAEPVEDVSVIGIEENRTSSPKKRGVRFDPLLNLHSYVSVVPFPSRLDVVNKVAQEDEVKFIQPSGDKSPTTKVKKVWVEFPKEGKIRGKGQAGGSPSK
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla001522Cla001522gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla001522Cla001522.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla001522.1.cds1Cla001522.1.cds1CDS


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..25
score: