Cla001348.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001348
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr1 : 31248454 .. 31249122 (-)
Sequence length	669

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCTACCCTTTCCATTCCCACCTCCCATCCTCTGTTTTCTACTCTTTTCACTTTCTTCCTTCTCATTCTCCTCTACTTTCCCCCTTTTCTCTGGACTTCCCTCCTCTCTCCCGCCCTCCTCCTCGCCGGATTCCTCTTCCTCTCCCTCCTCCGCCTCGGCGCTACTCAACGCCAAACCATCACCAACCCCCACTCTCAATTTCAATCCAATTTAATTACCCAACAAGGATCACAAGGCTGTAGTAGTTCTGCTTCCATTTCTTCCTCCGCCTCCTACGAGAAATCTTTCGTACAGTGGAACGTCAGGGCACCGTTGGAGGTTATTTACGAAGATTACGAAGAAGAAGAAGAAGACGAAGGCGAAAATCGCGATAAGGAGTTTCCGGAGCCCGGAGTGGCACCACGCATCGAATCAATCGAGAGGTATCCGTCGCTTTCGCTCTACTATCCGGAAACAGATTCCGATTGCTCGTCGGTGGATGAGATGGAGAATGTGTGTTTCATGTGGGATGAGGAGGATGAAGACAGAGATGAACTCATCGAGATTGCTTTGGATAACAAGAAGAAGCCATCCCAATTTTTTGAGTCGGAGCCGGAGGAGGATAATTTGATCGAGATTCATATTTCTCCAACCGCTTTTCCAATGTTTAATAATATTTAA

mRNA sequence

ATGTCTTCTTCTACCCTTTCCATTCCCACCTCCCATCCTCTGTTTTCTACTCTTTTCACTTTCTTCCTTCTCATTCTCCTCTACTTTCCCCCTTTTCTCTGGACTTCCCTCCTCTCTCCCGCCCTCCTCCTCGCCGGATTCCTCTTCCTCTCCCTCCTCCGCCTCGGCGCTACTCAACGCCAAACCATCACCAACCCCCACTCTCAATTTCAATCCAATTTAATTACCCAACAAGGATCACAAGGCTGTAGTAGTTCTGCTTCCATTTCTTCCTCCGCCTCCTACGAGAAATCTTTCGTACAGTGGAACGTCAGGGCACCGTTGGAGGTTATTTACGAAGATTACGAAGAAGAAGAAGAAGACGAAGGCGAAAATCGCGATAAGGAGTTTCCGGAGCCCGGAGTGGCACCACGCATCGAATCAATCGAGAGGTATCCGTCGCTTTCGCTCTACTATCCGGAAACAGATTCCGATTGCTCGTCGGTGGATGAGATGGAGAATGTGTGTTTCATGTGGGATGAGGAGGATGAAGACAGAGATGAACTCATCGAGATTGCTTTGGATAACAAGAAGAAGCCATCCCAATTTTTTGAGTCGGAGCCGGAGGAGGATAATTTGATCGAGATTCATATTTCTCCAACCGCTTTTCCAATGTTTAATAATATTTAA

Coding sequence (CDS)

ATGTCTTCTTCTACCCTTTCCATTCCCACCTCCCATCCTCTGTTTTCTACTCTTTTCACTTTCTTCCTTCTCATTCTCCTCTACTTTCCCCCTTTTCTCTGGACTTCCCTCCTCTCTCCCGCCCTCCTCCTCGCCGGATTCCTCTTCCTCTCCCTCCTCCGCCTCGGCGCTACTCAACGCCAAACCATCACCAACCCCCACTCTCAATTTCAATCCAATTTAATTACCCAACAAGGATCACAAGGCTGTAGTAGTTCTGCTTCCATTTCTTCCTCCGCCTCCTACGAGAAATCTTTCGTACAGTGGAACGTCAGGGCACCGTTGGAGGTTATTTACGAAGATTACGAAGAAGAAGAAGAAGACGAAGGCGAAAATCGCGATAAGGAGTTTCCGGAGCCCGGAGTGGCACCACGCATCGAATCAATCGAGAGGTATCCGTCGCTTTCGCTCTACTATCCGGAAACAGATTCCGATTGCTCGTCGGTGGATGAGATGGAGAATGTGTGTTTCATGTGGGATGAGGAGGATGAAGACAGAGATGAACTCATCGAGATTGCTTTGGATAACAAGAAGAAGCCATCCCAATTTTTTGAGTCGGAGCCGGAGGAGGATAATTTGATCGAGATTCATATTTCTCCAACCGCTTTTCCAATGTTTAATAATATTTAA

Protein sequence

MSSSTLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQRQTITNPHSQFQSNLITQQGSQGCSSSASISSSASYEKSFVQWNVRAPLEVIYEDYEEEEEDEGENRDKEFPEPGVAPRIESIERYPSLSLYYPETDSDCSSVDEMENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPEEDNLIEIHISPTAFPMFNNI

Homology

[Close]

BLAST of Cla001348 vs. TrEMBL
Match: A0A0A0KLD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516950 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.3e-65
Identity = 152/240 (63.33%), Postives = 172/240 (71.67%), Query Frame = 1


Query: 2   SSSTLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQRQ 61
           SSS+LSI  SHPLFS L +FF LILL+FPPFLWTSLLSPAL+LAGFLFLSLLRLGATQRQ
Sbjct: 3   SSSSLSI-FSHPLFSALLSFFTLILLFFPPFLWTSLLSPALVLAGFLFLSLLRLGATQRQ 62

Query: 62  --------TITNPHSQFQSNLITQQGSQGCSSSASISSSASYEKSFVQWNVRAPLEVIYE 121
                   TITNP       +   Q  + C+  + ISS   +E+SFVQWNVRAPLEVIYE
Sbjct: 63  RQRQHQPITITNPQP-----IKFTQPPEHCTGCSPISS--CFEESFVQWNVRAPLEVIYE 122

Query: 122 DYEEEEEDEGENRDKEFPEPGVAP------------RIESIERYPSLSLYYPETDSD--C 181
           DYEEE+E+E E  +KE  E  V              R+ S+ERYPSLSLYYPETDSD   
Sbjct: 123 DYEEEDEEEEEEEEKEEGEVEVDEDKDKDDGTVLHMRLNSMERYPSLSLYYPETDSDSWS 182

Query: 182 SSVDEMENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPEEDNLIEIHISPTAFPMF 220
            + DEMENVCFMWD  DEDRDELIEIALD K+  S+FF+   EE+NLIEI ISPTAFPMF
Sbjct: 183 GAEDEMENVCFMWD--DEDRDELIEIALDKKRVSSEFFQL--EEENLIEIDISPTAFPMF 230

[Close]

BLAST of Cla001348 vs. TrEMBL
Match: I1MEA1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G067400 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-37
Identity = 113/258 (43.80%), Postives = 136/258 (52.71%), Query Frame = 1


Query: 4   STLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQR--- 63
           S LS+ +S PLFS + TF  LILLY P   W  + SP L+L+G L L LLRLGA QR   
Sbjct: 24  SLLSVHSSQPLFSCIVTFCFLILLYLPHLFWKIVFSPVLILSGVLLLLLLRLGAIQRSQN 83

Query: 64  ---------QTITNPHS-----QFQSNLI---------------TQQGSQGCSSSASISS 123
                    + I N  +     + Q N I               T Q  +   S     S
Sbjct: 84  EEKKNSVEPEPIANEENRGNREEKQGNPIEPVETDSLDHVYRWVTSQSQKEIKSQMGFQS 143

Query: 124 SASYEKSFVQWNVRAPLEVIYEDYEEEEEDEGENRDKEFPEPGVAPRIESIERYPSLSLY 183
           S+ +++SFV+WNV+APLEVIYE  EE E+D+ E RD            E I RYPSLS Y
Sbjct: 144 SSRFDESFVEWNVKAPLEVIYEG-EETEQDQNEKRD------------EGILRYPSLSRY 203

Query: 184 YPETDSDCSSVDEM---------ENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPE 221
           YPETDSD SS  E          EN+CF WDE  EDR+ LIEIALD  KK    F    +
Sbjct: 204 YPETDSDSSSESEFPATENWDSPENMCFRWDE--EDREGLIEIALDGCKKRDVGFHF--D 263

[Close]

BLAST of Cla001348 vs. TrEMBL
Match: I1M2C8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G246500 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.3e-36
Identity = 111/258 (43.02%), Postives = 134/258 (51.94%), Query Frame = 1


Query: 4   STLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQR--- 63
           S LS+ +S PLFS + TF  LILLY P   W  + SP L L+G L L LLRLGA QR   
Sbjct: 24  SLLSVHSSQPLFSCIVTFCFLILLYLPHLFWKIVFSPVLFLSGVLLLLLLRLGAIQRSQN 83

Query: 64  ---------QTITNPHS-----QFQSN---------------LITQQGSQGCSSSASISS 123
                    + I N  +     + Q N                IT Q      S     S
Sbjct: 84  EEKKNPVEPEPIANEENRGNREEKQGNPIEPVETDSQDHVYRWITSQSQTTIKSQMGFQS 143

Query: 124 SASYEKSFVQWNVRAPLEVIYEDYEEEEEDEGENRDKEFPEPGVAPRIESIERYPSLSLY 183
           S+ +++SFV+WNV+APLEVIYE  EE E+++ E RD            E I R+PSLS Y
Sbjct: 144 SSRFDESFVEWNVKAPLEVIYEG-EETEQNQNEKRD------------EGILRHPSLSRY 203

Query: 184 YPETDSDCSSV---------DEMENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPE 221
           YPETDSD SS          D  EN+CF WDE  EDR+ LIEIALD  KK    F    +
Sbjct: 204 YPETDSDSSSESGFPATENWDSPENMCFRWDE--EDREGLIEIALDGCKKREVGFHF--D 263

[Close]

BLAST of Cla001348 vs. TrEMBL
Match: A0A0B2PLX8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014352 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.3e-36
Identity = 111/258 (43.02%), Postives = 134/258 (51.94%), Query Frame = 1


Query: 4   STLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQR--- 63
           S LS+ +S PLFS + TF  LILLY P   W  + SP L L+G L L LLRLGA QR   
Sbjct: 24  SLLSVHSSQPLFSCIVTFCFLILLYLPHLFWKIVFSPVLFLSGVLLLLLLRLGAIQRSQN 83

Query: 64  ---------QTITNPHS-----QFQSN---------------LITQQGSQGCSSSASISS 123
                    + I N  +     + Q N                IT Q      S     S
Sbjct: 84  EEKKNPVEPEPIANEENRGNREEKQGNPIEPVETDSQDHVYRWITSQSQTTIKSQMGFQS 143

Query: 124 SASYEKSFVQWNVRAPLEVIYEDYEEEEEDEGENRDKEFPEPGVAPRIESIERYPSLSLY 183
           S+ +++SFV+WNV+APLEVIYE  EE E+++ E RD            E I R+PSLS Y
Sbjct: 144 SSRFDESFVEWNVKAPLEVIYEG-EETEQNQNEKRD------------EGILRHPSLSRY 203

Query: 184 YPETDSDCSSV---------DEMENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPE 221
           YPETDSD SS          D  EN+CF WDE  EDR+ LIEIALD  KK    F    +
Sbjct: 204 YPETDSDSSSESGFPATENWDSPENMCFRWDE--EDREGLIEIALDGCKKREVGFHF--D 263

[Close]

BLAST of Cla001348 vs. TrEMBL
Match: A0A151T7G6_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_017559 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-35
Identity = 106/234 (45.30%), Postives = 126/234 (53.85%), Query Frame = 1


Query: 4   STLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQR--- 63
           S LS+ +SHPLFS + TF +LILLY P      L SP L+L+G L L LLRLGA QR   
Sbjct: 23  SFLSVHSSHPLFSCIVTFSILILLYLPRLFSKILFSPVLILSGLLLLLLLRLGAIQRVEK 82

Query: 64  -----QTITNPHSQFQSNLITQQGSQGCSSSASISSSASYEKSFVQWNVRAPLEVIYEDY 123
                + + N         +  Q      S     SS+ ++ SFV+WNV+APLEVIYE  
Sbjct: 83  QGSIIEAVENDSLDHVYRWVRSQSEVEFKSQTDFHSSSRFDDSFVEWNVKAPLEVIYEG- 142

Query: 124 EEEEEDEGENRDKEFPEPGVAPRIESIERYPSLSLYYPETDSDCSSV---------DEME 183
           EE E D+ E                 I RYPSLS YYPETDSD SS          D  E
Sbjct: 143 EETEHDQNE---------------VGILRYPSLSRYYPETDSDSSSESGFPATENWDSPE 202

Query: 184 NVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPEEDNLIEIHISPTAFPMFN 221
           N+ F WDE  EDR+ LIEIALD  KK    F+   EE+NLIEI ISPT    F+
Sbjct: 203 NMRFRWDE--EDREGLIEIALDGCKKREVGFQF--EEENLIEIDISPTRHREFS 236

[Close]

BLAST of Cla001348 vs. TAIR10
Match: AT4G21500.1 (AT4G21500.1 unknown protein)

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29
Identity = 88/223 (39.46%), Postives = 117/223 (52.47%), Query Frame = 1


Query: 11  SHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQRQTITNPHSQF 70
           SHPLFS   T + LIL+YFP  L    LSP LL++G L LSLLRLG+T R+  T P   +
Sbjct: 12  SHPLFSIFITLYSLILIYFPNDLLRIFLSPVLLISGALLLSLLRLGST-REPNTQPDKSY 71

Query: 71  QSNLITQQGSQGCSSSASISSSASYEKSFVQWNVRAPLEVIYEDYEEEEEDEGENRDKEF 130
           +         +       +   +     FV+WN+RAPLEVI+E YE+EEE+E E      
Sbjct: 72  E---------ESEEPKVFLVRESDLMGGFVEWNLRAPLEVIHEAYEDEEEEEEEE----- 131

Query: 131 PEPGVAPRIESIERYPSLSLYYPETDSDCSSV-------------DEMENVCFMWDEEDE 190
            +P    R   +ER+PSLSL YPE+DS+  S              +  EN+ F W+E++ 
Sbjct: 132 -DP---TRFRKMERFPSLSLCYPESDSESDSASSSEFNFPEIGDWNSPENMGFRWEEDEG 191

Query: 191 --DRDELIEIALD----NKKKPSQF-FESEPEEDNLIEIHISP 214
               + LIEI LD    N+K  S+   +   EED LIEI + P
Sbjct: 192 GIGCEGLIEIKLDHYSHNRKMMSKTEIDFHAEEDGLIEIDLFP 215

[Close]

BLAST of Cla001348 vs. NCBI nr
Match: gi|778720680|ref|XP_011658193.1| (PREDICTED: uncharacterized protein LOC105435960 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 1.9e-65
Identity = 152/240 (63.33%), Postives = 172/240 (71.67%), Query Frame = 1


Query: 2   SSSTLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQRQ 61
           SSS+LSI  SHPLFS L +FF LILL+FPPFLWTSLLSPAL+LAGFLFLSLLRLGATQRQ
Sbjct: 3   SSSSLSI-FSHPLFSALLSFFTLILLFFPPFLWTSLLSPALVLAGFLFLSLLRLGATQRQ 62

Query: 62  --------TITNPHSQFQSNLITQQGSQGCSSSASISSSASYEKSFVQWNVRAPLEVIYE 121
                   TITNP       +   Q  + C+  + ISS   +E+SFVQWNVRAPLEVIYE
Sbjct: 63  RQRQHQPITITNPQP-----IKFTQPPEHCTGCSPISS--CFEESFVQWNVRAPLEVIYE 122

Query: 122 DYEEEEEDEGENRDKEFPEPGVAP------------RIESIERYPSLSLYYPETDSD--C 181
           DYEEE+E+E E  +KE  E  V              R+ S+ERYPSLSLYYPETDSD   
Sbjct: 123 DYEEEDEEEEEEEEKEEGEVEVDEDKDKDDGTVLHMRLNSMERYPSLSLYYPETDSDSWS 182

Query: 182 SSVDEMENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPEEDNLIEIHISPTAFPMF 220
            + DEMENVCFMWD  DEDRDELIEIALD K+  S+FF+   EE+NLIEI ISPTAFPMF
Sbjct: 183 GAEDEMENVCFMWD--DEDRDELIEIALDKKRVSSEFFQL--EEENLIEIDISPTAFPMF 230

[Close]

BLAST of Cla001348 vs. NCBI nr
Match: gi|659080984|ref|XP_008441085.1| (PREDICTED: VID27-like protein, partial [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 7.4e-62
Identity = 148/239 (61.92%), Postives = 168/239 (70.29%), Query Frame = 1


Query: 2   SSSTLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQRQ 61
           SSS+LSI  SHPLFS L +FF LILL+FPPFLWTSLLSP+LLLAGFLFLSLLRLGATQR+
Sbjct: 9   SSSSLSI-FSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQRE 68

Query: 62  ----TITNPHSQFQSNLITQQGSQGCSSSASISSSASYEKSFVQWNVRAPLEVIYEDYEE 121
               TITNP    QS  +TQ       S      S+ +E+SFVQWNVRAPLEVIYE YEE
Sbjct: 69  HQPITITNP----QSIKLTQPPEHWSGSPI----SSCFEESFVQWNVRAPLEVIYEVYEE 128

Query: 122 EEEDEGENRDKEFPEPG--------------VAPRIESIERYPSLSLYYPETDSDCSS-- 181
           EEE+E E  ++E  E                V  R   +ERYPSLSLYYPETDSD SS  
Sbjct: 129 EEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAA 188

Query: 182 -VDEMENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPEEDNLIEIHISPTAFPMF 220
             DEMENVCFMWD+ED D +ELIEIALD K+  S+ F+   EE+NLIEI+ISPTAFP F
Sbjct: 189 AADEMENVCFMWDDEDRD-EELIEIALDKKRVSSECFQL--EEENLIEINISPTAFPTF 235

[Close]

BLAST of Cla001348 vs. NCBI nr
Match: gi|955366234|ref|XP_014622937.1| (PREDICTED: uncharacterized protein LOC106796036 [Glycine max])

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-37
Identity = 113/258 (43.80%), Postives = 136/258 (52.71%), Query Frame = 1


Query: 4   STLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQR--- 63
           S LS+ +S PLFS + TF  LILLY P   W  + SP L+L+G L L LLRLGA QR   
Sbjct: 24  SLLSVHSSQPLFSCIVTFCFLILLYLPHLFWKIVFSPVLILSGVLLLLLLRLGAIQRSQN 83

Query: 64  ---------QTITNPHS-----QFQSNLI---------------TQQGSQGCSSSASISS 123
                    + I N  +     + Q N I               T Q  +   S     S
Sbjct: 84  EEKKNSVEPEPIANEENRGNREEKQGNPIEPVETDSLDHVYRWVTSQSQKEIKSQMGFQS 143

Query: 124 SASYEKSFVQWNVRAPLEVIYEDYEEEEEDEGENRDKEFPEPGVAPRIESIERYPSLSLY 183
           S+ +++SFV+WNV+APLEVIYE  EE E+D+ E RD            E I RYPSLS Y
Sbjct: 144 SSRFDESFVEWNVKAPLEVIYEG-EETEQDQNEKRD------------EGILRYPSLSRY 203

Query: 184 YPETDSDCSSVDEM---------ENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPE 221
           YPETDSD SS  E          EN+CF WDE  EDR+ LIEIALD  KK    F    +
Sbjct: 204 YPETDSDSSSESEFPATENWDSPENMCFRWDE--EDREGLIEIALDGCKKRDVGFHF--D 263

[Close]

BLAST of Cla001348 vs. NCBI nr
Match: gi|734337650|gb|KHN08587.1| (hypothetical protein glysoja_014352 [Glycine soja])

HSP 1 Score: 159.1 bits (401), Expect = 9.1e-36
Identity = 111/258 (43.02%), Postives = 134/258 (51.94%), Query Frame = 1


Query: 4   STLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQR--- 63
           S LS+ +S PLFS + TF  LILLY P   W  + SP L L+G L L LLRLGA QR   
Sbjct: 24  SLLSVHSSQPLFSCIVTFCFLILLYLPHLFWKIVFSPVLFLSGVLLLLLLRLGAIQRSQN 83

Query: 64  ---------QTITNPHS-----QFQSN---------------LITQQGSQGCSSSASISS 123
                    + I N  +     + Q N                IT Q      S     S
Sbjct: 84  EEKKNPVEPEPIANEENRGNREEKQGNPIEPVETDSQDHVYRWITSQSQTTIKSQMGFQS 143

Query: 124 SASYEKSFVQWNVRAPLEVIYEDYEEEEEDEGENRDKEFPEPGVAPRIESIERYPSLSLY 183
           S+ +++SFV+WNV+APLEVIYE  EE E+++ E RD            E I R+PSLS Y
Sbjct: 144 SSRFDESFVEWNVKAPLEVIYEG-EETEQNQNEKRD------------EGILRHPSLSRY 203

Query: 184 YPETDSDCSSV---------DEMENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPE 221
           YPETDSD SS          D  EN+CF WDE  EDR+ LIEIALD  KK    F    +
Sbjct: 204 YPETDSDSSSESGFPATENWDSPENMCFRWDE--EDREGLIEIALDGCKKREVGFHF--D 263

[Close]

BLAST of Cla001348 vs. NCBI nr
Match: gi|951042135|ref|XP_014518097.1| (PREDICTED: uncharacterized protein LOC106775485 [Vigna radiata var. radiata])

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 107/246 (43.50%), Postives = 132/246 (53.66%), Query Frame = 1


Query: 4   STLSIPTSHPLFSTLFTFFLLILLYFPPFLWTSLLSPALLLAGFLFLSLLRLGATQR--- 63
           S LS+ +S PLFS + TF  LILLY P   W  +LSP L+L+G L L LLRLGA QR   
Sbjct: 24  SFLSVHSSQPLFSCILTFCFLILLYLPHLFWKIVLSPVLILSGLLLLLLLRLGAIQRSQN 83

Query: 64  ----------------------QTITNPHSQFQSNL-------ITQQGSQGCSSSASISS 123
                                 +   NP    +++        +T +     SS A + S
Sbjct: 84  EENKVPVEREPIATEENRGNRDERQGNPIEPVEADSLDYVYRWVTSESQIQLSSQAGLRS 143

Query: 124 SASYEKSFVQWNVRAPLEVIYEDYEEEEEDEGENRDKEFPEPGVAPRIESIERYPSLSLY 183
           S+  ++SF++WNV+APLEVIYE  EE E+D+  N              E I RYPSLS Y
Sbjct: 144 SSRLDESFMEWNVKAPLEVIYEG-EETEQDQNGNHG------------EGIFRYPSLSRY 203

Query: 184 YPETDSDCSSVDEM---ENVCFMWDEEDEDRDELIEIALDNKKKPSQFFESEPEEDNLIE 215
           YPETDSD SS       +N CF WDE  EDR+ LIEIALD  KK    F+   EE+NLIE
Sbjct: 204 YPETDSDSSSESGFPGTDNTCFRWDE--EDREGLIEIALDGCKKREVGFQF--EEENLIE 252

The following BLAST results are available for this feature:

BLAST of Cla001348 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLD5_CUCSA	1.3e-65	63.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516950 PE=4 SV=1	[more]
I1MEA1_SOYBN	1.5e-37	43.80	Uncharacterized protein OS=Glycine max GN=GLYMA_15G067400 PE=4 SV=1	[more]
I1M2C8_SOYBN	6.3e-36	43.02	Uncharacterized protein OS=Glycine max GN=GLYMA_13G246500 PE=4 SV=1	[more]
A0A0B2PLX8_GLYSO	6.3e-36	43.02	Uncharacterized protein OS=Glycine soja GN=glysoja_014352 PE=4 SV=1	[more]
A0A151T7G6_CAJCA	1.8e-35	45.30	Uncharacterized protein OS=Cajanus cajan GN=KK1_017559 PE=4 SV=1	[more]

BLAST of Cla001348 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21500.1	3.0e-29	39.46	unknown protein	[more]

BLAST of Cla001348 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778720680\|ref\|XP_011658193.1\|	1.9e-65	63.33	PREDICTED: uncharacterized protein LOC105435960 [Cucumis sativus]	[more]
gi\|659080984\|ref\|XP_008441085.1\|	7.4e-62	61.92	PREDICTED: VID27-like protein, partial [Cucumis melo]	[more]
gi\|955366234\|ref\|XP_014622937.1\|	2.2e-37	43.80	PREDICTED: uncharacterized protein LOC106796036 [Glycine max]	[more]
gi\|734337650\|gb\|KHN08587.1\|	9.1e-36	43.02	hypothetical protein glysoja_014352 [Glycine soja]	[more]
gi\|951042135\|ref\|XP_014518097.1\|	1.2e-35	43.50	PREDICTED: uncharacterized protein LOC106775485 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla001348	Cla001348	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla001348	Cla001348.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla001348.1.cds1	Cla001348.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37746	FAMILY NOT NAMED	coord: 4..219 score: 9.2