Cla001222.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001222
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Riboflavin biosynthesis protein ribD (AHRD V1 ***- B6TRH4_MAIZE); contains Interpro domain(s) IPR004794 Riboflavin biosynthesis protein RibD
Location	Chr6 : 4144448 .. 4147667 (-)
Sequence length	1287

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTCAATTCCGTTTCCTTCGTCTGGTGAGTTTCTTCTTTCCCCTCTGTAACTTTATCTTGAATCTCACATGGAAAGACGCACAATCCGGAAGAAGAATCATGTTTAATTATTTGTCAATATCGATGCAATTTGACTTTGAAGTTGCTCTGTTTCTCGATTCCCTCACATCTCTCCTCTTTTTCGTGTTTTGATCATCTTTAATTATTTTTCAATTCAGAAGTGCTCTTTGTTTGTCGTTCTGCTTGTTTTTCAATCGATCGACGACAAAGTATTTTGATCCCATGGCTCTGTTTTTGCTATCTGTTCTTCTACTTCATTTTCATCTTGCGGCTTGTTCCTTGATTTGTTTCTGGGAAAACAGTGAAAAGAATGCCATTTCGTTACATTTCTCTTTCACTTGAAATTTCCGTATTCCTATTAGTATGTTTAGCTTGAATTTTTTCGAATTTGGTAAGGCATTAGAAATGTTACAGGAATTGGGTTCGATTTGGTTTTAGATAAACTCGGCGCTTTTCGCTTAGTGAATTTATTGATTGTTCTTACTTAATGTTGAAGGAATGCAACTCCAAAATTGACTCCACCTACAACTCTTAATGATGTTCATTCGCCATCAATCTACCACTGCCTTCACAACGACAAACTCGGGCTCTATGATTGCTCTAGATCTAGGGTTTCCAGTTCAGTGAAATGGATGGTTAAATCAGGAAGCTGTAGGGGAGGGCAATCGGTTAGATGTGTTAATATAATTCAAGACATTCATTGTGATGTTGATGATGAGGTTTACATGAGGAGGTCTTTGGAGATTGCAAGGAAGGCAATTGGGCATACAAGCCCTAATCCCATGGTGGGATGTGTGATTGTGAAAAATGGGGAAATTGTTGGTGAAGGCTTTCATCCTAAAGCAGGGCAGCCTCATGCTGAGGTAAACCTTTAATCCTAAATTTCTAATCACATTTTCTCTCCCCATCTTTACTCTTTTCACAGTTGATGTGTTTTGGTTTTACAGTGTTGAAGGACTGCAGTTATAAGCCTTTTGGTAAAGTTTTTTCTTGTTAGTTTCTTGTTTTTTATAAGATGTTTGACAACTAAAAAAAAGTTAACACTTGTTATATTGCACTTTTACCAGATTAACAATATAATTCCTAGACTTTTGTTATGGTTGTAAAGATTTAGCCCTTAAAATTTAATATGTAACAATTTAACAATTTAGTACTTGTACTTAAAGATTTGTAATGATTGAATGATCGAGTCTTTGGTGAAAAGTATTGAAATTTCTTATATGTAGTTTTCTTTTTCTTTTGAGAAACTTACAAGTAGATGGATAAATTAATTAGGGACCAAATGTATTTACAAATAGAAAGATTAAGTTAATACTTCATAAAATTTAAAAATTAAATTGTTACAAATTTAAAAGTAGAGGGACTATATATATATATATATTTGGTGAGGGAGGAGTGGTTCAAGAAATGGGTGTGGGGGATTCAAAACTTTAGCATAGAGACTAAATTGTTATATGTTGAAGTTTAGGGATAAGTTTCTACAGATTTAAAACTACTCAAAAACTACTCCGTCAAAGTTGTTACAATCTAAAGCTTAGAGAATAAATTAAAGAATAAATTGTTACATTAGAGATCAAACTTATTTTTTAACCTAAAAAAAGGTAAGGGAGATTAAAAATCAAAGAAACAAAAGAAAAGTGAGATAGAGGAGAAGAGAAGAGAAGAAACAAAAAGATAAGTAATAGACGGGTGAATAAAAATTAAGAATTACACAAAATCTCCTTAGGTTTTGATTTATTTATTTTCAAAATATGATTATATATGTATAATGTAGTTATCAAATGAAACATTATCCATCTATTTTATGATTAAAAAGTGCTGCTGATTTTCAAACCAAGAGATCAAATGAATAGGTATTTGCTCTGCGAGAAGCTGGGAATTTGGCAGAGAATGCAACGGCATATGTGACTTTAGAACCATGCAATCACTATGGTAGAACTCCACCGTGTACAGAGGCTCTAGTAAAAGCCAAAGTGAGGAGGGTGGTGGTTGGCATGGTGGATCCCAATCCAATTGTTGCTTCCAAAGGCGTTCAACGATTAAGAGAGGCAGGAATTGATGTGACTGTGAGCATAGAAGAAGATTCCTGCAAAAAGCTTAATGAAGCATATATTCATCAAATCTTGACTGGGAAGCCTCTTCTTACCCTAAGGTAATTTCCATTTTCTGATAAAATTGCAAGTGTGTTGGGATTGCTTTTAAAATAAGCAATGTTAGTAAAAGTATTTTAGTAAAGAGTGTTTATTAAAGTTATTTGATTGTTTTTCTAATAAGCATTTTGGCGAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAATCACCACTTAAGAATACGTTCTCAATCATTCAAATGTATTTTTCTATCATTCAAACTCACTTCCAAATATGCTTGAGATATTTTTTTCTTTTTAAAAAAATACTCATATATCACTTCTCGAAAAGTACTTTATGATCATGGAAAACTGCTTTTAACCACGCTGAAACACCGCTAGACATTTGATTTGTCGTAACTTGTAAGTTTCTTTACTAATACAGAGCCACACCTGACTGACCACAGGTACACCCTCTCTTTAAACGGTTGCTTTCTAGATCAGGTTGGGAACGGAGTTGTGGACGCTGGTGGCTACTATTCTCAACTATTACAAGAGTATACTGCTGTTCTAATTTCTCCTCCCTCATCATCTGAGGAGTTCGAAATCCCTGCATCCAAGGAACATGGAGCCAAGCAACCCCTTTGGATCATTCTATCGAGTCCCAACGGTTCGATCACTATTCCTCGCATTACGGATACAACTACGAAAGTAGTAATCTTAACAGACAAAGAAGTGGTGGTAGGCAAGGAAGGGATTGAAACGGTAGTTATGGATGAATTAAATTTGGGCAACATTCTAGATTACTGCCAGAGCCAAGGACTAAACAGTGTCCTGTGGGATGTGAGAGCAAAGTTGGGAATTCACGAACAACTTATGAAAGAGGGTATTGAGCAGAAATATTTGCAAAAAGTAGTTGTGGAAGTGTTGCCACAATGGAGTGAGAGCCAGAGTGGGAACTCTCAAACTTTGTTCAAGAGTATGGCTGAAAATCTGAAGATGAAGAGTTTGCAGCCCAGGATGTCTGGGCAGAGTGTTCTATTGGAAGGCAATCTCTAG

mRNA sequence

ATGGCTCTCAATTCCGTTTCCTTCGTCTGGAATGCAACTCCAAAATTGACTCCACCTACAACTCTTAATGATGTTCATTCGCCATCAATCTACCACTGCCTTCACAACGACAAACTCGGGCTCTATGATTGCTCTAGATCTAGGGTTTCCAGTTCAGTGAAATGGATGGTTAAATCAGGAAGCTGTAGGGGAGGGCAATCGGTTAGATGTGTTAATATAATTCAAGACATTCATTGTGATGTTGATGATGAGGTTTACATGAGGAGGTCTTTGGAGATTGCAAGGAAGGCAATTGGGCATACAAGCCCTAATCCCATGGTGGGATGTGTGATTGTGAAAAATGGGGAAATTGTTGGTGAAGGCTTTCATCCTAAAGCAGGGCAGCCTCATGCTGAGGTATTTGCTCTGCGAGAAGCTGGGAATTTGGCAGAGAATGCAACGGCATATGTGACTTTAGAACCATGCAATCACTATGGTAGAACTCCACCGTGTACAGAGGCTCTAGTAAAAGCCAAAGTGAGGAGGGTGGTGGTTGGCATGGTGGATCCCAATCCAATTGTTGCTTCCAAAGGCGTTCAACGATTAAGAGAGGCAGGAATTGATGTGACTGTGAGCATAGAAGAAGATTCCTGCAAAAAGCTTAATGAAGCATATATTCATCAAATCTTGACTGGGAAGCCTCTTCTTACCCTAAGGTACACCCTCTCTTTAAACGGTTGCTTTCTAGATCAGGTTGGGAACGGAGTTGTGGACGCTGGTGGCTACTATTCTCAACTATTACAAGAGTATACTGCTGTTCTAATTTCTCCTCCCTCATCATCTGAGGAGTTCGAAATCCCTGCATCCAAGGAACATGGAGCCAAGCAACCCCTTTGGATCATTCTATCGAGTCCCAACGGTTCGATCACTATTCCTCGCATTACGGATACAACTACGAAAGTAGTAATCTTAACAGACAAAGAAGTGGTGGTAGGCAAGGAAGGGATTGAAACGGTAGTTATGGATGAATTAAATTTGGGCAACATTCTAGATTACTGCCAGAGCCAAGGACTAAACAGTGTCCTGTGGGATGTGAGAGCAAAGTTGGGAATTCACGAACAACTTATGAAAGAGGGTATTGAGCAGAAATATTTGCAAAAAGTAGTTGTGGAAGTGTTGCCACAATGGAGTGAGAGCCAGAGTGGGAACTCTCAAACTTTGTTCAAGAGTATGGCTGAAAATCTGAAGATGAAGAGTTTGCAGCCCAGGATGTCTGGGCAGAGTGTTCTATTGGAAGGCAATCTCTAG

Coding sequence (CDS)

ATGGCTCTCAATTCCGTTTCCTTCGTCTGGAATGCAACTCCAAAATTGACTCCACCTACAACTCTTAATGATGTTCATTCGCCATCAATCTACCACTGCCTTCACAACGACAAACTCGGGCTCTATGATTGCTCTAGATCTAGGGTTTCCAGTTCAGTGAAATGGATGGTTAAATCAGGAAGCTGTAGGGGAGGGCAATCGGTTAGATGTGTTAATATAATTCAAGACATTCATTGTGATGTTGATGATGAGGTTTACATGAGGAGGTCTTTGGAGATTGCAAGGAAGGCAATTGGGCATACAAGCCCTAATCCCATGGTGGGATGTGTGATTGTGAAAAATGGGGAAATTGTTGGTGAAGGCTTTCATCCTAAAGCAGGGCAGCCTCATGCTGAGGTATTTGCTCTGCGAGAAGCTGGGAATTTGGCAGAGAATGCAACGGCATATGTGACTTTAGAACCATGCAATCACTATGGTAGAACTCCACCGTGTACAGAGGCTCTAGTAAAAGCCAAAGTGAGGAGGGTGGTGGTTGGCATGGTGGATCCCAATCCAATTGTTGCTTCCAAAGGCGTTCAACGATTAAGAGAGGCAGGAATTGATGTGACTGTGAGCATAGAAGAAGATTCCTGCAAAAAGCTTAATGAAGCATATATTCATCAAATCTTGACTGGGAAGCCTCTTCTTACCCTAAGGTACACCCTCTCTTTAAACGGTTGCTTTCTAGATCAGGTTGGGAACGGAGTTGTGGACGCTGGTGGCTACTATTCTCAACTATTACAAGAGTATACTGCTGTTCTAATTTCTCCTCCCTCATCATCTGAGGAGTTCGAAATCCCTGCATCCAAGGAACATGGAGCCAAGCAACCCCTTTGGATCATTCTATCGAGTCCCAACGGTTCGATCACTATTCCTCGCATTACGGATACAACTACGAAAGTAGTAATCTTAACAGACAAAGAAGTGGTGGTAGGCAAGGAAGGGATTGAAACGGTAGTTATGGATGAATTAAATTTGGGCAACATTCTAGATTACTGCCAGAGCCAAGGACTAAACAGTGTCCTGTGGGATGTGAGAGCAAAGTTGGGAATTCACGAACAACTTATGAAAGAGGGTATTGAGCAGAAATATTTGCAAAAAGTAGTTGTGGAAGTGTTGCCACAATGGAGTGAGAGCCAGAGTGGGAACTCTCAAACTTTGTTCAAGAGTATGGCTGAAAATCTGAAGATGAAGAGTTTGCAGCCCAGGATGTCTGGGCAGAGTGTTCTATTGGAAGGCAATCTCTAG

Protein sequence

MALNSVSFVWNATPKLTPPTTLNDVHSPSIYHCLHNDKLGLYDCSRSRVSSSVKWMVKSGSCRGGQSVRCVNIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKGVQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNGVVDAGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILSSPNGSITIPRITDTTTKVVILTDKEVVVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIHEQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQSVLLEGNL

Homology

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BLAST of Cla001222 vs. Swiss-Prot
Match: RIBD_ARATH (Riboflavin biosynthesis protein PYRD, chloroplastic OS=Arabidopsis thaliana GN=PYRD PE=1 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 3.3e-111
Identity = 206/357 (57.70%), Postives = 268/357 (75.07%), Query Frame = 1


Query: 80  DVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEVFALREA 139
           +VDD  YMR+ +E+A++AIG TSPNPMVGCVIVK+G+IVG+GFHPKAGQPHAEVFALR+A
Sbjct: 71  EVDDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKAGQPHAEVFALRDA 130

Query: 140 GNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKGVQRLREAG 199
           G LAENATAYV+LEPCNHYGRTPPCTEAL+KAKVRRVV+GMVDPNPIV S G+ RL++AG
Sbjct: 131 GELAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGISRLKDAG 190

Query: 200 IDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNGVVDAGGYYSQL 259
           IDVTVS+EE+ CKK+NE +IH++LTGKP L LRY++S+NGC LD++G G  D+GGYYS+L
Sbjct: 191 IDVTVSVEEELCKKMNEGFIHRMLTGKPFLALRYSMSVNGCLLDKIGQGASDSGGYYSKL 250

Query: 260 LQEYTAVLISPPSSSEEFEIPASKE--HGAKQPLWIILSSPNGSITI----PRITDTTTK 319
           LQEY A+++S  S S+E    +S+E  + + QP+ II++S      I      + ++  K
Sbjct: 251 LQEYDAIILS-SSLSDELSSISSQEAINVSIQPIQIIVASNAQQSHILASSHTVEESGPK 310

Query: 320 VVILTDKEVV----VGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIHEQLM 379
           VV+ T KE V    +   G+ETVV++++NL +ILDYC ++GL SVL D+R  +   E L+
Sbjct: 311 VVVFTAKESVAESGISSSGVETVVLEKINLDSILDYCYNRGLCSVLLDLRGNVKDLEVLL 370

Query: 380 KEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQSVLLEG 427
           ++G EQK LQKV++EVLP+WS       Q       E+  +K LQ +  G SVLLEG
Sbjct: 371 RDGFEQKLLQKVIIEVLPEWSTKD--ERQIASMKWLESKHVKDLQSKQLGGSVLLEG 424

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BLAST of Cla001222 vs. Swiss-Prot
Match: RIBD_MAIZE (Riboflavin biosynthesis protein PYRD, chloroplastic OS=Zea mays GN=PYRD PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.8e-99
Identity = 193/349 (55.30%), Postives = 245/349 (70.20%), Query Frame = 1


Query: 80  DVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEVFALREA 139
           D+DD  YMRR +E+ARKA GHTSPNPMVGCVIV++G +VGEGFHPKAGQPHAEVFALR+A
Sbjct: 45  DLDDAHYMRRCVELARKAAGHTSPNPMVGCVIVRDGRVVGEGFHPKAGQPHAEVFALRDA 104

Query: 140 GNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKGVQRLREAG 199
           GNLAENATAYV+LEPCNHYGRTPPCTEAL+ AKV+ VVVGM DPNPIVASKG+++L+ AG
Sbjct: 105 GNLAENATAYVSLEPCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGIEKLQGAG 164

Query: 200 IDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNGVVDAGGYYSQL 259
           I V V +EE  C+KLNEAYIH++LTGK   TLR TLS+NG   +Q+G G   +GGYYSQL
Sbjct: 165 ISVRVGVEEALCRKLNEAYIHRMLTGKAFATLRATLSMNGIITNQIGKGADQSGGYYSQL 224

Query: 260 LQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILSSPNGS-ITIPRIT-DTTTKVVIL 319
           ++EY  V+IS    ++   +P S+E G  QPL II++    S + IP ++ +  ++ ++L
Sbjct: 225 MKEYDGVIIS-SDLAKMSALPLSREAGTNQPLCIIIAQGESSRLHIPSLSQEHASRAIVL 284

Query: 320 TDKEVVVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIHEQLMKEGIEQKY 379
            D  V V   G+E  V  +++L +IL     +GL SVL D R        L+ +  E K 
Sbjct: 285 ADSPVTVEPAGVEVAVFRQIDLESILQLLAQRGLCSVLVDFREAGESFASLLNDFQEDKL 344

Query: 380 LQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQSVLLEG 427
           +QKVVVEVLP W  S  G S   F   +++  +K+L+ R    SVLLEG
Sbjct: 345 VQKVVVEVLPFWLAS-DGLSNLAFGG-SQSFPLKNLELRDVNGSVLLEG 390

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BLAST of Cla001222 vs. Swiss-Prot
Match: RIBD_SYNY3 (Riboflavin biosynthesis protein RibD OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ribD PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 8.9e-56
Identity = 134/362 (37.02%), Postives = 202/362 (55.80%), Query Frame = 1


Query: 81  VDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEVFALREAG 140
           + D+ +MRR L +A+ AIG T+PNP+VG VIV+  EIVG+GFHP+AGQPH E+FAL EAG
Sbjct: 2   ISDQTHMRRCLTLAKTAIGKTAPNPLVGSVIVQGDEIVGQGFHPQAGQPHGEIFALWEAG 61

Query: 141 NLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKGVQRLREAGI 200
           + A+ AT YV LEPCNH GRTPPCTEA+++A + +VVVGMVDPNP+VA KG+ RLR+AGI
Sbjct: 62  DRAKGATLYVNLEPCNHQGRTPPCTEAIIQAGIAKVVVGMVDPNPLVAGKGISRLRQAGI 121

Query: 201 DVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNG----VVDAGGYY 260
           +V V +EE++C++LNEA+  +I   +P    +Y ++L+G       +        A  + 
Sbjct: 122 EVKVGVEEEACQRLNEAFCFRIKHQRPFGIFKYAMTLDGKIATAQAHSSWVTSSSARHWV 181

Query: 261 SQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILS-SPNGSITIPRITDTTTKVV 320
            QL  +  AV+I   +   +  +  +   G   PL ++LS S +  I          K +
Sbjct: 182 HQLRSQCQAVIIGGNTVRRDNPLLTNHGVGEVNPLRVVLSRSLDLPIEAQLWDQDVAKTL 241

Query: 321 ILTDKEV------VVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIHEQLM 380
           ++T+K         + K  +ET+V+++L    +++    +    VLW+     GI   L 
Sbjct: 242 VITEKTCDRNTLSHLEKLEVETLVLEQLTPLAVMEELYQRNCLQVLWECG---GI---LA 301

Query: 381 KEGIEQKYLQKVVVEVLPQ---WSESQSGNSQTLFKSMAENLKMKSLQPRMSGQSVLLEG 429
            E I    +QKV   + P+      + +   +  F+ M + L +  L  +  G   L  G
Sbjct: 302 AEAIAMGTVQKVHAFLAPKIIGGVAAPTPVGELGFQQMTQALNLTDLHCQAIGPDWLFTG 357

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BLAST of Cla001222 vs. Swiss-Prot
Match: RIBD_AQUAE (Riboflavin biosynthesis protein RibD OS=Aquifex aeolicus (strain VF5) GN=ribD PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.3e-48
Identity = 116/352 (32.95%), Postives = 196/352 (55.68%), Query Frame = 1


Query: 83  DEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEVFALREAGNL 142
           D+ YM+ +L +A+K  G+T PNP VG V+VK G+IVG G+H KAG+PHAEV AL +AG  
Sbjct: 6   DKNYMKLALSLAKKRKGYTHPNPTVGAVVVKEGKIVGLGYHEKAGKPHAEVMALGQAGEK 65

Query: 143 AENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKGVQRLREAGIDV 202
           A+ AT YVTLEPC H+GRTPPCT+A++++ ++RVVV  +DPNP+++ KGV++LR AGI+V
Sbjct: 66  AKGATLYVTLEPCTHFGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVEKLRNAGIEV 125

Query: 203 TVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNG----VVDAGGYYSQ 262
            V + E+  ++LNE +   I   +P +TL++  +L+G      G+       ++      
Sbjct: 126 DVGVCEEEARELNEDFFTYITQERPYITLKWAQTLDGKLATLTGSSKWITSKESRKVAHI 185

Query: 263 LLQEYTAVLISPPS-SSEEFEIPASKEHGAKQPLWIILSSPNGSITIPRITDT-TTKVVI 322
           L +E TAVL+   +   ++  +        KQP+ IIL          ++ +T     ++
Sbjct: 186 LRREATAVLVGVNTVIKDDPHLTVRFVPTEKQPVRIILDPELEVPLSAKVLNTEEAPTIV 245

Query: 323 LTDKE----VVVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIHEQLMKEG 382
           +T KE      + ++G++ +++   NL NIL   +   +  ++  V          +KEG
Sbjct: 246 ITKKENEKAEKLKEKGVQVLILKGFNLKNILKKLKELEIMHLM--VEGGPRTLTSFLKEG 305

Query: 383 IEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQSVLL 425
               +  ++VV + P+             +S+ E+LK++  +    G+ +++
Sbjct: 306 ----FFDRIVVFIAPKIMGEGLSIGDLGIRSIEESLKVRKKKVENLGEDLVI 351

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BLAST of Cla001222 vs. Swiss-Prot
Match: RIBD_HAEIN (Riboflavin biosynthesis protein RibD OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ribD PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.3e-45
Identity = 103/232 (44.40%), Postives = 140/232 (60.34%), Query Frame = 1


Query: 83  DEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEVFALREAGNL 142
           D V+M+R+L++A K    T+PNP VGCV+VKNGEIVGEGFH KAGQPHAE  AL +AG  
Sbjct: 8   DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67

Query: 143 AENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKGVQRLREAGIDV 202
           A+ ATAYVTLEPC HYGRTPPC   L++A V +V+  M DPNP VA KG++ L +AGI+ 
Sbjct: 68  AKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127

Query: 203 TVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVG-----------NGVVD 262
           TV++  D  +K+N+ ++ ++  G P + L+  +SL+G      G           + V  
Sbjct: 128 TVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187

Query: 263 AGGYYSQLLQEYTAVLISPPSSSEEF-EIPAS-----KEHGAKQPLWIILSS 298
                S LL   T V+   PS +  + E P +     K+   +QP+ +IL S
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNVRWDEFPENLKTEYKKEWLRQPVRVILDS 239

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BLAST of Cla001222 vs. TrEMBL
Match: A0A0A0KCZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G003430 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 1.6e-213
Identity = 368/428 (85.98%), Postives = 398/428 (92.99%), Query Frame = 1


Query: 1   MALNSVSFVWNATPKLTPPTTLNDVHSPSIYHCLHNDKLGLYDCSRSRVSSSVKWMVKSG 60
           MALNS+SF WNATPKLTPPTTLNDVHSP IY+  HNDK  L DCSRSRVSSSV+W+VKSG
Sbjct: 1   MALNSLSFFWNATPKLTPPTTLNDVHSPLIYYRNHNDKFRLCDCSRSRVSSSVQWIVKSG 60

Query: 61  SCRGGQSVRCVNIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE 120
           SCRGG SVRCVN+IQ +HCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE
Sbjct: 61  SCRGGHSVRCVNVIQGVHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE 120

Query: 121 GFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGM 180
           GFHPKAGQPHAEVFALREAG+LAENATAYVTLEPCNHYGRTPPCTEAL+KAKV+RVVVGM
Sbjct: 121 GFHPKAGQPHAEVFALREAGSLAENATAYVTLEPCNHYGRTPPCTEALIKAKVKRVVVGM 180

Query: 181 VDPNPIVASKGVQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC 240
           VDPNPIVASKGVQRLR+AGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC
Sbjct: 181 VDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC 240

Query: 241 FLDQVGNGVVDAGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILSSPNG 300
           FLDQVG G  +AGGYYSQLLQEY AV+ISPPSSSEEFEIP+S EHGAKQPLWIILSSP+G
Sbjct: 241 FLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPDG 300

Query: 301 SITIPRITDTTTKVVILTDKEVVVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRA 360
            IT+PRITD TTKVVI T+KEVVV +  IETVV+D+LN+ NIL+YCQSQGLNSV+WDVRA
Sbjct: 301 LITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVRA 360

Query: 361 KLGIHEQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQ 420
           KLG+HE+L+KEGIE+K LQKVVVEVLPQWSESQ   S+T FKSMAENLK+K L+PRM G 
Sbjct: 361 KLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQ---SETWFKSMAENLKLKCLEPRMCGP 420

Query: 421 SVLLEGNL 429
           SV+LE NL
Sbjct: 421 SVVLEANL 425

[Close]

BLAST of Cla001222 vs. TrEMBL
Match: A0A067H5E0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014311mg PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 4.8e-125
Identity = 232/381 (60.89%), Postives = 295/381 (77.43%), Query Frame = 1


Query: 54  KWMVKSGSCRGGQSVRCVNIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVK 113
           K +  +  CRGG  +RC  +  +   D DD  YMRR +E+A KA+G TSPNPMVGCVIVK
Sbjct: 51  KSLTSTRKCRGGYRIRCGQVQNN---DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVK 110

Query: 114 NGEIVGEGFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKV 173
           +G+IVGEGFHPKAGQPHAEVFALR+AG LAE ATAYV+LEPCNHYGRTPPCTEAL+KAKV
Sbjct: 111 DGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKV 170

Query: 174 RRVVVGMVDPNPIVASKGVQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRY 233
           ++VVVGM+DPNPIV SKG++RLR+AGIDVTV +E++ CK+LNEA+IH+I+TGKP  TLRY
Sbjct: 171 KKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRY 230

Query: 234 TLSLNGCFLDQVGNGVVDAGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWI 293
           TLS+NG  LDQ+G GV ++GGYYSQLLQEY A+++S  SS++++ IPAS+E  A QP  I
Sbjct: 231 TLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAIILS-ASSTKKYSIPASQEPDANQPFRI 290

Query: 294 ILSSPNGS-ITIPRIT-DTTTKVVILTDKEVVV----GKEGIETVVMDELNLGNILDYCQ 353
           I  S + S I IP ++ ++++KV++ TD E+ V    G +GIETV + +LNL  +LDYC 
Sbjct: 291 ITVSNHASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCY 350

Query: 354 SQGLNSVLWDVRAKLGIHEQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAEN 413
           S G  SVL D+R   G  E L+KEGIEQ  LQK+VVEVLP W+ S  GN  TL  S+ + 
Sbjct: 351 SHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKR 410

Query: 414 LKMKSLQPRMSGQSVLLEGNL 429
           L +K+LQP+MS QS++LEG L
Sbjct: 411 LILKNLQPKMSSQSIVLEGYL 427

[Close]

BLAST of Cla001222 vs. TrEMBL
Match: V4U2N1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020258mg PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 4.8e-125
Identity = 232/381 (60.89%), Postives = 295/381 (77.43%), Query Frame = 1


Query: 54  KWMVKSGSCRGGQSVRCVNIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVK 113
           K +  +  CRGG  +RC  +  +   D DD  YMRR +E+A KA+G TSPNPMVGCVIVK
Sbjct: 51  KSLTSTRKCRGGYRIRCGQVQNN---DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVK 110

Query: 114 NGEIVGEGFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKV 173
           +G+IVGEGFHPKAGQPHAEVFALR+AG LAE ATAYV+LEPCNHYGRTPPCTEAL+KAKV
Sbjct: 111 DGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKV 170

Query: 174 RRVVVGMVDPNPIVASKGVQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRY 233
           ++VVVGM+DPNPIV SKG++RLR+AGIDVTV +E++ CK+LNEA+IH+I+TGKP  TLRY
Sbjct: 171 KKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRY 230

Query: 234 TLSLNGCFLDQVGNGVVDAGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWI 293
           TLS+NG  LDQ+G GV ++GGYYSQLLQEY A+++S  SS++++ IPAS+E  A QP  I
Sbjct: 231 TLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAIILS-ASSTKKYSIPASQEPDANQPFRI 290

Query: 294 ILSSPNGS-ITIPRIT-DTTTKVVILTDKEVVV----GKEGIETVVMDELNLGNILDYCQ 353
           I  S + S I IP ++ ++++KV++ TD E+ V    G +GIETV + +LNL  +LDYC 
Sbjct: 291 ITVSNHASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCY 350

Query: 354 SQGLNSVLWDVRAKLGIHEQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAEN 413
           S G  SVL D+R   G  E L+KEGIEQ  LQK+VVEVLP W+ S  GN  TL  S+ + 
Sbjct: 351 SHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKR 410

Query: 414 LKMKSLQPRMSGQSVLLEGNL 429
           L +K+LQP+MS QS++LEG L
Sbjct: 411 LILKNLQPKMSSQSIVLEGYL 427

[Close]

BLAST of Cla001222 vs. TrEMBL
Match: M5XGG9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020208mg PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 7.0e-124
Identity = 243/423 (57.45%), Postives = 312/423 (73.76%), Query Frame = 1


Query: 16  LTPPTTLNDVHSPSIYHCLHNDKLGLYDCSRSRVSSSVKWMVKSG----SCRGGQSVRCV 75
           LTPP       SPS    L +  L L   S+S   +S+K + KS     S  G   VRC 
Sbjct: 11  LTPPNV-----SPS--QQLSSKILRLNPNSKSGFCNSLKMVFKSPTGLRSHGGSVVVRCG 70

Query: 76  NIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHA 135
              Q+   D DD  YMRR +E+ARKAIG TSPNPMVGCVIVK+G++VGEGFHPKAGQPHA
Sbjct: 71  VAQQE---DTDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFHPKAGQPHA 130

Query: 136 EVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKG 195
           EVFALR+AG+LAENATAYV+LEPCNHYGRTPPC+EAL+KAKV+RVVVGMVDPNPIVASKG
Sbjct: 131 EVFALRDAGDLAENATAYVSLEPCNHYGRTPPCSEALIKAKVKRVVVGMVDPNPIVASKG 190

Query: 196 VQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNGVVD 255
           + RLR+AGI+VT  +EE+SCK+LNEAYIH +LTG P +T+RY++S+NG FLDQ+G GV  
Sbjct: 191 LDRLRDAGIEVTTGVEEESCKRLNEAYIHHMLTGNPFVTMRYSISVNGHFLDQLGEGVAK 250

Query: 256 AGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILSSPNGS-ITIPRIT-D 315
           AGGYYSQLLQEY A+++S  S  E   IP S+E GA QP+ IIL+  + S I IP +T +
Sbjct: 251 AGGYYSQLLQEYDAIILSSSSIIENASIPVSQEGGANQPVQIILARNSSSPIQIPSLTME 310

Query: 316 TTTKVVILTDKEVVVGKE----GIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIH 375
              K++I +DKE  V  E    GIETVV+D++NL  IL++C SQGL SVL D++  +G  
Sbjct: 311 PIGKLIIFSDKETTVELERAHTGIETVVLDQINLEAILEFCNSQGLCSVLLDLKGNIGDI 370

Query: 376 EQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQSVLLE 429
           E+L+++GIE+  LQK+V+EVLP W  +  GN     KS+ + L++K+L+P++S ++V+LE
Sbjct: 371 EELLQDGIEKNLLQKIVIEVLPLWEANDGGNFPIALKSLRKRLEVKNLKPKVSSENVVLE 423

[Close]

BLAST of Cla001222 vs. TrEMBL
Match: B9GQ87_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16020g PE=4 SV=2)

HSP 1 Score: 448.0 bits (1151), Expect = 1.3e-122
Identity = 246/422 (58.29%), Postives = 309/422 (73.22%), Query Frame = 1


Query: 18  PPTTLNDVHS----PSIYHCLHNDKLGLYDCSRSRVSSSVKWMVKSGSCRGGQSVRCVNI 77
           PPT LN   S    PS+    +   L L D SRS   + V  M  SG      +V CV  
Sbjct: 12  PPTPLNFSRSSRTLPSLASPQYPLNLTLRDHSRSGFFNPVNRMSSSGKHGILVTVSCV-A 71

Query: 78  IQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEV 137
            +    D DD  YMRR +E+ARKAIG TSPNPMVGCVIVK+G+IVGEGFHPKAGQPHAEV
Sbjct: 72  KEGGDDDKDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEV 131

Query: 138 FALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKGVQ 197
           FALR+A +LAENATAYV+LEPCNHYGRTPPC+EALVKAKV++VV+GM+DPNPIVAS+GVQ
Sbjct: 132 FALRDAEDLAENATAYVSLEPCNHYGRTPPCSEALVKAKVKKVVIGMIDPNPIVASRGVQ 191

Query: 198 RLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNGVVDAG 257
           RLR+AGI+V V +EE+ CK+LNEA+IH++LTG P +TLRY+LS+NG  ++Q+G GV D G
Sbjct: 192 RLRDAGINVVVGVEEELCKRLNEAFIHKMLTGSPFVTLRYSLSVNGHLVNQLGEGVTDTG 251

Query: 258 GYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILS-SPNGSITIPRIT-DTT 317
           GYYSQLLQEY AV++S  S +     PAS+E GA QPLWI+++  P+  I IP +T +  
Sbjct: 252 GYYSQLLQEYDAVILS-ASLTGSSPFPASQEPGANQPLWILMAGGPSSPIQIPLLTEEAA 311

Query: 318 TKVVILTDKEV----VVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIHEQ 377
           +KV I TDKE        K+GIETVV+D++NL  IL+YC+S+GL SVL D+R      E+
Sbjct: 312 SKVTIFTDKEASEEPETSKKGIETVVLDKINLNAILEYCKSRGLCSVLMDLRGSFVELEE 371

Query: 378 LMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSG-QSVLLEG 429
           L+K+G EQ  LQK+VVEVLP W ES   +S T  KS+   LK+ +LQP++SG QS++LEG
Sbjct: 372 LLKDGTEQNLLQKIVVEVLPFWDESSGLSSLTASKSIRRRLKVNNLQPKISGDQSIVLEG 431

[Close]

BLAST of Cla001222 vs. NCBI nr
Match: gi|659116788|ref|XP_008458260.1| (PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis melo])

HSP 1 Score: 766.9 bits (1979), Expect = 1.8e-218
Identity = 373/428 (87.15%), Postives = 404/428 (94.39%), Query Frame = 1


Query: 1   MALNSVSFVWNATPKLTPPTTLNDVHSPSIYHCLHNDKLGLYDCSRSRVSSSVKWMVKSG 60
           MALNS+SF WNATPKLTPPTTLND HSPSIY+C HNDKL L+DCSRSRVSSSV+WMVKSG
Sbjct: 1   MALNSLSFFWNATPKLTPPTTLNDAHSPSIYYCNHNDKLKLHDCSRSRVSSSVQWMVKSG 60

Query: 61  SCRGGQSVRCVNIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE 120
           SCRGG SVRCVN+IQ +HCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE
Sbjct: 61  SCRGGHSVRCVNVIQGVHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE 120

Query: 121 GFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGM 180
           GFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEAL+KAKV+RVVVGM
Sbjct: 121 GFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALIKAKVKRVVVGM 180

Query: 181 VDPNPIVASKGVQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC 240
           VDPNPIVASKGVQRLR+AGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC
Sbjct: 181 VDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC 240

Query: 241 FLDQVGNGVVDAGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILSSPNG 300
           FLDQVG G  +AGGYYSQLLQEY AV++SPPSSSEEFEIP+S EHGAKQPLWIILSSP+G
Sbjct: 241 FLDQVGKGAAEAGGYYSQLLQEYNAVIVSPPSSSEEFEIPSSNEHGAKQPLWIILSSPDG 300

Query: 301 SITIPRITDTTTKVVILTDKEVVVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRA 360
           SI +PRIT+ TTKVVILT+KE VV + GIETVV+D+LN+ NIL+YCQSQGLNSV+WDVRA
Sbjct: 301 SIPVPRITNPTTKVVILTNKEEVVSERGIETVVLDQLNMNNILNYCQSQGLNSVMWDVRA 360

Query: 361 KLGIHEQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQ 420
           KLG+HE+L+KEGIE+K LQKVVVEVLPQWSESQ   S+T FKSMAENLK+K L+PRM GQ
Sbjct: 361 KLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQ---SETWFKSMAENLKLKGLEPRMCGQ 420

Query: 421 SVLLEGNL 429
           SV+LEGNL
Sbjct: 421 SVVLEGNL 425

[Close]

BLAST of Cla001222 vs. NCBI nr
Match: gi|449441472|ref|XP_004138506.1| (PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis sativus])

HSP 1 Score: 750.0 bits (1935), Expect = 2.3e-213
Identity = 368/428 (85.98%), Postives = 398/428 (92.99%), Query Frame = 1


Query: 1   MALNSVSFVWNATPKLTPPTTLNDVHSPSIYHCLHNDKLGLYDCSRSRVSSSVKWMVKSG 60
           MALNS+SF WNATPKLTPPTTLNDVHSP IY+  HNDK  L DCSRSRVSSSV+W+VKSG
Sbjct: 1   MALNSLSFFWNATPKLTPPTTLNDVHSPLIYYRNHNDKFRLCDCSRSRVSSSVQWIVKSG 60

Query: 61  SCRGGQSVRCVNIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE 120
           SCRGG SVRCVN+IQ +HCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE
Sbjct: 61  SCRGGHSVRCVNVIQGVHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGE 120

Query: 121 GFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGM 180
           GFHPKAGQPHAEVFALREAG+LAENATAYVTLEPCNHYGRTPPCTEAL+KAKV+RVVVGM
Sbjct: 121 GFHPKAGQPHAEVFALREAGSLAENATAYVTLEPCNHYGRTPPCTEALIKAKVKRVVVGM 180

Query: 181 VDPNPIVASKGVQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC 240
           VDPNPIVASKGVQRLR+AGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC
Sbjct: 181 VDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC 240

Query: 241 FLDQVGNGVVDAGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILSSPNG 300
           FLDQVG G  +AGGYYSQLLQEY AV+ISPPSSSEEFEIP+S EHGAKQPLWIILSSP+G
Sbjct: 241 FLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPDG 300

Query: 301 SITIPRITDTTTKVVILTDKEVVVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRA 360
            IT+PRITD TTKVVI T+KEVVV +  IETVV+D+LN+ NIL+YCQSQGLNSV+WDVRA
Sbjct: 301 LITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVRA 360

Query: 361 KLGIHEQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQ 420
           KLG+HE+L+KEGIE+K LQKVVVEVLPQWSESQ   S+T FKSMAENLK+K L+PRM G 
Sbjct: 361 KLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQ---SETWFKSMAENLKLKCLEPRMCGP 420

Query: 421 SVLLEGNL 429
           SV+LE NL
Sbjct: 421 SVVLEANL 425

[Close]

BLAST of Cla001222 vs. NCBI nr
Match: gi|567905144|ref|XP_006445060.1| (hypothetical protein CICLE_v10020258mg [Citrus clementina])

HSP 1 Score: 456.1 bits (1172), Expect = 6.9e-125
Identity = 232/381 (60.89%), Postives = 295/381 (77.43%), Query Frame = 1


Query: 54  KWMVKSGSCRGGQSVRCVNIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVK 113
           K +  +  CRGG  +RC  +  +   D DD  YMRR +E+A KA+G TSPNPMVGCVIVK
Sbjct: 51  KSLTSTRKCRGGYRIRCGQVQNN---DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVK 110

Query: 114 NGEIVGEGFHPKAGQPHAEVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKV 173
           +G+IVGEGFHPKAGQPHAEVFALR+AG LAE ATAYV+LEPCNHYGRTPPCTEAL+KAKV
Sbjct: 111 DGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKV 170

Query: 174 RRVVVGMVDPNPIVASKGVQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRY 233
           ++VVVGM+DPNPIV SKG++RLR+AGIDVTV +E++ CK+LNEA+IH+I+TGKP  TLRY
Sbjct: 171 KKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRY 230

Query: 234 TLSLNGCFLDQVGNGVVDAGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWI 293
           TLS+NG  LDQ+G GV ++GGYYSQLLQEY A+++S  SS++++ IPAS+E  A QP  I
Sbjct: 231 TLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAIILS-ASSTKKYSIPASQEPDANQPFRI 290

Query: 294 ILSSPNGS-ITIPRIT-DTTTKVVILTDKEVVV----GKEGIETVVMDELNLGNILDYCQ 353
           I  S + S I IP ++ ++++KV++ TD E+ V    G +GIETV + +LNL  +LDYC 
Sbjct: 291 ITVSNHASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCY 350

Query: 354 SQGLNSVLWDVRAKLGIHEQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAEN 413
           S G  SVL D+R   G  E L+KEGIEQ  LQK+VVEVLP W+ S  GN  TL  S+ + 
Sbjct: 351 SHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKR 410

Query: 414 LKMKSLQPRMSGQSVLLEGNL 429
           L +K+LQP+MS QS++LEG L
Sbjct: 411 LILKNLQPKMSSQSIVLEGYL 427

[Close]

BLAST of Cla001222 vs. NCBI nr
Match: gi|596028672|ref|XP_007219384.1| (hypothetical protein PRUPE_ppa020208mg [Prunus persica])

HSP 1 Score: 452.2 bits (1162), Expect = 1.0e-123
Identity = 243/423 (57.45%), Postives = 312/423 (73.76%), Query Frame = 1


Query: 16  LTPPTTLNDVHSPSIYHCLHNDKLGLYDCSRSRVSSSVKWMVKSG----SCRGGQSVRCV 75
           LTPP       SPS    L +  L L   S+S   +S+K + KS     S  G   VRC 
Sbjct: 11  LTPPNV-----SPS--QQLSSKILRLNPNSKSGFCNSLKMVFKSPTGLRSHGGSVVVRCG 70

Query: 76  NIIQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHA 135
              Q+   D DD  YMRR +E+ARKAIG TSPNPMVGCVIVK+G++VGEGFHPKAGQPHA
Sbjct: 71  VAQQE---DTDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFHPKAGQPHA 130

Query: 136 EVFALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKG 195
           EVFALR+AG+LAENATAYV+LEPCNHYGRTPPC+EAL+KAKV+RVVVGMVDPNPIVASKG
Sbjct: 131 EVFALRDAGDLAENATAYVSLEPCNHYGRTPPCSEALIKAKVKRVVVGMVDPNPIVASKG 190

Query: 196 VQRLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNGVVD 255
           + RLR+AGI+VT  +EE+SCK+LNEAYIH +LTG P +T+RY++S+NG FLDQ+G GV  
Sbjct: 191 LDRLRDAGIEVTTGVEEESCKRLNEAYIHHMLTGNPFVTMRYSISVNGHFLDQLGEGVAK 250

Query: 256 AGGYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILSSPNGS-ITIPRIT-D 315
           AGGYYSQLLQEY A+++S  S  E   IP S+E GA QP+ IIL+  + S I IP +T +
Sbjct: 251 AGGYYSQLLQEYDAIILSSSSIIENASIPVSQEGGANQPVQIILARNSSSPIQIPSLTME 310

Query: 316 TTTKVVILTDKEVVVGKE----GIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIH 375
              K++I +DKE  V  E    GIETVV+D++NL  IL++C SQGL SVL D++  +G  
Sbjct: 311 PIGKLIIFSDKETTVELERAHTGIETVVLDQINLEAILEFCNSQGLCSVLLDLKGNIGDI 370

Query: 376 EQLMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSGQSVLLE 429
           E+L+++GIE+  LQK+V+EVLP W  +  GN     KS+ + L++K+L+P++S ++V+LE
Sbjct: 371 EELLQDGIEKNLLQKIVIEVLPLWEANDGGNFPIALKSLRKRLEVKNLKPKVSSENVVLE 423

[Close]

BLAST of Cla001222 vs. NCBI nr
Match: gi|743828777|ref|XP_011023353.1| (PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Populus euphratica])

HSP 1 Score: 449.1 bits (1154), Expect = 8.5e-123
Identity = 247/422 (58.53%), Postives = 310/422 (73.46%), Query Frame = 1


Query: 18  PPTTLNDVHS----PSIYHCLHNDKLGLYDCSRSRVSSSVKWMVKSGSCRGGQSVRCVNI 77
           PPT LN   S    PS+    +   L L D SRS   +SV  M  SG      +V CV  
Sbjct: 27  PPTPLNISRSSRTLPSLASPPYPLNLTLRDHSRSGFFNSVNRMSSSGKHGLLVTVSCVTK 86

Query: 78  IQDIHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEV 137
            +    D DD  YMRR +E+ARKAIG TSPNPMVGCVIVK+G+IVGEGFHPKAGQPHAEV
Sbjct: 87  -EGGDDDKDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEV 146

Query: 138 FALREAGNLAENATAYVTLEPCNHYGRTPPCTEALVKAKVRRVVVGMVDPNPIVASKGVQ 197
           FAL +AG+LAENATAYV+LEPCNHYGRTPPC+EALVKAKV++VV+GM+DPNPIVAS+GVQ
Sbjct: 147 FALSDAGDLAENATAYVSLEPCNHYGRTPPCSEALVKAKVKKVVIGMIDPNPIVASRGVQ 206

Query: 198 RLREAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGNGVVDAG 257
           RL++AGI+V V +EE+ CK+LNEA+IH++LTG P +TLRY+LS+NG  ++Q+G GV D+G
Sbjct: 207 RLKDAGINVVVGVEEELCKRLNEAFIHKMLTGSPFVTLRYSLSVNGHLVNQLGEGVTDSG 266

Query: 258 GYYSQLLQEYTAVLISPPSSSEEFEIPASKEHGAKQPLWIILS-SPNGSITIPRIT-DTT 317
           GYYSQLLQEY AV++S  S S     PAS+E GA QPLWI+++  P+  I IP  T +  
Sbjct: 267 GYYSQLLQEYDAVILS-ASLSGSSPFPASQEPGANQPLWILMAGGPSSRIQIPLPTEEAA 326

Query: 318 TKVVILTDKEV----VVGKEGIETVVMDELNLGNILDYCQSQGLNSVLWDVRAKLGIHEQ 377
           +KV I TDKE        K+GIETVV+D++NL  IL+YC+S+GL SVL D+R      E+
Sbjct: 327 SKVTIFTDKEASEEPETSKKGIETVVLDKINLNAILEYCKSRGLCSVLMDLRGSFVELEE 386

Query: 378 LMKEGIEQKYLQKVVVEVLPQWSESQSGNSQTLFKSMAENLKMKSLQPRMSG-QSVLLEG 429
           L+K+G EQ  LQK+VVEVLP W ES   +S T  KS+   LK+ +LQP++SG QS++LEG
Sbjct: 387 LLKDGTEQNLLQKIVVEVLPFWDESSGLSSLTASKSIRRRLKVNNLQPKISGDQSIVLEG 446

The following BLAST results are available for this feature:

BLAST of Cla001222 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIBD_ARATH	3.3e-111	57.70	Riboflavin biosynthesis protein PYRD, chloroplastic OS=Arabidopsis thaliana GN=P...	[more]
RIBD_MAIZE	3.8e-99	55.30	Riboflavin biosynthesis protein PYRD, chloroplastic OS=Zea mays GN=PYRD PE=2 SV=...	[more]
RIBD_SYNY3	8.9e-56	37.02	Riboflavin biosynthesis protein RibD OS=Synechocystis sp. (strain PCC 6803 / Kaz...	[more]
RIBD_AQUAE	5.3e-48	32.95	Riboflavin biosynthesis protein RibD OS=Aquifex aeolicus (strain VF5) GN=ribD PE...	[more]
RIBD_HAEIN	9.3e-45	44.40	Riboflavin biosynthesis protein RibD OS=Haemophilus influenzae (strain ATCC 5190...	[more]

BLAST of Cla001222 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCZ2_CUCSA	1.6e-213	85.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G003430 PE=4 SV=1	[more]
A0A067H5E0_CITSI	4.8e-125	60.89	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014311mg PE=4 SV=1	[more]
V4U2N1_9ROSI	4.8e-125	60.89	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020258mg PE=4 SV=1	[more]
M5XGG9_PRUPE	7.0e-124	57.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020208mg PE=4 SV=1	[more]
B9GQ87_POPTR	1.3e-122	58.29	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16020g PE=4 SV=2	[more]

BLAST of Cla001222 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116788\|ref\|XP_008458260.1\|	1.8e-218	87.15	PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis melo]	[more]
gi\|449441472\|ref\|XP_004138506.1\|	2.3e-213	85.98	PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis sativus]	[more]
gi\|567905144\|ref\|XP_006445060.1\|	6.9e-125	60.89	hypothetical protein CICLE_v10020258mg [Citrus clementina]	[more]
gi\|596028672\|ref\|XP_007219384.1\|	1.0e-123	57.45	hypothetical protein PRUPE_ppa020208mg [Prunus persica]	[more]
gi\|743828777\|ref\|XP_011023353.1\|	8.5e-123	58.53	PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Populus euphrati...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002125	CMP_dCMP_dom
IPR004794	Eubact_RibD
IPR016192	APOBEC/CMP_deaminase_Zn-bd
IPR016193	Cytidine_deaminase-like
IPR024072	DHFR-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0008835	diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
GO:0016787	hydrolase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009231	riboflavin biosynthetic process
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009231	riboflavin biosynthetic process
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008835	diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla001222	Cla001222	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla001222	Cla001222.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla001222.1.cds4	Cla001222.1.cds4	CDS
Cla001222.1.cds3	Cla001222.1.cds3	CDS
Cla001222.1.cds2	Cla001222.1.cds2	CDS
Cla001222.1.cds1	Cla001222.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PFAM	PF00383	dCMP_cyt_deam_1	coord: 83..180 score: 5.3
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PROFILE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 81..203 score: 26
IPR004794	Riboflavin biosynthesis protein RibD	TIGRFAMs	TIGR00326	TIGR00326	coord: 87..423 score: 8.5
IPR016192	APOBEC/CMP deaminase, zinc-binding	PROSITE	PS00903	CYT_DCMP_DEAMINASES_1	coord: 130..168 scor
IPR016193	Cytidine deaminase-like	unknown	SSF53927	Cytidine deaminase-like	coord: 83..221 score: 1.42
IPR024072	Dihydrofolate reductase-like domain	GENE3D	G3DSA:3.40.430.10		coord: 208..356 score: 1.7
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 82..207 score: 2.9
None	No IPR available	PANTHER	PTHR11079	CYTOSINE DEAMINASE	coord: 82..269 score: 1.9
None	No IPR available	PANTHER	PTHR11079:SF10	RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBD	coord: 82..269 score: 1.9